No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g24123 |
| prunus_persica | Prupe.6G327900_v2.0.a1 |
| pyrus_communis | pycom04g18320 |
| rosa_laevigata | RLG00000023301 |
| rosa_multiflora | Rmu_sc0002280.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00398630 |
| rosa_rugosa | Rorug03G0204800 |
| rosa_samantha | Rh3AG252900 Rh3BG289500 Rh3CG286900 Rh3DG282400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 181 |
| AclWI | GGATC | 1 cut(s) | 105 |
| AcoI | YGGCCR | 2 cut(s) | 71, 424 |
| AcuI | CTGAAG | 1 cut(s) | 368 |
| AfaI | GTAC | 1 cut(s) | 64 |
| AgsI | TTSAA | 3 cut(s) | 212, 287, 325 |
| AjnI | CCWGG | 1 cut(s) | 68 |
| AluBI | AGCT | 3 cut(s) | 59, 259, 420 |
| AluI | AGCT | 3 cut(s) | 59, 259, 420 |
| AlwI | GGATC | 1 cut(s) | 105 |
| AoxI | GGCC | 2 cut(s) | 71, 424 |
| ApeKI | GCWGC | 1 cut(s) | 18 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 257, 289 |
| AsuHPI | GGTGA | 1 cut(s) | 120 |
| AsuNHI | GCTAGC | 1 cut(s) | 176 |
| BalI | TGGCCA | 2 cut(s) | 73, 426 |
| BbvI | GCAGC | 1 cut(s) | 30 |
| BccI | CCATC | 2 cut(s) | 386, 438 |
| BciT130I | CCWGG | 1 cut(s) | 70 |
| BfaI | CTAG | 3 cut(s) | 60, 177, 191 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| BisI | GCNGC | 2 cut(s) | 19, 181 |
| BlsI | GCNGC | 2 cut(s) | 20, 182 |
| BmcAI | AGTACT | 1 cut(s) | 64 |
| Bme1390I | CCNGG | 1 cut(s) | 70 |
| BmrFI | CCNGG | 1 cut(s) | 70 |
| BmsI | GCATC | 1 cut(s) | 93 |
| BmtI | GCTAGC | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 2 cut(s) | 104, 460 |
| Bse1I | ACTGG | 2 cut(s) | 74, 458 |
| BseBI | CCWGG | 1 cut(s) | 70 |
| BseNI | ACTGG | 2 cut(s) | 74, 458 |
| BseXI | GCAGC | 1 cut(s) | 30 |
| BshFI | GGCC | 2 cut(s) | 73, 426 |
| BsnI | GGCC | 2 cut(s) | 73, 426 |
| Bsp143I | GATC | 3 cut(s) | 81, 97, 343 |
| BspACI | CCGC | 1 cut(s) | 181 |
| BspANI | GGCC | 2 cut(s) | 73, 426 |
| BspOI | GCTAGC | 1 cut(s) | 180 |
| BspPI | GGATC | 1 cut(s) | 105 |
| BsrI | ACTGG | 2 cut(s) | 74, 458 |
| BssMI | GATC | 3 cut(s) | 81, 97, 343 |
| Bst2UI | CCWGG | 1 cut(s) | 70 |
| Bst6I | CTCTTC | 1 cut(s) | 357 |
| BstC8I | GCNNGC | 2 cut(s) | 178, 261 |
| BstDEI | CTNAG | 1 cut(s) | 416 |
| BstKTI | GATC | 3 cut(s) | 84, 100, 346 |
| BstMBI | GATC | 3 cut(s) | 81, 97, 343 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 27, 56, 497 |
| BstNI | CCWGG | 1 cut(s) | 70 |
| BstSCI | CCNGG | 1 cut(s) | 68 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 1 cut(s) | 30 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 434 |
| BsuRI | GGCC | 2 cut(s) | 73, 426 |
| BtsI | GCAGTG | 1 cut(s) | 52 |
| BtsIMutI | CAGTG | 1 cut(s) | 52 |
| Cac8I | GCNNGC | 2 cut(s) | 178, 261 |
| Csp6I | GTAC | 1 cut(s) | 63 |
| CviAII | CATG | 1 cut(s) | 198 |
| CviQI | GTAC | 1 cut(s) | 63 |
| DdeI | CTNAG | 1 cut(s) | 416 |
| DpnI | GATC | 3 cut(s) | 83, 99, 345 |
| DpnII | GATC | 3 cut(s) | 81, 97, 343 |
| EaeI | YGGCCR | 2 cut(s) | 71, 424 |
| Eam1104I | CTCTTC | 1 cut(s) | 357 |
| EarI | CTCTTC | 1 cut(s) | 357 |
| Eco57I | CTGAAG | 1 cut(s) | 368 |
| EcoRII | CCWGG | 1 cut(s) | 68 |
| FaeI | CATG | 1 cut(s) | 201 |
| FaiI | YATR | 5 cut(s) | 158, 199, 225, 423, 509 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 260, 292 |
| FatI | CATG | 1 cut(s) | 197 |
| Fnu4HI | GCNGC | 2 cut(s) | 19, 181 |
| Fsp4HI | GCNGC | 2 cut(s) | 19, 181 |
| FspBI | CTAG | 3 cut(s) | 60, 177, 191 |
| GluI | GCNGC | 2 cut(s) | 19, 181 |
| HaeIII | GGCC | 2 cut(s) | 73, 426 |
| Hin1II | CATG | 1 cut(s) | 201 |
| HinfI | GANTC | 4 cut(s) | 87, 194, 202, 412 |
| HphI | GGTGA | 1 cut(s) | 120 |
| Hpy188I | TCNGA | 5 cut(s) | 86, 102, 343, 348, 451 |
| Hpy188III | TCNNGA | 1 cut(s) | 121 |
| HpyAV | CCTTC | 2 cut(s) | 319, 346 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 27, 56, 497 |
| HpyF3I | CTNAG | 1 cut(s) | 416 |
| Hsp92II | CATG | 1 cut(s) | 201 |
| Kzo9I | GATC | 3 cut(s) | 81, 97, 343 |
| LpnPI | CCDG | 6 cut(s) | 55, 82, 87, 219, 245, 439 |
| Lsp1109I | GCAGC | 1 cut(s) | 30 |
| LweI | GCATC | 1 cut(s) | 93 |
| MaeI | CTAG | 3 cut(s) | 60, 177, 191 |
| MalI | GATC | 3 cut(s) | 83, 99, 345 |
| MboI | GATC | 3 cut(s) | 81, 97, 343 |
| MboII | GAAGA | 6 cut(s) | 20, 280, 322, 361, 374, 415 |
| MlsI | TGGCCA | 2 cut(s) | 73, 426 |
| MluCI | AATT | 2 cut(s) | 140, 396 |
| MluNI | TGGCCA | 2 cut(s) | 73, 426 |
| MlyI | GAGTC | 1 cut(s) | 81 |
| MmeI | TCCRAC | 2 cut(s) | 89, 415 |
| MnlI | CCTC | 5 cut(s) | 128, 142, 166, 351, 453 |
| Mox20I | TGGCCA | 2 cut(s) | 73, 426 |
| MscI | TGGCCA | 2 cut(s) | 73, 426 |
| Msp20I | TGGCCA | 2 cut(s) | 73, 426 |
| MspR9I | CCNGG | 1 cut(s) | 70 |
| MvaI | CCWGG | 1 cut(s) | 70 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 27, 56, 497 |
| NdeII | GATC | 3 cut(s) | 81, 97, 343 |
| NheI | GCTAGC | 1 cut(s) | 176 |
| NlaIII | CATG | 1 cut(s) | 201 |
| PfeI | GAWTC | 3 cut(s) | 194, 202, 412 |
| PkrI | GCNGC | 2 cut(s) | 20, 182 |
| PleI | GAGTC | 1 cut(s) | 81 |
| PpsI | GAGTC | 1 cut(s) | 81 |
| Psp6I | CCWGG | 1 cut(s) | 68 |
| PspGI | CCWGG | 1 cut(s) | 68 |
| RsaI | GTAC | 1 cut(s) | 64 |
| RsaNI | GTAC | 1 cut(s) | 63 |
| SatI | GCNGC | 2 cut(s) | 19, 181 |
| Sau3AI | GATC | 3 cut(s) | 81, 97, 343 |
| ScaI | AGTACT | 1 cut(s) | 64 |
| SchI | GAGTC | 1 cut(s) | 81 |
| ScrFI | CCNGG | 1 cut(s) | 70 |
| SetI | ASST | 7 cut(s) | 61, 163, 255, 261, 337, 422, 464 |
| SfaNI | GCATC | 1 cut(s) | 93 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| SmlI | CTYRAG | 2 cut(s) | 119, 439 |
| SmoI | CTYRAG | 2 cut(s) | 119, 439 |
| Sse9I | AATT | 2 cut(s) | 140, 396 |
| SsiI | CCGC | 1 cut(s) | 181 |
| SspMI | CTAG | 3 cut(s) | 60, 177, 191 |
| StyD4I | CCNGG | 1 cut(s) | 68 |
| TaqI | TCGA | 1 cut(s) | 381 |
| TasI | AATT | 2 cut(s) | 140, 396 |
| TatI | WGTACW | 1 cut(s) | 62 |
| TauI | GCSGC | 1 cut(s) | 183 |
| TfiI | GAWTC | 3 cut(s) | 194, 202, 412 |
| TscAI | CASTG | 1 cut(s) | 52 |
| TseI | GCWGC | 1 cut(s) | 18 |
| TspDTI | ATGAA | 2 cut(s) | 186, 208 |
| TspGWI | ACGGA | 1 cut(s) | 110 |
| TspRI | CASTG | 1 cut(s) | 52 |
| XspI | CTAG | 3 cut(s) | 60, 177, 191 |
| ZrmI | AGTACT | 1 cut(s) | 64 |