Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0005033.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00132540 |
| rosa_rugosa | Rorug04G0351300 |
| rosa_samantha | Rh2BG237300 Rh2CG228500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 221 |
| AfaI | GTAC | 1 cut(s) | 53 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 93 |
| AgsI | TTSAA | 1 cut(s) | 142 |
| AluBI | AGCT | 1 cut(s) | 40 |
| AluI | AGCT | 1 cut(s) | 40 |
| AsuHPI | GGTGA | 1 cut(s) | 47 |
| AxyI | CCTNAGG | 1 cut(s) | 11 |
| BccI | CCATC | 1 cut(s) | 56 |
| BclI | TGATCA | 1 cut(s) | 42 |
| BfaI | CTAG | 3 cut(s) | 29, 117, 226 |
| BmsI | GCATC | 3 cut(s) | 67, 160, 208 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 93 |
| Bse118I | RCCGGY | 1 cut(s) | 32 |
| Bse21I | CCTNAGG | 1 cut(s) | 11 |
| BseGI | GGATG | 3 cut(s) | 67, 82, 223 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 93 |
| BsiSI | CCGG | 1 cut(s) | 33 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 93 |
| Bsp143I | GATC | 1 cut(s) | 42 |
| BspACI | CCGC | 1 cut(s) | 221 |
| BsrFI | RCCGGY | 1 cut(s) | 32 |
| BssAI | RCCGGY | 1 cut(s) | 32 |
| BssMI | GATC | 1 cut(s) | 42 |
| BstDEI | CTNAG | 1 cut(s) | 11 |
| BstF5I | GGATG | 3 cut(s) | 67, 82, 223 |
| BstKTI | GATC | 1 cut(s) | 45 |
| BstMBI | GATC | 1 cut(s) | 42 |
| BstNSI | RCATGY | 1 cut(s) | 137 |
| Bsu36I | CCTNAGG | 1 cut(s) | 11 |
| BtgZI | GCGATG | 1 cut(s) | 174 |
| BtsCI | GGATG | 3 cut(s) | 67, 82, 223 |
| Cfr10I | RCCGGY | 1 cut(s) | 32 |
| Csp6I | GTAC | 1 cut(s) | 52 |
| CviAII | CATG | 2 cut(s) | 128, 134 |
| CviJI | RGCY | 5 cut(s) | 32, 40, 86, 97, 116 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 40, 86, 97, 116 |
| CviQI | GTAC | 1 cut(s) | 52 |
| DdeI | CTNAG | 1 cut(s) | 11 |
| DpnI | GATC | 1 cut(s) | 44 |
| DpnII | GATC | 1 cut(s) | 42 |
| Eco81I | CCTNAGG | 1 cut(s) | 11 |
| FaeI | CATG | 2 cut(s) | 131, 137 |
| FaiI | YATR | 2 cut(s) | 129, 135 |
| FatI | CATG | 2 cut(s) | 127, 133 |
| FbaI | TGATCA | 1 cut(s) | 42 |
| FokI | GGATG | 2 cut(s) | 74, 89 |
| FspBI | CTAG | 3 cut(s) | 29, 117, 226 |
| HapII | CCGG | 1 cut(s) | 33 |
| Hin1II | CATG | 2 cut(s) | 131, 137 |
| HinfI | GANTC | 1 cut(s) | 124 |
| HpaII | CCGG | 1 cut(s) | 33 |
| HphI | GGTGA | 1 cut(s) | 47 |
| Hpy166II | GTNNAC | 1 cut(s) | 166 |
| Hpy188III | TCNNGA | 1 cut(s) | 46 |
| Hpy8I | GTNNAC | 1 cut(s) | 166 |
| HpyAV | CCTTC | 1 cut(s) | 202 |
| HpyCH4IV | ACGT | 1 cut(s) | 54 |
| HpyF3I | CTNAG | 1 cut(s) | 11 |
| HpySE526I | ACGT | 1 cut(s) | 54 |
| Hsp92II | CATG | 2 cut(s) | 131, 137 |
| Ksp22I | TGATCA | 1 cut(s) | 42 |
| Kzo9I | GATC | 1 cut(s) | 42 |
| LpnPI | CCDG | 1 cut(s) | 46 |
| LweI | GCATC | 3 cut(s) | 67, 160, 208 |
| MaeI | CTAG | 3 cut(s) | 29, 117, 226 |
| MaeII | ACGT | 1 cut(s) | 54 |
| MalI | GATC | 1 cut(s) | 44 |
| MboI | GATC | 1 cut(s) | 42 |
| MluCI | AATT | 3 cut(s) | 67, 143, 175 |
| MnlI | CCTC | 5 cut(s) | 42, 52, 67, 180, 208 |
| MslI | CAYNNNNRTG | 1 cut(s) | 132 |
| MspI | CCGG | 1 cut(s) | 33 |
| NdeII | GATC | 1 cut(s) | 42 |
| NlaIII | CATG | 2 cut(s) | 131, 137 |
| NspI | RCATGY | 1 cut(s) | 137 |
| PfeI | GAWTC | 1 cut(s) | 124 |
| RsaI | GTAC | 1 cut(s) | 53 |
| RsaNI | GTAC | 1 cut(s) | 52 |
| RseI | CAYNNNNRTG | 1 cut(s) | 132 |
| Sau3AI | GATC | 1 cut(s) | 42 |
| SetI | ASST | 4 cut(s) | 42, 53, 57, 213 |
| SfaNI | GCATC | 3 cut(s) | 67, 160, 208 |
| SgeI | CNNG | 7 cut(s) | 41, 45, 58, 85, 129, 140, 146 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 132 |
| Sse9I | AATT | 3 cut(s) | 67, 143, 175 |
| SsiI | CCGC | 1 cut(s) | 221 |
| SspMI | CTAG | 3 cut(s) | 29, 117, 226 |
| TaiI | ACGT | 1 cut(s) | 57 |
| TaqI | TCGA | 1 cut(s) | 179 |
| TasI | AATT | 3 cut(s) | 67, 143, 175 |
| TfiI | GAWTC | 1 cut(s) | 124 |
| TspDTI | ATGAA | 1 cut(s) | 116 |
| XceI | RCATGY | 1 cut(s) | 137 |
| XspI | CTAG | 3 cut(s) | 29, 117, 226 |