Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0011805

Physical Location & Seq

Genomic Coordinates Forward (+)

1780792 .. 1787228

Gene Structure 6437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG029400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

ATGCCGGAGGGTACCAGAATGGCCGGGAACGACTGGATAAATAGTTACCTGGAGGCGATTCTCGACGTCGGTCCCGGCCTGGTCGACGATGCTAAGTCGTCGTTGCTGCTTCGGGAGAGAGGTCACTTCAGTCCGACGAGGTACTTCGTGGAGGAGGTCATCACCGGCTTCGATGAGACCGATCTCCACCGCTCTTGGGTTCGCGCCGCGGCGACGAGGAGTCCGCAGGAGAGGAACACCAGGTTGGAGAATCTGTGCTGGCGGATTTGGAACTTGGCTCGCCAGAAGAAGCAGCTTGAGGAAAAGGAAGCTCAGAGGATGACTAAGCGTCGTCTTGAAAGAGAAAGGGGCCGCAGAGAAGCTACTGCTGATATGTCGGAGGACTTATCTGAGGGAGAGAAGGGAGATGTAGTGGCGTCTGATGTATCGGCTCATGGTGATAGTGTCAGAGGCAGACTGCCGAGGATTAACTCCGTTGACGCAATGGAGACTTTTATAAGTCAGCAGAAGGGGAAGAAGCTATATATTGTCTTAATAAGTCTTCATGGTCTTATCCGGGGTGAAAATATGGAGCTCGGTCGCGACTCTGATACTGGTGGTCAGGTTAAATATGTAGTGGAACTTGCAAGGGCTTTGGGTAGCATGCCAGGAGTGTATCGAGTTGATCTGCTAACTAGACAAGTGTCATCACCTGACGTAGATTGGAGTTATGGTGAGCCCACAGAGATGCTAACTCCACTAAGTGCAGAAGGTTTCGAGGAAGAGACAGGAGAGAGCAGTGGTTCTTACATCATTCGTATACCATTTGGTCCCAGAGATAAATACATCCCCAAAGAAAACCTCTGGCCACACATCCCCGAATTTGTTGATGGTGCGTTGAACCACGTAATACAAATGTCCAAAGTTTTAGGTGAACAAGTCGGTGGTGGGAAGCCAGTTTGGCCAGTTGCCATCCATGGGCATTATGCAGATGCAGGTGACTCTGCTGCCCTCCTATCTGGTGCTTTAAATGTACCAATGCTTTTCACTGGCCACTCACTTGGCAGAGATAAGTTGGAGCAACTTTTAAAACAAGGCCGTCTATCAAGGGATGAAATAAACGCCACATACAAAATAATGCGTCGGATAGAAGCTGAGGAGTTATCCCTTGATGCCTCTGAAATAGTTATTACCAGCACTAGACAGGAGATTGACGAGCAATGGCGCTTGTATGATGGATTCGATCCCATACTGGAGCGAAAAATACGAGCCAGGATCAGGCGTAATGTGAGCTGTTATGGCAGGTTCATGCCCCGCATGGTGGTAATTCCTCCTGGAATGGAGTTCCATCATATTGTTCCACAGGATGGTGATATGGATGGTGAAACAGAGGCAAACGAAGACCATCATCCTACTCCTGCAGACCCACCTATTTGGACTGAGATAATGCGCTTCTTTACCAATCCTCGAAAGCCTATGATTCTTGCCCTTGCTAGACCAGATCCAAAAAAGAACATCACAACTTTGGTCAAAGCATTTGGAGAATGTCGTCCATTAAGAGAGCTCGCTAATCTTACATTAATTATGGGTAATCGAGATGGAATTGATGACATGTCAAGCACAAGTGCTTCTGTTCTTCTTTCAGTTCTCAAGCTCATTGACAAACATGATTTGTATGGGCAAGTTGCATACCCCAAACACCACAAGCAGTCTGATGTTCCTGAGATATATCGTCTTGCAGCAAAGACAAAGGGTGTTTTCATCAATCCAGCTTTCATCGAGCCATTCGGACTAACATTGATTGAGGCAGCTGCTTATGGTTTACCTATCGTTGCCACAAAAAATGGCGGTCCTGTTGATATTATACAGGTCCTTGACAATGGTCTTCTTATTGATCCCCATGATCAGCAGTCTATCGCCGATGCTCTTCTGAAGCTTGTTGCAGATAAGCAGCTCTGGGCAAGATGTCGTCAGAATGGATTGAAGAACATTCACCTATACTCATGGCCTGAGCACTGCAAGACTTACCTATCTCGAATAGCCAGCTGCAAAACAAGGCATCCACAGTGGCAAAGAAGTGATGATGGAGCAGAATCTTCAGAATCGGATTCCCCAAGTGATTCCTTGAGAGATATACAGGATTTGTCTTTGAACTTGAAGTTCTCAATGGATGGAGAAAGGAGTGGAATTAGTGTGAATGAGAACTCTTTAGAATCTGAAGGAAGTATTGATAGAAAGAGTAAAATAGAGAATGCTGTTTTGGCATGGTCAAAGGGTATTTCAAGGGACACGCGGAAAGCTGGTTTCTCAGAGAAAGCAGACCATAACAGTAGTGGTAAGTTCCCAGTGTTGAGGAGGAGGAAACATATTATTGTCATTGCTGTGGATTGTGATACCATTACAGATCTGATCGAAACCACTAAAAAGATTTTTGAGGCTACAGAAAAGGAAAGGACAGAAGGATCAATAGGGTACATATTGTCAACATCCTTGACCATAATCGAGATACGCTCGTTTCTGGTCTCTGGGGGCTTGGGCCCTAATGATTTTGATGCGTTTATTTGCAACAGTGGCAGTGATCTCTACTATCCATCTATTAATTCAGATGATCGTCCATTTGTGGTTGACTTTTATTACCACTCGCACATTGAATATCGCTGGGGTGGAGAAGGGTTGAGGAAGACGTTGGTACGCTGGGCAACTTCAACCAATGATAAGAAGAGTGGGAGTGAGGAACAGATTGTTACTGCATCTGAACAACTTTCAACCGACTATTGTTATGCTTTTAAAGTGCAAAAGCCAGCATTGGTAAACATTCCTCACCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0016020 GO:0030054 GO:0044424 GO:0044444 GO:0044464 GO:0046903 GO:0051179 GO:0051234 GO:0055044 GO:0071836 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 S6PP Sucrose_synth

Protein Analysis

935

Amino Acids

105.04

Weight (kDa)

5.85

Isoelectric Point (pI)

46.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GT-B_Sucrose_synth	PF00862	162 - 441	1.5e-10	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	480 - 654	1.1e-24	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	485 - 642	9.8e-16	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011805)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20280
fragaria_vesca	FvH4_1g02490 FvH4_1g02490 FvH4_1g02490
malus_domestica	MD02G1022300.v1.1 MD15G1164900.v1.1
prunus_persica	Prupe.7G249900_v2.0.a1
pyrus_communis	pycom02g01920 pycom15g14780
rosa_chinensis	RchiOBHm_Chr2g0087491
rosa_laevigata	RLG00000015873
rosa_multiflora	Rmu_sc0002299.1_g000009
rosa_roxburghii	Rroxscaffold_2G00153510
rosa_rugosa	Rorug01G0475900.1 Rorug01G0476000
rosa_samantha	Rh2AG029400 Rh2BG029500 Rh2DG029400
rosa_wichuraiana	Rw2G002330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	497
AarI	CACCTGC	1 cut(s)	965
AatII	GACGTC	1 cut(s)	69
Acc36I	ACCTGC	2 cut(s)	965, 1272
Acc65I	GGTACC	1 cut(s)	11
AccB1I	GGYRCC	1 cut(s)	11
AccB7I	CCANNNNNTGG	1 cut(s)	1346
AccBSI	CCGCTC	1 cut(s)	192
AccI	GTMKAC	2 cut(s)	84, 799
AccII	CGCG	4 cut(s)	204, 209, 582, 2272
AciI	CCGC	9 cut(s)	190, 207, 209, 224, 262, 352, 1294, 1827, 2272
AclWI	GGATC	5 cut(s)	1217, 1262, 1475, 1868, 2449
AcoI	YGGCCR	4 cut(s)	21, 845, 941, 1030
AcsI	RAATTY	1 cut(s)	860
AcuI	CTGAAG	4 cut(s)	112, 1931, 2061, 2217
AcyI	GRCGYC	2 cut(s)	66, 416
AdeI	CACNNNGTG	1 cut(s)	743
AfaI	GTAC	5 cut(s)	13, 143, 1014, 2453, 2670
AfiI	CCNNNNNNNGG	5 cut(s)	196, 957, 1257, 1300, 1346
AflIII	ACRYGT	1 cut(s)	1590
AgsI	TTSAA	9 cut(s)	338, 880, 1963, 2131, 2137, 2262, 2630, 2685, 2745
AhdI	GACNNNNNGTC	2 cut(s)	219, 327
AjnI	CCWGG	6 cut(s)	48, 78, 239, 646, 1250, 1312
AjuI	GAANNNNNNNTTGG	4 cut(s)	227, 259, 2222, 2254
Alw21I	GWGCWC	3 cut(s)	576, 1545, 1995
Alw26I	GTCTC	4 cut(s)	170, 482, 758, 2506
AlwI	GGATC	5 cut(s)	1217, 1262, 1475, 1868, 2449
AoxI	GGCC	9 cut(s)	21, 76, 349, 845, 941, 1030, 1075, 1985, 2515
ApaI	GGGCCC	1 cut(s)	2519
ApeKI	GCWGC	8 cut(s)	106, 292, 986, 1718, 1787, 1790, 1930, 2025
ApoI	RAATTY	1 cut(s)	860
AseI	ATTAAT	2 cut(s)	1559, 2577
Asp718I	GGTACC	1 cut(s)	11
AspLEI	GCGC	3 cut(s)	206, 1206, 1431
AspS9I	GGNCC	7 cut(s)	71, 349, 809, 1829, 1849, 2515, 2516
AsuC2I	CCSGG	3 cut(s)	25, 75, 557
AvaII	GGWCC	4 cut(s)	71, 809, 1829, 1849
BaeGI	GKGCMC	1 cut(s)	2519
BaeI	ACNNNNGTAYC	2 cut(s)	2477, 2510
BalI	TGGCCA	3 cut(s)	847, 943, 1032
BanI	GGYRCC	1 cut(s)	11
BanII	GRGCYC	4 cut(s)	576, 720, 1545, 2519
BbsI	GAAGAC	4 cut(s)	533, 1386, 1856, 2666
Bbv12I	GWGCWC	3 cut(s)	576, 1545, 1995
BbvCI	CCTCAGC	1 cut(s)	1134
BbvI	GCAGC	8 cut(s)	93, 304, 973, 1730, 1777, 1799, 1942, 2012
BceAI	ACGGC	1 cut(s)	1062
BciT130I	CCWGG	6 cut(s)	50, 80, 241, 648, 1252, 1314
BclI	TGATCA	1 cut(s)	1882
BcnI	CCSGG	3 cut(s)	25, 75, 557
BcoDI	GTCTC	4 cut(s)	170, 482, 758, 2506
BfaI	CTAG	3 cut(s)	675, 1179, 1473
BfmI	CTRYAG	2 cut(s)	1398, 2418
BfoI	RGCGCY	1 cut(s)	1207
BfuAI	ACCTGC	2 cut(s)	965, 1272
BglI	GCCNNNNNGGC	1 cut(s)	940
BglII	AGATCT	1 cut(s)	2383
Bme1390I	CCNGG	9 cut(s)	25, 50, 75, 80, 241, 557, 648, 1252, 1314
Bme18I	GGWCC	4 cut(s)	71, 809, 1829, 1849
BmeRI	GACNNNNNGTC	2 cut(s)	219, 327
BmgT120I	GGNCC	7 cut(s)	71, 349, 809, 1829, 1849, 2515, 2516
BmiI	GGNNCC	5 cut(s)	13, 73, 350, 811, 2517
BmrFI	CCNGG	9 cut(s)	25, 50, 75, 80, 241, 557, 648, 1252, 1314
BmrI	ACTGGG	1 cut(s)	2318
BmsI	GCATC	8 cut(s)	79, 717, 961, 1141, 1891, 2047, 2521, 2738
BmuI	ACTGGG	1 cut(s)	2318
BoxI	GACNNNNGTC	3 cut(s)	69, 682, 1860
BpiI	GAAGAC	4 cut(s)	533, 1386, 1856, 2666
BplI	GAGNNNNNCTC	2 cut(s)	2474, 2506
BpmI	CTGGAG	2 cut(s)	71, 1253
Bpu10I	CCTNAGC	2 cut(s)	1134, 1989
BpuEI	CTTGAG	3 cut(s)	317, 1613, 2125
BpuMI	CCSGG	3 cut(s)	25, 75, 557
BsaAI	YACGTR	1 cut(s)	886
BsaHI	GRCGYC	2 cut(s)	66, 416
BsaI	GGTCTC	2 cut(s)	170, 2506
BsaJI	CCNNGG	4 cut(s)	207, 461, 556, 955
BsaXI	ACNNNNNCTCC	6 cut(s)	239, 269, 396, 426, 697, 727
Bsc4I	CCNNNNNNNGG	5 cut(s)	196, 957, 1257, 1300, 1346
Bse118I	RCCGGY	1 cut(s)	164
Bse1I	ACTGG	7 cut(s)	38, 598, 935, 944, 1033, 1236, 2324
Bse3DI	GCAATG	3 cut(s)	489, 1205, 2355
BseBI	CCWGG	6 cut(s)	50, 80, 241, 648, 1252, 1314
BseDI	CCNNGG	4 cut(s)	207, 461, 556, 955
BseLI	CCNNNNNNNGG	5 cut(s)	196, 957, 1257, 1300, 1346
BseMI	GCAATG	3 cut(s)	489, 1205, 2355
BseMII	CTCAG	7 cut(s)	326, 381, 1125, 1410, 1692, 1980, 2301
BseNI	ACTGG	7 cut(s)	38, 598, 935, 944, 1033, 1236, 2324
BseRI	GAGGAG	5 cut(s)	167, 232, 1151, 2347, 2350
BseSI	GKGCMC	1 cut(s)	2519
BseXI	GCAGC	8 cut(s)	93, 304, 973, 1730, 1777, 1799, 1942, 2012
BseYI	CCCAGC	2 cut(s)	2637, 2673
BsgI	GTGCAG	1 cut(s)	765
Bsh1236I	CGCG	4 cut(s)	204, 209, 582, 2272
Bsh1285I	CGRYCG	1 cut(s)	580
BshFI	GGCC	9 cut(s)	23, 78, 351, 847, 943, 1032, 1077, 1987, 2517
BshNI	GGYRCC	1 cut(s)	11
BsiEI	CGRYCG	1 cut(s)	580
BsiHKAI	GWGCWC	3 cut(s)	576, 1545, 1995
BsiSI	CCGG	5 cut(s)	5, 24, 75, 165, 556
BslFI	GGGAC	3 cut(s)	57, 795, 2279
BslI	CCNNNNNNNGG	5 cut(s)	196, 957, 1257, 1300, 1346
BsmAI	GTCTC	4 cut(s)	170, 482, 758, 2506
BsmFI	GGGAC	3 cut(s)	57, 795, 2279
BsmI	GAATGC	1 cut(s)	2236
BsnI	GGCC	9 cut(s)	23, 78, 351, 847, 943, 1032, 1077, 1987, 2517
Bso31I	GGTCTC	2 cut(s)	170, 2506
Bsp120I	GGGCCC	1 cut(s)	2515
Bsp1286I	GDGCHC	5 cut(s)	576, 720, 1545, 1995, 2519
Bsp19I	CCATGG	1 cut(s)	955
Bsp68I	TCGCGA	1 cut(s)	582
BspACI	CCGC	9 cut(s)	190, 207, 209, 224, 262, 352, 1294, 1827, 2272
BspANI	GGCC	9 cut(s)	23, 78, 351, 847, 943, 1032, 1077, 1987, 2517
BspCNI	CTCAG	7 cut(s)	325, 382, 1126, 1411, 1693, 1981, 2300
BspFNI	CGCG	4 cut(s)	204, 209, 582, 2272
BspLI	GGNNCC	5 cut(s)	13, 73, 350, 811, 2517
BspMAI	CTGCAG	1 cut(s)	1402
BspMI	ACCTGC	2 cut(s)	965, 1272
BspPI	GGATC	5 cut(s)	1217, 1262, 1475, 1868, 2449
BspQI	GCTCTTC	1 cut(s)	1911
BspT107I	GGYRCC	1 cut(s)	11
BspTNI	GGTCTC	2 cut(s)	170, 2506
BsrBI	CCGCTC	1 cut(s)	192
BsrDI	GCAATG	3 cut(s)	489, 1205, 2355
BsrFI	RCCGGY	1 cut(s)	164
BsrI	ACTGG	7 cut(s)	38, 598, 935, 944, 1033, 1236, 2324
BssAI	RCCGGY	1 cut(s)	164
BssECI	CCNNGG	4 cut(s)	207, 461, 556, 955
BssNAI	GTATAC	1 cut(s)	800
BssNI	GRCGYC	2 cut(s)	66, 416
BssT1I	CCWWGG	1 cut(s)	955
Bst1107I	GTATAC	1 cut(s)	800
Bst2UI	CCWGG	6 cut(s)	50, 80, 241, 648, 1252, 1314
Bst4CI	ACNGT	3 cut(s)	2046, 2309, 2549
Bst6I	CTCTTC	3 cut(s)	756, 1911, 2693
BstACI	GRCGYC	2 cut(s)	66, 416
BstBAI	YACGTR	1 cut(s)	886
BstC8I	GCNNGC	6 cut(s)	260, 280, 644, 1545, 2023, 2781
BstDSI	CCRYGG	2 cut(s)	207, 955
BstFNI	CGCG	4 cut(s)	204, 209, 582, 2272
BstH2I	RGCGCY	1 cut(s)	1207
BstHHI	GCGC	3 cut(s)	206, 1206, 1431
BstMAI	GTCTC	4 cut(s)	170, 482, 758, 2506
BstMCI	CGRYCG	1 cut(s)	580
BstMWI	GCNNNNNNNGC	4 cut(s)	940, 1278, 2240, 2550
BstNI	CCWGG	6 cut(s)	50, 80, 241, 648, 1252, 1314
BstNSI	RCATGY	2 cut(s)	646, 1594
BstPAI	GACNNNNGTC	3 cut(s)	69, 682, 1860
BstSCI	CCNGG	9 cut(s)	23, 48, 73, 78, 239, 555, 646, 1250, 1312
BstSFI	CTRYAG	2 cut(s)	1398, 2418
BstSLI	GKGCMC	1 cut(s)	2519
BstUI	CGCG	4 cut(s)	204, 209, 582, 2272
BstV1I	GCAGC	8 cut(s)	93, 304, 973, 1730, 1777, 1799, 1942, 2012
BstV2I	GAAGAC	4 cut(s)	533, 1386, 1856, 2666
BstX2I	RGATCY	2 cut(s)	1480, 2383
BstXI	CCANNNNNNTGG	2 cut(s)	1040, 1413
BstYI	RGATCY	2 cut(s)	1480, 2383
BstZ17I	GTATAC	1 cut(s)	800
BsuRI	GGCC	9 cut(s)	23, 78, 351, 847, 943, 1032, 1077, 1987, 2517
BtgI	CCRYGG	2 cut(s)	207, 955
BtsI	GCAGTG	3 cut(s)	784, 1993, 2560
BtsIMutI	CAGTG	7 cut(s)	784, 1026, 1993, 2051, 2331, 2554, 2560
BtuMI	TCGCGA	1 cut(s)	582
BveI	ACCTGC	2 cut(s)	965, 1272
Cac8I	GCNNGC	6 cut(s)	260, 280, 644, 1545, 2023, 2781
CfoI	GCGC	3 cut(s)	206, 1206, 1431
Cfr10I	RCCGGY	1 cut(s)	164
Cfr13I	GGNCC	7 cut(s)	71, 349, 809, 1829, 1849, 2515, 2516
Cfr42I	CCGCGG	1 cut(s)	210
CseI	GACGC	4 cut(s)	317, 405, 488, 1109
CsiI	ACCWGGT	1 cut(s)	239
Csp6I	GTAC	5 cut(s)	12, 142, 1013, 2452, 2669
CspCI	CAANNNNNGTGG	2 cut(s)	176, 211
CviQI	GTAC	5 cut(s)	12, 142, 1013, 2452, 2669
DraI	TTTAAA	3 cut(s)	1008, 1068, 2767
DraIII	CACNNNGTG	1 cut(s)	743
DriI	GACNNNNNGTC	2 cut(s)	219, 327
EaeI	YGGCCR	4 cut(s)	21, 845, 941, 1030
Eam1104I	CTCTTC	3 cut(s)	756, 1911, 2693
Eam1105I	GACNNNNNGTC	2 cut(s)	219, 327
EarI	CTCTTC	3 cut(s)	756, 1911, 2693
EciI	GGCGGA	1 cut(s)	277
Ecl136II	GAGCTC	2 cut(s)	574, 1543
Eco130I	CCWWGG	1 cut(s)	955
Eco24I	GRGCYC	4 cut(s)	576, 720, 1545, 2519
Eco31I	GGTCTC	2 cut(s)	170, 2506
Eco47I	GGWCC	4 cut(s)	71, 809, 1829, 1849
Eco53kI	GAGCTC	2 cut(s)	574, 1543
Eco57I	CTGAAG	4 cut(s)	112, 1931, 2061, 2217
EcoICRI	GAGCTC	2 cut(s)	574, 1543
EcoO109I	RGGNCCY	2 cut(s)	1849, 2516
EcoRII	CCWGG	6 cut(s)	48, 78, 239, 646, 1250, 1312
EcoT14I	CCWWGG	1 cut(s)	955
EcoT38I	GRGCYC	4 cut(s)	576, 720, 1545, 2519
ErhI	CCWWGG	1 cut(s)	955
FaqI	GGGAC	3 cut(s)	57, 795, 2279
FauI	CCCGC	1 cut(s)	1301
FbaI	TGATCA	1 cut(s)	1882
FblI	GTMKAC	2 cut(s)	84, 799
FriOI	GRGCYC	4 cut(s)	576, 720, 1545, 2519
FspBI	CTAG	3 cut(s)	675, 1179, 1473
GlaI	GCGC	3 cut(s)	205, 1205, 1430
GsaI	CCCAGC	2 cut(s)	2641, 2677
GsuI	CTGGAG	2 cut(s)	71, 1253
HaeII	RGCGCY	1 cut(s)	1207
HaeIII	GGCC	9 cut(s)	23, 78, 351, 847, 943, 1032, 1077, 1987, 2517
HapII	CCGG	5 cut(s)	5, 24, 75, 165, 556
HgaI	GACGC	4 cut(s)	317, 405, 488, 1109
HhaI	GCGC	3 cut(s)	206, 1206, 1431
Hin1I	GRCGYC	2 cut(s)	66, 416
Hin6I	GCGC	3 cut(s)	204, 1204, 1429
HinP1I	GCGC	3 cut(s)	204, 1204, 1429
HincII	GTYRAC	4 cut(s)	85, 478, 2463, 2605
HindII	GTYRAC	4 cut(s)	85, 478, 2463, 2605
HindIII	AAGCTT	1 cut(s)	1913
HpaII	CCGG	5 cut(s)	5, 24, 75, 165, 556
Hpy166II	GTNNAC	8 cut(s)	85, 478, 800, 914, 1802, 2463, 2605, 2791
Hpy188III	TCNNGA	8 cut(s)	62, 113, 335, 581, 1574, 1700, 2013, 2482
Hpy8I	GTNNAC	8 cut(s)	85, 478, 800, 914, 1802, 2463, 2605, 2791
Hpy99I	CGWCG	8 cut(s)	68, 71, 89, 103, 139, 217, 333, 1125
HpyAV	CCTTC	6 cut(s)	394, 502, 743, 2192, 2432, 2642
HpyCH4III	ACNGT	3 cut(s)	2046, 2309, 2549
HpyCH4IV	ACGT	4 cut(s)	66, 696, 885, 2663
HpyF10VI	GCNNNNNNNGC	4 cut(s)	940, 1278, 2240, 2550
HpySE526I	ACGT	4 cut(s)	66, 696, 885, 2663
Hsp92I	GRCGYC	2 cut(s)	66, 416
HspAI	GCGC	3 cut(s)	204, 1204, 1429
KpnI	GGTACC	1 cut(s)	15
Ksp22I	TGATCA	1 cut(s)	1882
KspI	CCGCGG	1 cut(s)	210
LguI	GCTCTTC	1 cut(s)	1911
LmnI	GCTCC	4 cut(s)	571, 1057, 1234, 2066
Lsp1109I	GCAGC	8 cut(s)	93, 304, 973, 1730, 1777, 1799, 1942, 2012
LweI	GCATC	8 cut(s)	79, 717, 961, 1141, 1891, 2047, 2521, 2738
MabI	ACCWGGT	1 cut(s)	239
MaeI	CTAG	3 cut(s)	675, 1179, 1473
MaeII	ACGT	4 cut(s)	66, 696, 885, 2663
MaeIII	GTNAC	4 cut(s)	44, 122, 977, 2722
MbiI	CCGCTC	1 cut(s)	192
MflI	RGATCY	2 cut(s)	1480, 2383
MhlI	GDGCHC	5 cut(s)	576, 720, 1545, 1995, 2519
MlsI	TGGCCA	3 cut(s)	847, 943, 1032
MluCI	AATT	6 cut(s)	860, 1305, 1560, 1581, 2166, 2578
MluNI	TGGCCA	3 cut(s)	847, 943, 1032
MlyI	GAGTC	3 cut(s)	229, 578, 974
MmeI	TCCRAC	5 cut(s)	158, 225, 357, 1035, 1103
Mox20I	TGGCCA	3 cut(s)	847, 943, 1032
MscI	TGGCCA	3 cut(s)	847, 943, 1032
MseI	TTAA	9 cut(s)	468, 533, 606, 1007, 1067, 1535, 1559, 2577, 2766
MslI	CAYNNNNRTG	2 cut(s)	725, 2360
Msp20I	TGGCCA	3 cut(s)	847, 943, 1032
MspA1I	CMGCKG	3 cut(s)	209, 1790, 2025
MspI	CCGG	5 cut(s)	5, 24, 75, 165, 556
MspR9I	CCNGG	9 cut(s)	25, 50, 75, 80, 241, 557, 648, 1252, 1314
Mva1269I	GAATGC	1 cut(s)	2236
MvaI	CCWGG	6 cut(s)	50, 80, 241, 648, 1252, 1314
MvnI	CGCG	4 cut(s)	204, 209, 582, 2272
MwoI	GCNNNNNNNGC	4 cut(s)	940, 1278, 2240, 2550
NciI	CCSGG	3 cut(s)	25, 75, 557
NcoI	CCATGG	1 cut(s)	955
NlaIV	GGNNCC	5 cut(s)	13, 73, 350, 811, 2517
NmeAIII	GCCGAG	1 cut(s)	486
NmuCI	GTSAC	2 cut(s)	122, 977
NruI	TCGCGA	1 cut(s)	582
NspI	RCATGY	2 cut(s)	646, 1594
PaeI	GCATGC	1 cut(s)	646
PaqCI	CACCTGC	1 cut(s)	965
PciI	ACATGT	1 cut(s)	1590
PciSI	GCTCTTC	1 cut(s)	1911
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PctI	GAATGC	1 cut(s)	2236
PfeI	GAWTC	9 cut(s)	58, 250, 1218, 1459, 2072, 2081, 2087, 2099, 2192
PflMI	CCANNNNNTGG	1 cut(s)	1346
PfoI	TCCNGGA	1 cut(s)	1312
PleI	GAGTC	3 cut(s)	228, 578, 974
PpsI	GAGTC	3 cut(s)	228, 578, 974
Ppu21I	YACGTR	1 cut(s)	886
PpuMI	RGGWCCY	1 cut(s)	1849
PscI	ACATGT	1 cut(s)	1590
PshAI	GACNNNNGTC	3 cut(s)	69, 682, 1860
PshBI	ATTAAT	2 cut(s)	1559, 2577
PsiI	TTATAA	1 cut(s)	497
Psp124BI	GAGCTC	2 cut(s)	576, 1545
Psp5II	RGGWCCY	1 cut(s)	1849
Psp6I	CCWGG	6 cut(s)	48, 78, 239, 646, 1250, 1312
PspFI	CCCAGC	2 cut(s)	2637, 2673
PspGI	CCWGG	6 cut(s)	48, 78, 239, 646, 1250, 1312
PspN4I	GGNNCC	5 cut(s)	13, 73, 350, 811, 2517
PspOMI	GGGCCC	1 cut(s)	2515
PspPI	GGNCC	7 cut(s)	71, 349, 809, 1829, 1849, 2515, 2516
PspPPI	RGGWCCY	1 cut(s)	1849
PstI	CTGCAG	1 cut(s)	1402
PsuI	RGATCY	2 cut(s)	1480, 2383
PvuII	CAGCTG	2 cut(s)	1790, 2025
RruI	TCGCGA	1 cut(s)	582
RsaI	GTAC	5 cut(s)	13, 143, 1014, 2453, 2670
RsaNI	GTAC	5 cut(s)	12, 142, 1013, 2452, 2669
RseI	CAYNNNNRTG	2 cut(s)	725, 2360
SacI	GAGCTC	2 cut(s)	576, 1545
SacII	CCGCGG	1 cut(s)	210
SalI	GTCGAC	1 cut(s)	83
SapI	GCTCTTC	1 cut(s)	1911
SaqAI	TTAA	9 cut(s)	468, 533, 606, 1007, 1067, 1535, 1559, 2577, 2766
Sau96I	GGNCC	7 cut(s)	71, 349, 809, 1829, 1849, 2515, 2516
SchI	GAGTC	3 cut(s)	229, 578, 974
ScrFI	CCNGG	9 cut(s)	25, 50, 75, 80, 241, 557, 648, 1252, 1314
SduI	GDGCHC	5 cut(s)	576, 720, 1545, 1995, 2519
SexAI	ACCWGGT	1 cut(s)	239
SfaNI	GCATC	8 cut(s)	79, 717, 961, 1141, 1891, 2047, 2521, 2738
SfcI	CTRYAG	2 cut(s)	1398, 2418
Sfr303I	CCGCGG	1 cut(s)	210
SgrBI	CCGCGG	1 cut(s)	210
SinI	GGWCC	4 cut(s)	71, 809, 1829, 1849
SmiMI	CAYNNNNRTG	2 cut(s)	725, 2360
SmlI	CTYRAG	3 cut(s)	296, 1628, 2104
SmoI	CTYRAG	3 cut(s)	296, 1628, 2104
SphI	GCATGC	1 cut(s)	646
Sse9I	AATT	6 cut(s)	860, 1305, 1560, 1581, 2166, 2578
SsiI	CCGC	9 cut(s)	190, 207, 209, 224, 262, 352, 1294, 1827, 2272
SspMI	CTAG	3 cut(s)	675, 1179, 1473
SstI	GAGCTC	2 cut(s)	576, 1545
StyD4I	CCNGG	9 cut(s)	23, 48, 73, 78, 239, 555, 646, 1250, 1312
StyI	CCWWGG	1 cut(s)	955
TaaI	ACNGT	3 cut(s)	2046, 2309, 2549
TaiI	ACGT	4 cut(s)	69, 699, 888, 2666
TaqII	GACCGA	3 cut(s)	59, 194, 566
TasI	AATT	6 cut(s)	860, 1305, 1560, 1581, 2166, 2578
TauI	GCSGC	3 cut(s)	209, 212, 354
TfiI	GAWTC	9 cut(s)	58, 250, 1218, 1459, 2072, 2081, 2087, 2099, 2192
Tru1I	TTAA	9 cut(s)	468, 533, 606, 1007, 1067, 1535, 1559, 2577, 2766
Tru9I	TTAA	9 cut(s)	468, 533, 606, 1007, 1067, 1535, 1559, 2577, 2766
TscAI	CASTG	7 cut(s)	784, 1033, 2000, 2051, 2331, 2554, 2560
TseFI	GTSAC	2 cut(s)	122, 977
TseI	GCWGC	8 cut(s)	106, 292, 986, 1718, 1787, 1790, 1930, 2025
Tsp45I	GTSAC	2 cut(s)	122, 977
TspDTI	ATGAA	5 cut(s)	533, 1107, 1276, 1729, 1744
TspGWI	ACGGA	1 cut(s)	463
TspRI	CASTG	7 cut(s)	784, 1033, 2000, 2051, 2331, 2554, 2560
Van91I	CCANNNNNTGG	1 cut(s)	1346
VpaK11BI	GGWCC	4 cut(s)	71, 809, 1829, 1849
VspI	ATTAAT	2 cut(s)	1559, 2577
XapI	RAATTY	1 cut(s)	860
XceI	RCATGY	2 cut(s)	646, 1594
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2309
XmiI	GTMKAC	2 cut(s)	84, 799
XspI	CTAG	3 cut(s)	675, 1179, 1473
ZraI	GACGTC	1 cut(s)	67

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.