Rh3BG020100

Ankyrin repeat domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
1268622 .. 1272725
4104 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG020100.1

Sequence Viewer

Length: 1707 bp
ATGGAAGATTTTTCCAAATATTCCCATAGTCCAGCTCATTTGGCGGTTGCACGCCGTGACTATACTGCCCTTAAGCGCATTATCTCTACCCTCCCCCGGCTTGCCAAGGCTAGTGAAGTAAGCTCTGAAGCTGAGTCTCTTGAGGCTGAGCTCCGAGCTGATTCTGTCTCAGCTGTCATTGATCGTCGTGATGTTCCTGGTCGTGAGACCCCTCTGCATCTTGCAGTGCGTCTCCGGGATCCAAACTCAGCAGAGATTTTGATGGCTGCTGGTGCTGATTGGAGTCTTCAAAATGAGAATGGTTGGAGTGCTCTCCAAGAAGCAGTGTGCACTAGAGAGGAAGCCATTGCTATGATTATTGCACGGCACTACCAACCGCTTGCCTGGGCCAAATGGTGCCGTAGACTTCCCCGTATTGTTGCCTCTGCAAACCGTATTCGTGATTTTTACATGGAGATAACTTTTCATTTTGAGAGCTCAGTCATCCCGTTTATTGGTCGAATAGCCCCCTCAGATACTTACCGCATTTGGAAGCGTGGCTCTAATCTCCGTGCTGATATGACTCTTGCTGGTTTTGATGGGTTTCGCATTCAAAGGTCTGATCAAACATTTCTTTTTCTTGGAGAGGGCTATTCTTCAGAGGATGGTAATGTGAATTTGTCCCCTGGTTCTTTGATTGTTCTAGCACATAAGGAAAAAGAAATCACAAATGCTTTGGAAGGAGCTGGTGCCCAACCAACTGAAGCTGAAGTTGCCCATGAAGTGGCCTTGATGTCTCAAACGAATATGTATAGGCCAGGCATTGATGTTACTCAGGCTGAGCTTGTTCCCCATTTAACCTGGAGGCGACAGGAGAGGACAGAGATGGTTGGAAATTGGAAGGCCAAAGTTTTTGATATGCTTCACGTGATGGTGAGTGTAAAGTCTAGGCGGGTTCCTGGGGCTATGACAGATGAGGAGCTATTTGCAGTGGACGATGAAGAAAGGGTGGCAAATGGTGGTGACAATGATGAATATGATGATGTATTAACCGCTGAGGAGAAGATTCAGTTGGATTCTGCACTTCGTATGGGACACTCTGATGGTGTTTGTGAGGACGAGGATAGTGGGGTAACTGAGAGCCATGAAAATAGTGCAGGCACCTTTGAGAATGGTGAATTCAACGGTGTTAGTAAGGACAAGAAGAGTTGGTTTGGTTGGAACAAGAAAAGTTCAAAGGGAAATGATGATTCTGAAGATCCAAAGCTTTTGAAGAAGTTCTCAAAGTTGGCTCCAGAAGGTGGCAACCAGAAACCACATGATCATCAAAAACCATCATCCGAAGTTCCTAGAGATGATATGACAGATGCCAAGAAGGGAAAAGACAAAAGCAGTAAGAAGAAAAAGAAGAAAGGATCTAATGAACCTAAGCATGAGAGTGAGTATAAAAAAGGTTTGAGACCCGTCTTATGGTTGACGCCAGATTTCCCTCTGAAAACAGATGAGCTTCTTCCCTTACTAGACATCTTAGCAAACAAGGTCAAGGCTATAAGGAGACTCAGGGAGCTTTTGACTACTAAACTGCCCCATGGCACTTTTCCTGTCAAGGTAATCCAAAAGCTCCAGCTTAATAGATTTTTTTTTTTTCAGTTTTTTGTTCTGCTTGGTTGTTTAAGCAATAGCTTTAGCTACTCTTTCCAGATTCAGTATAGCTCACCTGTATATTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

568

Amino Acids

64.07

Weight (kDa)

6.35

Isoelectric Point (pI)

44.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANKRD13_C PF11904 184 - 530 9.6e-100 ANKRD13 C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010012)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 396, 728, 1139
AccB7I CCANNNNNTGG 2 cut(s) 763, 1280
AccI GTMKAC 1 cut(s) 403
AciI CCGC 5 cut(s) 44, 377, 523, 931, 1032
AclWI GGATC 4 cut(s) 233, 246, 1232, 1402
AcsI RAATTY 2 cut(s) 655, 1157
AcuI CTGAAG 5 cut(s) 147, 621, 762, 768, 1254
AcvI CACGTG 1 cut(s) 907
AcyI GRCGYC 1 cut(s) 1457
AdeI CACNNNGTG 1 cut(s) 56
AfiI CCNNNNNNNGG 5 cut(s) 96, 494, 763, 1280, 1449
AflII CTTAAG 1 cut(s) 71
AgsI TTSAA 5 cut(s) 290, 593, 1162, 1215, 1252
AjnI CCWGG 6 cut(s) 196, 383, 664, 796, 839, 937
AjuI GAANNNNNNNTTGG 2 cut(s) 1034, 1066
Alw21I GWGCWC 4 cut(s) 153, 313, 332, 479
Alw26I GTCTC 7 cut(s) 141, 172, 200, 236, 780, 1432, 1528
Alw44I GTGCAC 1 cut(s) 328
AlwI GGATC 4 cut(s) 233, 246, 1232, 1402
AoxI GGCC 4 cut(s) 387, 765, 794, 882
ApaLI GTGCAC 1 cut(s) 328
ApeKI GCWGC 1 cut(s) 266
ApoI RAATTY 2 cut(s) 655, 1157
Asp700I GAANNNNTTC 1 cut(s) 1256
AspLEI GCGC 1 cut(s) 78
AspS9I GGNCC 1 cut(s) 387
AsuC2I CCSGG 2 cut(s) 97, 236
AsuHPI GGTGA 4 cut(s) 925, 1013, 1166, 1686
BaeGI GKGCMC 2 cut(s) 332, 733
BamHI GGATCC 1 cut(s) 238
BanI GGYRCC 3 cut(s) 396, 728, 1139
BanII GRGCYC 2 cut(s) 153, 479
BbrPI CACGTG 1 cut(s) 907
BbsI GAAGAC 1 cut(s) 278
Bbv12I GWGCWC 4 cut(s) 153, 313, 332, 479
BbvCI CCTCAGC 1 cut(s) 1035
BbvI GCAGC 1 cut(s) 253
BccI CCATC 7 cut(s) 256, 572, 638, 859, 904, 1076, 1321
BceAI ACGGC 3 cut(s) 39, 380, 384
BciT130I CCWGG 6 cut(s) 198, 385, 666, 798, 841, 939
BclI TGATCA 2 cut(s) 601, 1300
BcnI CCSGG 2 cut(s) 97, 236
BcoDI GTCTC 7 cut(s) 141, 172, 200, 236, 780, 1432, 1528
BfaI CTAG 6 cut(s) 111, 333, 683, 927, 1329, 1499
BfrI CTTAAG 1 cut(s) 71
BisI GCNGC 1 cut(s) 267
BlpI GCTNAGC 2 cut(s) 147, 819
BlsI GCNGC 1 cut(s) 268
Bme1390I CCNGG 8 cut(s) 97, 198, 236, 385, 666, 798, 841, 939
BmgT120I GGNCC 1 cut(s) 387
BmiI GGNNCC 6 cut(s) 240, 398, 730, 936, 1141, 1272
BmrFI CCNGG 8 cut(s) 97, 198, 236, 385, 666, 798, 841, 939
BmsI GCATC 2 cut(s) 226, 1336
BpiI GAAGAC 1 cut(s) 278
BpmI CTGGAG 3 cut(s) 862, 1257, 1586
Bpu10I CCTNAGC 2 cut(s) 1035, 1407
Bpu1102I GCTNAGC 2 cut(s) 147, 819
BpuEI CTTGAG 1 cut(s) 161
BpuMI CCSGG 2 cut(s) 97, 236
BsaAI YACGTR 1 cut(s) 907
BsaHI GRCGYC 1 cut(s) 1457
BsaI GGTCTC 2 cut(s) 200, 1432
BsaJI CCNNGG 6 cut(s) 95, 105, 384, 664, 938, 1567
Bsc4I CCNNNNNNNGG 5 cut(s) 96, 494, 763, 1280, 1449
Bse3DI GCAATG 1 cut(s) 345
BseBI CCWGG 6 cut(s) 198, 385, 666, 798, 841, 939
BseDI CCNNGG 6 cut(s) 95, 105, 384, 664, 938, 1567
BseGI GGATG 3 cut(s) 483, 649, 1316
BseLI CCNNNNNNNGG 5 cut(s) 96, 494, 763, 1280, 1449
BseMI GCAATG 1 cut(s) 345
BseRI GAGGAG 2 cut(s) 971, 1052
BseSI GKGCMC 2 cut(s) 332, 733
BseXI GCAGC 1 cut(s) 253
BsgI GTGCAG 2 cut(s) 1044, 1155
BshFI GGCC 4 cut(s) 389, 767, 796, 884
BshNI GGYRCC 3 cut(s) 396, 728, 1139
BsiHKAI GWGCWC 4 cut(s) 153, 313, 332, 479
BsiSI CCGG 2 cut(s) 97, 235
BslFI GGGAC 2 cut(s) 646, 1086
BslI CCNNNNNNNGG 5 cut(s) 96, 494, 763, 1280, 1449
BsmAI GTCTC 7 cut(s) 141, 172, 200, 236, 780, 1432, 1528
BsmBI CGTCTC 1 cut(s) 236
BsmFI GGGAC 2 cut(s) 646, 1086
BsmI GAATGC 1 cut(s) 588
BsnI GGCC 4 cut(s) 389, 767, 796, 884
Bso31I GGTCTC 2 cut(s) 200, 1432
Bsp1286I GDGCHC 5 cut(s) 153, 313, 332, 479, 733
Bsp143I GATC 6 cut(s) 181, 238, 601, 1237, 1300, 1394
Bsp1720I GCTNAGC 2 cut(s) 147, 819
Bsp19I CCATGG 1 cut(s) 1567
BspACI CCGC 5 cut(s) 44, 377, 523, 931, 1032
BspANI GGCC 4 cut(s) 389, 767, 796, 884
BspLI GGNNCC 6 cut(s) 240, 398, 730, 936, 1141, 1272
BspPI GGATC 4 cut(s) 233, 246, 1232, 1402
BspT107I GGYRCC 3 cut(s) 396, 728, 1139
BspTI CTTAAG 1 cut(s) 71
BspTNI GGTCTC 2 cut(s) 200, 1432
BsrDI GCAATG 1 cut(s) 345
BssECI CCNNGG 6 cut(s) 95, 105, 384, 664, 938, 1567
BssMI GATC 6 cut(s) 181, 238, 601, 1237, 1300, 1394
BssNI GRCGYC 1 cut(s) 1457
BssT1I CCWWGG 2 cut(s) 105, 1567
Bst2UI CCWGG 6 cut(s) 198, 385, 666, 798, 841, 939
Bst4CI ACNGT 2 cut(s) 434, 1166
Bst6I CTCTTC 1 cut(s) 1178
BstACI GRCGYC 1 cut(s) 1457
BstAFI CTTAAG 1 cut(s) 71
BstBAI YACGTR 1 cut(s) 907
BstC8I GCNNGC 4 cut(s) 52, 102, 381, 1138
BstDSI CCRYGG 1 cut(s) 1567
BstF5I GGATG 3 cut(s) 483, 649, 1316
BstHHI GCGC 1 cut(s) 78
BstKTI GATC 6 cut(s) 184, 241, 604, 1240, 1303, 1397
BstMAI GTCTC 7 cut(s) 141, 172, 200, 236, 780, 1432, 1528
BstMBI GATC 6 cut(s) 181, 238, 601, 1237, 1300, 1394
BstMWI GCNNNNNNNGC 3 cut(s) 41, 272, 752
BstNI CCWGG 6 cut(s) 198, 385, 666, 798, 841, 939
BstSCI CCNGG 8 cut(s) 95, 196, 234, 383, 664, 796, 839, 937
BstSLI GKGCMC 2 cut(s) 332, 733
BstV1I GCAGC 1 cut(s) 253
BstV2I GAAGAC 1 cut(s) 278
BstX2I RGATCY 3 cut(s) 238, 1237, 1394
BstYI RGATCY 3 cut(s) 238, 1237, 1394
BsuRI GGCC 4 cut(s) 389, 767, 796, 884
BtgI CCRYGG 1 cut(s) 1567
BtsCI GGATG 3 cut(s) 483, 649, 1316
BtsI GCAGTG 3 cut(s) 231, 330, 975
BtsIMutI CAGTG 3 cut(s) 231, 330, 975
Cac8I GCNNGC 4 cut(s) 52, 102, 381, 1138
CfoI GCGC 1 cut(s) 78
Cfr13I GGNCC 1 cut(s) 387
CseI GACGC 2 cut(s) 218, 1465
CviAII CATG 6 cut(s) 451, 758, 1124, 1298, 1412, 1568
DpnI GATC 6 cut(s) 183, 240, 603, 1239, 1302, 1396
DpnII GATC 6 cut(s) 181, 238, 601, 1237, 1300, 1394
DraIII CACNNNGTG 1 cut(s) 56
Eam1104I CTCTTC 1 cut(s) 1178
EarI CTCTTC 1 cut(s) 1178
Ecl136II GAGCTC 2 cut(s) 151, 477
Eco130I CCWWGG 2 cut(s) 105, 1567
Eco24I GRGCYC 2 cut(s) 153, 479
Eco31I GGTCTC 2 cut(s) 200, 1432
Eco53kI GAGCTC 2 cut(s) 151, 477
Eco57I CTGAAG 5 cut(s) 147, 621, 762, 768, 1254
Eco72I CACGTG 1 cut(s) 907
EcoICRI GAGCTC 2 cut(s) 151, 477
EcoRI GAATTC 1 cut(s) 1157
EcoRII CCWGG 6 cut(s) 196, 383, 664, 796, 839, 937
EcoT14I CCWWGG 2 cut(s) 105, 1567
EcoT38I GRGCYC 2 cut(s) 153, 479
ErhI CCWWGG 2 cut(s) 105, 1567
Esp3I CGTCTC 1 cut(s) 236
FaeI CATG 6 cut(s) 454, 761, 1127, 1301, 1415, 1571
FaqI GGGAC 2 cut(s) 646, 1086
FatI CATG 6 cut(s) 450, 757, 1123, 1297, 1411, 1567
FauI CCCGC 1 cut(s) 924
FbaI TGATCA 2 cut(s) 601, 1300
FblI GTMKAC 1 cut(s) 403
Fnu4HI GCNGC 1 cut(s) 267
FokI GGATG 3 cut(s) 470, 656, 1303
FriOI GRGCYC 2 cut(s) 153, 479
Fsp4HI GCNGC 1 cut(s) 267
FspBI CTAG 6 cut(s) 111, 333, 683, 927, 1329, 1499
GlaI GCGC 1 cut(s) 77
GluI GCNGC 1 cut(s) 267
GsuI CTGGAG 3 cut(s) 862, 1257, 1586
HaeIII GGCC 4 cut(s) 389, 767, 796, 884
HapII CCGG 2 cut(s) 97, 235
HgaI GACGC 2 cut(s) 218, 1465
HhaI GCGC 1 cut(s) 78
Hin1I GRCGYC 1 cut(s) 1457
Hin1II CATG 6 cut(s) 454, 761, 1127, 1301, 1415, 1571
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
HincII GTYRAC 1 cut(s) 1455
HindII GTYRAC 1 cut(s) 1455
HindIII AAGCTT 1 cut(s) 1244
HinfI GANTC 9 cut(s) 134, 161, 283, 562, 1045, 1055, 1229, 1536, 1681
HpaII CCGG 2 cut(s) 97, 235
HphI GGTGA 4 cut(s) 925, 1013, 1166, 1686
Hpy166II GTNNAC 4 cut(s) 330, 404, 973, 1455
Hpy188I TCNGA 9 cut(s) 127, 155, 514, 601, 640, 1081, 1234, 1321, 1473
Hpy188III TCNNGA 6 cut(s) 140, 188, 203, 440, 1274, 1678
Hpy8I GTNNAC 4 cut(s) 330, 404, 973, 1455
Hpy99I CGWCG 1 cut(s) 189
HpyAV CCTTC 4 cut(s) 713, 874, 1271, 1348
HpyCH4III ACNGT 2 cut(s) 434, 1166
HpyCH4IV ACGT 1 cut(s) 906
HpyCH4V TGCA 9 cut(s) 50, 217, 224, 330, 362, 428, 968, 1061, 1136
HpyF10VI GCNNNNNNNGC 3 cut(s) 41, 272, 752
HpySE526I ACGT 1 cut(s) 906
Hsp92I GRCGYC 1 cut(s) 1457
Hsp92II CATG 6 cut(s) 454, 761, 1127, 1301, 1415, 1571
HspAI GCGC 1 cut(s) 76
Ksp22I TGATCA 2 cut(s) 601, 1300
Kzo9I GATC 6 cut(s) 181, 238, 601, 1237, 1300, 1394
LmnI GCTCC 6 cut(s) 156, 722, 958, 1276, 1543, 1605
Lsp1109I GCAGC 1 cut(s) 253
LweI GCATC 2 cut(s) 226, 1336
MaeI CTAG 6 cut(s) 111, 333, 683, 927, 1329, 1499
MaeII ACGT 1 cut(s) 906
MaeIII GTNAC 4 cut(s) 56, 808, 1001, 1111
MalI GATC 6 cut(s) 183, 240, 603, 1239, 1302, 1396
MboI GATC 6 cut(s) 181, 238, 601, 1237, 1300, 1394
MflI RGATCY 3 cut(s) 238, 1237, 1394
MhlI GDGCHC 5 cut(s) 153, 313, 332, 479, 733
MluCI AATT 3 cut(s) 655, 874, 1157
MlyI GAGTC 4 cut(s) 143, 292, 556, 1530
MmeI TCCRAC 4 cut(s) 284, 850, 1032, 1178
MroXI GAANNNNTTC 1 cut(s) 1256
MseI TTAA 5 cut(s) 72, 836, 1028, 1608, 1652
MslI CAYNNNNRTG 3 cut(s) 350, 1080, 1416
MspA1I CMGCKG 2 cut(s) 173, 1034
MspCI CTTAAG 1 cut(s) 71
MspI CCGG 2 cut(s) 97, 235
MspR9I CCNGG 8 cut(s) 97, 198, 236, 385, 666, 798, 841, 939
Mva1269I GAATGC 1 cut(s) 588
MvaI CCWGG 6 cut(s) 198, 385, 666, 798, 841, 939
MwoI GCNNNNNNNGC 3 cut(s) 41, 272, 752
NciI CCSGG 2 cut(s) 97, 236
NcoI CCATGG 1 cut(s) 1567
NdeII GATC 6 cut(s) 181, 238, 601, 1237, 1300, 1394
NlaIII CATG 6 cut(s) 454, 761, 1127, 1301, 1415, 1571
NlaIV GGNNCC 6 cut(s) 240, 398, 730, 936, 1141, 1272
NmuCI GTSAC 2 cut(s) 56, 1001
PctI GAATGC 1 cut(s) 588
PdmI GAANNNNTTC 1 cut(s) 1256
PfeI GAWTC 5 cut(s) 161, 1045, 1055, 1229, 1681
PflMI CCANNNNNTGG 2 cut(s) 763, 1280
PfoI TCCNGGA 1 cut(s) 234
PkrI GCNGC 1 cut(s) 268
PleI GAGTC 4 cut(s) 142, 291, 556, 1530
PmaCI CACGTG 1 cut(s) 907
PmlI CACGTG 1 cut(s) 907
PpsI GAGTC 4 cut(s) 142, 291, 556, 1530
Ppu21I YACGTR 1 cut(s) 907
Psp124BI GAGCTC 2 cut(s) 153, 479
Psp6I CCWGG 6 cut(s) 196, 383, 664, 796, 839, 937
PspCI CACGTG 1 cut(s) 907
PspGI CCWGG 6 cut(s) 196, 383, 664, 796, 839, 937
PspN4I GGNNCC 6 cut(s) 240, 398, 730, 936, 1141, 1272
PspPI GGNCC 1 cut(s) 387
PsuI RGATCY 3 cut(s) 238, 1237, 1394
PvuII CAGCTG 1 cut(s) 173
RseI CAYNNNNRTG 3 cut(s) 350, 1080, 1416
SacI GAGCTC 2 cut(s) 153, 479
SaqAI TTAA 5 cut(s) 72, 836, 1028, 1608, 1652
SatI GCNGC 1 cut(s) 267
Sau3AI GATC 6 cut(s) 181, 238, 601, 1237, 1300, 1394
Sau96I GGNCC 1 cut(s) 387
SchI GAGTC 4 cut(s) 143, 292, 556, 1530
ScrFI CCNGG 8 cut(s) 97, 198, 236, 385, 666, 798, 841, 939
SduI GDGCHC 5 cut(s) 153, 313, 332, 479, 733
SfaNI GCATC 2 cut(s) 226, 1336
SmiMI CAYNNNNRTG 3 cut(s) 350, 1080, 1416
SmlI CTYRAG 2 cut(s) 71, 140
SmoI CTYRAG 2 cut(s) 71, 140
Sse9I AATT 3 cut(s) 655, 874, 1157
SsiI CCGC 5 cut(s) 44, 377, 523, 931, 1032
SspI AATATT 1 cut(s) 20
SspMI CTAG 6 cut(s) 111, 333, 683, 927, 1329, 1499
SstI GAGCTC 2 cut(s) 153, 479
StyD4I CCNGG 8 cut(s) 95, 196, 234, 383, 664, 796, 839, 937
StyI CCWWGG 2 cut(s) 105, 1567
TaaI ACNGT 2 cut(s) 434, 1166
TaiI ACGT 1 cut(s) 909
TaqI TCGA 1 cut(s) 499
TasI AATT 3 cut(s) 655, 874, 1157
TfiI GAWTC 5 cut(s) 161, 1045, 1055, 1229, 1681
Tru1I TTAA 5 cut(s) 72, 836, 1028, 1608, 1652
Tru9I TTAA 5 cut(s) 72, 836, 1028, 1608, 1652
TscAI CASTG 3 cut(s) 231, 330, 975
TseFI GTSAC 2 cut(s) 56, 1001
TseI GCWGC 1 cut(s) 266
Tsp45I GTSAC 2 cut(s) 56, 1001
TspDTI ATGAA 6 cut(s) 455, 774, 993, 1026, 1140, 1416
TspGWI ACGGA 1 cut(s) 539
TspRI CASTG 3 cut(s) 231, 330, 975
Van91I CCANNNNNTGG 2 cut(s) 763, 1280
Vha464I CTTAAG 1 cut(s) 71
VneI GTGCAC 1 cut(s) 328
XapI RAATTY 2 cut(s) 655, 1157
XmiI GTMKAC 1 cut(s) 403
XmnI GAANNNNTTC 1 cut(s) 1256
XspI CTAG 6 cut(s) 111, 333, 683, 927, 1329, 1499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.