Rh2DG409500

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0015272
Physical Location & Seq
Forward (+)
59420604 .. 59423394
2791 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG409500.1

Sequence Viewer

Length: 1299 bp
ATGAAGAACAACCAAGAGTACTACTTGCAAGAATCTGTCACTTTCCCAGGGAAACCCTCCCCGTTCGCAGCAGAATGCTGGTTTGACGATGCTTGCATTCTCGACATGGACTACTTTGTCAAAACGCTAGCCGGAATTAAGGCCAAAGGCGTACGACCCGACCTCATCGGCTCAATTATCACCCACTACGCCTCCAAATGGCTTCCCGACCTCTTGGGTGATGTCTTCTCCGACCAAAAGAGCAGCCTGACGAACTTTGAGTCCTCCCCGGAAAGCGTTACAGCCTTGTGGATGAGAAAAAGGTTCTTCGTCGAAACCCTAGTCGGGGTTCTGCCTCCGGAGAAGGACTGCATCCCGTGCAACTTCCTCCTCCGGCTGCTAAGGACAGCCAACATGGTGGGGGTCGAGCCCTCTTATCGAGCAGAGCTGGAGAAGAGGATTTCGTGGCAGCTAGACCAAGCGTCACTAAAGGAACTCATGATTCCTTCTTTTAGTCACACGTGCGGGACATTATTGGACGTTGAACTTGTTATTAGGTTGGTGAAGAGGTTTGTGAACCTGGAGGATTCTGCTGCTAAAAGTGGAGCTGCCATGGTGAAGGTGGCGAAGCTCGTGGACTGTTACCTTGCTGAGGCAGCTGTGGATGTGAATCTGAGCTTGCCGGAGTTTGCGGCCCTCGCTGGAGCTCTGCCTAGCCATGCTCGAGCCACAGATGATGGGTTATACCGAGCCATTGATACTTATCTCAAAGCACATCCTGGAGTATCCAAGCATGATCGCAAGAGTCTGTGTAGACTAATTGACAGTCGAAAGCTCTCCCCTGAGGCATCTCTTCATGCTGCTCAAAACGAACGCTTGCCGGTCCGAGCTGTAATCCAAGTTCTCTTCTCCGAGCAAACCAAGCTCCACAGAAACATCGACTGGAGTGGCTCGTTCAGCGGCAGTGCACGGAGCCCAAACCCCTTTGCAGATCCAGGCGCCGCCAGATGCCACTCAAAGCGAGACATGTCGAATCTGCATACGCAGATAAGGAGCTTGAAAGATGAGGTTCTTAGGCTACAGAGCCAATGCAGCTCAATGCAAATGCAGATGGAGAGAAAATCAAGGGAGAAAAAGAAAGGGATTTTCAAGTGGAATGTTTTTGGAATACCTTCATTTAAGAGCGGGAGTGGTCTGGTGAGGATTAATGAGGGTGGAGAAGGGGAGGTTGGGTATGGGAAACAAACGCCAGCGATGGATATGAAGACCAAGTTGGTTAGAGGTAGAGTTACTCCGAAGTGGAGGAATTCTATGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NPH3

Protein Analysis

432

Amino Acids

48.25

Weight (kDa)

9.19

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 25 - 277 1.9e-83 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015272)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G52770 AT3G15570
fragaria_vesca FvH4_6g30650
malus_domestica MD17G1201600.v1.1
prunus_persica Prupe.3G077500_v2.0.a1
pyrus_communis pycom17g20550
rosa_chinensis RchiOBHm_Chr2g0137051
rosa_laevigata RLG00000019602
rosa_multiflora Rmu_sc0001374.1_g000031
rosa_roxburghii Rroxscaffold_2G00107740
rosa_rugosa Rorug02G0337600
rosa_samantha Rh2AG386500 Rh2BG393500 Rh2CG373800 Rh2DG409500
rosa_wichuraiana Rw2G031630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 116
AccB1I GGYRCC 1 cut(s) 977
AccBSI CCGCTC 1 cut(s) 1164
AccI GTMKAC 1 cut(s) 793
AccIII TCCGGA 1 cut(s) 337
AciI CCGC 5 cut(s) 504, 671, 939, 981, 1164
AclWI GGATC 1 cut(s) 965
AcsI RAATTY 1 cut(s) 1285
AcvI CACGTG 1 cut(s) 501
AcyI GRCGYC 1 cut(s) 978
AfaI GTAC 2 cut(s) 20, 153
AfiI CCNNNNNNNGG 4 cut(s) 198, 324, 325, 631
AflIII ACRYGT 2 cut(s) 498, 1005
AgsI TTSAA 3 cut(s) 524, 1039, 1129
AhdI GACNNNNNGTC 1 cut(s) 460
AjnI CCWGG 4 cut(s) 46, 558, 757, 973
AjuI GAANNNNNNNTTGG 4 cut(s) 1191, 1223, 1235, 1267
AloI GAACNNNNNNTCC 2 cut(s) 245, 277
Alw21I GWGCWC 2 cut(s) 688, 949
Alw26I GTCTC 1 cut(s) 996
Alw44I GTGCAC 1 cut(s) 945
AlwI GGATC 1 cut(s) 965
Ama87I CYCGRG 1 cut(s) 702
Aor13HI TCCGGA 1 cut(s) 337
AoxI GGCC 2 cut(s) 141, 672
ApaLI GTGCAC 1 cut(s) 945
ApeKI GCWGC 9 cut(s) 68, 243, 376, 448, 572, 587, 635, 839, 1071
ApoI RAATTY 1 cut(s) 1285
ArsI GACNNNNNNTTYG 4 cut(s) 245, 277, 306, 338
AseI ATTAAT 1 cut(s) 1185
Asp700I GAANNNNTTC 1 cut(s) 1150
AspLEI GCGC 1 cut(s) 980
AspS9I GGNCC 2 cut(s) 673, 862
AsuC2I CCSGG 1 cut(s) 269
AsuHPI GGTGA 5 cut(s) 172, 230, 553, 607, 1189
AsuNHI GCTAGC 1 cut(s) 127
AvaI CYCGRG 1 cut(s) 702
AvaII GGWCC 1 cut(s) 862
AxyI CCTNAGG 1 cut(s) 822
BaeGI GKGCMC 1 cut(s) 949
BanI GGYRCC 1 cut(s) 977
BanII GRGCYC 3 cut(s) 411, 688, 956
BauI CACGAG 1 cut(s) 611
BbrPI CACGTG 1 cut(s) 501
BbsI GAAGAC 2 cut(s) 217, 1250
Bbv12I GWGCWC 2 cut(s) 688, 949
BbvCI CCTCAGC 1 cut(s) 630
BbvI GCAGC 9 cut(s) 80, 255, 363, 460, 559, 574, 647, 826, 1083
BccI CCATC 3 cut(s) 710, 1084, 1228
BciT130I CCWGG 4 cut(s) 48, 560, 759, 975
BciVI GTATCC 1 cut(s) 775
BcnI CCSGG 1 cut(s) 269
BcoDI GTCTC 1 cut(s) 996
BfaI CTAG 4 cut(s) 128, 320, 452, 693
BfmI CTRYAG 1 cut(s) 1058
BfoI RGCGCY 1 cut(s) 981
BfuI GTATCC 1 cut(s) 775
BmcAI AGTACT 1 cut(s) 20
Bme1390I CCNGG 5 cut(s) 48, 269, 560, 759, 975
Bme18I GGWCC 1 cut(s) 862
BmeRI GACNNNNNGTC 1 cut(s) 460
BmeT110I CYCGRG 1 cut(s) 702
BmgT120I GGNCC 2 cut(s) 673, 862
BmiI GGNNCC 2 cut(s) 953, 979
BmrFI CCNGG 5 cut(s) 48, 269, 560, 759, 975
BmsI GCATC 4 cut(s) 79, 360, 836, 977
BmtI GCTAGC 1 cut(s) 131
BpiI GAAGAC 2 cut(s) 217, 1250
BpmI CTGGAG 5 cut(s) 449, 581, 702, 780, 943
Bpu10I CCTNAGC 2 cut(s) 380, 630
BpuMI CCSGG 1 cut(s) 269
BsaAI YACGTR 1 cut(s) 501
BsaBI GATNNNNATC 2 cut(s) 648, 741
BsaHI GRCGYC 1 cut(s) 978
BsaJI CCNNGG 4 cut(s) 46, 47, 267, 591
BsaWI WCCGGW 1 cut(s) 337
BsaXI ACNNNNNCTCC 4 cut(s) 176, 206, 1196, 1226
Bsc4I CCNNNNNNNGG 4 cut(s) 198, 324, 325, 631
Bse118I RCCGGY 1 cut(s) 859
Bse1I ACTGG 1 cut(s) 926
Bse21I CCTNAGG 1 cut(s) 822
Bse8I GATNNNNATC 2 cut(s) 648, 741
BseAI TCCGGA 1 cut(s) 337
BseBI CCWGG 4 cut(s) 48, 560, 759, 975
BseDI CCNNGG 4 cut(s) 46, 47, 267, 591
BseGI GGATG 4 cut(s) 297, 351, 649, 754
BseJI GATNNNNATC 2 cut(s) 648, 741
BseLI CCNNNNNNNGG 4 cut(s) 198, 324, 325, 631
BseMII CTCAG 3 cut(s) 621, 644, 813
BseNI ACTGG 1 cut(s) 926
BseRI GAGGAG 1 cut(s) 359
BseSI GKGCMC 1 cut(s) 949
BseXI GCAGC 9 cut(s) 80, 255, 363, 460, 559, 574, 647, 826, 1083
BshFI GGCC 2 cut(s) 143, 674
BshNI GGYRCC 1 cut(s) 977
BsiHKAI GWGCWC 2 cut(s) 688, 949
BsiHKCI CYCGRG 1 cut(s) 702
BsiSI CCGG 6 cut(s) 132, 269, 338, 373, 662, 860
BsiWI CGTACG 1 cut(s) 151
BslFI GGGAC 1 cut(s) 520
BslI CCNNNNNNNGG 4 cut(s) 198, 324, 325, 631
BsmAI GTCTC 1 cut(s) 996
BsmFI GGGAC 1 cut(s) 520
BsmI GAATGC 2 cut(s) 80, 96
BsnI GGCC 2 cut(s) 143, 674
BsoBI CYCGRG 1 cut(s) 702
Bsp1286I GDGCHC 4 cut(s) 411, 688, 949, 956
Bsp13I TCCGGA 1 cut(s) 337
Bsp143I GATC 2 cut(s) 775, 970
Bsp19I CCATGG 1 cut(s) 591
BspACI CCGC 5 cut(s) 504, 671, 939, 981, 1164
BspANI GGCC 2 cut(s) 143, 674
BspCNI CTCAG 3 cut(s) 622, 645, 814
BspEI TCCGGA 1 cut(s) 337
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 2 cut(s) 953, 979
BspOI GCTAGC 1 cut(s) 131
BspPI GGATC 1 cut(s) 965
BspT107I GGYRCC 1 cut(s) 977
BsrBI CCGCTC 1 cut(s) 1164
BsrFI RCCGGY 1 cut(s) 859
BsrI ACTGG 1 cut(s) 926
BssAI RCCGGY 1 cut(s) 859
BssECI CCNNGG 4 cut(s) 46, 47, 267, 591
BssMI GATC 2 cut(s) 775, 970
BssNI GRCGYC 1 cut(s) 978
BssSI CACGAG 1 cut(s) 611
BssT1I CCWWGG 1 cut(s) 591
Bst2BI CACGAG 1 cut(s) 611
Bst2UI CCWGG 4 cut(s) 48, 560, 759, 975
Bst4CI ACNGT 2 cut(s) 620, 806
Bst6I CTCTTC 4 cut(s) 428, 539, 837, 890
BstACI GRCGYC 1 cut(s) 978
BstAPI GCANNNNNTGC 1 cut(s) 357
BstBAI YACGTR 1 cut(s) 501
BstC8I GCNNGC 5 cut(s) 94, 129, 659, 857, 1230
BstDEI CTNAG 5 cut(s) 380, 630, 653, 822, 1052
BstDSI CCRYGG 1 cut(s) 591
BstENI CCTNNNNNAGG 1 cut(s) 629
BstF5I GGATG 4 cut(s) 297, 351, 649, 754
BstH2I RGCGCY 1 cut(s) 981
BstHHI GCGC 1 cut(s) 980
BstKTI GATC 2 cut(s) 778, 973
BstMAI GTCTC 1 cut(s) 996
BstMBI GATC 2 cut(s) 775, 970
BstMWI GCNNNNNNNGC 6 cut(s) 357, 635, 677, 901, 936, 1071
BstNI CCWGG 4 cut(s) 48, 560, 759, 975
BstNSI RCATGY 1 cut(s) 1009
BstSCI CCNGG 5 cut(s) 46, 267, 558, 757, 973
BstSFI CTRYAG 1 cut(s) 1058
BstSLI GKGCMC 1 cut(s) 949
BstV1I GCAGC 9 cut(s) 80, 255, 363, 460, 559, 574, 647, 826, 1083
BstV2I GAAGAC 2 cut(s) 217, 1250
BstX2I RGATCY 1 cut(s) 970
BstXI CCANNNNNNTGG 1 cut(s) 397
BstYI RGATCY 1 cut(s) 970
Bsu36I CCTNAGG 1 cut(s) 822
BsuI GTATCC 1 cut(s) 775
BsuRI GGCC 2 cut(s) 143, 674
BtgI CCRYGG 1 cut(s) 591
BtgZI GCGATG 1 cut(s) 1247
BtsCI GGATG 4 cut(s) 297, 351, 649, 754
BtsI GCAGTG 1 cut(s) 949
BtsIMutI CAGTG 1 cut(s) 949
Cac8I GCNNGC 5 cut(s) 94, 129, 659, 857, 1230
CciI TCATGA 1 cut(s) 477
CfoI GCGC 1 cut(s) 980
Cfr10I RCCGGY 1 cut(s) 859
Cfr13I GGNCC 2 cut(s) 673, 862
CpoI CGGWCCG 1 cut(s) 862
CseI GACGC 1 cut(s) 450
Csp6I GTAC 2 cut(s) 19, 152
CspI CGGWCCG 1 cut(s) 862
CviAII CATG 8 cut(s) 106, 394, 478, 592, 698, 773, 836, 1006
CviQI GTAC 2 cut(s) 19, 152
DdeI CTNAG 5 cut(s) 380, 630, 653, 822, 1052
DinI GGCGCC 1 cut(s) 979
DpnI GATC 2 cut(s) 777, 972
DpnII GATC 2 cut(s) 775, 970
DrdI GACNNNNNNGTC 1 cut(s) 116
DriI GACNNNNNGTC 1 cut(s) 460
DseDI GACNNNNNNGTC 1 cut(s) 116
Eam1104I CTCTTC 4 cut(s) 428, 539, 837, 890
Eam1105I GACNNNNNGTC 1 cut(s) 460
EarI CTCTTC 4 cut(s) 428, 539, 837, 890
Ecl136II GAGCTC 1 cut(s) 686
Eco130I CCWWGG 1 cut(s) 591
Eco24I GRGCYC 3 cut(s) 411, 688, 956
Eco47I GGWCC 1 cut(s) 862
Eco53kI GAGCTC 1 cut(s) 686
Eco72I CACGTG 1 cut(s) 501
Eco81I CCTNAGG 1 cut(s) 822
Eco88I CYCGRG 1 cut(s) 702
EcoICRI GAGCTC 1 cut(s) 686
EcoNI CCTNNNNNAGG 1 cut(s) 629
EcoRI GAATTC 1 cut(s) 1285
EcoRII CCWGG 4 cut(s) 46, 558, 757, 973
EcoT14I CCWWGG 1 cut(s) 591
EcoT38I GRGCYC 3 cut(s) 411, 688, 956
EgeI GGCGCC 1 cut(s) 979
EheI GGCGCC 1 cut(s) 979
ErhI CCWWGG 1 cut(s) 591
FaeI CATG 8 cut(s) 109, 397, 481, 595, 701, 776, 839, 1009
FaqI GGGAC 1 cut(s) 520
FatI CATG 8 cut(s) 105, 393, 477, 591, 697, 772, 835, 1005
FauI CCCGC 2 cut(s) 497, 1157
FblI GTMKAC 1 cut(s) 793
FokI GGATG 4 cut(s) 304, 338, 656, 741
FriOI GRGCYC 3 cut(s) 411, 688, 956
FspBI CTAG 4 cut(s) 128, 320, 452, 693
GlaI GCGC 1 cut(s) 979
GsuI CTGGAG 5 cut(s) 449, 581, 702, 780, 943
HaeII RGCGCY 1 cut(s) 981
HaeIII GGCC 2 cut(s) 143, 674
HapII CCGG 6 cut(s) 132, 269, 338, 373, 662, 860
HgaI GACGC 1 cut(s) 450
HhaI GCGC 1 cut(s) 980
Hin1I GRCGYC 1 cut(s) 978
Hin1II CATG 8 cut(s) 109, 397, 481, 595, 701, 776, 839, 1009
Hin6I GCGC 1 cut(s) 978
HinP1I GCGC 1 cut(s) 978
HinfI GANTC 7 cut(s) 32, 260, 481, 566, 649, 784, 1012
HpaII CCGG 6 cut(s) 132, 269, 338, 373, 662, 860
HphI GGTGA 5 cut(s) 172, 230, 553, 607, 1189
Hpy166II GTNNAC 4 cut(s) 556, 616, 794, 947
Hpy188I TCNGA 5 cut(s) 232, 654, 866, 892, 1275
Hpy188III TCNNGA 4 cut(s) 101, 206, 338, 478
Hpy8I GTNNAC 4 cut(s) 556, 616, 794, 947
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 5 cut(s) 337, 495, 592, 1161, 1193
HpyCH4III ACNGT 2 cut(s) 620, 806
HpyCH4IV ACGT 2 cut(s) 500, 519
HpyF10VI GCNNNNNNNGC 6 cut(s) 357, 635, 677, 901, 936, 1071
HpyF3I CTNAG 5 cut(s) 380, 630, 653, 822, 1052
HpySE526I ACGT 2 cut(s) 500, 519
Hsp92I GRCGYC 1 cut(s) 978
Hsp92II CATG 8 cut(s) 109, 397, 481, 595, 701, 776, 839, 1009
HspAI GCGC 1 cut(s) 978
KasI GGCGCC 1 cut(s) 977
Kpn2I TCCGGA 1 cut(s) 337
Kzo9I GATC 2 cut(s) 775, 970
LmnI GCTCC 5 cut(s) 584, 683, 909, 951, 1032
Lsp1109I GCAGC 9 cut(s) 80, 255, 363, 460, 559, 574, 647, 826, 1083
LweI GCATC 4 cut(s) 79, 360, 836, 977
MaeI CTAG 4 cut(s) 128, 320, 452, 693
MaeII ACGT 2 cut(s) 500, 519
MaeIII GTNAC 6 cut(s) 37, 277, 462, 494, 620, 1267
MalI GATC 2 cut(s) 777, 972
MbiI CCGCTC 1 cut(s) 1164
MboI GATC 2 cut(s) 775, 970
MboII GAAGA 8 cut(s) 16, 217, 298, 445, 556, 824, 877, 1255
MflI RGATCY 1 cut(s) 970
MhlI GDGCHC 4 cut(s) 411, 688, 949, 956
MluCI AATT 4 cut(s) 135, 174, 798, 1285
Mly113I GGCGCC 1 cut(s) 978
MlyI GAGTC 2 cut(s) 269, 793
MmeI TCCRAC 1 cut(s) 255
MroI TCCGGA 1 cut(s) 337
MroXI GAANNNNTTC 1 cut(s) 1150
MseI TTAA 4 cut(s) 138, 1158, 1185, 1297
MspA1I CMGCKG 2 cut(s) 638, 939
MspI CCGG 6 cut(s) 132, 269, 338, 373, 662, 860
MspR9I CCNGG 5 cut(s) 48, 269, 560, 759, 975
Mva1269I GAATGC 2 cut(s) 80, 96
MvaI CCWGG 4 cut(s) 48, 560, 759, 975
MwoI GCNNNNNNNGC 6 cut(s) 357, 635, 677, 901, 936, 1071
NarI GGCGCC 1 cut(s) 978
NciI CCSGG 1 cut(s) 269
NcoI CCATGG 1 cut(s) 591
NdeII GATC 2 cut(s) 775, 970
NheI GCTAGC 1 cut(s) 127
NlaIII CATG 8 cut(s) 109, 397, 481, 595, 701, 776, 839, 1009
NlaIV GGNNCC 2 cut(s) 953, 979
NmuCI GTSAC 3 cut(s) 37, 462, 494
NspI RCATGY 1 cut(s) 1009
PaeR7I CTCGAG 1 cut(s) 702
PagI TCATGA 1 cut(s) 477
PasI CCCWGGG 1 cut(s) 47
PciI ACATGT 1 cut(s) 1005
PctI GAATGC 2 cut(s) 80, 96
PdmI GAANNNNTTC 1 cut(s) 1150
PfeI GAWTC 5 cut(s) 32, 481, 566, 649, 1012
Pfl23II CGTACG 1 cut(s) 151
PfoI TCCNGGA 1 cut(s) 757
PleI GAGTC 2 cut(s) 268, 792
PluTI GGCGCC 1 cut(s) 981
PmaCI CACGTG 1 cut(s) 501
PmlI CACGTG 1 cut(s) 501
PpsI GAGTC 2 cut(s) 268, 792
Ppu21I YACGTR 1 cut(s) 501
PscI ACATGT 1 cut(s) 1005
PshBI ATTAAT 1 cut(s) 1185
Psp124BI GAGCTC 1 cut(s) 688
Psp6I CCWGG 4 cut(s) 46, 558, 757, 973
PspCI CACGTG 1 cut(s) 501
PspGI CCWGG 4 cut(s) 46, 558, 757, 973
PspLI CGTACG 1 cut(s) 151
PspN4I GGNNCC 2 cut(s) 953, 979
PspPI GGNCC 2 cut(s) 673, 862
PspXI VCTCGAGB 1 cut(s) 702
PsrI GAACNNNNNNTAC 2 cut(s) 864, 896
PsuI RGATCY 1 cut(s) 970
PvuII CAGCTG 1 cut(s) 638
RsaI GTAC 2 cut(s) 20, 153
RsaNI GTAC 2 cut(s) 19, 152
Rsr2I CGGWCCG 1 cut(s) 862
RsrII CGGWCCG 1 cut(s) 862
SacI GAGCTC 1 cut(s) 688
SaqAI TTAA 4 cut(s) 138, 1158, 1185, 1297
Sau3AI GATC 2 cut(s) 775, 970
Sau96I GGNCC 2 cut(s) 673, 862
ScaI AGTACT 1 cut(s) 20
SchI GAGTC 2 cut(s) 269, 793
ScrFI CCNGG 5 cut(s) 48, 269, 560, 759, 975
SduI GDGCHC 4 cut(s) 411, 688, 949, 956
SfaNI GCATC 4 cut(s) 79, 360, 836, 977
SfcI CTRYAG 1 cut(s) 1058
SfoI GGCGCC 1 cut(s) 979
Sfr274I CTCGAG 1 cut(s) 702
SinI GGWCC 1 cut(s) 862
SlaI CTCGAG 1 cut(s) 702
SmlI CTYRAG 1 cut(s) 702
SmoI CTYRAG 1 cut(s) 702
Sse9I AATT 4 cut(s) 135, 174, 798, 1285
SsiI CCGC 5 cut(s) 504, 671, 939, 981, 1164
SspDI GGCGCC 1 cut(s) 977
SspMI CTAG 4 cut(s) 128, 320, 452, 693
SstI GAGCTC 1 cut(s) 688
StyD4I CCNGG 5 cut(s) 46, 267, 558, 757, 973
StyI CCWWGG 1 cut(s) 591
TaaI ACNGT 2 cut(s) 620, 806
TaiI ACGT 2 cut(s) 503, 522
TaqI TCGA 8 cut(s) 102, 312, 405, 418, 703, 808, 918, 1010
TasI AATT 4 cut(s) 135, 174, 798, 1285
TatI WGTACW 1 cut(s) 18
TauI GCSGC 3 cut(s) 674, 942, 983
TfiI GAWTC 5 cut(s) 32, 481, 566, 649, 1012
Tru1I TTAA 4 cut(s) 138, 1158, 1185, 1297
Tru9I TTAA 4 cut(s) 138, 1158, 1185, 1297
TscAI CASTG 1 cut(s) 949
TseFI GTSAC 3 cut(s) 37, 462, 494
TseI GCWGC 9 cut(s) 68, 243, 376, 448, 572, 587, 635, 839, 1071
Tsp45I GTSAC 3 cut(s) 37, 462, 494
TspDTI ATGAA 4 cut(s) 17, 824, 1143, 1256
TspGWI ACGGA 1 cut(s) 964
TspRI CASTG 1 cut(s) 949
VneI GTGCAC 1 cut(s) 945
VpaK11BI GGWCC 1 cut(s) 862
VspI ATTAAT 1 cut(s) 1185
XagI CCTNNNNNAGG 1 cut(s) 629
XapI RAATTY 1 cut(s) 1285
XceI RCATGY 1 cut(s) 1009
XcmI CCANNNNNNNNNTGG 1 cut(s) 598
XhoI CTCGAG 1 cut(s) 702
XmiI GTMKAC 1 cut(s) 793
XmnI GAANNNNTTC 1 cut(s) 1150
XspI CTAG 4 cut(s) 128, 320, 452, 693
ZrmI AGTACT 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.