Rh2DG055100

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0012557
Physical Location & Seq
Forward (+)
4003132 .. 4009847
6716 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG055100.1

Sequence Viewer

Length: 1635 bp
ATGCCAGATTTAAGAAGTGGAGTTCGGCGATCAAAGAGGATCAACAATGTCCAGGAAAATCCTGCTGTTTTAGTTCCAGCTGCACGGACTGGTGCAGGAAAAGGGTTGACTGGTAGAGGTAGGGGTAGAGGGTCTAGAGCCATGAATCAAGGTAAGAATTCCAAGCTGTTTGGTGCTGGAGTTGGTGGCCAAGGGAATGCAGGTTTGGATTTACCAAAAAGAGATTTGGTGGCGGTTCACGATGAATTGGTAGATCAGAAAGGTGCACAAAAATTGACTGCTATTGAGGATGAAGGGAGCAGTAGTCCACTTCCCGAAAGAGTACAGATTGGAAACTCCCCCATGTACAAGTTGGATAGAAAGCTGGGAAAAGGGGGCTTTGGACAAGTTTATGTAGGAAGAAGGGTGACAGGAGGATATGGGGGCTCTGGGCCTGAGGCCTTAGAGGTTGCTTTAAAGCTTGAAGGTCGAAACAGTAAAGGGTGCAGTCATGGCCCTCCTTATGAGTGGCAAGTATACAGCTCCCTTAATGGATGTTACGGAGTTCCCCACGTTCATTACAAAGGTCAACAAGGAGAATACTATATCCTGGTCATGGATATGCTAGGCCCCAGTTTATGGGATGTTTGGAATCGCAATCAGTTGCTGTCTGAAGAGATGGTTGCTTGTATAGCGGTGGAGGCAATCTCAATTCTAGAGCAGCTTCATATCAAAGGTTTTGTGCATGGAGACGTTAAGCCAGAAAACTTTTTGCTTGGTCAACCTGGAACACCCAATGATAAGAAGTTATATCTTGTTGACCTTGGTTTGGCTTCAAGATGGAAGGAAACATCCGGACGTCATGTCGATTATGATCAAAAACCTGATGTTTTCAGGGGAACTGTTCGTTATGCAAGTGTACATGCTCATTTAGGCAGGACAGGGAGCCGAAGGGATGATCTTGAGTCATTAGCTTATACCCTTATATTTCTCCTTAGAGGCAAACTTCCTTGGCAAGGTTACAATGGGGAAAACAAAGGATTTCTTGTTTGCAAGAAGAAGATGGCAACTTCTCCTGAGATGCTATGTGGCTCATGTCCTCCTCCTTTTCAACAGTTTCTTGAGTTGGTGACCAATATGAAATTCGATGAAGAACCAAATTACTTAAAACTAATTTCTCTGTTTGATAACAACATTAATGTGAATGCTGCTCTTCGACCTATAAGAACTGATGGAGCTGCCAAGGTGGGCCAAAAAAGGGGAAGGTTGTTTCTTGAATCAGAAGATAGTGAGCAACCCAGGAAAAAAGTTAGACTAGGTTGCCCAGCCAATCAGTGGATCTCAGTCTATAATACCAGACCGTCGATGAAGCAAAGGTATCATTACAATGTTATGGACGTGAGAGTGGACCAGCACATTGACAAAGGAAAGGAAGATGGTTTGTATATTAGCTGTGTCGCTTCAGCTGCGAATATGTGGGCTATAGTCATGGATGCAGGGACAGGTTTCACATCCCAAGTTTATGAATTATCTCCTGTTTTCTTGCACAAGGAGTGGATAATGGAACAGTGGGACAAGAACTACTATATCACTTCACTTGCTGGCGCAGGCAACGGCAGTGCCCTGGTGGTAATGTCCCAAGGTATGTCAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0007154 GO:0007165 GO:0007166 GO:0007267 GO:0007346 GO:0008150 GO:0008152 GO:0008360 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010564 GO:0010604 GO:0015630 GO:0016055 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019222 GO:0019538 GO:0022603 GO:0022604 GO:0023052 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032879 GO:0032886 GO:0033043 GO:0035567 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051493 GO:0051716 GO:0051726 GO:0060069 GO:0060255 GO:0060341 GO:0061136 GO:0065007 GO:0065008 GO:0070507 GO:0071704 GO:0080090 GO:0098657 GO:0140096 GO:0198738 GO:1901564 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1905114 GO:2000058 GO:2000060
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

544

Amino Acids

60.15

Weight (kDa)

9.11

Isoelectric Point (pI)

39.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 116 - 346 2e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 117 - 352 1.8e-06 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 196 - 323 8.4e-09 Fungal protein kinase
DUF7477 PF24289 408 - 542 6.7e-69 Domain of unknown function (DUF7477)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012557)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g05050 FvH4_1g05050 FvH4_1g05050
malus_domestica MD02G1048800.v1.1 MD15G1187100.v1.1
prunus_persica Prupe.7G229400_v2.0.a1
pyrus_communis pycom02g04090 pycom15g16760
rosa_chinensis RchiOBHm_Chr2g0090661
rosa_laevigata RLG00000016134
rosa_multiflora Rmu_sc0016852.1_g000008
rosa_roxburghii Rroxscaffold_2G00150900
rosa_rugosa Rorug02G0009900 Rorug02G0009900
rosa_samantha Rh2AG055800 Rh2BG054200 Rh2CG056500 Rh2DG055100
rosa_wichuraiana Rw2G004700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 841
Acc36I ACCTGC 1 cut(s) 191
AccB7I CCANNNNNTGG 2 cut(s) 618, 1314
AccI GTMKAC 1 cut(s) 516
AccIII TCCGGA 1 cut(s) 833
AciI CCGC 2 cut(s) 233, 674
AclWI GGATC 2 cut(s) 47, 1325
AcoI YGGCCR 1 cut(s) 187
AcsI RAATTY 2 cut(s) 157, 1121
AcuI CTGAAG 2 cut(s) 672, 1425
AcyI GRCGYC 1 cut(s) 838
AfaI GTAC 3 cut(s) 324, 347, 900
AfiI CCNNNNNNNGG 6 cut(s) 595, 618, 808, 995, 1237, 1314
AgsI TTSAA 4 cut(s) 464, 816, 1091, 1256
AhdI GACNNNNNGTC 1 cut(s) 842
AjiI CACGTC 1 cut(s) 1378
AjnI CCWGG 5 cut(s) 51, 588, 763, 1277, 1602
AjuI GAANNNNNNNTTGG 4 cut(s) 188, 220, 1106, 1138
Alw21I GWGCWC 1 cut(s) 268
Alw26I GTCTC 1 cut(s) 723
Alw44I GTGCAC 1 cut(s) 264
AlwI GGATC 2 cut(s) 47, 1325
AlwNI CAGNNNCTG 1 cut(s) 646
Aor13HI TCCGGA 1 cut(s) 833
AoxI GGCC 6 cut(s) 187, 431, 438, 493, 607, 1228
ApaLI GTGCAC 1 cut(s) 264
ApeKI GCWGC 5 cut(s) 80, 700, 1187, 1217, 1445
ApoI RAATTY 2 cut(s) 157, 1121
AseI ATTAAT 1 cut(s) 1176
AspLEI GCGC 1 cut(s) 1586
AspS9I GGNCC 5 cut(s) 431, 494, 608, 1228, 1387
AsuHPI GGTGA 2 cut(s) 418, 1120
AvaII GGWCC 1 cut(s) 1387
AxyI CCTNAGG 1 cut(s) 435
BaeGI GKGCMC 2 cut(s) 268, 1603
BalI TGGCCA 1 cut(s) 189
BanII GRGCYC 1 cut(s) 428
Bbv12I GWGCWC 1 cut(s) 268
BbvI GCAGC 5 cut(s) 67, 712, 1174, 1204, 1432
BccI CCATC 5 cut(s) 652, 813, 1036, 1205, 1409
BceAI ACGGC 1 cut(s) 1609
BciT130I CCWGG 5 cut(s) 53, 590, 765, 1279, 1604
BclI TGATCA 1 cut(s) 853
BcoDI GTCTC 1 cut(s) 723
BfaI CTAG 4 cut(s) 135, 605, 695, 1295
BfmI CTRYAG 1 cut(s) 1461
BfuAI ACCTGC 1 cut(s) 191
BisI GCNGC 5 cut(s) 81, 701, 1188, 1218, 1446
BlsI GCNGC 5 cut(s) 82, 702, 1189, 1219, 1447
Bme1390I CCNGG 5 cut(s) 53, 590, 765, 1279, 1604
Bme18I GGWCC 1 cut(s) 1387
BmeRI GACNNNNNGTC 1 cut(s) 842
BmgBI CACGTC 1 cut(s) 1378
BmgT120I GGNCC 5 cut(s) 431, 494, 608, 1228, 1387
BmiI GGNNCC 2 cut(s) 610, 926
BmrFI CCNGG 5 cut(s) 53, 590, 765, 1279, 1604
BmrI ACTGGG 1 cut(s) 606
BmsI GCATC 2 cut(s) 1050, 1462
BmuI ACTGGG 1 cut(s) 606
BplI GAGNNNNNCTC 2 cut(s) 671, 703
BpmI CTGGAG 1 cut(s) 198
BpuEI CTTGAG 2 cut(s) 962, 1121
BsaBI GATNNNNATC 1 cut(s) 852
BsaHI GRCGYC 1 cut(s) 838
BsaJI CCNNGG 7 cut(s) 190, 802, 989, 1221, 1277, 1602, 1618
BsaWI WCCGGW 1 cut(s) 833
BsaXI ACNNNNNCTCC 2 cut(s) 289, 319
Bsc4I CCNNNNNNNGG 6 cut(s) 595, 618, 808, 995, 1237, 1314
Bse1I ACTGG 3 cut(s) 94, 115, 612
Bse21I CCTNAGG 1 cut(s) 435
Bse8I GATNNNNATC 1 cut(s) 852
BseAI TCCGGA 1 cut(s) 833
BseBI CCWGG 5 cut(s) 53, 590, 765, 1279, 1604
BseDI CCNNGG 7 cut(s) 190, 802, 989, 1221, 1277, 1602, 1618
BseGI GGATG 7 cut(s) 295, 539, 628, 830, 940, 1477, 1490
BseJI GATNNNNATC 1 cut(s) 852
BseLI CCNNNNNNNGG 6 cut(s) 595, 618, 808, 995, 1237, 1314
BseMII CTCAG 3 cut(s) 426, 1047, 1335
BseNI ACTGG 3 cut(s) 94, 115, 612
BseRI GAGGAG 1 cut(s) 1071
BseSI GKGCMC 2 cut(s) 268, 1603
BseXI GCAGC 5 cut(s) 67, 712, 1174, 1204, 1432
BseYI CCCAGC 2 cut(s) 364, 1303
BsgI GTGCAG 3 cut(s) 66, 114, 505
BshFI GGCC 6 cut(s) 189, 433, 440, 495, 609, 1230
BsiHKAI GWGCWC 1 cut(s) 268
BsiSI CCGG 1 cut(s) 834
BslFI GGGAC 3 cut(s) 1492, 1565, 1600
BslI CCNNNNNNNGG 6 cut(s) 595, 618, 808, 995, 1237, 1314
BsmAI GTCTC 1 cut(s) 723
BsmBI CGTCTC 1 cut(s) 723
BsmFI GGGAC 3 cut(s) 1492, 1565, 1600
BsmI GAATGC 2 cut(s) 202, 1189
BsnI GGCC 6 cut(s) 189, 433, 440, 495, 609, 1230
Bsp1286I GDGCHC 3 cut(s) 268, 428, 1603
Bsp13I TCCGGA 1 cut(s) 833
Bsp1407I TGTACA 2 cut(s) 345, 898
Bsp143I GATC 6 cut(s) 29, 39, 253, 853, 937, 1317
BspACI CCGC 2 cut(s) 233, 674
BspANI GGCC 6 cut(s) 189, 433, 440, 495, 609, 1230
BspCNI CTCAG 3 cut(s) 427, 1048, 1334
BspEI TCCGGA 1 cut(s) 833
BspLI GGNNCC 2 cut(s) 610, 926
BspMI ACCTGC 1 cut(s) 191
BspPI GGATC 2 cut(s) 47, 1325
BspQI GCTCTTC 1 cut(s) 1197
BsrGI TGTACA 2 cut(s) 345, 898
BsrI ACTGG 3 cut(s) 94, 115, 612
BssECI CCNNGG 7 cut(s) 190, 802, 989, 1221, 1277, 1602, 1618
BssMI GATC 6 cut(s) 29, 39, 253, 853, 937, 1317
BssNAI GTATAC 1 cut(s) 517
BssNI GRCGYC 1 cut(s) 838
BssT1I CCWWGG 5 cut(s) 190, 802, 989, 1221, 1618
Bst1107I GTATAC 1 cut(s) 517
Bst2UI CCWGG 5 cut(s) 53, 590, 765, 1279, 1604
Bst4CI ACNGT 5 cut(s) 476, 883, 1095, 1341, 1548
Bst6I CTCTTC 2 cut(s) 648, 1197
BstACI GRCGYC 1 cut(s) 838
BstAUI TGTACA 2 cut(s) 345, 898
BstC8I GCNNGC 2 cut(s) 1582, 1588
BstDEI CTNAG 5 cut(s) 435, 442, 974, 1056, 1321
BstEII GGTNACC 1 cut(s) 1108
BstENI CCTNNNNNAGG 1 cut(s) 993
BstF5I GGATG 7 cut(s) 295, 539, 628, 830, 940, 1477, 1490
BstHHI GCGC 1 cut(s) 1586
BstKTI GATC 6 cut(s) 32, 42, 256, 856, 940, 1320
BstMAI GTCTC 1 cut(s) 723
BstMBI GATC 6 cut(s) 29, 39, 253, 853, 937, 1317
BstMWI GCNNNNNNNGC 4 cut(s) 492, 671, 680, 1445
BstNI CCWGG 5 cut(s) 53, 590, 765, 1279, 1604
BstNSI RCATGY 1 cut(s) 905
BstPI GGTNACC 1 cut(s) 1108
BstSCI CCNGG 5 cut(s) 51, 588, 763, 1277, 1602
BstSFI CTRYAG 1 cut(s) 1461
BstSLI GKGCMC 2 cut(s) 268, 1603
BstV1I GCAGC 5 cut(s) 67, 712, 1174, 1204, 1432
BstX2I RGATCY 1 cut(s) 1317
BstYI RGATCY 1 cut(s) 1317
BstZ17I GTATAC 1 cut(s) 517
Bsu36I CCTNAGG 1 cut(s) 435
BsuRI GGCC 6 cut(s) 189, 433, 440, 495, 609, 1230
BtrI CACGTC 1 cut(s) 1378
BtsCI GGATG 7 cut(s) 295, 539, 628, 830, 940, 1477, 1490
BtsI GCAGTG 1 cut(s) 1603
BtsIMutI CAGTG 3 cut(s) 1319, 1553, 1603
BveI ACCTGC 1 cut(s) 191
Cac8I GCNNGC 2 cut(s) 1582, 1588
CaiI CAGNNNCTG 1 cut(s) 646
CfoI GCGC 1 cut(s) 1586
Cfr13I GGNCC 5 cut(s) 431, 494, 608, 1228, 1387
Csp6I GTAC 3 cut(s) 323, 346, 899
CviAII CATG 9 cut(s) 142, 343, 491, 595, 725, 842, 902, 1074, 1468
CviQI GTAC 3 cut(s) 323, 346, 899
DdeI CTNAG 5 cut(s) 435, 442, 974, 1056, 1321
DpnI GATC 6 cut(s) 31, 41, 255, 855, 939, 1319
DpnII GATC 6 cut(s) 29, 39, 253, 853, 937, 1317
DraI TTTAAA 1 cut(s) 456
DriI GACNNNNNGTC 1 cut(s) 842
EaeI YGGCCR 1 cut(s) 187
Eam1104I CTCTTC 2 cut(s) 648, 1197
Eam1105I GACNNNNNGTC 1 cut(s) 842
EarI CTCTTC 2 cut(s) 648, 1197
Eco130I CCWWGG 5 cut(s) 190, 802, 989, 1221, 1618
Eco147I AGGCCT 1 cut(s) 440
Eco24I GRGCYC 1 cut(s) 428
Eco47I GGWCC 1 cut(s) 1387
Eco57I CTGAAG 2 cut(s) 672, 1425
Eco81I CCTNAGG 1 cut(s) 435
Eco91I GGTNACC 1 cut(s) 1108
EcoNI CCTNNNNNAGG 1 cut(s) 993
EcoO109I RGGNCCY 1 cut(s) 608
EcoO65I GGTNACC 1 cut(s) 1108
EcoRI GAATTC 1 cut(s) 157
EcoRII CCWGG 5 cut(s) 51, 588, 763, 1277, 1602
EcoT14I CCWWGG 5 cut(s) 190, 802, 989, 1221, 1618
EcoT38I GRGCYC 1 cut(s) 428
ErhI CCWWGG 5 cut(s) 190, 802, 989, 1221, 1618
Esp3I CGTCTC 1 cut(s) 723
FaeI CATG 9 cut(s) 145, 346, 494, 598, 728, 845, 905, 1077, 1471
FalI AAGNNNNNCTT 2 cut(s) 1008, 1040
FaqI GGGAC 3 cut(s) 1492, 1565, 1600
FatI CATG 9 cut(s) 141, 342, 490, 594, 724, 841, 901, 1073, 1467
FbaI TGATCA 1 cut(s) 853
FblI GTMKAC 1 cut(s) 516
Fnu4HI GCNGC 5 cut(s) 81, 701, 1188, 1218, 1446
FokI GGATG 7 cut(s) 302, 546, 635, 817, 947, 1477, 1484
FriOI GRGCYC 1 cut(s) 428
Fsp4HI GCNGC 5 cut(s) 81, 701, 1188, 1218, 1446
FspBI CTAG 4 cut(s) 135, 605, 695, 1295
GlaI GCGC 1 cut(s) 1585
GluI GCNGC 5 cut(s) 81, 701, 1188, 1218, 1446
GsaI CCCAGC 2 cut(s) 368, 1307
GsuI CTGGAG 1 cut(s) 198
HaeIII GGCC 6 cut(s) 189, 433, 440, 495, 609, 1230
HapII CCGG 1 cut(s) 834
HhaI GCGC 1 cut(s) 1586
Hin1I GRCGYC 1 cut(s) 838
Hin1II CATG 9 cut(s) 145, 346, 494, 598, 728, 845, 905, 1077, 1471
Hin6I GCGC 1 cut(s) 1584
HinP1I GCGC 1 cut(s) 1584
HincII GTYRAC 4 cut(s) 108, 569, 761, 799
HindII GTYRAC 4 cut(s) 108, 569, 761, 799
HindIII AAGCTT 1 cut(s) 458
HinfI GANTC 4 cut(s) 145, 631, 944, 1256
HpaII CCGG 1 cut(s) 834
HphI GGTGA 2 cut(s) 418, 1120
Hpy188I TCNGA 3 cut(s) 258, 652, 1261
Hpy99I CGWCG 1 cut(s) 1345
HpyAV CCTTC 6 cut(s) 287, 396, 458, 817, 924, 1236
HpyCH4III ACNGT 5 cut(s) 476, 883, 1095, 1341, 1548
HpyCH4IV ACGT 4 cut(s) 552, 732, 838, 1377
HpyF10VI GCNNNNNNNGC 4 cut(s) 492, 671, 680, 1445
HpyF3I CTNAG 5 cut(s) 435, 442, 974, 1056, 1321
HpySE526I ACGT 4 cut(s) 552, 732, 838, 1377
Hsp92I GRCGYC 1 cut(s) 838
Hsp92II CATG 9 cut(s) 145, 346, 494, 598, 728, 845, 905, 1077, 1471
HspAI GCGC 1 cut(s) 1584
Kpn2I TCCGGA 1 cut(s) 833
Ksp22I TGATCA 1 cut(s) 853
Kzo9I GATC 6 cut(s) 29, 39, 253, 853, 937, 1317
LguI GCTCTTC 1 cut(s) 1197
LmnI GCTCC 4 cut(s) 297, 527, 924, 1214
Lsp1109I GCAGC 5 cut(s) 67, 712, 1174, 1204, 1432
LweI GCATC 2 cut(s) 1050, 1462
MaeI CTAG 4 cut(s) 135, 605, 695, 1295
MaeII ACGT 4 cut(s) 552, 732, 838, 1377
MaeIII GTNAC 4 cut(s) 406, 536, 998, 1108
MalI GATC 6 cut(s) 31, 41, 255, 855, 939, 1319
MboI GATC 6 cut(s) 29, 39, 253, 853, 937, 1317
MboII GAAGA 8 cut(s) 411, 665, 1048, 1051, 1142, 1184, 1274, 1424
MflI RGATCY 1 cut(s) 1317
MhlI GDGCHC 3 cut(s) 268, 428, 1603
MlsI TGGCCA 1 cut(s) 189
MluCI AATT 8 cut(s) 157, 245, 272, 690, 1121, 1138, 1152, 1505
MluNI TGGCCA 1 cut(s) 189
MlyI GAGTC 1 cut(s) 953
MmeI TCCRAC 1 cut(s) 333
Mox20I TGGCCA 1 cut(s) 189
MroI TCCGGA 1 cut(s) 833
MscI TGGCCA 1 cut(s) 189
MseI TTAA 6 cut(s) 11, 455, 528, 735, 1145, 1176
MslI CAYNNNNRTG 3 cut(s) 599, 1178, 1365
Msp20I TGGCCA 1 cut(s) 189
MspA1I CMGCKG 2 cut(s) 80, 1445
MspI CCGG 1 cut(s) 834
MspR9I CCNGG 5 cut(s) 53, 590, 765, 1279, 1604
Mva1269I GAATGC 2 cut(s) 202, 1189
MvaI CCWGG 5 cut(s) 53, 590, 765, 1279, 1604
MwoI GCNNNNNNNGC 4 cut(s) 492, 671, 680, 1445
NdeII GATC 6 cut(s) 29, 39, 253, 853, 937, 1317
NlaIII CATG 9 cut(s) 145, 346, 494, 598, 728, 845, 905, 1077, 1471
NlaIV GGNNCC 2 cut(s) 610, 926
NmuCI GTSAC 2 cut(s) 406, 1108
NspI RCATGY 1 cut(s) 905
PceI AGGCCT 1 cut(s) 440
PciSI GCTCTTC 1 cut(s) 1197
PctI GAATGC 2 cut(s) 202, 1189
PfeI GAWTC 3 cut(s) 145, 631, 1256
PflMI CCANNNNNTGG 2 cut(s) 618, 1314
PfoI TCCNGGA 1 cut(s) 51
PkrI GCNGC 5 cut(s) 82, 702, 1189, 1219, 1447
PleI GAGTC 1 cut(s) 952
PpsI GAGTC 1 cut(s) 952
PshBI ATTAAT 1 cut(s) 1176
Psp6I CCWGG 5 cut(s) 51, 588, 763, 1277, 1602
PspEI GGTNACC 1 cut(s) 1108
PspFI CCCAGC 2 cut(s) 364, 1303
PspGI CCWGG 5 cut(s) 51, 588, 763, 1277, 1602
PspN4I GGNNCC 2 cut(s) 610, 926
PspPI GGNCC 5 cut(s) 431, 494, 608, 1228, 1387
PstNI CAGNNNCTG 1 cut(s) 646
PsuI RGATCY 1 cut(s) 1317
PvuII CAGCTG 2 cut(s) 80, 1445
RsaI GTAC 3 cut(s) 324, 347, 900
RsaNI GTAC 3 cut(s) 323, 346, 899
RseI CAYNNNNRTG 3 cut(s) 599, 1178, 1365
SapI GCTCTTC 1 cut(s) 1197
SaqAI TTAA 6 cut(s) 11, 455, 528, 735, 1145, 1176
SatI GCNGC 5 cut(s) 81, 701, 1188, 1218, 1446
Sau3AI GATC 6 cut(s) 29, 39, 253, 853, 937, 1317
Sau96I GGNCC 5 cut(s) 431, 494, 608, 1228, 1387
SchI GAGTC 1 cut(s) 953
ScrFI CCNGG 5 cut(s) 53, 590, 765, 1279, 1604
SduI GDGCHC 3 cut(s) 268, 428, 1603
SfaNI GCATC 2 cut(s) 1050, 1462
SfcI CTRYAG 1 cut(s) 1461
SinI GGWCC 1 cut(s) 1387
SmiMI CAYNNNNRTG 3 cut(s) 599, 1178, 1365
SmlI CTYRAG 2 cut(s) 941, 1100
SmoI CTYRAG 2 cut(s) 941, 1100
Sse9I AATT 8 cut(s) 157, 245, 272, 690, 1121, 1138, 1152, 1505
SseBI AGGCCT 1 cut(s) 440
SsiI CCGC 2 cut(s) 233, 674
SspMI CTAG 4 cut(s) 135, 605, 695, 1295
StuI AGGCCT 1 cut(s) 440
StyD4I CCNGG 5 cut(s) 51, 588, 763, 1277, 1602
StyI CCWWGG 5 cut(s) 190, 802, 989, 1221, 1618
TaaI ACNGT 5 cut(s) 476, 883, 1095, 1341, 1548
TaiI ACGT 4 cut(s) 555, 735, 841, 1380
TaqI TCGA 5 cut(s) 469, 846, 1125, 1195, 1343
TasI AATT 8 cut(s) 157, 245, 272, 690, 1121, 1138, 1152, 1505
TatI WGTACW 3 cut(s) 322, 345, 898
TfiI GAWTC 3 cut(s) 145, 631, 1256
Tru1I TTAA 6 cut(s) 11, 455, 528, 735, 1145, 1176
Tru9I TTAA 6 cut(s) 11, 455, 528, 735, 1145, 1176
TscAI CASTG 3 cut(s) 1319, 1553, 1603
TseFI GTSAC 2 cut(s) 406, 1108
TseI GCWGC 5 cut(s) 80, 700, 1187, 1217, 1445
Tsp45I GTSAC 2 cut(s) 406, 1108
TspDTI ATGAA 9 cut(s) 158, 258, 306, 545, 695, 1133, 1143, 1361, 1518
TspGWI ACGGA 2 cut(s) 100, 555
TspRI CASTG 3 cut(s) 1319, 1553, 1603
Van91I CCANNNNNTGG 2 cut(s) 618, 1314
VneI GTGCAC 1 cut(s) 264
VpaK11BI GGWCC 1 cut(s) 1387
VspI ATTAAT 1 cut(s) 1176
XagI CCTNNNNNAGG 1 cut(s) 993
XapI RAATTY 2 cut(s) 157, 1121
XbaI TCTAGA 2 cut(s) 134, 694
XceI RCATGY 1 cut(s) 905
XcmI CCANNNNNNNNNTGG 2 cut(s) 349, 1311
XmiI GTMKAC 1 cut(s) 516
XspI CTAG 4 cut(s) 135, 605, 695, 1295
ZraI GACGTC 1 cut(s) 839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.