Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g47542 |
| pyrus_communis | pycom03g14340 |
| rosa_laevigata | RLG00000021637 |
| rosa_roxburghii | Rroxscaffold_2G00084690 |
| rosa_samantha | Rh2AG590700 Rh2DG613500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 155, 246 |
| AclWI | GGATC | 1 cut(s) | 257 |
| AfaI | GTAC | 1 cut(s) | 15 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 191 |
| AlwI | GGATC | 1 cut(s) | 257 |
| AoxI | GGCC | 1 cut(s) | 182 |
| AspLEI | GCGC | 1 cut(s) | 293 |
| AsuHPI | GGTGA | 1 cut(s) | 66 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 38 |
| BccI | CCATC | 2 cut(s) | 4, 209 |
| BclI | TGATCA | 1 cut(s) | 166 |
| BfaI | CTAG | 2 cut(s) | 102, 240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 143 |
| BsaJI | CCNNGG | 1 cut(s) | 286 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 189, 219 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 191 |
| Bse1I | ACTGG | 1 cut(s) | 275 |
| BseDI | CCNNGG | 1 cut(s) | 286 |
| BseGI | GGATG | 1 cut(s) | 220 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 191 |
| BseNI | ACTGG | 1 cut(s) | 275 |
| BshFI | GGCC | 1 cut(s) | 184 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 191 |
| BsmI | GAATGC | 1 cut(s) | 293 |
| BsnI | GGCC | 1 cut(s) | 184 |
| Bsp143I | GATC | 2 cut(s) | 166, 249 |
| Bsp19I | CCATGG | 1 cut(s) | 286 |
| BspACI | CCGC | 2 cut(s) | 155, 246 |
| BspANI | GGCC | 1 cut(s) | 184 |
| BspHI | TCATGA | 1 cut(s) | 6 |
| BspPI | GGATC | 1 cut(s) | 257 |
| BsrI | ACTGG | 1 cut(s) | 275 |
| BssECI | CCNNGG | 1 cut(s) | 286 |
| BssMI | GATC | 2 cut(s) | 166, 249 |
| BssT1I | CCWWGG | 1 cut(s) | 286 |
| Bst6I | CTCTTC | 1 cut(s) | 51 |
| BstDEI | CTNAG | 2 cut(s) | 143, 300 |
| BstDSI | CCRYGG | 1 cut(s) | 286 |
| BstF5I | GGATG | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 293 |
| BstKTI | GATC | 2 cut(s) | 169, 252 |
| BstMBI | GATC | 2 cut(s) | 166, 249 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 98 |
| BsuRI | GGCC | 1 cut(s) | 184 |
| BtgI | CCRYGG | 1 cut(s) | 286 |
| BtsCI | GGATG | 1 cut(s) | 220 |
| CciI | TCATGA | 1 cut(s) | 6 |
| CfoI | GCGC | 1 cut(s) | 293 |
| Csp6I | GTAC | 1 cut(s) | 14 |
| CviAII | CATG | 3 cut(s) | 7, 108, 287 |
| CviJI | RGCY | 4 cut(s) | 130, 147, 184, 221 |
| CviKI_1 | RGCY | 4 cut(s) | 130, 147, 184, 221 |
| CviQI | GTAC | 1 cut(s) | 14 |
| DdeI | CTNAG | 2 cut(s) | 143, 300 |
| DpnI | GATC | 2 cut(s) | 168, 251 |
| DpnII | GATC | 2 cut(s) | 166, 249 |
| Eam1104I | CTCTTC | 1 cut(s) | 51 |
| EarI | CTCTTC | 1 cut(s) | 51 |
| Eco130I | CCWWGG | 1 cut(s) | 286 |
| EcoT14I | CCWWGG | 1 cut(s) | 286 |
| ErhI | CCWWGG | 1 cut(s) | 286 |
| FaeI | CATG | 3 cut(s) | 10, 111, 290 |
| FaiI | YATR | 3 cut(s) | 8, 109, 288 |
| FatI | CATG | 3 cut(s) | 6, 107, 286 |
| FauI | CCCGC | 1 cut(s) | 239 |
| FbaI | TGATCA | 1 cut(s) | 166 |
| FokI | GGATG | 1 cut(s) | 227 |
| FspBI | CTAG | 2 cut(s) | 102, 240 |
| GlaI | GCGC | 1 cut(s) | 292 |
| HaeIII | GGCC | 1 cut(s) | 184 |
| HhaI | GCGC | 1 cut(s) | 293 |
| Hin1II | CATG | 3 cut(s) | 10, 111, 290 |
| Hin6I | GCGC | 1 cut(s) | 291 |
| HinP1I | GCGC | 1 cut(s) | 291 |
| HinfI | GANTC | 2 cut(s) | 68, 259 |
| HphI | GGTGA | 1 cut(s) | 66 |
| Hpy188I | TCNGA | 2 cut(s) | 171, 254 |
| Hpy188III | TCNNGA | 3 cut(s) | 7, 28, 266 |
| HpyAV | CCTTC | 2 cut(s) | 184, 196 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 98 |
| HpyF3I | CTNAG | 2 cut(s) | 143, 300 |
| Hsp92II | CATG | 3 cut(s) | 10, 111, 290 |
| HspAI | GCGC | 1 cut(s) | 291 |
| Ksp22I | TGATCA | 1 cut(s) | 166 |
| Kzo9I | GATC | 2 cut(s) | 166, 249 |
| LpnPI | CCDG | 4 cut(s) | 13, 78, 177, 256 |
| MaeI | CTAG | 2 cut(s) | 102, 240 |
| MaeIII | GTNAC | 1 cut(s) | 266 |
| MalI | GATC | 2 cut(s) | 168, 251 |
| MboI | GATC | 2 cut(s) | 166, 249 |
| MboII | GAAGA | 3 cut(s) | 38, 128, 254 |
| MlyI | GAGTC | 1 cut(s) | 77 |
| MnlI | CCTC | 1 cut(s) | 174 |
| MseI | TTAA | 2 cut(s) | 125, 150 |
| Mva1269I | GAATGC | 1 cut(s) | 293 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 98 |
| NcoI | CCATGG | 1 cut(s) | 286 |
| NdeII | GATC | 2 cut(s) | 166, 249 |
| NlaIII | CATG | 3 cut(s) | 10, 111, 290 |
| NmuCI | GTSAC | 1 cut(s) | 266 |
| PagI | TCATGA | 1 cut(s) | 6 |
| PctI | GAATGC | 1 cut(s) | 293 |
| PfeI | GAWTC | 1 cut(s) | 259 |
| PleI | GAGTC | 1 cut(s) | 76 |
| PpsI | GAGTC | 1 cut(s) | 76 |
| RsaI | GTAC | 1 cut(s) | 15 |
| RsaNI | GTAC | 1 cut(s) | 14 |
| SaqAI | TTAA | 2 cut(s) | 125, 150 |
| Sau3AI | GATC | 2 cut(s) | 166, 249 |
| SchI | GAGTC | 1 cut(s) | 77 |
| SetI | ASST | 4 cut(s) | 64, 144, 207, 313 |
| SsiI | CCGC | 2 cut(s) | 155, 246 |
| SspI | AATATT | 1 cut(s) | 122 |
| SspMI | CTAG | 2 cut(s) | 102, 240 |
| StyI | CCWWGG | 1 cut(s) | 286 |
| TaqI | TCGA | 1 cut(s) | 225 |
| TfiI | GAWTC | 1 cut(s) | 259 |
| Tru1I | TTAA | 2 cut(s) | 125, 150 |
| Tru9I | TTAA | 2 cut(s) | 125, 150 |
| TseFI | GTSAC | 1 cut(s) | 266 |
| Tsp45I | GTSAC | 1 cut(s) | 266 |
| XspI | CTAG | 2 cut(s) | 102, 240 |