Long chain acyl-CoA synthetase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ResIII | PF04851 | 25 - 193 | 5e-14 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 26 - 193 | 8.9e-16 | DEAD/DEAH box helicase |
| Helicase_C | PF00271 | 372 - 490 | 3e-16 | Helicase conserved C-terminal domain |
| Dicer_dimer | PF03368 | 561 - 635 | 3.2e-12 | Dicer dimerisation domain |
| PAZ | PF02170 | 823 - 950 | 1.1e-12 | PAZ domain |
| Ribonuclease_3 | PF00636 | 994 - 1111 | 1.6e-18 | Ribonuclease III domain |
| Ribonucleas_3_3 | PF14622 | 1161 - 1298 | 5.9e-15 | Ribonuclease-III-like |
| Ribonuclease_3 | PF00636 | 1184 - 1295 | 4.9e-22 | Ribonuclease III domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2197 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 317, 1675 |
| Acc36I | ACCTGC | 3 cut(s) | 1747, 2197, 2492 |
| AccI | GTMKAC | 4 cut(s) | 321, 659, 755, 806 |
| AccII | CGCG | 2 cut(s) | 266, 732 |
| AccIII | TCCGGA | 1 cut(s) | 2493 |
| AciI | CCGC | 5 cut(s) | 112, 732, 1765, 2715, 3553 |
| AclI | AACGTT | 1 cut(s) | 3448 |
| AclWI | GGATC | 9 cut(s) | 50, 1046, 2055, 2265, 2485, 2901, 3161, 3476, 3529 |
| AcuI | CTGAAG | 1 cut(s) | 1853 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1724, 2522, 3114, 3115, 3496 |
| AflIII | ACRYGT | 1 cut(s) | 662 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1255, 3652 |
| AjiI | CACGTC | 1 cut(s) | 2408 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2955, 2987, 3783, 3815 |
| AleI | CACNNNNGTG | 2 cut(s) | 122, 2393 |
| Alw26I | GTCTC | 9 cut(s) | 128, 303, 629, 1130, 1754, 2353, 3186, 3809, 3858 |
| AlwI | GGATC | 9 cut(s) | 50, 1046, 2055, 2265, 2485, 2901, 3161, 3476, 3529 |
| Aor13HI | TCCGGA | 1 cut(s) | 2493 |
| AoxI | GGCC | 3 cut(s) | 1153, 1462, 3064 |
| AseI | ATTAAT | 1 cut(s) | 1496 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 1233, 1332, 2970, 3066, 3094, 4028 |
| AspS9I | GGNCC | 6 cut(s) | 820, 930, 1153, 2343, 3203, 4152 |
| AsuC2I | CCSGG | 2 cut(s) | 3116, 3141 |
| AsuHPI | GGTGA | 8 cut(s) | 998, 1360, 2380, 2781, 2837, 3347, 3621, 3676 |
| AsuII | TTCGAA | 1 cut(s) | 3992 |
| AsuNHI | GCTAGC | 1 cut(s) | 3023 |
| AvaII | GGWCC | 5 cut(s) | 820, 930, 2343, 3203, 4152 |
| BanII | GRGCYC | 2 cut(s) | 2640, 3933 |
| BbsI | GAAGAC | 4 cut(s) | 214, 1671, 2683, 4121 |
| BccI | CCATC | 9 cut(s) | 471, 751, 976, 1054, 1718, 2285, 2585, 2839, 2933 |
| BceAI | ACGGC | 2 cut(s) | 1449, 2645 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 256, 290 |
| BciVI | GTATCC | 1 cut(s) | 2177 |
| BclI | TGATCA | 2 cut(s) | 447, 3591 |
| BcnI | CCSGG | 2 cut(s) | 3116, 3141 |
| BcoDI | GTCTC | 9 cut(s) | 128, 303, 629, 1130, 1754, 2353, 3186, 3809, 3858 |
| BfaI | CTAG | 8 cut(s) | 974, 1458, 1470, 2013, 2987, 3024, 3494, 3857 |
| BfmI | CTRYAG | 5 cut(s) | 1600, 1639, 2218, 2579, 3786 |
| BfuAI | ACCTGC | 3 cut(s) | 1747, 2197, 2492 |
| BfuI | GTATCC | 1 cut(s) | 2177 |
| BmcAI | AGTACT | 1 cut(s) | 2618 |
| Bme18I | GGWCC | 5 cut(s) | 820, 930, 2343, 3203, 4152 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1255, 3652 |
| BmgBI | CACGTC | 1 cut(s) | 2408 |
| BmgT120I | GGNCC | 6 cut(s) | 820, 930, 1153, 2343, 3203, 4152 |
| BmiI | GGNNCC | 7 cut(s) | 12, 40, 231, 1154, 1715, 2344, 3423 |
| BmtI | GCTAGC | 1 cut(s) | 3027 |
| BpiI | GAAGAC | 4 cut(s) | 214, 1671, 2683, 4121 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 125, 157 |
| BpmI | CTGGAG | 6 cut(s) | 1677, 1693, 1694, 2870, 3210, 3927 |
| Bpu14I | TTCGAA | 1 cut(s) | 3992 |
| BpuEI | CTTGAG | 2 cut(s) | 653, 4168 |
| BpuMI | CCSGG | 2 cut(s) | 3116, 3141 |
| Bsa29I | ATCGAT | 1 cut(s) | 1370 |
| BsaAI | YACGTR | 1 cut(s) | 2623 |
| BsaI | GGTCTC | 3 cut(s) | 128, 1754, 2353 |
| BsaJI | CCNNGG | 9 cut(s) | 963, 1671, 1745, 2338, 2339, 2502, 3538, 3828, 4019 |
| BsaWI | WCCGGW | 1 cut(s) | 2493 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 691, 721, 3723, 3753, 3831, 3861 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1724, 2522, 3114, 3115, 3496 |
| Bse118I | RCCGGY | 1 cut(s) | 137 |
| Bse3DI | GCAATG | 2 cut(s) | 1093, 1266 |
| BseAI | TCCGGA | 1 cut(s) | 2493 |
| BseCI | ATCGAT | 1 cut(s) | 1370 |
| BseDI | CCNNGG | 9 cut(s) | 963, 1671, 1745, 2338, 2339, 2502, 3538, 3828, 4019 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1724, 2522, 3114, 3115, 3496 |
| BseMI | GCAATG | 2 cut(s) | 1093, 1266 |
| BseMII | CTCAG | 5 cut(s) | 398, 531, 678, 3522, 3804 |
| BseRI | GAGGAG | 4 cut(s) | 1973, 2113, 2570, 3421 |
| BseYI | CCCAGC | 1 cut(s) | 3804 |
| Bsh1236I | CGCG | 2 cut(s) | 266, 732 |
| BshFI | GGCC | 3 cut(s) | 1155, 1464, 3066 |
| BshVI | ATCGAT | 1 cut(s) | 1370 |
| BsiSI | CCGG | 4 cut(s) | 138, 2494, 3115, 3140 |
| BslFI | GGGAC | 4 cut(s) | 518, 1561, 1961, 2356 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1724, 2522, 3114, 3115, 3496 |
| BsmAI | GTCTC | 9 cut(s) | 128, 303, 629, 1130, 1754, 2353, 3186, 3809, 3858 |
| BsmFI | GGGAC | 4 cut(s) | 518, 1561, 1961, 2356 |
| BsmI | GAATGC | 2 cut(s) | 92, 464 |
| BsnI | GGCC | 3 cut(s) | 1155, 1464, 3066 |
| Bso31I | GGTCTC | 3 cut(s) | 128, 1754, 2353 |
| Bsp119I | TTCGAA | 1 cut(s) | 3992 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2640, 3933 |
| Bsp13I | TCCGGA | 1 cut(s) | 2493 |
| Bsp1407I | TGTACA | 2 cut(s) | 2455, 3606 |
| Bsp19I | CCATGG | 1 cut(s) | 4019 |
| BspACI | CCGC | 5 cut(s) | 112, 732, 1765, 2715, 3553 |
| BspANI | GGCC | 3 cut(s) | 1155, 1464, 3066 |
| BspCNI | CTCAG | 5 cut(s) | 399, 532, 679, 3523, 3805 |
| BspDI | ATCGAT | 1 cut(s) | 1370 |
| BspEI | TCCGGA | 1 cut(s) | 2493 |
| BspFNI | CGCG | 2 cut(s) | 266, 732 |
| BspHI | TCATGA | 2 cut(s) | 3058, 3357 |
| BspLI | GGNNCC | 7 cut(s) | 12, 40, 231, 1154, 1715, 2344, 3423 |
| BspMAI | CTGCAG | 1 cut(s) | 2583 |
| BspMI | ACCTGC | 3 cut(s) | 1747, 2197, 2492 |
| BspOI | GCTAGC | 1 cut(s) | 3027 |
| BspPI | GGATC | 9 cut(s) | 50, 1046, 2055, 2265, 2485, 2901, 3161, 3476, 3529 |
| BspT104I | TTCGAA | 1 cut(s) | 3992 |
| BspTNI | GGTCTC | 3 cut(s) | 128, 1754, 2353 |
| BsrDI | GCAATG | 2 cut(s) | 1093, 1266 |
| BsrFI | RCCGGY | 1 cut(s) | 137 |
| BsrGI | TGTACA | 2 cut(s) | 2455, 3606 |
| BssAI | RCCGGY | 1 cut(s) | 137 |
| BssECI | CCNNGG | 9 cut(s) | 963, 1671, 1745, 2338, 2339, 2502, 3538, 3828, 4019 |
| BssNAI | GTATAC | 2 cut(s) | 660, 756 |
| BssT1I | CCWWGG | 4 cut(s) | 1745, 2502, 3828, 4019 |
| Bst1107I | GTATAC | 2 cut(s) | 660, 756 |
| Bst4CI | ACNGT | 9 cut(s) | 1283, 1438, 1455, 2114, 2164, 2219, 2471, 2661, 2772 |
| Bst6I | CTCTTC | 3 cut(s) | 1374, 1599, 1752 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 98 |
| BstAUI | TGTACA | 2 cut(s) | 2455, 3606 |
| BstBAI | YACGTR | 1 cut(s) | 2623 |
| BstBI | TTCGAA | 1 cut(s) | 3992 |
| BstDSI | CCRYGG | 1 cut(s) | 4019 |
| BstEII | GGTNACC | 1 cut(s) | 476 |
| BstFNI | CGCG | 2 cut(s) | 266, 732 |
| BstMAI | GTCTC | 9 cut(s) | 128, 303, 629, 1130, 1754, 2353, 3186, 3809, 3858 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 98, 920, 2535, 2644, 3430, 3689, 3698, 4100 |
| BstNSI | RCATGY | 9 cut(s) | 666, 762, 1848, 2191, 2705, 2905, 3526, 4094, 4137 |
| BstPI | GGTNACC | 1 cut(s) | 476 |
| BstSFI | CTRYAG | 5 cut(s) | 1600, 1639, 2218, 2579, 3786 |
| BstSNI | TACGTA | 1 cut(s) | 2623 |
| BstUI | CGCG | 2 cut(s) | 266, 732 |
| BstV2I | GAAGAC | 4 cut(s) | 214, 1671, 2683, 4121 |
| BstX2I | RGATCY | 1 cut(s) | 3534 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3177 |
| BstYI | RGATCY | 1 cut(s) | 3534 |
| BstZ17I | GTATAC | 2 cut(s) | 660, 756 |
| Bsu15I | ATCGAT | 1 cut(s) | 1370 |
| BsuI | GTATCC | 1 cut(s) | 2177 |
| BsuRI | GGCC | 3 cut(s) | 1155, 1464, 3066 |
| BsuTUI | ATCGAT | 1 cut(s) | 1370 |
| BtgI | CCRYGG | 1 cut(s) | 4019 |
| BtrI | CACGTC | 1 cut(s) | 2408 |
| BtsI | GCAGTG | 1 cut(s) | 2026 |
| BveI | ACCTGC | 3 cut(s) | 1747, 2197, 2492 |
| CciI | TCATGA | 2 cut(s) | 3058, 3357 |
| Cfr10I | RCCGGY | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 6 cut(s) | 820, 930, 1153, 2343, 3203, 4152 |
| ClaI | ATCGAT | 1 cut(s) | 1370 |
| CseI | GACGC | 4 cut(s) | 272, 2374, 2688, 3964 |
| DraI | TTTAAA | 6 cut(s) | 424, 718, 918, 1735, 2173, 3217 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 317, 1675 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1255, 3652 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 317, 1675 |
| Eam1104I | CTCTTC | 3 cut(s) | 1374, 1599, 1752 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1255, 3652 |
| EarI | CTCTTC | 3 cut(s) | 1374, 1599, 1752 |
| Eco105I | TACGTA | 1 cut(s) | 2623 |
| Eco130I | CCWWGG | 4 cut(s) | 1745, 2502, 3828, 4019 |
| Eco147I | AGGCCT | 1 cut(s) | 3066 |
| Eco24I | GRGCYC | 2 cut(s) | 2640, 3933 |
| Eco31I | GGTCTC | 3 cut(s) | 128, 1754, 2353 |
| Eco47I | GGWCC | 5 cut(s) | 820, 930, 2343, 3203, 4152 |
| Eco57I | CTGAAG | 1 cut(s) | 1853 |
| Eco91I | GGTNACC | 1 cut(s) | 476 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1153, 4152 |
| EcoO65I | GGTNACC | 1 cut(s) | 476 |
| EcoRI | GAATTC | 2 cut(s) | 646, 2247 |
| EcoT14I | CCWWGG | 4 cut(s) | 1745, 2502, 3828, 4019 |
| EcoT22I | ATGCAT | 3 cut(s) | 2844, 4002, 4096 |
| EcoT38I | GRGCYC | 2 cut(s) | 2640, 3933 |
| ErhI | CCWWGG | 4 cut(s) | 1745, 2502, 3828, 4019 |
| FaqI | GGGAC | 4 cut(s) | 518, 1561, 1961, 2356 |
| FauI | CCCGC | 3 cut(s) | 725, 1772, 2708 |
| FauNDI | CATATG | 2 cut(s) | 487, 3400 |
| FbaI | TGATCA | 2 cut(s) | 447, 3591 |
| FblI | GTMKAC | 4 cut(s) | 321, 659, 755, 806 |
| FriOI | GRGCYC | 2 cut(s) | 2640, 3933 |
| FspBI | CTAG | 8 cut(s) | 974, 1458, 1470, 2013, 2987, 3024, 3494, 3857 |
| GsaI | CCCAGC | 1 cut(s) | 3808 |
| GsuI | CTGGAG | 6 cut(s) | 1677, 1693, 1694, 2870, 3210, 3927 |
| HaeIII | GGCC | 3 cut(s) | 1155, 1464, 3066 |
| HapII | CCGG | 4 cut(s) | 138, 2494, 3115, 3140 |
| HgaI | GACGC | 4 cut(s) | 272, 2374, 2688, 3964 |
| HincII | GTYRAC | 3 cut(s) | 31, 322, 807 |
| HindII | GTYRAC | 3 cut(s) | 31, 322, 807 |
| HindIII | AAGCTT | 6 cut(s) | 814, 1663, 1854, 2105, 2283, 3431 |
| HpaII | CCGG | 4 cut(s) | 138, 2494, 3115, 3140 |
| HphI | GGTGA | 8 cut(s) | 998, 1360, 2380, 2781, 2837, 3347, 3621, 3676 |
| Hpy99I | CGWCG | 1 cut(s) | 38 |
| HpyCH4III | ACNGT | 9 cut(s) | 1283, 1438, 1455, 2114, 2164, 2219, 2471, 2661, 2772 |
| HpyCH4IV | ACGT | 3 cut(s) | 2407, 2622, 3448 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 98, 920, 2535, 2644, 3430, 3689, 3698, 4100 |
| HpySE526I | ACGT | 3 cut(s) | 2407, 2622, 3448 |
| Kpn2I | TCCGGA | 1 cut(s) | 2493 |
| Ksp22I | TGATCA | 2 cut(s) | 447, 3591 |
| MaeI | CTAG | 8 cut(s) | 974, 1458, 1470, 2013, 2987, 3024, 3494, 3857 |
| MaeII | ACGT | 3 cut(s) | 2407, 2622, 3448 |
| MaeIII | GTNAC | 8 cut(s) | 77, 476, 2386, 2664, 2787, 3545, 3627, 4078 |
| MfeI | CAATTG | 2 cut(s) | 1065, 3762 |
| MflI | RGATCY | 1 cut(s) | 3534 |
| MhlI | GDGCHC | 2 cut(s) | 2640, 3933 |
| MlyI | GAGTC | 5 cut(s) | 327, 376, 1583, 1685, 3860 |
| MmeI | TCCRAC | 4 cut(s) | 2096, 2532, 2945, 3100 |
| Mph1103I | ATGCAT | 3 cut(s) | 2844, 4002, 4096 |
| MroI | TCCGGA | 1 cut(s) | 2493 |
| MroXI | GAANNNNTTC | 6 cut(s) | 1233, 1332, 2970, 3066, 3094, 4028 |
| MslI | CAYNNNNRTG | 4 cut(s) | 122, 486, 2393, 4180 |
| MspA1I | CMGCKG | 2 cut(s) | 2805, 3553 |
| MspI | CCGG | 4 cut(s) | 138, 2494, 3115, 3140 |
| MunI | CAATTG | 2 cut(s) | 1065, 3762 |
| Mva1269I | GAATGC | 2 cut(s) | 92, 464 |
| MvnI | CGCG | 2 cut(s) | 266, 732 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 98, 920, 2535, 2644, 3430, 3689, 3698, 4100 |
| NciI | CCSGG | 2 cut(s) | 3116, 3141 |
| NcoI | CCATGG | 1 cut(s) | 4019 |
| NdeI | CATATG | 2 cut(s) | 487, 3400 |
| NheI | GCTAGC | 1 cut(s) | 3023 |
| NlaIV | GGNNCC | 7 cut(s) | 12, 40, 231, 1154, 1715, 2344, 3423 |
| NmeAIII | GCCGAG | 1 cut(s) | 1510 |
| NmuCI | GTSAC | 4 cut(s) | 2386, 2787, 3627, 4078 |
| NsiI | ATGCAT | 3 cut(s) | 2844, 4002, 4096 |
| NspI | RCATGY | 9 cut(s) | 666, 762, 1848, 2191, 2705, 2905, 3526, 4094, 4137 |
| NspV | TTCGAA | 1 cut(s) | 3992 |
| OliI | CACNNNNGTG | 2 cut(s) | 122, 2393 |
| PaeI | GCATGC | 3 cut(s) | 1848, 2905, 4094 |
| PagI | TCATGA | 2 cut(s) | 3058, 3357 |
| PaqCI | CACCTGC | 1 cut(s) | 2197 |
| PasI | CCCWGGG | 1 cut(s) | 2339 |
| PceI | AGGCCT | 1 cut(s) | 3066 |
| PciI | ACATGT | 1 cut(s) | 662 |
| PctI | GAATGC | 2 cut(s) | 92, 464 |
| PdmI | GAANNNNTTC | 6 cut(s) | 1233, 1332, 2970, 3066, 3094, 4028 |
| PflFI | GACNNNGTC | 1 cut(s) | 3207 |
| PfoI | TCCNGGA | 2 cut(s) | 1209, 3619 |
| PleI | GAGTC | 5 cut(s) | 326, 376, 1582, 1684, 3859 |
| PpsI | GAGTC | 5 cut(s) | 326, 376, 1582, 1684, 3859 |
| Ppu21I | YACGTR | 1 cut(s) | 2623 |
| PpuMI | RGGWCCY | 1 cut(s) | 4152 |
| PscI | ACATGT | 1 cut(s) | 662 |
| PshBI | ATTAAT | 1 cut(s) | 1496 |
| Psp1406I | AACGTT | 1 cut(s) | 3448 |
| Psp5II | RGGWCCY | 1 cut(s) | 4152 |
| PspEI | GGTNACC | 1 cut(s) | 476 |
| PspFI | CCCAGC | 1 cut(s) | 3804 |
| PspN4I | GGNNCC | 7 cut(s) | 12, 40, 231, 1154, 1715, 2344, 3423 |
| PspPI | GGNCC | 6 cut(s) | 820, 930, 1153, 2343, 3203, 4152 |
| PspPPI | RGGWCCY | 1 cut(s) | 4152 |
| PstI | CTGCAG | 1 cut(s) | 2583 |
| PsuI | RGATCY | 1 cut(s) | 3534 |
| PsyI | GACNNNGTC | 1 cut(s) | 3207 |
| PvuII | CAGCTG | 1 cut(s) | 2805 |
| RseI | CAYNNNNRTG | 4 cut(s) | 122, 486, 2393, 4180 |
| SalI | GTCGAC | 2 cut(s) | 320, 805 |
| Sau96I | GGNCC | 6 cut(s) | 820, 930, 1153, 2343, 3203, 4152 |
| ScaI | AGTACT | 1 cut(s) | 2618 |
| SchI | GAGTC | 5 cut(s) | 327, 376, 1583, 1685, 3860 |
| SduI | GDGCHC | 2 cut(s) | 2640, 3933 |
| SfcI | CTRYAG | 5 cut(s) | 1600, 1639, 2218, 2579, 3786 |
| SfuI | TTCGAA | 1 cut(s) | 3992 |
| SinI | GGWCC | 5 cut(s) | 820, 930, 2343, 3203, 4152 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 122, 486, 2393, 4180 |
| SmlI | CTYRAG | 2 cut(s) | 632, 4147 |
| SmoI | CTYRAG | 2 cut(s) | 632, 4147 |
| SnaBI | TACGTA | 1 cut(s) | 2623 |
| SphI | GCATGC | 3 cut(s) | 1848, 2905, 4094 |
| SseBI | AGGCCT | 1 cut(s) | 3066 |
| SsiI | CCGC | 5 cut(s) | 112, 732, 1765, 2715, 3553 |
| SspI | AATATT | 4 cut(s) | 393, 555, 3898, 3986 |
| SspMI | CTAG | 8 cut(s) | 974, 1458, 1470, 2013, 2987, 3024, 3494, 3857 |
| StuI | AGGCCT | 1 cut(s) | 3066 |
| StyI | CCWWGG | 4 cut(s) | 1745, 2502, 3828, 4019 |
| TaaI | ACNGT | 9 cut(s) | 1283, 1438, 1455, 2114, 2164, 2219, 2471, 2661, 2772 |
| TaiI | ACGT | 3 cut(s) | 2410, 2625, 3451 |
| TaqI | TCGA | 7 cut(s) | 96, 321, 806, 1370, 1647, 3849, 3992 |
| TatI | WGTACW | 7 cut(s) | 1695, 2350, 2455, 2616, 2857, 3351, 3606 |
| TseFI | GTSAC | 4 cut(s) | 2386, 2787, 3627, 4078 |
| Tsp45I | GTSAC | 4 cut(s) | 2386, 2787, 3627, 4078 |
| TspGWI | ACGGA | 4 cut(s) | 51, 185, 1904, 3467 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3207 |
| VpaK11BI | GGWCC | 5 cut(s) | 820, 930, 2343, 3203, 4152 |
| VspI | ATTAAT | 1 cut(s) | 1496 |
| XbaI | TCTAGA | 1 cut(s) | 1457 |
| XceI | RCATGY | 9 cut(s) | 666, 762, 1848, 2191, 2705, 2905, 3526, 4094, 4137 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 127, 470, 2932 |
| XmiI | GTMKAC | 4 cut(s) | 321, 659, 755, 806 |
| XmnI | GAANNNNTTC | 6 cut(s) | 1233, 1332, 2970, 3066, 3094, 4028 |
| XspI | CTAG | 8 cut(s) | 974, 1458, 1470, 2013, 2987, 3024, 3494, 3857 |
| ZrmI | AGTACT | 1 cut(s) | 2618 |
| Zsp2I | ATGCAT | 3 cut(s) | 2844, 4002, 4096 |