Rh2CG553100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
73229881 .. 73230909
1029 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG553100.1

Sequence Viewer

Length: 315 bp
ATGGAAGTAGTGGTTCAAGATTTAGCGAAAAAATGGGGAGAAATTCAAGATAATGCACTGAGCCAGCCTTTTCCAGCTCAAAGAGAGAAGATTCTGGATAAACAGTATCACAGCCTCATTGAGCAACTAGAAGCAAAACAGGCACAAGCAGAAGTCCTAGATGGTGAAATTCATTTGAAAGAGATGCAGCTGGAAAGATTAAATGGATTGTGGAGGAAGCTCGAAAGCAGCAACAATGAGATCAGTGCTGCTAGAAATCGGTTTGGACAAAGTACATCTGAAAGAGACAATATCCTTGAAGCTCGTCACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

104

Amino Acids

12.07

Weight (kDa)

5.62

Isoelectric Point (pI)

58.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019365)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 42, 168
AfaI GTAC 1 cut(s) 274
AgsI TTSAA 4 cut(s) 17, 47, 178, 299
AluBI AGCT 4 cut(s) 77, 190, 220, 302
AluI AGCT 4 cut(s) 77, 190, 220, 302
Alw26I GTCTC 1 cut(s) 279
ApeKI GCWGC 3 cut(s) 187, 228, 248
ApoI RAATTY 2 cut(s) 42, 168
AsuHPI GGTGA 1 cut(s) 176
BbvI GCAGC 3 cut(s) 199, 235, 240
BccI CCATC 1 cut(s) 155
BcoDI GTCTC 1 cut(s) 279
BfaI CTAG 3 cut(s) 128, 158, 252
BisI GCNGC 3 cut(s) 188, 229, 249
BlsI GCNGC 3 cut(s) 189, 230, 250
BmsI GCATC 1 cut(s) 174
BseMII CTCAG 1 cut(s) 50
BseXI GCAGC 3 cut(s) 199, 235, 240
BsmAI GTCTC 1 cut(s) 279
Bsp143I GATC 1 cut(s) 240
BspCNI CTCAG 1 cut(s) 51
BssMI GATC 1 cut(s) 240
Bst4CI ACNGT 1 cut(s) 105
BstC8I GCNNGC 1 cut(s) 65
BstDEI CTNAG 1 cut(s) 59
BstKTI GATC 1 cut(s) 243
BstMAI GTCTC 1 cut(s) 279
BstMBI GATC 1 cut(s) 240
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstV1I GCAGC 3 cut(s) 199, 235, 240
BtsIMutI CAGTG 2 cut(s) 56, 250
Cac8I GCNNGC 1 cut(s) 65
Csp6I GTAC 1 cut(s) 273
CviJI RGCY 7 cut(s) 63, 67, 77, 114, 190, 220, 302
CviKI_1 RGCY 7 cut(s) 63, 67, 77, 114, 190, 220, 302
CviQI GTAC 1 cut(s) 273
DdeI CTNAG 1 cut(s) 59
DpnI GATC 1 cut(s) 242
DpnII GATC 1 cut(s) 240
Fnu4HI GCNGC 3 cut(s) 188, 229, 249
Fsp4HI GCNGC 3 cut(s) 188, 229, 249
FspBI CTAG 3 cut(s) 128, 158, 252
GluI GCNGC 3 cut(s) 188, 229, 249
HinfI GANTC 1 cut(s) 91
HphI GGTGA 1 cut(s) 176
Hpy188I TCNGA 1 cut(s) 280
Hpy188III TCNNGA 3 cut(s) 17, 47, 95
HpyCH4III ACNGT 1 cut(s) 105
HpyCH4V TGCA 2 cut(s) 56, 187
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
HpyF3I CTNAG 1 cut(s) 59
Kzo9I GATC 1 cut(s) 240
LpnPI CCDG 5 cut(s) 77, 80, 87, 125, 176
Lsp1109I GCAGC 3 cut(s) 199, 235, 240
LweI GCATC 1 cut(s) 174
MaeI CTAG 3 cut(s) 128, 158, 252
MaeIII GTNAC 1 cut(s) 305
MalI GATC 1 cut(s) 242
MboI GATC 1 cut(s) 240
MboII GAAGA 1 cut(s) 100
MluCI AATT 2 cut(s) 42, 168
MnlI CCTC 2 cut(s) 125, 207
MseI TTAA 1 cut(s) 200
MspA1I CMGCKG 1 cut(s) 190
MwoI GCNNNNNNNGC 1 cut(s) 140
NdeII GATC 1 cut(s) 240
NmuCI GTSAC 1 cut(s) 305
PfeI GAWTC 1 cut(s) 91
PkrI GCNGC 3 cut(s) 189, 230, 250
PvuII CAGCTG 1 cut(s) 190
RsaI GTAC 1 cut(s) 274
RsaNI GTAC 1 cut(s) 273
SaqAI TTAA 1 cut(s) 200
SatI GCNGC 3 cut(s) 188, 229, 249
Sau3AI GATC 1 cut(s) 240
SetI ASST 4 cut(s) 79, 192, 222, 304
SfaNI GCATC 1 cut(s) 174
Sse9I AATT 2 cut(s) 42, 168
SspMI CTAG 3 cut(s) 128, 158, 252
TaaI ACNGT 1 cut(s) 105
TaqI TCGA 1 cut(s) 222
TasI AATT 2 cut(s) 42, 168
TatI WGTACW 1 cut(s) 272
TfiI GAWTC 1 cut(s) 91
Tru1I TTAA 1 cut(s) 200
Tru9I TTAA 1 cut(s) 200
TscAI CASTG 2 cut(s) 63, 250
TseFI GTSAC 1 cut(s) 305
TseI GCWGC 3 cut(s) 187, 228, 248
Tsp45I GTSAC 1 cut(s) 305
TspDTI ATGAA 1 cut(s) 161
TspRI CASTG 2 cut(s) 63, 250
XapI RAATTY 2 cut(s) 42, 168
XspI CTAG 3 cut(s) 128, 158, 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.