Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0015872

Physical Location & Seq

Genomic Coordinates Reverse (-)

40942609 .. 40950345

Gene Structure 7737 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG325600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGTGGCCATCTCTGATCGGAAAAGCCAAGGAAGGAGGACTTGATGTGATTCAAACCTATGTGTTTTGGAACCTTCACGAGCCTCAACCGGGTCAGTACGATTTCAGTGGAAGATATGATCTAGTAAAGTTCATAAAGGAAATCCAAGCACAAGGGCTTTATGCTTGCCTTAGGATTGGACCATTCATTGAGAGTGAATGGACATATGGGGGTTTTCCATTTTGGCTGCATGATGTCCCAGGCATAGTTTACCGCACAGATAATGAACCCTTTAAGTTTTACATGCAAAATTTTACTACAAAAATAGTGAACTTGATGAAATCAGAGGGATTATATGCTTCACAAGGAGGTCCAATCATACTCTCGCAGATTGAAAATGAATATCAAAATGTGGAAGCAGCATTCCTCGAGAAAGGACCTGCCTACGTTCGATGGGCTGCAAAAATGGCAGTCGACCTCCAAACTGGTGTGCCATGGGTGATGTGCAAGCAGACTGATGCTCCTGATCCAGTGATCAATACCTGCAATGGAATGCAATGTGGGAAGACTTTTGGAGGACCAAACTCACCTAATAAACCCTCTATGTGGACAGAGAATTGGACGTCATTCTATCAAGTGTATGGCGGAGAACCATACATAAGATCTGCTGAAAATATTGCATTTCACGTTGCGCTTTTTATAGCTCGGATGAATGGAAGCTATGTAAACTACTACATGTATCATGGTGGAACTAACTTTGGAAGAACAAGCTCTGCATATGTCATAACAGGTTATTATGATCAAGCTCCGCTAGATGAATATGGTTTGTTAAGGCAACCCAAATGGGGTCATCTTAAGCAATTGCATGCTGCATTTAGAAACTGCTCGACAACTTTACTGCAGGGAATGAGAACTAATTTTTCTTTAGGTCAACTTCAAGAGGCCTATGTCTTTCAAGAAGAAAGTGCTGGAAGATGTGTTGCATTTCTAGTAAATAACGATGAAAAAACTAATGCTACTGTTCAATTTCGAAATATATCATACTACCTGATGCCAATGTCAATCAGCATTCTACCAGACTGTGAAAAGGTGATTTTCAACACTGCAAAGGTGAATACAAGTTCTAACAAAAGAATTACAAGATCAGCTCAAATCTTTGATTCAGTGGATAGTTGGGAGGGGTCTAAAGATGTCATCCAAAATTTTGAACCTACAATATCTCTACAATCGGATACACTACTTGAGCACATGAACGTGACCAAAGACAAATCTGATTATCTTTGGTATACTATGAGATTTCAGCACAACATTTCTTGCACTGAACCAGTACTTCGTGTAGAGTCTTTCGGACATGTAACACATGCTTTCGTGAATGGCATAAATACAGGAAATGCACATGGCAGTCATGATACCAAACAATTCATTATGGAGACTCCAGTTCTGTTAAACGATGGAAGTAACAATATTTCTTTGCTAAGCGTTATGGTTGGACTACCGGACTCGGGTGCTTTTCTTGAAAGCAAATTTGCTGGCTTGAAAAGAGTTGAAATTCACTGCAACGAAACCGATCAATTTTACAATTTCACTAACTATGCATGGGGATACCAGGTTGGGTTACTTGGAGAAAAGTTGCAAATATATAGAGAAGAAAATCTGGACAACATTGAATGGAACAATATTGAAGGCTATTTTAATCAATCACTGACTTGGTACATGACATTTTTCGATGCACCTGTGGGAAATGATCCAGTCGGCTTAAACCTTAGCTCAATGGCAAAGGGCGAAGCTTGGATTAATGGACAAAGTATTGGTCGATATTGGGTTTCATTCCTTACTTCGAAAGGCCAACCTTCACAATCGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009664 GO:0009791 GO:0009827 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0015925 GO:0016043 GO:0016787 GO:0016798 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0048046 GO:0048316 GO:0048354 GO:0048359 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

614

Amino Acids

69.71

Weight (kDa)

5.46

Isoelectric Point (pI)

45.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	1 - 284	2e-102	Glycosyl hydrolases family 35
Glyco_hydro_42	PF02449	6 - 131	1.7e-06	Beta-galactosidase
GHD	PF17834	307 - 364	1.3e-23	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	561 - 612	1.3e-15	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63800
fragaria_vesca	FvH4_1g25140 FvH4_1g25140
malus_domestica	MD15G1136500.v1.1
prunus_persica	Prupe.4G279500_v2.0.a1
pyrus_communis	pycom15g12310
rosa_chinensis	RchiOBHm_Chr2g0122851
rosa_laevigata	RLG00000018718
rosa_roxburghii	Rroxscaffold_2G00121120
rosa_rugosa	Rorug02G0242700
rosa_samantha	Rh2AG301500 Rh2BG309000 Rh2CG287600 Rh2DG325600
rosa_wichuraiana	Rw2G023920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	605
Acc36I	ACCTGC	2 cut(s)	427, 530
AccI	GTMKAC	2 cut(s)	453, 1265
AciI	CCGC	3 cut(s)	253, 624, 788
AclWI	GGATC	2 cut(s)	500, 1718
AcoI	YGGCCR	1 cut(s)	5
AcsI	RAATTY	4 cut(s)	289, 1180, 1502, 1527
AcyI	GRCGYC	1 cut(s)	602
AfaI	GTAC	3 cut(s)	98, 1308, 1691
AfiI	CCNNNNNNNGG	4 cut(s)	89, 585, 824, 1481
AflII	CTTAAG	1 cut(s)	833
AflIII	ACRYGT	2 cut(s)	714, 1330
AjnI	CCWGG	2 cut(s)	238, 1584
AluBI	AGCT	7 cut(s)	683, 699, 750, 785, 1127, 1746, 1766
AluI	AGCT	7 cut(s)	683, 699, 750, 785, 1127, 1746, 1766
Alw21I	GWGCWC	1 cut(s)	1227
Alw26I	GTCTC	1 cut(s)	1403
AlwI	GGATC	2 cut(s)	500, 1718
Ama87I	CYCGRG	2 cut(s)	407, 1480
AoxI	GGCC	3 cut(s)	5, 921, 1822
ApeKI	GCWGC	4 cut(s)	226, 398, 437, 848
ApoI	RAATTY	4 cut(s)	289, 1180, 1502, 1527
ArsI	GACNNNNNNTTYG	2 cut(s)	1774, 1806
AseI	ATTAAT	1 cut(s)	1773
AspLEI	GCGC	1 cut(s)	673
AspS9I	GGNCC	4 cut(s)	179, 350, 416, 557
AsuC2I	CCSGG	1 cut(s)	90
AsuHPI	GGTGA	4 cut(s)	490, 558, 1081, 1102
AsuII	TTCGAA	2 cut(s)	1009, 1817
AvaI	CYCGRG	2 cut(s)	407, 1480
AvaII	GGWCC	4 cut(s)	179, 350, 416, 557
AxyI	CCTNAGG	1 cut(s)	170
BalI	TGGCCA	1 cut(s)	7
BauI	CACGAG	1 cut(s)	77
BbsI	GAAGAC	1 cut(s)	551
Bbv12I	GWGCWC	1 cut(s)	1227
BbvI	GCAGC	4 cut(s)	213, 410, 424, 835
BccI	CCATC	3 cut(s)	16, 426, 1424
BciT130I	CCWGG	2 cut(s)	240, 1586
BciVI	GTATCC	2 cut(s)	1204, 1574
BclI	TGATCA	2 cut(s)	513, 778
BcnI	CCSGG	1 cut(s)	90
BcoDI	GTCTC	1 cut(s)	1403
BfaI	CTAG	3 cut(s)	122, 791, 968
BfmI	CTRYAG	1 cut(s)	878
BfrI	CTTAAG	1 cut(s)	833
BfuAI	ACCTGC	2 cut(s)	427, 530
BfuI	GTATCC	2 cut(s)	1204, 1574
BglII	AGATCT	1 cut(s)	641
BisI	GCNGC	4 cut(s)	227, 399, 438, 849
BlpI	GCTNAGC	1 cut(s)	1454
BlsI	GCNGC	4 cut(s)	228, 400, 439, 850
BmcAI	AGTACT	1 cut(s)	1308
Bme1390I	CCNGG	3 cut(s)	90, 240, 1586
Bme18I	GGWCC	4 cut(s)	179, 350, 416, 557
BmeT110I	CYCGRG	2 cut(s)	407, 1480
BmgT120I	GGNCC	4 cut(s)	179, 350, 416, 557
BmiI	GGNNCC	1 cut(s)	71
BmrFI	CCNGG	3 cut(s)	90, 240, 1586
BmsI	GCATC	3 cut(s)	487, 1020, 1696
BpiI	GAAGAC	1 cut(s)	551
BpmI	CTGGAG	1 cut(s)	1398
Bpu10I	CCTNAGC	1 cut(s)	1742
Bpu1102I	GCTNAGC	1 cut(s)	1454
Bpu14I	TTCGAA	2 cut(s)	1009, 1817
BpuEI	CTTGAG	1 cut(s)	1241
BpuMI	CCSGG	1 cut(s)	90
Bsa29I	ATCGAT	1 cut(s)	1838
BsaHI	GRCGYC	1 cut(s)	602
BsaJI	CCNNGG	3 cut(s)	27, 238, 473
BsaWI	WCCGGW	1 cut(s)	1474
BsaXI	ACNNNNNCTCC	2 cut(s)	484, 514
Bsc4I	CCNNNNNNNGG	4 cut(s)	89, 585, 824, 1481
Bse1I	ACTGG	5 cut(s)	469, 509, 1304, 1415, 1727
Bse21I	CCTNAGG	1 cut(s)	170
Bse3DI	GCAATG	2 cut(s)	532, 542
BseBI	CCWGG	2 cut(s)	240, 1586
BseCI	ATCGAT	1 cut(s)	1838
BseDI	CCNNGG	3 cut(s)	27, 238, 473
BseGI	GGATG	2 cut(s)	693, 1173
BseLI	CCNNNNNNNGG	4 cut(s)	89, 585, 824, 1481
BseMI	GCAATG	2 cut(s)	532, 542
BseNI	ACTGG	5 cut(s)	469, 509, 1304, 1415, 1727
BseXI	GCAGC	4 cut(s)	213, 410, 424, 835
BshFI	GGCC	3 cut(s)	7, 923, 1824
BshVI	ATCGAT	1 cut(s)	1838
BsiHKAI	GWGCWC	1 cut(s)	1227
BsiHKCI	CYCGRG	2 cut(s)	407, 1480
BsiSI	CCGG	2 cut(s)	89, 1475
BslFI	GGGAC	1 cut(s)	221
BslI	CCNNNNNNNGG	4 cut(s)	89, 585, 824, 1481
BsmAI	GTCTC	1 cut(s)	1403
BsmFI	GGGAC	1 cut(s)	221
BsmI	GAATGC	3 cut(s)	401, 537, 1047
BsnI	GGCC	3 cut(s)	7, 923, 1824
BsoBI	CYCGRG	2 cut(s)	407, 1480
Bsp119I	TTCGAA	2 cut(s)	1009, 1817
Bsp1286I	GDGCHC	1 cut(s)	1227
Bsp143I	GATC	9 cut(s)	15, 118, 505, 513, 641, 778, 1121, 1546, 1723
Bsp1720I	GCTNAGC	1 cut(s)	1454
Bsp19I	CCATGG	1 cut(s)	473
BspACI	CCGC	3 cut(s)	253, 624, 788
BspANI	GGCC	3 cut(s)	7, 923, 1824
BspDI	ATCGAT	1 cut(s)	1838
BspHI	TCATGA	1 cut(s)	1384
BspLI	GGNNCC	1 cut(s)	71
BspMAI	CTGCAG	1 cut(s)	882
BspMI	ACCTGC	2 cut(s)	427, 530
BspPI	GGATC	2 cut(s)	500, 1718
BspT104I	TTCGAA	2 cut(s)	1009, 1817
BspTI	CTTAAG	1 cut(s)	833
BsrDI	GCAATG	2 cut(s)	532, 542
BsrI	ACTGG	5 cut(s)	469, 509, 1304, 1415, 1727
BssECI	CCNNGG	3 cut(s)	27, 238, 473
BssMI	GATC	9 cut(s)	15, 118, 505, 513, 641, 778, 1121, 1546, 1723
BssNAI	GTATAC	1 cut(s)	1266
BssNI	GRCGYC	1 cut(s)	602
BssSI	CACGAG	1 cut(s)	77
BssT1I	CCWWGG	2 cut(s)	27, 473
Bst1107I	GTATAC	1 cut(s)	1266
Bst2BI	CACGAG	1 cut(s)	77
Bst2UI	CCWGG	2 cut(s)	240, 1586
Bst4CI	ACNGT	2 cut(s)	1000, 1061
BstACI	GRCGYC	1 cut(s)	602
BstAFI	CTTAAG	1 cut(s)	833
BstBI	TTCGAA	2 cut(s)	1009, 1817
BstC8I	GCNNGC	4 cut(s)	166, 488, 846, 1510
BstDEI	CTNAG	3 cut(s)	170, 1454, 1742
BstDSI	CCRYGG	1 cut(s)	473
BstF5I	GGATG	2 cut(s)	693, 1173
BstHHI	GCGC	1 cut(s)	673
BstKTI	GATC	9 cut(s)	18, 121, 508, 516, 644, 781, 1124, 1549, 1726
BstMAI	GTCTC	1 cut(s)	1403
BstMBI	GATC	9 cut(s)	15, 118, 505, 513, 641, 778, 1121, 1546, 1723
BstMWI	GCNNNNNNNGC	1 cut(s)	446
BstNI	CCWGG	2 cut(s)	240, 1586
BstNSI	RCATGY	5 cut(s)	286, 718, 848, 1334, 1343
BstSCI	CCNGG	3 cut(s)	88, 238, 1584
BstSFI	CTRYAG	1 cut(s)	878
BstV1I	GCAGC	4 cut(s)	213, 410, 424, 835
BstV2I	GAAGAC	1 cut(s)	551
BstX2I	RGATCY	1 cut(s)	641
BstYI	RGATCY	1 cut(s)	641
BstZ17I	GTATAC	1 cut(s)	1266
Bsu15I	ATCGAT	1 cut(s)	1838
Bsu36I	CCTNAGG	1 cut(s)	170
BsuI	GTATCC	2 cut(s)	1204, 1574
BsuRI	GGCC	3 cut(s)	7, 923, 1824
BsuTUI	ATCGAT	1 cut(s)	1838
BtgI	CCRYGG	1 cut(s)	473
BtsCI	GGATG	2 cut(s)	693, 1173
BtsI	GCAGTG	2 cut(s)	1080, 1531
BtsIMutI	CAGTG	7 cut(s)	112, 516, 1080, 1149, 1296, 1531, 1679
BveI	ACCTGC	2 cut(s)	427, 530
Cac8I	GCNNGC	4 cut(s)	166, 488, 846, 1510
CciI	TCATGA	1 cut(s)	1384
CfoI	GCGC	1 cut(s)	673
Cfr13I	GGNCC	4 cut(s)	179, 350, 416, 557
ClaI	ATCGAT	1 cut(s)	1838
CsiI	ACCWGGT	1 cut(s)	1584
Csp6I	GTAC	3 cut(s)	97, 1307, 1690
CviQI	GTAC	3 cut(s)	97, 1307, 1690
DdeI	CTNAG	3 cut(s)	170, 1454, 1742
DpnI	GATC	9 cut(s)	17, 120, 507, 515, 643, 780, 1123, 1548, 1725
DpnII	GATC	9 cut(s)	15, 118, 505, 513, 641, 778, 1121, 1546, 1723
EaeI	YGGCCR	1 cut(s)	5
EciI	GGCGGA	1 cut(s)	639
Eco130I	CCWWGG	2 cut(s)	27, 473
Eco147I	AGGCCT	1 cut(s)	923
Eco47I	GGWCC	4 cut(s)	179, 350, 416, 557
Eco81I	CCTNAGG	1 cut(s)	170
Eco88I	CYCGRG	2 cut(s)	407, 1480
EcoO109I	RGGNCCY	1 cut(s)	416
EcoRII	CCWGG	2 cut(s)	238, 1584
EcoT14I	CCWWGG	2 cut(s)	27, 473
EcoT22I	ATGCAT	1 cut(s)	1576
ErhI	CCWWGG	2 cut(s)	27, 473
FalI	AAGNNNNNCTT	2 cut(s)	24, 56
FaqI	GGGAC	1 cut(s)	221
FauNDI	CATATG	2 cut(s)	205, 757
FbaI	TGATCA	2 cut(s)	513, 778
FblI	GTMKAC	2 cut(s)	453, 1265
Fnu4HI	GCNGC	4 cut(s)	227, 399, 438, 849
FokI	GGATG	2 cut(s)	700, 1160
Fsp4HI	GCNGC	4 cut(s)	227, 399, 438, 849
FspBI	CTAG	3 cut(s)	122, 791, 968
GlaI	GCGC	1 cut(s)	672
GluI	GCNGC	4 cut(s)	227, 399, 438, 849
GsuI	CTGGAG	1 cut(s)	1398
HaeIII	GGCC	3 cut(s)	7, 923, 1824
HapII	CCGG	2 cut(s)	89, 1475
HhaI	GCGC	1 cut(s)	673
Hin1I	GRCGYC	1 cut(s)	602
Hin6I	GCGC	1 cut(s)	671
HinP1I	GCGC	1 cut(s)	671
HincII	GTYRAC	2 cut(s)	454, 911
HindII	GTYRAC	2 cut(s)	454, 911
HindIII	AAGCTT	1 cut(s)	1764
HinfI	GANTC	5 cut(s)	49, 1139, 1319, 1411, 1478
HpaII	CCGG	2 cut(s)	89, 1475
HphI	GGTGA	4 cut(s)	490, 558, 1081, 1102
Hpy166II	GTNNAC	7 cut(s)	250, 310, 454, 588, 706, 911, 1266
Hpy188I	TCNGA	7 cut(s)	15, 20, 325, 687, 1210, 1252, 1328
Hpy188III	TCNNGA	9 cut(s)	77, 409, 503, 917, 935, 1348, 1385, 1493, 1634
Hpy8I	GTNNAC	7 cut(s)	250, 310, 454, 588, 706, 911, 1266
HpyAV	CCTTC	4 cut(s)	26, 83, 1655, 1839
HpyCH4III	ACNGT	2 cut(s)	1000, 1061
HpyCH4IV	ACGT	4 cut(s)	426, 602, 666, 1233
HpyF10VI	GCNNNNNNNGC	1 cut(s)	446
HpyF3I	CTNAG	3 cut(s)	170, 1454, 1742
HpySE526I	ACGT	4 cut(s)	426, 602, 666, 1233
Hsp92I	GRCGYC	1 cut(s)	602
HspAI	GCGC	1 cut(s)	671
Ksp22I	TGATCA	2 cut(s)	513, 778
Kzo9I	GATC	9 cut(s)	15, 118, 505, 513, 641, 778, 1121, 1546, 1723
LmnI	GCTCC	2 cut(s)	505, 790
Lsp1109I	GCAGC	4 cut(s)	213, 410, 424, 835
LweI	GCATC	3 cut(s)	487, 1020, 1696
MabI	ACCWGGT	1 cut(s)	1584
MaeI	CTAG	3 cut(s)	122, 791, 968
MaeII	ACGT	4 cut(s)	426, 602, 666, 1233
MaeIII	GTNAC	4 cut(s)	1234, 1333, 1436, 1593
MalI	GATC	9 cut(s)	17, 120, 507, 515, 643, 780, 1123, 1548, 1725
MboI	GATC	9 cut(s)	15, 118, 505, 513, 641, 778, 1121, 1546, 1723
MboII	GAAGA	6 cut(s)	123, 556, 753, 950, 963, 1637
MfeI	CAATTG	1 cut(s)	839
MflI	RGATCY	1 cut(s)	641
MhlI	GDGCHC	1 cut(s)	1227
MlsI	TGGCCA	1 cut(s)	7
MluNI	TGGCCA	1 cut(s)	7
MlyI	GAGTC	3 cut(s)	1328, 1405, 1472
MmeI	TCCRAC	1 cut(s)	1447
Mox20I	TGGCCA	1 cut(s)	7
Mph1103I	ATGCAT	1 cut(s)	1576
MscI	TGGCCA	1 cut(s)	7
MseI	TTAA	7 cut(s)	273, 809, 834, 1424, 1671, 1736, 1773
MslI	CAYNNNNRTG	1 cut(s)	1232
Msp20I	TGGCCA	1 cut(s)	7
MspCI	CTTAAG	1 cut(s)	833
MspI	CCGG	2 cut(s)	89, 1475
MspR9I	CCNGG	3 cut(s)	90, 240, 1586
MunI	CAATTG	1 cut(s)	839
Mva1269I	GAATGC	3 cut(s)	401, 537, 1047
MvaI	CCWGG	2 cut(s)	240, 1586
MwoI	GCNNNNNNNGC	1 cut(s)	446
NciI	CCSGG	1 cut(s)	90
NcoI	CCATGG	1 cut(s)	473
NdeI	CATATG	2 cut(s)	205, 757
NdeII	GATC	9 cut(s)	15, 118, 505, 513, 641, 778, 1121, 1546, 1723
NlaIV	GGNNCC	1 cut(s)	71
NmuCI	GTSAC	1 cut(s)	1234
NsiI	ATGCAT	1 cut(s)	1576
NspI	RCATGY	5 cut(s)	286, 718, 848, 1334, 1343
NspV	TTCGAA	2 cut(s)	1009, 1817
PaeI	GCATGC	1 cut(s)	848
PaeR7I	CTCGAG	1 cut(s)	407
PagI	TCATGA	1 cut(s)	1384
PceI	AGGCCT	1 cut(s)	923
PciI	ACATGT	2 cut(s)	714, 1330
PctI	GAATGC	3 cut(s)	401, 537, 1047
PfeI	GAWTC	2 cut(s)	49, 1139
PkrI	GCNGC	4 cut(s)	228, 400, 439, 850
PleI	GAGTC	3 cut(s)	1327, 1405, 1472
PpsI	GAGTC	3 cut(s)	1327, 1405, 1472
PpuMI	RGGWCCY	1 cut(s)	416
PscI	ACATGT	2 cut(s)	714, 1330
PshBI	ATTAAT	1 cut(s)	1773
Psp5II	RGGWCCY	1 cut(s)	416
Psp6I	CCWGG	2 cut(s)	238, 1584
PspGI	CCWGG	2 cut(s)	238, 1584
PspN4I	GGNNCC	1 cut(s)	71
PspPI	GGNCC	4 cut(s)	179, 350, 416, 557
PspPPI	RGGWCCY	1 cut(s)	416
PstI	CTGCAG	1 cut(s)	882
PsuI	RGATCY	1 cut(s)	641
RsaI	GTAC	3 cut(s)	98, 1308, 1691
RsaNI	GTAC	3 cut(s)	97, 1307, 1690
RseI	CAYNNNNRTG	1 cut(s)	1232
SalI	GTCGAC	1 cut(s)	452
SaqAI	TTAA	7 cut(s)	273, 809, 834, 1424, 1671, 1736, 1773
SatI	GCNGC	4 cut(s)	227, 399, 438, 849
Sau3AI	GATC	9 cut(s)	15, 118, 505, 513, 641, 778, 1121, 1546, 1723
Sau96I	GGNCC	4 cut(s)	179, 350, 416, 557
ScaI	AGTACT	1 cut(s)	1308
SchI	GAGTC	3 cut(s)	1328, 1405, 1472
ScrFI	CCNGG	3 cut(s)	90, 240, 1586
SduI	GDGCHC	1 cut(s)	1227
SexAI	ACCWGGT	1 cut(s)	1584
SfaNI	GCATC	3 cut(s)	487, 1020, 1696
SfcI	CTRYAG	1 cut(s)	878
Sfr274I	CTCGAG	1 cut(s)	407
SfuI	TTCGAA	2 cut(s)	1009, 1817
SinI	GGWCC	4 cut(s)	179, 350, 416, 557
SlaI	CTCGAG	1 cut(s)	407
SmiMI	CAYNNNNRTG	1 cut(s)	1232
SmlI	CTYRAG	3 cut(s)	407, 833, 1220
SmoI	CTYRAG	3 cut(s)	407, 833, 1220
SphI	GCATGC	1 cut(s)	848
SseBI	AGGCCT	1 cut(s)	923
SsiI	CCGC	3 cut(s)	253, 624, 788
SspI	AATATT	3 cut(s)	655, 1444, 1657
SspMI	CTAG	3 cut(s)	122, 791, 968
StuI	AGGCCT	1 cut(s)	923
StyD4I	CCNGG	3 cut(s)	88, 238, 1584
StyI	CCWWGG	2 cut(s)	27, 473
TaaI	ACNGT	2 cut(s)	1000, 1061
TaiI	ACGT	4 cut(s)	429, 605, 669, 1236
TaqI	TCGA	9 cut(s)	408, 430, 453, 866, 1009, 1704, 1792, 1817, 1838
TatI	WGTACW	1 cut(s)	1306
TfiI	GAWTC	2 cut(s)	49, 1139
Tru1I	TTAA	7 cut(s)	273, 809, 834, 1424, 1671, 1736, 1773
Tru9I	TTAA	7 cut(s)	273, 809, 834, 1424, 1671, 1736, 1773
TscAI	CASTG	7 cut(s)	112, 516, 1087, 1149, 1303, 1538, 1686
TseFI	GTSAC	1 cut(s)	1234
TseI	GCWGC	4 cut(s)	226, 398, 437, 848
Tsp45I	GTSAC	1 cut(s)	1234
TspRI	CASTG	7 cut(s)	112, 516, 1087, 1149, 1303, 1538, 1686
Vha464I	CTTAAG	1 cut(s)	833
VpaK11BI	GGWCC	4 cut(s)	179, 350, 416, 557
VspI	ATTAAT	1 cut(s)	1773
XapI	RAATTY	4 cut(s)	289, 1180, 1502, 1527
XceI	RCATGY	5 cut(s)	286, 718, 848, 1334, 1343
XhoI	CTCGAG	1 cut(s)	407
XmiI	GTMKAC	2 cut(s)	453, 1265
XspI	CTAG	3 cut(s)	122, 791, 968
ZraI	GACGTC	1 cut(s)	603
ZrmI	AGTACT	1 cut(s)	1308
Zsp2I	ATGCAT	1 cut(s)	1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.