RLG00000025669

aldo-keto reductase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
47488772 .. 47491819
3048 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025669

Sequence Viewer

Length: 633 bp
ATGAAATTCTTGTTGGCAAGGACCTTCTCGTTTGGTTGTAAACGGACTCCGGAGTATGTCCTGTCGAGTTGCGAGGCTAGCTTGAAGCGTCTTGGAGTCGACTACATTGATCTGTACTATCATTACCGCATTGACCAAACAGTGCCGATAGAGGAAACTGAAAGATCCGGGTTATCTGAAGCCAGTCCTGACACAATAAGGAGAGTACGTGCAGTTCATCCCATCACAGCTGTACAAATGGAGTGGTCACTATGGACTCGTGATATTGAAGAAGAGATTATTCCACTTTGCAGGGAGCGTGGCATCGGAATTGTTCCATATTGTCCTCTTGGTTGTGGTTTTTTCGCAGGCAAAGCAGTTGTCGAAAGTTTGGATCCAAATGTTCCTGCTGCCGCACATCCTTGGCTCACTGGAGAGAACTTGGAGAAGAACAGATACATATACCACGCAACAGAAAGAGTTGCTACAAAGCGCCATTGCTCTCCTGCTCAACTAGCACTGTCGTGGGAAGACGACCTCAAAGAAATCTCTGATGCTGTTCCACTCGACCAAGTAGTTGGTGATAGGAGTTTTGAAAGCATAAGTCGTGTGCAATGGAAATTCGCCAACACTCCTCCAAAGACTCTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

211

Amino Acids

23.89

Weight (kDa)

5.78

Isoelectric Point (pI)

50.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 16 - 169 1.2e-24 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000149)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01550 FvH4_4g01550 FvH4_4g01550 FvH4_6g03001 FvH4_6g03010 FvH4_6g03030 FvH4_6g03050 FvH4_6g03050 FvH4_6g03050 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03052 FvH4_6g03070 FvH4_6g03070 FvH4_6g03110
malus_domestica MD04G1223200.v1.1 MD08G1240600.v1.1 MD12G1239000.v1.1 MD12G1239100.v1.1 MD12G1239200.v1.1 MD12G1239300.v1.1 MD12G1239400.v1.1 MD12G1239600.v1.1 MD12G1239800.v1.1 MD12G1240000.v1.1 MD12G1240300.v1.1 MD12G1240400.v1.1 MD13G1200700.v1.1
prunus_persica Prupe.1G021900_v2.0.a1 Prupe.1G022000_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G341900_v2.0.a1 Prupe.6G342100_v2.0.a1 Prupe.6G342200_v2.0.a1 Prupe.6G342300_v2.0.a1
pyrus_communis pycom04g19710 pycom12g21970 pycom12g21980 pycom12g21990 pycom12g22000 pycom12g22020 pycom13g17420 pycom16g16880
rosa_chinensis RchiOBHm_Chr3g0450451 RchiOBHm_Chr3g0451211 RchiOBHm_Chr3g0451221 RchiOBHm_Chr3g0451251 RchiOBHm_Chr3g0451261 RchiOBHm_Chr3g0451281 RchiOBHm_Chr3g0451321 RchiOBHm_Chr3g0451331 RchiOBHm_Chr3g0451341 RchiOBHm_Chr3g0454931 RchiOBHm_Chr4g0387811 RchiOBHm_Chr4g0387821 RchiOBHm_Chr4g0388101
rosa_laevigata RLG00000010080 RLG00000010092 RLG00000010093 RLG00000025402 RLG00000025666 RLG00000025667 RLG00000025668 RLG00000025669 RLG00000025672 RLG00000025673 RLG00000025674 RLG00000025675 RLG00000025676 RLG00000025678 RLG00000025679 RLG00000025729
rosa_multiflora Rmu_co8283913.1_g000001 Rmu_co8296899.1_g000001 Rmu_sc0000330.1_g000014 Rmu_sc0001792.1_g000004 Rmu_sc0002169.1_g000002 Rmu_sc0002180.1_g000028 Rmu_sc0002509.1_g000009 Rmu_sc0002575.1_g000011 Rmu_sc0002575.1_g000013 Rmu_sc0002575.1_g000015 Rmu_sc0002575.1_g000019 Rmu_sc0002575.1_g000021 Rmu_sc0002575.1_g000022 Rmu_sc0012229.1_g000010 Rmu_sc0012229.1_g000014 Rmu_sc0012229.1_g000017 Rmu_sc0012229.1_g000018 Rmu_sc0013958.1_g000001 Rmu_sc0030279.1_g000001 Rmu_sc0031850.1_g000002
rosa_roxburghii Rroxscaffold_163G00450840 Rroxscaffold_163G00450860 Rroxscaffold_163G00450870 Rroxscaffold_164G00436570 Rroxscaffold_5G00334430 Rroxscaffold_5G00334440 Rroxscaffold_5G00334650 Rroxscaffold_6G00428150 Rroxscaffold_6G00428660 Rroxscaffold_6G00428680 Rroxscaffold_6G00428710 Rroxscaffold_6G00428720 Rroxscaffold_6G00428730 Rroxscaffold_6G00428740 Rroxscaffold_6G00428750 Rroxscaffold_6G00428760
rosa_rugosa Rorug02G0535300 Rorug02G0627900 Rorug02G0632500 Rorug02G0632600 Rorug02G0633000 Rorug02G0633100 Rorug03G0003000 Rorug03G0313700 Rorug03G0314800 Rorug05G0229300 Rorug07G0155500
rosa_samantha Rh3AG028500 Rh3AG035300 Rh3AG035400 Rh3AG035500 Rh3AG035600 Rh3AG035700 Rh3AG035800 Rh3AG035900 Rh3AG062900 Rh3BG029000 Rh3BG035500 Rh3BG035600 Rh3BG035800 Rh3BG035900 Rh3BG036000 Rh3BG036100 Rh3BG036200 Rh3BG036300 Rh3BG036400 Rh3BG036500 Rh3BG036600 Rh3BG064800 Rh3CG027800 Rh3CG034200 Rh3CG034400 Rh3CG034500 Rh3CG034600 Rh3CG034700 Rh3CG034800 Rh3CG034900 Rh3CG063700 Rh3DG035100 Rh3DG035200 Rh3DG035400 Rh3DG035500 Rh3DG035600 Rh3DG035700 Rh3DG035800 Rh3DG035900 Rh3DG036000 Rh3DG036100 Rh3DG064800 Rh4AG018700 Rh4BG013600 Rh4BG013700 Rh4BG014900 Rh4CG021200 Rh4DG015600
rosa_wichuraiana Rw0G001850 Rw3G002200 Rw3G002580 Rw3G002590 Rw3G002610 Rw3G002620 Rw3G002630 Rw3G002640 Rw3G002650 Rw3G002660 Rw3G004920 Rw3G016120 Rw4G001220 Rw4G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 99
AccIII TCCGGA 1 cut(s) 49
AciI CCGC 2 cut(s) 127, 393
AclWI GGATC 3 cut(s) 159, 368, 381
AcsI RAATTY 2 cut(s) 5, 599
AcuI CTGAAG 1 cut(s) 198
AfaI GTAC 3 cut(s) 116, 207, 234
AgsI TTSAA 3 cut(s) 85, 269, 575
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AleI CACNNNNGTG 1 cut(s) 502
AluBI AGCT 2 cut(s) 81, 230
AluI AGCT 2 cut(s) 81, 230
AlwI GGATC 3 cut(s) 159, 368, 381
Aor13HI TCCGGA 1 cut(s) 49
ApeKI GCWGC 1 cut(s) 389
ApoI RAATTY 2 cut(s) 5, 599
ArsI GACNNNNNNTTYG 2 cut(s) 345, 377
AspLEI GCGC 1 cut(s) 474
AspS9I GGNCC 1 cut(s) 21
AsuC2I CCSGG 1 cut(s) 169
AsuHPI GGTGA 1 cut(s) 572
AsuNHI GCTAGC 1 cut(s) 77
AvaII GGWCC 1 cut(s) 21
BamHI GGATCC 1 cut(s) 373
BarI GAAGNNNNNNTAC 2 cut(s) 419, 451
BauI CACGAG 1 cut(s) 258
BbsI GAAGAC 1 cut(s) 516
BbvI GCAGC 1 cut(s) 376
BccI CCATC 1 cut(s) 230
BcnI CCSGG 1 cut(s) 169
BfaI CTAG 2 cut(s) 78, 494
BfoI RGCGCY 1 cut(s) 475
BisI GCNGC 2 cut(s) 390, 393
BlsI GCNGC 2 cut(s) 391, 394
Bme1390I CCNGG 1 cut(s) 169
Bme18I GGWCC 1 cut(s) 21
BmgT120I GGNCC 1 cut(s) 21
BmiI GGNNCC 1 cut(s) 375
BmrFI CCNGG 1 cut(s) 169
BmsI GCATC 2 cut(s) 312, 523
BmtI GCTAGC 1 cut(s) 81
BpiI GAAGAC 1 cut(s) 516
BpmI CTGGAG 1 cut(s) 432
BpuMI CCSGG 1 cut(s) 169
BsaAI YACGTR 1 cut(s) 209
BsaJI CCNNGG 1 cut(s) 401
BsaWI WCCGGW 1 cut(s) 49
BsaXI ACNNNNNCTCC 2 cut(s) 193, 223
Bse1I ACTGG 2 cut(s) 183, 415
Bse3DI GCAATG 2 cut(s) 475, 599
BseAI TCCGGA 1 cut(s) 49
BseDI CCNNGG 1 cut(s) 401
BseGI GGATG 2 cut(s) 217, 397
BseMI GCAATG 2 cut(s) 475, 599
BseNI ACTGG 2 cut(s) 183, 415
BseRI GAGGAG 1 cut(s) 603
BseXI GCAGC 1 cut(s) 376
BsgI GTGCAG 1 cut(s) 231
BsiSI CCGG 2 cut(s) 50, 168
Bsp13I TCCGGA 1 cut(s) 49
Bsp1407I TGTACA 1 cut(s) 232
Bsp143I GATC 3 cut(s) 109, 164, 373
BspACI CCGC 2 cut(s) 127, 393
BspEI TCCGGA 1 cut(s) 49
BspLI GGNNCC 1 cut(s) 375
BspOI GCTAGC 1 cut(s) 81
BspPI GGATC 3 cut(s) 159, 368, 381
BsrDI GCAATG 2 cut(s) 475, 599
BsrGI TGTACA 1 cut(s) 232
BsrI ACTGG 2 cut(s) 183, 415
BssECI CCNNGG 1 cut(s) 401
BssMI GATC 3 cut(s) 109, 164, 373
BssSI CACGAG 1 cut(s) 258
BssT1I CCWWGG 1 cut(s) 401
Bst2BI CACGAG 1 cut(s) 258
Bst4CI ACNGT 2 cut(s) 142, 501
Bst6I CTCTTC 1 cut(s) 267
BstAUI TGTACA 1 cut(s) 232
BstBAI YACGTR 1 cut(s) 209
BstC8I GCNNGC 2 cut(s) 79, 349
BstF5I GGATG 2 cut(s) 217, 397
BstH2I RGCGCY 1 cut(s) 475
BstHHI GCGC 1 cut(s) 474
BstKTI GATC 3 cut(s) 112, 167, 376
BstMBI GATC 3 cut(s) 109, 164, 373
BstMWI GCNNNNNNNGC 3 cut(s) 78, 353, 494
BstSCI CCNGG 1 cut(s) 167
BstV1I GCAGC 1 cut(s) 376
BstV2I GAAGAC 1 cut(s) 516
BstX2I RGATCY 2 cut(s) 164, 373
BstXI CCANNNNNNTGG 1 cut(s) 557
BstYI RGATCY 2 cut(s) 164, 373
BtsCI GGATG 2 cut(s) 217, 397
BtsIMutI CAGTG 3 cut(s) 147, 408, 497
Cac8I GCNNGC 2 cut(s) 79, 349
CfoI GCGC 1 cut(s) 474
Cfr13I GGNCC 1 cut(s) 21
CseI GACGC 1 cut(s) 77
Csp6I GTAC 3 cut(s) 115, 206, 233
CspCI CAANNNNNGTGG 2 cut(s) 224, 259
CviJI RGCY 5 cut(s) 77, 81, 182, 230, 406
CviKI_1 RGCY 5 cut(s) 77, 81, 182, 230, 406
CviQI GTAC 3 cut(s) 115, 206, 233
DpnI GATC 3 cut(s) 111, 166, 375
DpnII GATC 3 cut(s) 109, 164, 373
Eam1104I CTCTTC 1 cut(s) 267
EarI CTCTTC 1 cut(s) 267
Eco130I CCWWGG 1 cut(s) 401
Eco47I GGWCC 1 cut(s) 21
Eco57I CTGAAG 1 cut(s) 198
EcoO109I RGGNCCY 1 cut(s) 21
EcoT14I CCWWGG 1 cut(s) 401
ErhI CCWWGG 1 cut(s) 401
FaiI YATR 6 cut(s) 57, 253, 319, 440, 442, 581
FblI GTMKAC 1 cut(s) 99
Fnu4HI GCNGC 2 cut(s) 390, 393
FokI GGATG 2 cut(s) 204, 384
Fsp4HI GCNGC 2 cut(s) 390, 393
FspBI CTAG 2 cut(s) 78, 494
GlaI GCGC 1 cut(s) 473
GluI GCNGC 2 cut(s) 390, 393
GsuI CTGGAG 1 cut(s) 432
HaeII RGCGCY 1 cut(s) 475
HapII CCGG 2 cut(s) 50, 168
HgaI GACGC 1 cut(s) 77
HhaI GCGC 1 cut(s) 474
Hin6I GCGC 1 cut(s) 472
HinP1I GCGC 1 cut(s) 472
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HinfI GANTC 4 cut(s) 46, 96, 256, 622
HpaII CCGG 2 cut(s) 50, 168
HphI GGTGA 1 cut(s) 572
Hpy166II GTNNAC 2 cut(s) 41, 100
Hpy188I TCNGA 4 cut(s) 178, 308, 532, 627
Hpy188III TCNNGA 3 cut(s) 50, 188, 260
Hpy8I GTNNAC 2 cut(s) 41, 100
HpyAV CCTTC 1 cut(s) 34
HpyCH4III ACNGT 2 cut(s) 142, 501
HpyCH4IV ACGT 1 cut(s) 208
HpyCH4V TGCA 3 cut(s) 212, 291, 592
HpyF10VI GCNNNNNNNGC 3 cut(s) 78, 353, 494
HpySE526I ACGT 1 cut(s) 208
HspAI GCGC 1 cut(s) 472
Kpn2I TCCGGA 1 cut(s) 49
Kzo9I GATC 3 cut(s) 109, 164, 373
LmnI GCTCC 1 cut(s) 295
Lsp1109I GCAGC 1 cut(s) 376
LweI GCATC 2 cut(s) 312, 523
MaeI CTAG 2 cut(s) 78, 494
MaeII ACGT 1 cut(s) 208
MaeIII GTNAC 1 cut(s) 246
MalI GATC 3 cut(s) 111, 166, 375
MboI GATC 3 cut(s) 109, 164, 373
MboII GAAGA 4 cut(s) 281, 284, 439, 521
MflI RGATCY 2 cut(s) 164, 373
MluCI AATT 4 cut(s) 5, 309, 599, 628
MlyI GAGTC 4 cut(s) 40, 105, 250, 616
MnlI CCTC 5 cut(s) 67, 145, 336, 527, 624
MroI TCCGGA 1 cut(s) 49
MslI CAYNNNNRTG 1 cut(s) 502
MspA1I CMGCKG 1 cut(s) 230
MspI CCGG 2 cut(s) 50, 168
MspR9I CCNGG 1 cut(s) 169
MwoI GCNNNNNNNGC 3 cut(s) 78, 353, 494
NciI CCSGG 1 cut(s) 169
NdeII GATC 3 cut(s) 109, 164, 373
NheI GCTAGC 1 cut(s) 77
NlaIV GGNNCC 1 cut(s) 375
NmuCI GTSAC 1 cut(s) 246
OliI CACNNNNGTG 1 cut(s) 502
PkrI GCNGC 2 cut(s) 391, 394
PleI GAGTC 4 cut(s) 40, 104, 250, 616
PpsI GAGTC 4 cut(s) 40, 104, 250, 616
Ppu21I YACGTR 1 cut(s) 209
PpuMI RGGWCCY 1 cut(s) 21
Psp5II RGGWCCY 1 cut(s) 21
PspN4I GGNNCC 1 cut(s) 375
PspPI GGNCC 1 cut(s) 21
PspPPI RGGWCCY 1 cut(s) 21
PsrI GAACNNNNNNTAC 2 cut(s) 198, 230
PsuI RGATCY 2 cut(s) 164, 373
PvuII CAGCTG 1 cut(s) 230
RsaI GTAC 3 cut(s) 116, 207, 234
RsaNI GTAC 3 cut(s) 115, 206, 233
RseI CAYNNNNRTG 1 cut(s) 502
SalI GTCGAC 1 cut(s) 98
SatI GCNGC 2 cut(s) 390, 393
Sau3AI GATC 3 cut(s) 109, 164, 373
Sau96I GGNCC 1 cut(s) 21
SchI GAGTC 4 cut(s) 40, 105, 250, 616
ScrFI CCNGG 1 cut(s) 169
SetI ASST 5 cut(s) 26, 83, 211, 232, 519
SfaNI GCATC 2 cut(s) 312, 523
SinI GGWCC 1 cut(s) 21
SmiMI CAYNNNNRTG 1 cut(s) 502
Sse9I AATT 4 cut(s) 5, 309, 599, 628
SsiI CCGC 2 cut(s) 127, 393
SspMI CTAG 2 cut(s) 78, 494
StyD4I CCNGG 1 cut(s) 167
StyI CCWWGG 1 cut(s) 401
TaaI ACNGT 2 cut(s) 142, 501
TaiI ACGT 1 cut(s) 211
TaqI TCGA 4 cut(s) 65, 99, 363, 546
TasI AATT 4 cut(s) 5, 309, 599, 628
TatI WGTACW 2 cut(s) 114, 232
TauI GCSGC 1 cut(s) 395
TscAI CASTG 3 cut(s) 147, 415, 504
TseFI GTSAC 1 cut(s) 246
TseI GCWGC 1 cut(s) 389
Tsp45I GTSAC 1 cut(s) 246
TspDTI ATGAA 2 cut(s) 17, 206
TspGWI ACGGA 1 cut(s) 58
TspRI CASTG 3 cut(s) 147, 415, 504
VpaK11BI GGWCC 1 cut(s) 21
XapI RAATTY 2 cut(s) 5, 599
XmiI GTMKAC 1 cut(s) 99
XspI CTAG 2 cut(s) 78, 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.