Rh2CG247100
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
25891415 .. 25891699
285 bp
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UTR
Exon/CDS
Intron
Rh2CG247100.1

Sequence Viewer

Length: 285 bp
ATGGTTCATAATCGGTGTCTCCACATCTCAGAGTCAAGGAGTGCTTCTTCTTGCTATCTGGGCGCTTTCAAACTCAACCATCCCGAGGCATTGGTGTTTATCAACAACTGCAATGTAATCTCAAGGGCTGTGATGAAGAAATGTGGAGATGCCGATGATTCCATCTCAACTACAGATGCTGCTGAATTAGCCGCATCACTTGATGAGAAGGTGAAGAATGATTTGCCACTGCCAGGGCAAGTAGATTTCATTAATGGAGGGCCTTCCCAACATGTTTGTTTCTGA

Protein Analysis

94

Amino Acids

10.13

Weight (kDa)

5.68

Isoelectric Point (pI)

40.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018782)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 192
AfiI CCNNNNNNNGG 2 cut(s) 85, 233
AflIII ACRYGT 1 cut(s) 271
AgsI TTSAA 1 cut(s) 70
AjnI CCWGG 1 cut(s) 232
Alw26I GTCTC 1 cut(s) 23
AlwNI CAGNNNCTG 1 cut(s) 179
Ama87I CYCGRG 1 cut(s) 83
AoxI GGCC 1 cut(s) 260
ApeKI GCWGC 1 cut(s) 179
AseI ATTAAT 1 cut(s) 252
AspLEI GCGC 1 cut(s) 65
AspS9I GGNCC 1 cut(s) 260
AsuHPI GGTGA 1 cut(s) 223
AvaI CYCGRG 1 cut(s) 83
BbvI GCAGC 1 cut(s) 166
BccI CCATC 2 cut(s) 87, 170
BciT130I CCWGG 1 cut(s) 234
BcoDI GTCTC 1 cut(s) 23
BfmI CTRYAG 1 cut(s) 171
BfoI RGCGCY 1 cut(s) 66
BisI GCNGC 2 cut(s) 180, 192
BlsI GCNGC 2 cut(s) 181, 193
Bme1390I CCNGG 1 cut(s) 234
BmeT110I CYCGRG 1 cut(s) 83
BmgT120I GGNCC 1 cut(s) 260
BmrFI CCNGG 1 cut(s) 234
BmsI GCATC 3 cut(s) 139, 166, 203
BpuEI CTTGAG 1 cut(s) 106
BsaJI CCNNGG 2 cut(s) 84, 233
Bsc4I CCNNNNNNNGG 2 cut(s) 85, 233
Bse3DI GCAATG 1 cut(s) 118
BseBI CCWGG 1 cut(s) 234
BseDI CCNNGG 2 cut(s) 84, 233
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 2 cut(s) 85, 233
BseMI GCAATG 1 cut(s) 118
BseMII CTCAG 1 cut(s) 42
BseXI GCAGC 1 cut(s) 166
BshFI GGCC 1 cut(s) 262
BsiHKCI CYCGRG 1 cut(s) 83
BslI CCNNNNNNNGG 2 cut(s) 85, 233
BsmAI GTCTC 1 cut(s) 23
BsnI GGCC 1 cut(s) 262
BsoBI CYCGRG 1 cut(s) 83
BspACI CCGC 1 cut(s) 192
BspANI GGCC 1 cut(s) 262
BspCNI CTCAG 1 cut(s) 41
BsrDI GCAATG 1 cut(s) 118
BssECI CCNNGG 2 cut(s) 84, 233
Bst2UI CCWGG 1 cut(s) 234
BstDEI CTNAG 1 cut(s) 28
BstF5I GGATG 1 cut(s) 79
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 1 cut(s) 65
BstMAI GTCTC 1 cut(s) 23
BstMWI GCNNNNNNNGC 2 cut(s) 60, 188
BstNI CCWGG 1 cut(s) 234
BstNSI RCATGY 1 cut(s) 275
BstSCI CCNGG 1 cut(s) 232
BstSFI CTRYAG 1 cut(s) 171
BstV1I GCAGC 1 cut(s) 166
BsuRI GGCC 1 cut(s) 262
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 1 cut(s) 227
BtsIMutI CAGTG 1 cut(s) 227
CaiI CAGNNNCTG 1 cut(s) 179
CfoI GCGC 1 cut(s) 65
Cfr13I GGNCC 1 cut(s) 260
CviAII CATG 1 cut(s) 272
CviJI RGCY 3 cut(s) 128, 191, 262
CviKI_1 RGCY 3 cut(s) 128, 191, 262
DdeI CTNAG 1 cut(s) 28
Eco88I CYCGRG 1 cut(s) 83
EcoO109I RGGNCCY 1 cut(s) 260
EcoRII CCWGG 1 cut(s) 232
FaeI CATG 1 cut(s) 275
FaiI YATR 2 cut(s) 9, 273
FalI AAGNNNNNCTT 2 cut(s) 28, 60
FatI CATG 1 cut(s) 271
Fnu4HI GCNGC 2 cut(s) 180, 192
FokI GGATG 1 cut(s) 66
Fsp4HI GCNGC 2 cut(s) 180, 192
GlaI GCGC 1 cut(s) 64
GluI GCNGC 2 cut(s) 180, 192
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 1 cut(s) 262
HhaI GCGC 1 cut(s) 65
Hin1II CATG 1 cut(s) 275
Hin6I GCGC 1 cut(s) 63
HinP1I GCGC 1 cut(s) 63
HinfI GANTC 2 cut(s) 32, 158
HphI GGTGA 1 cut(s) 223
Hpy188I TCNGA 2 cut(s) 31, 284
Hpy188III TCNNGA 1 cut(s) 83
HpyAV CCTTC 2 cut(s) 202, 273
HpyCH4V TGCA 1 cut(s) 111
HpyF10VI GCNNNNNNNGC 2 cut(s) 60, 188
HpyF3I CTNAG 1 cut(s) 28
Hsp92II CATG 1 cut(s) 275
HspAI GCGC 1 cut(s) 63
LpnPI CCDG 3 cut(s) 44, 219, 246
Lsp1109I GCAGC 1 cut(s) 166
LweI GCATC 3 cut(s) 139, 166, 203
MboII GAAGA 3 cut(s) 39, 148, 226
MluCI AATT 1 cut(s) 185
MlyI GAGTC 1 cut(s) 41
MnlI CCTC 2 cut(s) 79, 251
MseI TTAA 1 cut(s) 252
MspR9I CCNGG 1 cut(s) 234
MvaI CCWGG 1 cut(s) 234
MwoI GCNNNNNNNGC 2 cut(s) 60, 188
NlaIII CATG 1 cut(s) 275
NspI RCATGY 1 cut(s) 275
PciI ACATGT 1 cut(s) 271
PfeI GAWTC 1 cut(s) 158
PkrI GCNGC 2 cut(s) 181, 193
PleI GAGTC 1 cut(s) 40
PpsI GAGTC 1 cut(s) 40
PscI ACATGT 1 cut(s) 271
PshBI ATTAAT 1 cut(s) 252
Psp6I CCWGG 1 cut(s) 232
PspGI CCWGG 1 cut(s) 232
PspPI GGNCC 1 cut(s) 260
PstNI CAGNNNCTG 1 cut(s) 179
SaqAI TTAA 1 cut(s) 252
SatI GCNGC 2 cut(s) 180, 192
Sau96I GGNCC 1 cut(s) 260
SchI GAGTC 1 cut(s) 41
ScrFI CCNGG 1 cut(s) 234
SetI ASST 1 cut(s) 213
SfaNI GCATC 3 cut(s) 139, 166, 203
SfcI CTRYAG 1 cut(s) 171
SmlI CTYRAG 1 cut(s) 121
SmoI CTYRAG 1 cut(s) 121
Sse9I AATT 1 cut(s) 185
SsiI CCGC 1 cut(s) 192
StyD4I CCNGG 1 cut(s) 232
TasI AATT 1 cut(s) 185
TauI GCSGC 1 cut(s) 194
TfiI GAWTC 1 cut(s) 158
Tru1I TTAA 1 cut(s) 252
Tru9I TTAA 1 cut(s) 252
TscAI CASTG 1 cut(s) 234
TseI GCWGC 1 cut(s) 179
TspDTI ATGAA 2 cut(s) 149, 238
TspRI CASTG 1 cut(s) 234
VspI ATTAAT 1 cut(s) 252
XceI RCATGY 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.