Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0009021

Physical Location & Seq

Genomic Coordinates Forward (+)

4335308 .. 4341696

Gene Structure 6389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG064700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGAATCGCATGCGCCTCAGCGTCGCCTCCACGCCGTTCAGTCCCACATACTCCCTCCCACCGCCGACGATCCTCAACCCCTCCTTCAGGCCAACCTCACCGCCGGCGACTATGCTCACGGGAAGGGCTACAGTGTAGTACTCCCGGAGAAATTGCAAACAGGAAAATGGAATGTGTACAGATCTGCACGATCGCCTTTCGAGCTTGTAACTCGTTTTGCTAAGCATCCGGAGATTGGGACATTGCACGACAACTTTGTACGTTCGGCTGAAACTTTCATAGATCACAAGTATTTGGGTACACGAATTCGGCCTGATGGAACTGTTGGAGAGTATAAATGGATGACATATGGAGAAACAGCAACAGTTCGGGAAGCATTAGGTTCCGGCCTACGATTGAACGGGATACAAAAAGGAGCTTCTGTGGGAGTTTTTTTCATAAACAGACCAGAGTGGTTGATTGTGGATCATGCTTGTTCTGCATATTCGTTCATCTCTGTTCCTTTATACGATACTCTTGGTATGTATATTACTCGAATCAGTTGCTCCAAGTTTGTAGATACCTGCTTTAACAGCTTATTAATTGGTCTAAGAGCAGGACCTGATGCAGTCAAGTATGTTGTGAATCATGCCAATGTACAAGCAATCTTTTGTTCAGTAGAGAATCTGAAAACATTGTTAAGCTTCCTTTCCGAGATCCCATCTGTAGCTCTTATAGTGGTTGTGGGAGGGGCAGATGAACACTTGCGTTCCCTTCCATCTATAACTGGAGTGAAACTTATGTCATATTTAGAGCTTGTCAGTCAGGGCCGCAGTAGTCTACAGCCTTTTTGCCCTCCTAATCCCGAAGATGTTGCAACCATCTGCTACACAAGTGGTACAACTGGAACACCAAAGGGTGTTGTGTTGACTCATGGAAACTTAATTTCAAGTTGTGCTGGATTCAGTCGTGCAGTGCAATTCATTTCATCTGATATTTACATATCCTATCTTCCTTTGGCACACATCTATGAGCGAGCTAATCAAATTGCCTTACTGTACTACGGTAGTGCTTGTGGTTTCTACCAGGGGGACAATCTGAAACTGATGGATGACCTGGCTGCATTAAGACCTACACTTTTTTCCAGTGTTCCACGGTTGTACAATCAAATATATGCTGGAATTACAAATGCTGTTAAAACATCGGGGATTCTAAAGGAGAGACTATTCAGAGCCGCCTACAATTCTAAGAAGCAGTCCGTGATGAGTGGTTCAACATCATCACCAATGTGGGACAGATTGATTTTTAATAAAATCAAGGCAAAGCTTGGAGGACGAATCCGTTTAATGTCATCTGGTGCTTCACCCTTGTCCCCTGATGTCATGGACTTCCTTAGGGTGTGCTTTGGTTGTGAAGTAATTGAAGGATATGGTATGACAGAGACTTCATGTGTCATAAGCATGACCGATGAGGGTGACACATTAACTGGCCATGTTGGTTCCCCCAATGCAGCCTGTGAAGTAAAACTGGTCGATGTCCCTGAAATGAATTACACTTCTGAGGACCAGCCATATCCTCGTGGGGAAATCTGTGTCCGGGGTCCCATTGTCTTCCAAGGCTACTACAAAGATGAAAACCAGACGAAGGAAGTAATTGATGTTGATGGTTGGCTGCATACGGGAGACATTGGTTTGTGGTTACCTGGAGGCCGGCTTAAGATCATTGATAGGAAAAAGAACATCTTCAAGTTGGCACAGGGTGAGTATATAGCACCAGAGAAGATTGAGAATGTCTATGCCAAGTGCCAATTTGTTGCTCAATGTTTTGTATACGGTGATAGCTTCAAGTCTTGTCTAGTAGCTATAGTTGCAGTGGATCCGAATGTATTGAAAGAGTGGGCTGCTTCTGAAGGCATAAAGTACGAAGATCTCAGACAATTGTGCAATAATCCAAGAGTAAGGTCTGCTGTTTTGGCTGACATGGATGCCATTGGAAAGGAGGCACAGTTGAGAGGTTTTGAATTTGCAAAAGCTGTAACTTTAGTTCCTGAACCATTCACAGTAGATAATGGCCTTCTCACTCCAACCTTCAAGATCAAGAGGCCTCAAGCAAAGGCACACTTTGCCGAAGCAATATCAAACATGTATTCTGAGCTTTCCATATCTGATGTTGTAACGAAAAAAATTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0010193 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0032787 GO:0042221 GO:0042493 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0071704 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

723

Amino Acids

79.61

Weight (kDa)

7.49

Isoelectric Point (pI)

36.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	109 - 535	3.5e-84	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009021)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27600
fragaria_vesca	FvH4_6g05910 FvH4_6g05910 FvH4_6g05910
prunus_persica	Prupe.3G211300_v2.0.a1 Prupe.6G325200_v2.0.a1 Prupe.6G325200_v2.0.a1 Prupe.6G325200_v2.0.a1 Prupe.6G325200_v2.0.a1 Prupe.8G000300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0454921
rosa_multiflora	Rmu_sc0001792.1_g000009 Rmu_sc0002169.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424680
rosa_rugosa	Rorug03G0002900 Rorug03G0003000
rosa_samantha	Rh3AG062800 Rh3BG064700 Rh3CG063600 Rh3DG064700 Rh6AG155800
rosa_wichuraiana	Rw3G004910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	572
AccI	GTMKAC	2 cut(s)	820, 1809
AccIII	TCCGGA	1 cut(s)	229
AciI	CCGC	4 cut(s)	63, 102, 811, 1215
AclWI	GGATC	5 cut(s)	65, 474, 691, 1850, 1863
AcoI	YGGCCR	1 cut(s)	1468
AcsI	RAATTY	2 cut(s)	306, 2000
AcuI	CTGAAG	2 cut(s)	71, 1908
AdeI	CACNNNGTG	1 cut(s)	1739
AfaI	GTAC	9 cut(s)	141, 179, 261, 301, 639, 880, 1040, 1142, 1901
AfiI	CCNNNNNNNGG	3 cut(s)	88, 236, 1624
AflII	CTTAAG	1 cut(s)	1694
AflIII	ACRYGT	1 cut(s)	2121
AgsI	TTSAA	9 cut(s)	400, 930, 1254, 1403, 1726, 1825, 1870, 2000, 2071
AjnI	CCWGG	3 cut(s)	1065, 1095, 1681
AleI	CACNNNNGTG	1 cut(s)	1267
Alw26I	GTCTC	3 cut(s)	1195, 1415, 1656
AlwI	GGATC	5 cut(s)	65, 474, 691, 1850, 1863
AlwNI	CAGNNNCTG	1 cut(s)	602
Aor13HI	TCCGGA	1 cut(s)	229
AoxI	GGCC	8 cut(s)	90, 311, 388, 808, 1468, 1687, 2050, 2081
ApeKI	GCWGC	4 cut(s)	1100, 1490, 1651, 1880
ApoI	RAATTY	2 cut(s)	306, 2000
AseI	ATTAAT	1 cut(s)	581
Asp700I	GAANNNNTTC	1 cut(s)	1721
AspLEI	GCGC	1 cut(s)	16
AspS9I	GGNCC	4 cut(s)	599, 808, 1543, 1580
AsuC2I	CCSGG	2 cut(s)	146, 1577
AsuHPI	GGTGA	6 cut(s)	91, 1254, 1335, 1466, 1751, 1826
AvaII	GGWCC	3 cut(s)	599, 1543, 1580
AxyI	CCTNAGG	1 cut(s)	1373
BalI	TGGCCA	1 cut(s)	1470
BamHI	GGATCC	1 cut(s)	1855
BauI	CACGAG	1 cut(s)	1557
BbsI	GAAGAC	1 cut(s)	1582
BbvCI	CCTCAGC	1 cut(s)	18
BbvI	GCAGC	4 cut(s)	1087, 1502, 1638, 1867
BccI	CCATC	6 cut(s)	311, 709, 766, 869, 1081, 1637
BceAI	ACGGC	1 cut(s)	20
BcgI	CGANNNNNNTGC	4 cut(s)	525, 559, 836, 870
BciT130I	CCWGG	3 cut(s)	1067, 1097, 1683
BciVI	GTATCC	1 cut(s)	399
BcnI	CCSGG	2 cut(s)	146, 1577
BcoDI	GTCTC	3 cut(s)	1195, 1415, 1656
BfaI	CTAG	1 cut(s)	1835
BfmI	CTRYAG	4 cut(s)	130, 705, 821, 1842
BfrI	CTTAAG	1 cut(s)	1694
BfuAI	ACCTGC	1 cut(s)	572
BfuI	GTATCC	1 cut(s)	399
BglII	AGATCT	2 cut(s)	182, 1906
BisI	GCNGC	6 cut(s)	811, 1101, 1215, 1491, 1652, 1881
BlpI	GCTNAGC	1 cut(s)	222
BlsI	GCNGC	6 cut(s)	812, 1102, 1216, 1492, 1653, 1882
BmcAI	AGTACT	1 cut(s)	141
Bme1390I	CCNGG	5 cut(s)	146, 1067, 1097, 1577, 1683
Bme18I	GGWCC	3 cut(s)	599, 1543, 1580
BmgT120I	GGNCC	4 cut(s)	599, 808, 1543, 1580
BmiI	GGNNCC	5 cut(s)	385, 1480, 1581, 1582, 1857
BmrFI	CCNGG	5 cut(s)	146, 1067, 1097, 1577, 1683
BmsI	GCATC	3 cut(s)	235, 595, 1954
BpiI	GAAGAC	1 cut(s)	1582
BpmI	CTGGAG	2 cut(s)	789, 1704
Bpu10I	CCTNAGC	1 cut(s)	18
Bpu1102I	GCTNAGC	1 cut(s)	222
BpuEI	CTTGAG	1 cut(s)	2070
BpuMI	CCSGG	2 cut(s)	146, 1577
BsaJI	CCNNGG	4 cut(s)	1066, 1133, 1576, 1594
BsaWI	WCCGGW	1 cut(s)	229
BsaXI	ACNNNNNCTCC	4 cut(s)	408, 438, 1970, 2000
Bsc4I	CCNNNNNNNGG	3 cut(s)	88, 236, 1624
Bse118I	RCCGGY	2 cut(s)	104, 1689
Bse1I	ACTGG	5 cut(s)	772, 889, 1125, 1471, 1512
Bse21I	CCTNAGG	1 cut(s)	1373
Bse3DI	GCAATG	1 cut(s)	242
BseAI	TCCGGA	1 cut(s)	229
BseBI	CCWGG	3 cut(s)	1067, 1097, 1683
BseDI	CCNNGG	4 cut(s)	1066, 1133, 1576, 1594
BseGI	GGATG	4 cut(s)	226, 348, 1096, 1969
BseLI	CCNNNNNNNGG	3 cut(s)	88, 236, 1624
BseMI	GCAATG	1 cut(s)	242
BseMII	CTCAG	4 cut(s)	32, 1530, 1924, 2121
BseNI	ACTGG	5 cut(s)	772, 889, 1125, 1471, 1512
BseXI	GCAGC	4 cut(s)	1087, 1502, 1638, 1867
BsgI	GTGCAG	2 cut(s)	171, 972
Bsh1285I	CGRYCG	1 cut(s)	194
BshFI	GGCC	8 cut(s)	92, 313, 390, 810, 1470, 1689, 2052, 2083
BsiEI	CGRYCG	1 cut(s)	194
BsiSI	CCGG	6 cut(s)	105, 146, 230, 387, 1576, 1690
BslFI	GGGAC	7 cut(s)	28, 253, 1085, 1286, 1336, 1502, 1566
BslI	CCNNNNNNNGG	3 cut(s)	88, 236, 1624
BsmAI	GTCTC	3 cut(s)	1195, 1415, 1656
BsmFI	GGGAC	7 cut(s)	28, 253, 1085, 1286, 1336, 1502, 1566
BsnI	GGCC	8 cut(s)	92, 313, 390, 810, 1470, 1689, 2052, 2083
Bsp13I	TCCGGA	1 cut(s)	229
Bsp1407I	TGTACA	3 cut(s)	177, 637, 1140
Bsp1720I	GCTNAGC	1 cut(s)	222
BspACI	CCGC	4 cut(s)	63, 102, 811, 1215
BspANI	GGCC	8 cut(s)	92, 313, 390, 810, 1470, 1689, 2052, 2083
BspCNI	CTCAG	4 cut(s)	31, 1531, 1923, 2122
BspEI	TCCGGA	1 cut(s)	229
BspLI	GGNNCC	5 cut(s)	385, 1480, 1581, 1582, 1857
BspMI	ACCTGC	1 cut(s)	572
BspPI	GGATC	5 cut(s)	65, 474, 691, 1850, 1863
BspTI	CTTAAG	1 cut(s)	1694
BsrDI	GCAATG	1 cut(s)	242
BsrFI	RCCGGY	2 cut(s)	104, 1689
BsrGI	TGTACA	3 cut(s)	177, 637, 1140
BsrI	ACTGG	5 cut(s)	772, 889, 1125, 1471, 1512
BssAI	RCCGGY	2 cut(s)	104, 1689
BssECI	CCNNGG	4 cut(s)	1066, 1133, 1576, 1594
BssNAI	GTATAC	1 cut(s)	1810
BssSI	CACGAG	1 cut(s)	1557
BssT1I	CCWWGG	1 cut(s)	1594
Bst1107I	GTATAC	1 cut(s)	1810
Bst2BI	CACGAG	1 cut(s)	1557
Bst2UI	CCWGG	3 cut(s)	1067, 1097, 1683
Bst4CI	ACNGT	9 cut(s)	134, 325, 367, 1038, 1046, 1137, 1814, 1986, 2041
BstAFI	CTTAAG	1 cut(s)	1694
BstAPI	GCANNNNNTGC	1 cut(s)	2102
BstAUI	TGTACA	3 cut(s)	177, 637, 1140
BstC8I	GCNNGC	4 cut(s)	12, 106, 1017, 1691
BstDEI	CTNAG	8 cut(s)	18, 222, 590, 1227, 1373, 1539, 1910, 2130
BstDSI	CCRYGG	1 cut(s)	1133
BstEII	GGTNACC	1 cut(s)	1677
BstENI	CCTNNNNNAGG	1 cut(s)	86
BstF5I	GGATG	4 cut(s)	226, 348, 1096, 1969
BstHHI	GCGC	1 cut(s)	16
BstMAI	GTCTC	3 cut(s)	1195, 1415, 1656
BstMCI	CGRYCG	1 cut(s)	194
BstMWI	GCNNNNNNNGC	6 cut(s)	202, 479, 573, 1847, 1952, 2102
BstNI	CCWGG	3 cut(s)	1067, 1097, 1683
BstNSI	RCATGY	2 cut(s)	14, 2125
BstPI	GGTNACC	1 cut(s)	1677
BstSCI	CCNGG	5 cut(s)	144, 1065, 1095, 1575, 1681
BstSFI	CTRYAG	4 cut(s)	130, 705, 821, 1842
BstV1I	GCAGC	4 cut(s)	1087, 1502, 1638, 1867
BstV2I	GAAGAC	1 cut(s)	1582
BstX2I	RGATCY	4 cut(s)	182, 696, 1855, 1906
BstYI	RGATCY	4 cut(s)	182, 696, 1855, 1906
BstZ17I	GTATAC	1 cut(s)	1810
Bsu36I	CCTNAGG	1 cut(s)	1373
BsuI	GTATCC	1 cut(s)	399
BsuRI	GGCC	8 cut(s)	92, 313, 390, 810, 1470, 1689, 2052, 2083
BtgI	CCRYGG	1 cut(s)	1133
BtsCI	GGATG	4 cut(s)	226, 348, 1096, 1969
BtsI	GCAGTG	2 cut(s)	960, 1857
BtsIMutI	CAGTG	4 cut(s)	139, 960, 1132, 1857
BveI	ACCTGC	1 cut(s)	572
Cac8I	GCNNGC	4 cut(s)	12, 106, 1017, 1691
CaiI	CAGNNNCTG	1 cut(s)	602
CfoI	GCGC	1 cut(s)	16
Cfr10I	RCCGGY	2 cut(s)	104, 1689
Cfr13I	GGNCC	4 cut(s)	599, 808, 1543, 1580
CseI	GACGC	1 cut(s)	11
Csp6I	GTAC	9 cut(s)	140, 178, 260, 300, 638, 879, 1039, 1141, 1900
CviQI	GTAC	9 cut(s)	140, 178, 260, 300, 638, 879, 1039, 1141, 1900
DdeI	CTNAG	8 cut(s)	18, 222, 590, 1227, 1373, 1539, 1910, 2130
DraIII	CACNNNGTG	1 cut(s)	1739
EaeI	YGGCCR	1 cut(s)	1468
Eco130I	CCWWGG	1 cut(s)	1594
Eco147I	AGGCCT	1 cut(s)	2083
Eco47I	GGWCC	3 cut(s)	599, 1543, 1580
Eco57I	CTGAAG	2 cut(s)	71, 1908
Eco81I	CCTNAGG	1 cut(s)	1373
Eco91I	GGTNACC	1 cut(s)	1677
EcoNI	CCTNNNNNAGG	1 cut(s)	86
EcoO109I	RGGNCCY	2 cut(s)	599, 1580
EcoO65I	GGTNACC	1 cut(s)	1677
EcoRI	GAATTC	1 cut(s)	306
EcoRII	CCWGG	3 cut(s)	1065, 1095, 1681
EcoT14I	CCWWGG	1 cut(s)	1594
ErhI	CCWWGG	1 cut(s)	1594
FalI	AAGNNNNNCTT	4 cut(s)	1706, 1738, 2084, 2116
FaqI	GGGAC	7 cut(s)	28, 253, 1085, 1286, 1336, 1502, 1566
FauNDI	CATATG	1 cut(s)	349
FblI	GTMKAC	2 cut(s)	820, 1809
Fnu4HI	GCNGC	6 cut(s)	811, 1101, 1215, 1491, 1652, 1881
FokI	GGATG	4 cut(s)	213, 355, 1103, 1976
Fsp4HI	GCNGC	6 cut(s)	811, 1101, 1215, 1491, 1652, 1881
FspBI	CTAG	1 cut(s)	1835
GlaI	GCGC	1 cut(s)	15
GluI	GCNGC	6 cut(s)	811, 1101, 1215, 1491, 1652, 1881
GsuI	CTGGAG	2 cut(s)	789, 1704
HaeIII	GGCC	8 cut(s)	92, 313, 390, 810, 1470, 1689, 2052, 2083
HapII	CCGG	6 cut(s)	105, 146, 230, 387, 1576, 1690
HgaI	GACGC	1 cut(s)	11
HhaI	GCGC	1 cut(s)	16
Hin6I	GCGC	1 cut(s)	14
HinP1I	GCGC	1 cut(s)	14
HincII	GTYRAC	1 cut(s)	909
HindII	GTYRAC	1 cut(s)	909
HindIII	AAGCTT	2 cut(s)	682, 1304
HinfI	GANTC	8 cut(s)	5, 537, 625, 664, 910, 942, 1189, 1317
HpaII	CCGG	6 cut(s)	105, 146, 230, 387, 1576, 1690
HphI	GGTGA	6 cut(s)	91, 1254, 1335, 1466, 1751, 1826
Hpy166II	GTNNAC	5 cut(s)	178, 302, 821, 909, 1810
Hpy188III	TCNNGA	6 cut(s)	230, 371, 845, 2027, 2071, 2077
Hpy8I	GTNNAC	5 cut(s)	178, 302, 821, 909, 1810
Hpy99I	CGWCG	2 cut(s)	27, 71
HpyAV	CCTTC	8 cut(s)	95, 118, 764, 1397, 1618, 1883, 2063, 2077
HpyCH4III	ACNGT	9 cut(s)	134, 325, 367, 1038, 1046, 1137, 1814, 1986, 2041
HpyCH4IV	ACGT	1 cut(s)	262
HpyF10VI	GCNNNNNNNGC	6 cut(s)	202, 479, 573, 1847, 1952, 2102
HpyF3I	CTNAG	8 cut(s)	18, 222, 590, 1227, 1373, 1539, 1910, 2130
HpySE526I	ACGT	1 cut(s)	262
HspAI	GCGC	1 cut(s)	14
KflI	GGGWCCC	1 cut(s)	1580
Kpn2I	TCCGGA	1 cut(s)	229
KroI	GCCGGC	2 cut(s)	104, 1689
KroNI	GCCGGC	2 cut(s)	106, 1691
LmnI	GCTCC	2 cut(s)	416, 551
Lsp1109I	GCAGC	4 cut(s)	1087, 1502, 1638, 1867
LweI	GCATC	3 cut(s)	235, 595, 1954
MaeI	CTAG	1 cut(s)	1835
MaeII	ACGT	1 cut(s)	262
MaeIII	GTNAC	5 cut(s)	208, 1454, 1677, 2014, 2152
MboII	GAAGA	6 cut(s)	860, 983, 1582, 1714, 1771, 1916
MfeI	CAATTG	1 cut(s)	1916
MflI	RGATCY	4 cut(s)	182, 696, 1855, 1906
MlsI	TGGCCA	1 cut(s)	1470
MluNI	TGGCCA	1 cut(s)	1470
MlyI	GAGTC	1 cut(s)	904
MmeI	TCCRAC	2 cut(s)	307, 2087
Mox20I	TGGCCA	1 cut(s)	1470
MreI	CGCCGGCG	1 cut(s)	104
MroI	TCCGGA	1 cut(s)	229
MroNI	GCCGGC	2 cut(s)	104, 1689
MroXI	GAANNNNTTC	1 cut(s)	1721
MscI	TGGCCA	1 cut(s)	1470
MslI	CAYNNNNRTG	4 cut(s)	633, 1008, 1267, 1439
Msp20I	TGGCCA	1 cut(s)	1470
MspCI	CTTAAG	1 cut(s)	1694
MspI	CCGG	6 cut(s)	105, 146, 230, 387, 1576, 1690
MspR9I	CCNGG	5 cut(s)	146, 1067, 1097, 1577, 1683
MunI	CAATTG	1 cut(s)	1916
MvaI	CCWGG	3 cut(s)	1067, 1097, 1683
MwoI	GCNNNNNNNGC	6 cut(s)	202, 479, 573, 1847, 1952, 2102
NaeI	GCCGGC	2 cut(s)	106, 1691
NciI	CCSGG	2 cut(s)	146, 1577
NdeI	CATATG	1 cut(s)	349
NgoMIV	GCCGGC	2 cut(s)	104, 1689
NlaIV	GGNNCC	5 cut(s)	385, 1480, 1581, 1582, 1857
NmuCI	GTSAC	1 cut(s)	1454
NspI	RCATGY	2 cut(s)	14, 2125
OliI	CACNNNNGTG	1 cut(s)	1267
PaeI	GCATGC	1 cut(s)	14
PceI	AGGCCT	1 cut(s)	2083
PciI	ACATGT	1 cut(s)	2121
PdiI	GCCGGC	2 cut(s)	106, 1691
PdmI	GAANNNNTTC	1 cut(s)	1721
PfeI	GAWTC	7 cut(s)	5, 537, 625, 664, 942, 1189, 1317
PfoI	TCCNGGA	1 cut(s)	144
PkrI	GCNGC	6 cut(s)	812, 1102, 1216, 1492, 1653, 1882
Ple19I	CGATCG	1 cut(s)	194
PleI	GAGTC	1 cut(s)	904
PpsI	GAGTC	1 cut(s)	904
PpuMI	RGGWCCY	2 cut(s)	599, 1580
PscI	ACATGT	1 cut(s)	2121
PshBI	ATTAAT	1 cut(s)	581
Psp5II	RGGWCCY	2 cut(s)	599, 1580
Psp6I	CCWGG	3 cut(s)	1065, 1095, 1681
PspEI	GGTNACC	1 cut(s)	1677
PspGI	CCWGG	3 cut(s)	1065, 1095, 1681
PspN4I	GGNNCC	5 cut(s)	385, 1480, 1581, 1582, 1857
PspPI	GGNCC	4 cut(s)	599, 808, 1543, 1580
PspPPI	RGGWCCY	2 cut(s)	599, 1580
PsrI	GAACNNNNNNTAC	2 cut(s)	2007, 2039
PstNI	CAGNNNCTG	1 cut(s)	602
PsuI	RGATCY	4 cut(s)	182, 696, 1855, 1906
PvuI	CGATCG	1 cut(s)	194
RsaI	GTAC	9 cut(s)	141, 179, 261, 301, 639, 880, 1040, 1142, 1901
RsaNI	GTAC	9 cut(s)	140, 178, 260, 300, 638, 879, 1039, 1141, 1900
RseI	CAYNNNNRTG	4 cut(s)	633, 1008, 1267, 1439
SatI	GCNGC	6 cut(s)	811, 1101, 1215, 1491, 1652, 1881
Sau96I	GGNCC	4 cut(s)	599, 808, 1543, 1580
ScaI	AGTACT	1 cut(s)	141
SchI	GAGTC	1 cut(s)	904
ScrFI	CCNGG	5 cut(s)	146, 1067, 1097, 1577, 1683
SfaNI	GCATC	3 cut(s)	235, 595, 1954
SfcI	CTRYAG	4 cut(s)	130, 705, 821, 1842
SgrAI	CRCCGGYG	1 cut(s)	104
SinI	GGWCC	3 cut(s)	599, 1543, 1580
SmiMI	CAYNNNNRTG	4 cut(s)	633, 1008, 1267, 1439
SmlI	CTYRAG	2 cut(s)	1694, 2085
SmoI	CTYRAG	2 cut(s)	1694, 2085
SphI	GCATGC	1 cut(s)	14
SseBI	AGGCCT	1 cut(s)	2083
SsiI	CCGC	4 cut(s)	63, 102, 811, 1215
SspMI	CTAG	1 cut(s)	1835
StuI	AGGCCT	1 cut(s)	2083
StyD4I	CCNGG	5 cut(s)	144, 1065, 1095, 1575, 1681
StyI	CCWWGG	1 cut(s)	1594
TaaI	ACNGT	9 cut(s)	134, 325, 367, 1038, 1046, 1137, 1814, 1986, 2041
TaiI	ACGT	1 cut(s)	265
TaqI	TCGA	3 cut(s)	201, 535, 1512
TaqII	GACCGA	1 cut(s)	1460
TatI	WGTACW	5 cut(s)	139, 177, 637, 1038, 1140
TauI	GCSGC	2 cut(s)	813, 1217
TfiI	GAWTC	7 cut(s)	5, 537, 625, 664, 942, 1189, 1317
TscAI	CASTG	4 cut(s)	139, 960, 1132, 1857
TseFI	GTSAC	1 cut(s)	1454
TseI	GCWGC	4 cut(s)	1100, 1490, 1651, 1880
Tsp45I	GTSAC	1 cut(s)	1454
TspDTI	ATGAA	9 cut(s)	268, 427, 481, 753, 952, 957, 1416, 1541, 1626
TspGWI	ACGGA	2 cut(s)	1228, 1310
TspRI	CASTG	4 cut(s)	139, 960, 1132, 1857
Vha464I	CTTAAG	1 cut(s)	1694
VpaK11BI	GGWCC	3 cut(s)	599, 1543, 1580
VspI	ATTAAT	1 cut(s)	581
XagI	CCTNNNNNAGG	1 cut(s)	86
XapI	RAATTY	2 cut(s)	306, 2000
XceI	RCATGY	2 cut(s)	14, 2125
XmiI	GTMKAC	2 cut(s)	820, 1809
XmnI	GAANNNNTTC	1 cut(s)	1721
XspI	CTAG	1 cut(s)	1835
ZrmI	AGTACT	1 cut(s)	141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.