Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0005033.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00132540 |
| rosa_rugosa | Rorug04G0351300 |
| rosa_samantha | Rh2BG237300 Rh2CG228500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 227 |
| AclWI | GGATC | 1 cut(s) | 341 |
| AcsI | RAATTY | 1 cut(s) | 62 |
| AgsI | TTSAA | 3 cut(s) | 38, 68, 148 |
| AluBI | AGCT | 3 cut(s) | 56, 103, 303 |
| AluI | AGCT | 3 cut(s) | 56, 103, 303 |
| Alw21I | GWGCWC | 1 cut(s) | 305 |
| AlwI | GGATC | 1 cut(s) | 341 |
| AoxI | GGCC | 1 cut(s) | 90 |
| ApoI | RAATTY | 1 cut(s) | 62 |
| AspS9I | GGNCC | 1 cut(s) | 229 |
| AsuHPI | GGTGA | 1 cut(s) | 302 |
| AvaII | GGWCC | 1 cut(s) | 229 |
| BanII | GRGCYC | 1 cut(s) | 305 |
| Bbv12I | GWGCWC | 1 cut(s) | 305 |
| BbvCI | CCTCAGC | 1 cut(s) | 57 |
| BccI | CCATC | 1 cut(s) | 319 |
| BfaI | CTAG | 1 cut(s) | 123 |
| Bme18I | GGWCC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 1 cut(s) | 229 |
| BmsI | GCATC | 2 cut(s) | 166, 214 |
| Bpu10I | CCTNAGC | 1 cut(s) | 57 |
| BseGI | GGATG | 4 cut(s) | 14, 229, 318, 330 |
| BseMII | CTCAG | 1 cut(s) | 48 |
| BshFI | GGCC | 1 cut(s) | 92 |
| BsiHKAI | GWGCWC | 1 cut(s) | 305 |
| BsnI | GGCC | 1 cut(s) | 92 |
| Bsp1286I | GDGCHC | 1 cut(s) | 305 |
| Bsp143I | GATC | 1 cut(s) | 333 |
| BspACI | CCGC | 1 cut(s) | 227 |
| BspANI | GGCC | 1 cut(s) | 92 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| BspPI | GGATC | 1 cut(s) | 341 |
| BssMI | GATC | 1 cut(s) | 333 |
| BstDEI | CTNAG | 1 cut(s) | 57 |
| BstF5I | GGATG | 4 cut(s) | 14, 229, 318, 330 |
| BstKTI | GATC | 1 cut(s) | 336 |
| BstMBI | GATC | 1 cut(s) | 333 |
| BstNSI | RCATGY | 1 cut(s) | 143 |
| BsuRI | GGCC | 1 cut(s) | 92 |
| BtgZI | GCGATG | 1 cut(s) | 180 |
| BtsCI | GGATG | 4 cut(s) | 14, 229, 318, 330 |
| Cfr13I | GGNCC | 1 cut(s) | 229 |
| CviAII | CATG | 2 cut(s) | 134, 140 |
| CviJI | RGCY | 5 cut(s) | 56, 92, 103, 122, 303 |
| CviKI_1 | RGCY | 5 cut(s) | 56, 92, 103, 122, 303 |
| DdeI | CTNAG | 1 cut(s) | 57 |
| DpnI | GATC | 1 cut(s) | 335 |
| DpnII | GATC | 1 cut(s) | 333 |
| Ecl136II | GAGCTC | 1 cut(s) | 303 |
| Eco147I | AGGCCT | 1 cut(s) | 92 |
| Eco24I | GRGCYC | 1 cut(s) | 305 |
| Eco47I | GGWCC | 1 cut(s) | 229 |
| Eco53kI | GAGCTC | 1 cut(s) | 303 |
| EcoICRI | GAGCTC | 1 cut(s) | 303 |
| EcoT38I | GRGCYC | 1 cut(s) | 305 |
| FaeI | CATG | 2 cut(s) | 137, 143 |
| FaiI | YATR | 5 cut(s) | 24, 135, 141, 297, 299 |
| FatI | CATG | 2 cut(s) | 133, 139 |
| FokI | GGATG | 4 cut(s) | 21, 236, 325, 337 |
| FriOI | GRGCYC | 1 cut(s) | 305 |
| FspBI | CTAG | 1 cut(s) | 123 |
| HaeIII | GGCC | 1 cut(s) | 92 |
| Hin1II | CATG | 2 cut(s) | 137, 143 |
| HinfI | GANTC | 1 cut(s) | 130 |
| HphI | GGTGA | 1 cut(s) | 302 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 3 cut(s) | 78, 324, 333 |
| Hpy188III | TCNNGA | 1 cut(s) | 232 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| HpyAV | CCTTC | 1 cut(s) | 208 |
| HpyF3I | CTNAG | 1 cut(s) | 57 |
| Hsp92II | CATG | 2 cut(s) | 137, 143 |
| Kzo9I | GATC | 1 cut(s) | 333 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| LpnPI | CCDG | 3 cut(s) | 245, 258, 273 |
| LweI | GCATC | 2 cut(s) | 166, 214 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MalI | GATC | 1 cut(s) | 335 |
| MboI | GATC | 1 cut(s) | 333 |
| MhlI | GDGCHC | 1 cut(s) | 305 |
| MluCI | AATT | 4 cut(s) | 62, 68, 149, 181 |
| MmeI | TCCRAC | 1 cut(s) | 302 |
| MnlI | CCTC | 4 cut(s) | 52, 186, 214, 249 |
| MseI | TTAA | 2 cut(s) | 27, 87 |
| MslI | CAYNNNNRTG | 2 cut(s) | 138, 288 |
| NdeII | GATC | 1 cut(s) | 333 |
| NlaIII | CATG | 2 cut(s) | 137, 143 |
| NspI | RCATGY | 1 cut(s) | 143 |
| PceI | AGGCCT | 1 cut(s) | 92 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| Psp124BI | GAGCTC | 1 cut(s) | 305 |
| PspPI | GGNCC | 1 cut(s) | 229 |
| RseI | CAYNNNNRTG | 2 cut(s) | 138, 288 |
| SacI | GAGCTC | 1 cut(s) | 305 |
| SaqAI | TTAA | 2 cut(s) | 27, 87 |
| Sau3AI | GATC | 1 cut(s) | 333 |
| Sau96I | GGNCC | 1 cut(s) | 229 |
| SduI | GDGCHC | 1 cut(s) | 305 |
| SetI | ASST | 5 cut(s) | 58, 105, 219, 292, 305 |
| SfaNI | GCATC | 2 cut(s) | 166, 214 |
| SgeI | CNNG | 9 cut(s) | 17, 47, 53, 135, 146, 152, 244, 285, 300 |
| SinI | GGWCC | 1 cut(s) | 229 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 138, 288 |
| Sse9I | AATT | 4 cut(s) | 62, 68, 149, 181 |
| SseBI | AGGCCT | 1 cut(s) | 92 |
| SsiI | CCGC | 1 cut(s) | 227 |
| SspMI | CTAG | 1 cut(s) | 123 |
| SstI | GAGCTC | 1 cut(s) | 305 |
| StuI | AGGCCT | 1 cut(s) | 92 |
| TaqI | TCGA | 1 cut(s) | 185 |
| TasI | AATT | 4 cut(s) | 62, 68, 149, 181 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| Tru1I | TTAA | 2 cut(s) | 27, 87 |
| Tru9I | TTAA | 2 cut(s) | 27, 87 |
| TspDTI | ATGAA | 1 cut(s) | 122 |
| VpaK11BI | GGWCC | 1 cut(s) | 229 |
| XapI | RAATTY | 1 cut(s) | 62 |
| XceI | RCATGY | 1 cut(s) | 143 |
| XspI | CTAG | 1 cut(s) | 123 |