Rh2CG008900

FAD binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0014340
Physical Location & Seq
Forward (+)
760002 .. 765400
5399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG008900.1

Sequence Viewer

Length: 2223 bp
ATGTCAGTCCTTCCCTCCAAGTTTGGCTCTCTCCACCTCCATCTCCTCCGCCCTCCAAACCCAAACCCTAACCCTAGCCCTCATCCTCGCCGCCACACACTCAAGATCTCCAGCGGCAAGAGGTCCGGCAGGCAGAGATACCCGTCGGAGAGGAAGGTGCTCAAGTTGAAGCACAAGGATATCGTCGGGAACGTCAAGAACAAATACGAGGGCATTTGGAGGCTCTCCAAGCTCGGAGTTCCGGTCGACCGTGACCCCGGAAAGGACTTCCTCGGCGTCTCCCAGAGCTTGCTTGAAGAAATTGCCAAAGTGCTCGAGTTTCCGGTTGCTTCAATGCTGCCCTCGGAGGCCTTCACCGTGGTTCGGAAATCTTTTGATGCAAGGAAGAGGTTGAAAGAACCAAAATTCGTTTACATAGTGGAAATGGATGTTGATAAGCTATTGAGTTTAGAGCCTCGTGCTTGGGACTTCATTTCGGAGTTGGAGCCCAAAGTTGGGCTGGTAGAACACATGCCTCAAGCAAAGATATCTGGAGATTTGACGAGTATTATACACGGGTTAAAAGAAGTGCATCAAAGTTCAGTTTCCGGAGAAAGTGGAAATACAATGCTGAATGGGTCTCAAGGATCGTACAAATTTCCAACGGCTAGAAAACCCAAGATTGCGGTAGTGGGCAGTGGACCATCTGGGCTGTTTGCTGCCCTTGTTCTTGCGGAATTTGGTGCAGATGTCACCGTAATAGAAAGAGGTCAGCCTGTGGAACAGAGGGGGCGTGACATTGGTGCTCTGGCTGTCCGTCGGATCTTGCAGACAGAAAGCAATTTCTGCTTTGGAGAGGGTGGTGCAGGTACCTGGAGTGATGGAAAGCTGGTGACCAGGATTGGAAGAAACAGTGGGAGTGTTTTGGCGGTTATGGAAACTTTAGTTCAATTTGGAGCTCCAGAAGGAATTTTGGTTAACGGAAAGCCTCATTTGGGAACAGATAAATTGGTTCCACTACTTCGCAATTTTCGGCAGCATCTACTAAAGCTGGGTGTGACCATCAAGTTTGGGACAAGGGTTGATGATCTCCTTGTAGATAATGAACAAGTTGTAGGTGTCAGAGTTTCTGATTCAGTCGACAGGTTACAGTCTAGTAGCAAGAAATGGGAGTACGATGCTGTTGTTCTGGCTGTTGGACATTCTGCACGGGATCTTTATCAAACACTTCTATCTCATAACATTGAGTTGATCCCAAAAGATTTTGCTGTTGGCTTGCGGATTGAGCATCCTCAAGAAGTTGTAAACAGCTTACAGTATTCTGGATTGGCAACTGAGGTTTGCAGAGGACGCGGTAAAGTACCAGTGGCAGATTACAAGGTTGCAAAGTATGTAAGTGGAGAGAACAGGGCTGAACCTTTGCATGCAACAAGTCGAAGCTGCTATTCCTTCTGTATGTGTCCTGGTGGTCAGGTTGTTCTTACAAGTACAAATCCATCTGAAATCTGTGTCAATGGCATGTCATTTTCTCGACGTGACTCAAGGTGGGCAAATGCTGCACTCGTTGTGACCGTCTCAACAAAAGATTTTGGTGCATTGAATCTCCATGGACCTCTAGCAGGGGTTGAGTTTCAGAGAGAATTTGAGCAAAGAGCGGCAAGAATGGGAGGTGGAAATTTTGTGGTGCCTGTGCAGACAGTTACAGATTTTATGGACAATAAATTATCAGTAACATCTGTGCCACAGTCAAGTTATCGATTAGGAGTGAAGGCAGCAAATCTTCACAAGTTATTTCCTGATTATGTAACAGAGACTTTGCAGCAGTCAATCTCAGCATTTGACAAAGAGGTTTTGAATTCTCTTTACTTGTTATTATTGACCCTCACTGTCCGTTTATACCTAATGTACTGTTCCGCGTATTTGTTACTAATAGATTTTTGTTTTCTTGAAATTTGGAACCTTCAGTTACCGGGCTTTATCTGCGAAGAGGCCCTTCTTCACGGAGTGGAGACTAGGACCAGTTCTCCCATCCAGATTCCCCGCAATGTTAAAACTTATGAGAGCACATCATTGAAAGGTCTCTACCCTATTGGTGAAGGAGCAGGTTATGCTGGAGGGATTGTAAGTGCAGCTGTGGATGGTATGCATGCTGGTTTTGCAGTGGCAAAAAATTTTGGATTGTGTAATGATGGCATAGAGTCAATTTTGGGCAAGGCTCGGAGTGCTGGATTTTTGGAGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAD_binding_2 FAD_binding_3 Pyr_redox Pyr_redox_2

Protein Analysis

740

Amino Acids

81.08

Weight (kDa)

9.01

Isoelectric Point (pI)

38.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox PF00070 220 - 269 3.9e-06 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_3 PF01494 220 - 257 1e-05 FAD binding domain
FAD-depend_C PF21688 414 - 610 6.2e-59 FAD-dependent protein, C-terminal domain-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014340)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G30720
fragaria_vesca FvH4_1g00650 FvH4_1g00650
malus_domestica MD02G1005300.v1.1
prunus_persica Prupe.7G265700_v2.0.a1 Prupe.7G265700_v2.0.a1
pyrus_communis pycom02g00410
rosa_chinensis RchiOBHm_Chr2g0085271
rosa_laevigata RLG00000015673
rosa_multiflora Rmu_sc0008510.1_g000007
rosa_roxburghii Rroxscaffold_2G00155500
rosa_rugosa Rorug01G0458800 Rorug01G0458900
rosa_samantha Rh2AG007500 Rh2BG008100 Rh2CG008900
rosa_wichuraiana Rw2G000710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 836, 2072
Acc65I GGTACC 1 cut(s) 848
AccB1I GGYRCC 2 cut(s) 848, 1663
AccBSI CCGCTC 1 cut(s) 1634
AccI GTMKAC 2 cut(s) 246, 1119
AccII CGCG 2 cut(s) 1332, 1895
AccIII TCCGGA 1 cut(s) 587
AclWI GGATC 4 cut(s) 634, 809, 1200, 1225
AcsI RAATTY 9 cut(s) 404, 635, 716, 948, 1619, 1654, 1834, 1929, 2149
AcuI CTGAAG 1 cut(s) 1925
AcyI GRCGYC 1 cut(s) 276
AdeI CACNNNGTG 1 cut(s) 1984
AfaI GTAC 7 cut(s) 632, 850, 1154, 1341, 1468, 1886, 2219
AfiI CCNNNNNNNGG 6 cut(s) 262, 363, 494, 495, 974, 1598
AgsI TTSAA 9 cut(s) 169, 296, 333, 394, 929, 1579, 1834, 1928, 2053
AjiI CACGTC 1 cut(s) 1514
AjnI CCWGG 3 cut(s) 851, 875, 1441
AluBI AGCT 9 cut(s) 232, 288, 439, 868, 938, 1030, 1290, 1419, 2111
AluI AGCT 9 cut(s) 232, 288, 439, 868, 938, 1030, 1290, 1419, 2111
Alw21I GWGCWC 5 cut(s) 162, 315, 787, 940, 2045
Alw26I GTCTC 6 cut(s) 283, 624, 1558, 1784, 1982, 2063
AlwI GGATC 4 cut(s) 634, 809, 1200, 1225
Ama87I CYCGRG 1 cut(s) 314
Aor13HI TCCGGA 1 cut(s) 587
AoxI GGCC 2 cut(s) 348, 1968
ApeKI GCWGC 8 cut(s) 337, 698, 1015, 1419, 1535, 1751, 1798, 2108
ApoI RAATTY 9 cut(s) 404, 635, 716, 948, 1619, 1654, 1834, 1929, 2149
Asp718I GGTACC 1 cut(s) 848
AspS9I GGNCC 5 cut(s) 123, 680, 1589, 1969, 1995
AsuC2I CCSGG 2 cut(s) 258, 1950
AsuHPI GGTGA 4 cut(s) 346, 724, 883, 2084
AvaI CYCGRG 1 cut(s) 314
AvaII GGWCC 4 cut(s) 123, 680, 1589, 1995
BanI GGYRCC 2 cut(s) 848, 1663
BanII GRGCYC 2 cut(s) 489, 940
BauI CACGAG 1 cut(s) 456
Bbv12I GWGCWC 5 cut(s) 162, 315, 787, 940, 2045
BbvI GCAGC 8 cut(s) 324, 685, 1027, 1406, 1522, 1763, 1810, 2120
BccI CCATC 8 cut(s) 48, 691, 854, 1049, 1483, 2015, 2111, 2162
BceAI ACGGC 1 cut(s) 660
BciT130I CCWGG 3 cut(s) 853, 877, 1443
BcnI CCSGG 2 cut(s) 258, 1950
BcoDI GTCTC 6 cut(s) 283, 624, 1558, 1784, 1982, 2063
BfaI CTAG 6 cut(s) 75, 648, 1134, 1595, 1992, 2221
BfuAI ACCTGC 2 cut(s) 836, 2072
BglII AGATCT 1 cut(s) 105
BmcAI AGTACT 1 cut(s) 2219
Bme1390I CCNGG 5 cut(s) 258, 853, 877, 1443, 1950
Bme18I GGWCC 4 cut(s) 123, 680, 1589, 1995
BmeT110I CYCGRG 1 cut(s) 314
BmgBI CACGTC 1 cut(s) 1514
BmgT120I GGNCC 5 cut(s) 123, 680, 1589, 1969, 1995
BmiI GGNNCC 5 cut(s) 486, 850, 993, 1665, 1937
BmrFI CCNGG 5 cut(s) 258, 853, 877, 1443, 1950
BmsI GCATC 5 cut(s) 367, 580, 1027, 1147, 1276
BpmI CTGGAG 5 cut(s) 94, 552, 874, 924, 2112
BpuEI CTTGAG 6 cut(s) 86, 146, 501, 606, 1257, 1504
BpuMI CCSGG 2 cut(s) 258, 1950
Bsa29I ATCGAT 1 cut(s) 1735
BsaBI GATNNNNATC 1 cut(s) 1197
BsaHI GRCGYC 1 cut(s) 276
BsaI GGTCTC 2 cut(s) 624, 2063
BsaJI CCNNGG 5 cut(s) 256, 271, 342, 357, 1585
BsaWI WCCGGW 3 cut(s) 241, 322, 587
BsaXI ACNNNNNCTCC 6 cut(s) 228, 258, 1987, 2017, 2085, 2115
Bsc4I CCNNNNNNNGG 6 cut(s) 262, 363, 494, 495, 974, 1598
Bse1I ACTGG 2 cut(s) 1343, 1998
Bse3DI GCAATG 1 cut(s) 2029
Bse8I GATNNNNATC 1 cut(s) 1197
BseAI TCCGGA 1 cut(s) 587
BseBI CCWGG 3 cut(s) 853, 877, 1443
BseCI ATCGAT 1 cut(s) 1735
BseDI CCNNGG 5 cut(s) 256, 271, 342, 357, 1585
BseGI GGATG 5 cut(s) 82, 433, 1267, 2007, 2122
BseJI GATNNNNATC 1 cut(s) 1197
BseLI CCNNNNNNNGG 6 cut(s) 262, 363, 494, 495, 974, 1598
BseMI GCAATG 1 cut(s) 2029
BseMII CTCAG 2 cut(s) 1305, 1824
BseNI ACTGG 2 cut(s) 1343, 1998
BseRI GAGGAG 1 cut(s) 35
BseXI GCAGC 8 cut(s) 324, 685, 1027, 1406, 1522, 1763, 1810, 2120
BseYI CCCAGC 1 cut(s) 1030
BsgI GTGCAG 6 cut(s) 744, 864, 1170, 1521, 1691, 2127
Bsh1236I CGCG 2 cut(s) 1332, 1895
Bsh1285I CGRYCG 2 cut(s) 246, 250
BshFI GGCC 2 cut(s) 350, 1970
BshNI GGYRCC 2 cut(s) 848, 1663
BshVI ATCGAT 1 cut(s) 1735
BsiEI CGRYCG 2 cut(s) 246, 250
BsiHKAI GWGCWC 5 cut(s) 162, 315, 787, 940, 2045
BsiHKCI CYCGRG 1 cut(s) 314
BsiSI CCGG 6 cut(s) 126, 242, 258, 323, 588, 1949
BslFI GGGAC 2 cut(s) 479, 1066
BslI CCNNNNNNNGG 6 cut(s) 262, 363, 494, 495, 974, 1598
BsmAI GTCTC 6 cut(s) 283, 624, 1558, 1784, 1982, 2063
BsmBI CGTCTC 2 cut(s) 283, 1558
BsmFI GGGAC 2 cut(s) 479, 1066
BsnI GGCC 2 cut(s) 350, 1970
Bso31I GGTCTC 2 cut(s) 624, 2063
BsoBI CYCGRG 1 cut(s) 314
Bsp1286I GDGCHC 6 cut(s) 162, 315, 489, 787, 940, 2045
Bsp13I TCCGGA 1 cut(s) 587
Bsp143I GATC 6 cut(s) 105, 626, 801, 1066, 1192, 1230
Bsp19I CCATGG 1 cut(s) 1585
BspANI GGCC 2 cut(s) 350, 1970
BspCNI CTCAG 2 cut(s) 1306, 1823
BspDI ATCGAT 1 cut(s) 1735
BspEI TCCGGA 1 cut(s) 587
BspFNI CGCG 2 cut(s) 1332, 1895
BspLI GGNNCC 5 cut(s) 486, 850, 993, 1665, 1937
BspMI ACCTGC 2 cut(s) 836, 2072
BspPI GGATC 4 cut(s) 634, 809, 1200, 1225
BspT107I GGYRCC 2 cut(s) 848, 1663
BspTNI GGTCTC 2 cut(s) 624, 2063
BsrBI CCGCTC 1 cut(s) 1634
BsrDI GCAATG 1 cut(s) 2029
BsrI ACTGG 2 cut(s) 1343, 1998
BssECI CCNNGG 5 cut(s) 256, 271, 342, 357, 1585
BssMI GATC 6 cut(s) 105, 626, 801, 1066, 1192, 1230
BssNI GRCGYC 1 cut(s) 276
BssSI CACGAG 1 cut(s) 456
BssT1I CCWWGG 1 cut(s) 1585
Bst2BI CACGAG 1 cut(s) 456
Bst2UI CCWGG 3 cut(s) 853, 877, 1443
Bst6I CTCTTC 2 cut(s) 380, 1959
BstACI GRCGYC 1 cut(s) 276
BstAPI GCANNNNNTGC 3 cut(s) 825, 1535, 2087
BstC8I GCNNGC 5 cut(s) 131, 290, 1256, 1404, 2127
BstDEI CTNAG 2 cut(s) 1314, 1810
BstDSI CCRYGG 2 cut(s) 357, 1585
BstEII GGTNACC 1 cut(s) 871
BstENI CCTNNNNNAGG 1 cut(s) 1596
BstF5I GGATG 5 cut(s) 82, 433, 1267, 2007, 2122
BstFNI CGCG 2 cut(s) 1332, 1895
BstKTI GATC 6 cut(s) 108, 629, 804, 1069, 1195, 1233
BstMAI GTCTC 6 cut(s) 283, 624, 1558, 1784, 1982, 2063
BstMBI GATC 6 cut(s) 105, 626, 801, 1066, 1192, 1230
BstMCI CGRYCG 2 cut(s) 246, 250
BstMWI GCNNNNNNNGC 9 cut(s) 229, 825, 1264, 1329, 1535, 1959, 2087, 2135, 2201
BstNI CCWGG 3 cut(s) 853, 877, 1443
BstNSI RCATGY 4 cut(s) 514, 1406, 1501, 2129
BstPI GGTNACC 1 cut(s) 871
BstSCI CCNGG 5 cut(s) 256, 851, 875, 1441, 1948
BstUI CGCG 2 cut(s) 1332, 1895
BstV1I GCAGC 8 cut(s) 324, 685, 1027, 1406, 1522, 1763, 1810, 2120
BstX2I RGATCY 3 cut(s) 105, 801, 1192
BstYI RGATCY 3 cut(s) 105, 801, 1192
Bsu15I ATCGAT 1 cut(s) 1735
BsuRI GGCC 2 cut(s) 350, 1970
BsuTUI ATCGAT 1 cut(s) 1735
BtgI CCRYGG 2 cut(s) 357, 1585
BtrI CACGTC 1 cut(s) 1514
BtsCI GGATG 5 cut(s) 82, 433, 1267, 2007, 2122
BtsI GCAGTG 2 cut(s) 682, 2145
BtsIMutI CAGTG 5 cut(s) 682, 898, 1350, 1863, 2145
BveI ACCTGC 2 cut(s) 836, 2072
Cac8I GCNNGC 5 cut(s) 131, 290, 1256, 1404, 2127
Cfr13I GGNCC 5 cut(s) 123, 680, 1589, 1969, 1995
ClaI ATCGAT 1 cut(s) 1735
CseI GACGC 2 cut(s) 265, 1338
Csp6I GTAC 7 cut(s) 631, 849, 1153, 1340, 1467, 1885, 2218
CviAII CATG 5 cut(s) 511, 1403, 1498, 1586, 2126
CviQI GTAC 7 cut(s) 631, 849, 1153, 1340, 1467, 1885, 2218
DdeI CTNAG 2 cut(s) 1314, 1810
DpnI GATC 6 cut(s) 107, 628, 803, 1068, 1194, 1232
DpnII GATC 6 cut(s) 105, 626, 801, 1066, 1192, 1230
DraIII CACNNNGTG 1 cut(s) 1984
Eam1104I CTCTTC 2 cut(s) 380, 1959
EarI CTCTTC 2 cut(s) 380, 1959
EciI GGCGGA 1 cut(s) 38
Ecl136II GAGCTC 1 cut(s) 938
Eco130I CCWWGG 1 cut(s) 1585
Eco147I AGGCCT 1 cut(s) 350
Eco24I GRGCYC 2 cut(s) 489, 940
Eco31I GGTCTC 2 cut(s) 624, 2063
Eco32I GATATC 2 cut(s) 181, 528
Eco47I GGWCC 4 cut(s) 123, 680, 1589, 1995
Eco53kI GAGCTC 1 cut(s) 938
Eco57I CTGAAG 1 cut(s) 1925
Eco88I CYCGRG 1 cut(s) 314
Eco91I GGTNACC 1 cut(s) 871
EcoICRI GAGCTC 1 cut(s) 938
EcoNI CCTNNNNNAGG 1 cut(s) 1596
EcoO109I RGGNCCY 1 cut(s) 1969
EcoO65I GGTNACC 1 cut(s) 871
EcoRI GAATTC 1 cut(s) 1834
EcoRII CCWGG 3 cut(s) 851, 875, 1441
EcoRV GATATC 2 cut(s) 181, 528
EcoT14I CCWWGG 1 cut(s) 1585
EcoT22I ATGCAT 1 cut(s) 2127
EcoT38I GRGCYC 2 cut(s) 489, 940
ErhI CCWWGG 1 cut(s) 1585
Esp3I CGTCTC 2 cut(s) 283, 1558
FaeI CATG 5 cut(s) 514, 1406, 1501, 1589, 2129
FalI AAGNNNNNCTT 2 cut(s) 1956, 1988
FaqI GGGAC 2 cut(s) 479, 1066
FatI CATG 5 cut(s) 510, 1402, 1497, 1585, 2125
FauI CCCGC 1 cut(s) 2027
FblI GTMKAC 2 cut(s) 246, 1119
FokI GGATG 5 cut(s) 69, 440, 1254, 1994, 2129
FriOI GRGCYC 2 cut(s) 489, 940
FspBI CTAG 6 cut(s) 75, 648, 1134, 1595, 1992, 2221
GsaI CCCAGC 1 cut(s) 1034
GsuI CTGGAG 5 cut(s) 94, 552, 874, 924, 2112
HaeIII GGCC 2 cut(s) 350, 1970
HapII CCGG 6 cut(s) 126, 242, 258, 323, 588, 1949
HgaI GACGC 2 cut(s) 265, 1338
Hin1I GRCGYC 1 cut(s) 276
Hin1II CATG 5 cut(s) 514, 1406, 1501, 1589, 2129
HincII GTYRAC 3 cut(s) 247, 958, 1120
HindII GTYRAC 3 cut(s) 247, 958, 1120
HinfI GANTC 5 cut(s) 1112, 1517, 1579, 2014, 2177
HpaI GTTAAC 1 cut(s) 958
HpaII CCGG 6 cut(s) 126, 242, 258, 323, 588, 1949
HphI GGTGA 4 cut(s) 346, 724, 883, 2084
Hpy166II GTNNAC 6 cut(s) 247, 412, 680, 958, 1120, 1285
Hpy8I GTNNAC 6 cut(s) 247, 412, 680, 958, 1120, 1285
Hpy99I CGWCG 4 cut(s) 148, 188, 801, 1515
HpyAV CCTTC 9 cut(s) 20, 148, 361, 938, 1438, 1741, 1949, 1982, 2069
HpyCH4IV ACGT 2 cut(s) 192, 1513
HpyF10VI GCNNNNNNNGC 9 cut(s) 229, 825, 1264, 1329, 1535, 1959, 2087, 2135, 2201
HpyF3I CTNAG 2 cut(s) 1314, 1810
HpySE526I ACGT 2 cut(s) 192, 1513
Hsp92I GRCGYC 1 cut(s) 276
Hsp92II CATG 5 cut(s) 514, 1406, 1501, 1589, 2129
Kpn2I TCCGGA 1 cut(s) 587
KpnI GGTACC 1 cut(s) 852
KspAI GTTAAC 1 cut(s) 958
Kzo9I GATC 6 cut(s) 105, 626, 801, 1066, 1192, 1230
LmnI GCTCC 4 cut(s) 484, 935, 943, 2078
Lsp1109I GCAGC 8 cut(s) 324, 685, 1027, 1406, 1522, 1763, 1810, 2120
LweI GCATC 5 cut(s) 367, 580, 1027, 1147, 1276
MaeI CTAG 6 cut(s) 75, 648, 1134, 1595, 1992, 2221
MaeII ACGT 2 cut(s) 192, 1513
MalI GATC 6 cut(s) 107, 628, 803, 1068, 1194, 1232
MbiI CCGCTC 1 cut(s) 1634
MboI GATC 6 cut(s) 105, 626, 801, 1066, 1192, 1230
MboII GAAGA 6 cut(s) 308, 397, 897, 1751, 1967, 1976
MflI RGATCY 3 cut(s) 105, 801, 1192
MhlI GDGCHC 6 cut(s) 162, 315, 489, 787, 940, 2045
MlyI GAGTC 2 cut(s) 1511, 2186
MmeI TCCRAC 5 cut(s) 126, 462, 665, 779, 1156
Mph1103I ATGCAT 1 cut(s) 2127
MroI TCCGGA 1 cut(s) 587
MseI TTAA 3 cut(s) 560, 957, 2028
MspA1I CMGCKG 2 cut(s) 114, 2111
MspI CCGG 6 cut(s) 126, 242, 258, 323, 588, 1949
MspR9I CCNGG 5 cut(s) 258, 853, 877, 1443, 1950
MvaI CCWGG 3 cut(s) 853, 877, 1443
MvnI CGCG 2 cut(s) 1332, 1895
MwoI GCNNNNNNNGC 9 cut(s) 229, 825, 1264, 1329, 1535, 1959, 2087, 2135, 2201
NciI CCSGG 2 cut(s) 258, 1950
NcoI CCATGG 1 cut(s) 1585
NdeII GATC 6 cut(s) 105, 626, 801, 1066, 1192, 1230
NlaIII CATG 5 cut(s) 514, 1406, 1501, 1589, 2129
NlaIV GGNNCC 5 cut(s) 486, 850, 993, 1665, 1937
NmeAIII GCCGAG 1 cut(s) 252
NmuCI GTSAC 7 cut(s) 251, 730, 773, 871, 1036, 1514, 1546
NsiI ATGCAT 1 cut(s) 2127
NspI RCATGY 4 cut(s) 514, 1406, 1501, 2129
PaeI GCATGC 2 cut(s) 1406, 2129
PaeR7I CTCGAG 1 cut(s) 314
PceI AGGCCT 1 cut(s) 350
PcsI WCGNNNNNNNCGW 2 cut(s) 189, 1548
PfeI GAWTC 3 cut(s) 1112, 1579, 2014
PleI GAGTC 2 cut(s) 1511, 2185
PpsI GAGTC 2 cut(s) 1511, 2185
Psp124BI GAGCTC 1 cut(s) 940
Psp6I CCWGG 3 cut(s) 851, 875, 1441
PspEI GGTNACC 1 cut(s) 871
PspFI CCCAGC 1 cut(s) 1030
PspGI CCWGG 3 cut(s) 851, 875, 1441
PspN4I GGNNCC 5 cut(s) 486, 850, 993, 1665, 1937
PspPI GGNCC 5 cut(s) 123, 680, 1589, 1969, 1995
PspXI VCTCGAGB 1 cut(s) 314
PsuI RGATCY 3 cut(s) 105, 801, 1192
PvuII CAGCTG 1 cut(s) 2111
RsaI GTAC 7 cut(s) 632, 850, 1154, 1341, 1468, 1886, 2219
RsaNI GTAC 7 cut(s) 631, 849, 1153, 1340, 1467, 1885, 2218
SacI GAGCTC 1 cut(s) 940
SalI GTCGAC 2 cut(s) 245, 1118
SaqAI TTAA 3 cut(s) 560, 957, 2028
Sau3AI GATC 6 cut(s) 105, 626, 801, 1066, 1192, 1230
Sau96I GGNCC 5 cut(s) 123, 680, 1589, 1969, 1995
ScaI AGTACT 1 cut(s) 2219
SchI GAGTC 2 cut(s) 1511, 2186
ScrFI CCNGG 5 cut(s) 258, 853, 877, 1443, 1950
SduI GDGCHC 6 cut(s) 162, 315, 489, 787, 940, 2045
SfaNI GCATC 5 cut(s) 367, 580, 1027, 1147, 1276
Sfr274I CTCGAG 1 cut(s) 314
SinI GGWCC 4 cut(s) 123, 680, 1589, 1995
SlaI CTCGAG 1 cut(s) 314
SmlI CTYRAG 7 cut(s) 101, 161, 314, 516, 621, 1272, 1519
SmoI CTYRAG 7 cut(s) 101, 161, 314, 516, 621, 1272, 1519
SphI GCATGC 2 cut(s) 1406, 2129
SseBI AGGCCT 1 cut(s) 350
SspMI CTAG 6 cut(s) 75, 648, 1134, 1595, 1992, 2221
SstI GAGCTC 1 cut(s) 940
StuI AGGCCT 1 cut(s) 350
StyD4I CCNGG 5 cut(s) 256, 851, 875, 1441, 1948
StyI CCWWGG 1 cut(s) 1585
TaiI ACGT 2 cut(s) 195, 1516
TaqI TCGA 6 cut(s) 246, 315, 1119, 1414, 1510, 1735
TatI WGTACW 3 cut(s) 1466, 1884, 2217
TauI GCSGC 3 cut(s) 93, 117, 1637
TfiI GAWTC 3 cut(s) 1112, 1579, 2014
Tru1I TTAA 3 cut(s) 560, 957, 2028
Tru9I TTAA 3 cut(s) 560, 957, 2028
TscAI CASTG 5 cut(s) 682, 898, 1350, 1870, 2145
TseFI GTSAC 7 cut(s) 251, 730, 773, 871, 1036, 1514, 1546
TseI GCWGC 8 cut(s) 337, 698, 1015, 1419, 1535, 1751, 1798, 2108
Tsp45I GTSAC 7 cut(s) 251, 730, 773, 871, 1036, 1514, 1546
TspDTI ATGAA 2 cut(s) 460, 1098
TspGWI ACGGA 4 cut(s) 785, 975, 1859, 1995
TspRI CASTG 5 cut(s) 682, 898, 1350, 1870, 2145
VpaK11BI GGWCC 4 cut(s) 123, 680, 1589, 1995
XagI CCTNNNNNAGG 1 cut(s) 1596
XapI RAATTY 9 cut(s) 404, 635, 716, 948, 1619, 1654, 1834, 1929, 2149
XceI RCATGY 4 cut(s) 514, 1406, 1501, 2129
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XhoI CTCGAG 1 cut(s) 314
XmiI GTMKAC 2 cut(s) 246, 1119
XspI CTAG 6 cut(s) 75, 648, 1134, 1595, 1992, 2221
ZrmI AGTACT 1 cut(s) 2219
Zsp2I ATGCAT 1 cut(s) 2127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.