Rorug02G0627900

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000149
Physical Location & Seq
Forward (+)
74299953 .. 74303184
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0627900.1

Sequence Viewer

Length: 1518 bp
ATGGCTAAACCAGTCTCTCTGTCTCTTCTGTTCCTTCGCCCCGCCACACTCTCCCGCCTTCTCCCACACCCACCAACCCTCACCCGCACCAGAACCAACCCCCTTCTCTCCTCCCATACGCCGTCGTTTTCAACCACCTCCACTCCATTCCCACTCCAGTACGACCTCATCATCAACCGCCCCACCCAGTCCTCGCTCGACCGCCGTCCCCGCCTCCCCTCTCGCGCCGCCAAACCCGACTCATCCGGGTCGGAGTCCGATTCCCCCGAAAAGCCCAACGAATTGGGGTTCGACAACTGGCTGGACCAGAAGCTCGATCCGATGGAGAAGAAGAAGAGGAAGTATTATAACAAGCGGAGGAAGCGGATGTACGGCAGCGATTCGGAGGAGGAGGAGGAGAAGCGGCGGGATGAGGAGAGGCTGGTGGAGCTGAAGCCGGAGGTGGTGGAGTTCAACACGTTGCATAAGAGAGAGGAGGAGCTCTACTTCTACGATACGTTTGCGTATCCATGGGAGAAGGACAAGCATTACAAGATGGTGTACCAGCTGGAGAAGAAGTACTATCCCGACCAGTGTCTGGACAAAGCGTTTCTCGAACCCGGTGCAACGAATTGCAATCTGAGTAGGAAGAAGAAAGAGCGTGATGATGATGATAAGGGAATGGTGTTTTTCGAGGGGAAGGGGGAGGGAGAATCGAGAGAACCGGCTGCTGCGACGAAGGATGTTGCAGAGAAGAAGGTGGAGGAGTTTTTCAAGTGTTTGAAGAAAGTGCCGAATGAAGAAGTTAGTAATGAGGGGGAGCCGTATCTGTTGACAAGGAGTAGCGAGCTTCCTCCGAGGTGGGACGGGCCGTATGGGACTGTGGTTTTGGTGAACAAACCGAAAGGGTGGACCTCTTTTACAGTTTGTGGAAAGCTGCGGCGACTAGTCAAAGTGAAGAAGGTAGGGCATGCTGGTACGCTTGATCCGATGGCAACTGGTTTGTTAATTGTATGTGTTGGTAAAGCTACTAAGGTTGTGGACAGCTATCAAGGTATGACCAAGGGTTATAGTGGAGTTTTCCGTCTGGGGGAGGCTACTTCAACTTGGGATGCTGATTCACCGGTCATTCAGCGTGAGCCGTGGGAGCATATCAAAGATGAAGATATAAAGAAAACTGCTGCATCCTTTTGTGGAGAGATCTGGCAAGTACCTCCAATGTTTTCTGCCATCAAAGTTGGAGGTGAAAAGATGTATGAGAAGGCAAGAAGAGGAGAAAGCATTGAGCTCTCACCCAGACGGATATCAATCTATCAGTTTGACATTGAGCGCAGCTTAGATGACAGACAAAATTTGATTTTCCGGGTTACTTGCTCTAAAGGGACATATATTAGGTCTCTATGTGCAGATTTGGGGAAAGCTCTCGGCAGTTGTGCTCATTTAACTGCTCTTCGGAGAGATTCAATTGGGGAATATTCTGCAGATAATGCATGGGACTTCAAAGAGCTGGAAGATGCAATTACCAAAACATATTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

505

Amino Acids

57.88

Weight (kDa)

8.58

Isoelectric Point (pI)

52.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TruB_N PF01509 307 - 457 1.9e-53 TruB family pseudouridylate synthase (N terminal domain)
TruB_C_2 PF16198 458 - 501 2.1e-09 tRNA pseudouridylate synthase B C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000149)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01550 FvH4_4g01550 FvH4_4g01550 FvH4_6g03001 FvH4_6g03010 FvH4_6g03030 FvH4_6g03050 FvH4_6g03050 FvH4_6g03050 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03052 FvH4_6g03070 FvH4_6g03070 FvH4_6g03110
malus_domestica MD04G1223200.v1.1 MD08G1240600.v1.1 MD12G1239000.v1.1 MD12G1239100.v1.1 MD12G1239200.v1.1 MD12G1239300.v1.1 MD12G1239400.v1.1 MD12G1239600.v1.1 MD12G1239800.v1.1 MD12G1240000.v1.1 MD12G1240300.v1.1 MD12G1240400.v1.1 MD13G1200700.v1.1
prunus_persica Prupe.1G021900_v2.0.a1 Prupe.1G022000_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G341900_v2.0.a1 Prupe.6G342100_v2.0.a1 Prupe.6G342200_v2.0.a1 Prupe.6G342300_v2.0.a1
pyrus_communis pycom04g19710 pycom12g21970 pycom12g21980 pycom12g21990 pycom12g22000 pycom12g22020 pycom13g17420 pycom16g16880
rosa_chinensis RchiOBHm_Chr3g0450451 RchiOBHm_Chr3g0451211 RchiOBHm_Chr3g0451221 RchiOBHm_Chr3g0451251 RchiOBHm_Chr3g0451261 RchiOBHm_Chr3g0451281 RchiOBHm_Chr3g0451321 RchiOBHm_Chr3g0451331 RchiOBHm_Chr3g0451341 RchiOBHm_Chr3g0454931 RchiOBHm_Chr4g0387811 RchiOBHm_Chr4g0387821 RchiOBHm_Chr4g0388101
rosa_laevigata RLG00000010080 RLG00000010092 RLG00000010093 RLG00000025402 RLG00000025666 RLG00000025667 RLG00000025668 RLG00000025669 RLG00000025672 RLG00000025673 RLG00000025674 RLG00000025675 RLG00000025676 RLG00000025678 RLG00000025679 RLG00000025729
rosa_multiflora Rmu_co8283913.1_g000001 Rmu_co8296899.1_g000001 Rmu_sc0000330.1_g000014 Rmu_sc0001792.1_g000004 Rmu_sc0002169.1_g000002 Rmu_sc0002180.1_g000028 Rmu_sc0002509.1_g000009 Rmu_sc0002575.1_g000011 Rmu_sc0002575.1_g000013 Rmu_sc0002575.1_g000015 Rmu_sc0002575.1_g000019 Rmu_sc0002575.1_g000021 Rmu_sc0002575.1_g000022 Rmu_sc0012229.1_g000010 Rmu_sc0012229.1_g000014 Rmu_sc0012229.1_g000017 Rmu_sc0012229.1_g000018 Rmu_sc0013958.1_g000001 Rmu_sc0030279.1_g000001 Rmu_sc0031850.1_g000002
rosa_roxburghii Rroxscaffold_163G00450840 Rroxscaffold_163G00450860 Rroxscaffold_163G00450870 Rroxscaffold_164G00436570 Rroxscaffold_5G00334430 Rroxscaffold_5G00334440 Rroxscaffold_5G00334650 Rroxscaffold_6G00428150 Rroxscaffold_6G00428660 Rroxscaffold_6G00428680 Rroxscaffold_6G00428710 Rroxscaffold_6G00428720 Rroxscaffold_6G00428730 Rroxscaffold_6G00428740 Rroxscaffold_6G00428750 Rroxscaffold_6G00428760
rosa_rugosa Rorug02G0535300 Rorug02G0627900 Rorug02G0632500 Rorug02G0632600 Rorug02G0633000 Rorug02G0633100 Rorug03G0003000 Rorug03G0313700 Rorug03G0314800 Rorug05G0229300 Rorug07G0155500
rosa_samantha Rh3AG028500 Rh3AG035300 Rh3AG035400 Rh3AG035500 Rh3AG035600 Rh3AG035700 Rh3AG035800 Rh3AG035900 Rh3AG062900 Rh3BG029000 Rh3BG035500 Rh3BG035600 Rh3BG035800 Rh3BG035900 Rh3BG036000 Rh3BG036100 Rh3BG036200 Rh3BG036300 Rh3BG036400 Rh3BG036500 Rh3BG036600 Rh3BG064800 Rh3CG027800 Rh3CG034200 Rh3CG034400 Rh3CG034500 Rh3CG034600 Rh3CG034700 Rh3CG034800 Rh3CG034900 Rh3CG063700 Rh3DG035100 Rh3DG035200 Rh3DG035400 Rh3DG035500 Rh3DG035600 Rh3DG035700 Rh3DG035800 Rh3DG035900 Rh3DG036000 Rh3DG036100 Rh3DG064800 Rh4AG018700 Rh4BG013600 Rh4BG013700 Rh4BG014900 Rh4CG021200 Rh4DG015600
rosa_wichuraiana Rw0G001850 Rw3G002200 Rw3G002580 Rw3G002590 Rw3G002610 Rw3G002620 Rw3G002630 Rw3G002640 Rw3G002650 Rw3G002660 Rw3G004920 Rw3G016120 Rw4G001220 Rw4G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 348
AccB7I CCANNNNNTGG 1 cut(s) 577
AccII CGCG 1 cut(s) 225
AclWI GGATC 2 cut(s) 311, 959
AcsI RAATTY 1 cut(s) 1330
AcuI CTGAAG 1 cut(s) 452
AfaI GTAC 6 cut(s) 161, 371, 542, 560, 958, 1191
AfiI CCNNNNNNNGG 2 cut(s) 577, 1069
AflIII ACRYGT 1 cut(s) 456
AgeI ACCGGT 1 cut(s) 1102
AgsI TTSAA 7 cut(s) 132, 454, 754, 763, 1083, 1443, 1480
AhlI ACTAGT 1 cut(s) 925
AjuI GAANNNNNNNTTGG 1 cut(s) 1496
Alw21I GWGCWC 3 cut(s) 483, 1269, 1417
Alw26I GTCTC 3 cut(s) 19, 27, 1380
AlwI GGATC 2 cut(s) 311, 959
AlwNI CAGNNNCTG 1 cut(s) 577
AoxI GGCC 1 cut(s) 848
ApeKI GCWGC 6 cut(s) 375, 707, 710, 916, 1160, 1311
ApoI RAATTY 1 cut(s) 1330
ArsI GACNNNNNNTTYG 2 cut(s) 850, 882
AsiGI ACCGGT 1 cut(s) 1102
AspLEI GCGC 2 cut(s) 227, 1311
AspS9I GGNCC 3 cut(s) 304, 848, 891
AsuC2I CCSGG 3 cut(s) 247, 600, 1343
AsuHPI GGTGA 5 cut(s) 73, 883, 1092, 1235, 1263
AvaII GGWCC 2 cut(s) 304, 891
BanII GRGCYC 2 cut(s) 483, 1269
BarI GAAGNNNNNNTAC 2 cut(s) 353, 385
Bbv12I GWGCWC 3 cut(s) 483, 1269, 1417
BbvI GCAGC 6 cut(s) 387, 694, 697, 903, 1147, 1323
BccI CCATC 4 cut(s) 316, 529, 964, 1217
BceAI ACGGC 6 cut(s) 106, 189, 388, 787, 835, 1105
BcgI CGANNNNNNTGC 4 cut(s) 482, 516, 584, 618
BciVI GTATCC 1 cut(s) 516
BcnI CCSGG 3 cut(s) 247, 600, 1343
BcoDI GTCTC 3 cut(s) 19, 27, 1380
BcuI ACTAGT 1 cut(s) 925
BfaI CTAG 2 cut(s) 926, 1516
BfmI CTRYAG 1 cut(s) 1458
BfuI GTATCC 1 cut(s) 516
BglII AGATCT 1 cut(s) 1179
BisI GCNGC 9 cut(s) 228, 376, 404, 708, 711, 917, 920, 1161, 1312
BlsI GCNGC 9 cut(s) 229, 377, 405, 709, 712, 918, 921, 1162, 1313
BmcAI AGTACT 1 cut(s) 560
Bme1390I CCNGG 3 cut(s) 247, 600, 1343
Bme18I GGWCC 2 cut(s) 304, 891
BmgT120I GGNCC 3 cut(s) 304, 848, 891
BmiI GGNNCC 1 cut(s) 801
BmrFI CCNGG 3 cut(s) 247, 600, 1343
BmrI ACTGGG 1 cut(s) 181
BmsI GCATC 3 cut(s) 1081, 1172, 1483
BmuI ACTGGG 1 cut(s) 181
BoxI GACNNNNGTC 2 cut(s) 204, 573
BpmI CTGGAG 2 cut(s) 140, 569
BpuMI CCSGG 3 cut(s) 247, 600, 1343
BsaBI GATNNNNATC 1 cut(s) 1286
BsaI GGTCTC 1 cut(s) 1380
BsaJI CCNNGG 4 cut(s) 509, 836, 1041, 1121
BsaWI WCCGGW 1 cut(s) 1102
BsaXI ACNNNNNCTCC 4 cut(s) 127, 157, 542, 572
Bsc4I CCNNNNNNNGG 2 cut(s) 577, 1069
Bse118I RCCGGY 2 cut(s) 703, 1102
Bse1I ACTGG 6 cut(s) 11, 157, 187, 302, 571, 982
Bse8I GATNNNNATC 1 cut(s) 1286
BseDI CCNNGG 4 cut(s) 509, 836, 1041, 1121
BseGI GGATG 6 cut(s) 242, 372, 415, 727, 1096, 1163
BseJI GATNNNNATC 1 cut(s) 1286
BseLI CCNNNNNNNGG 2 cut(s) 577, 1069
BseMII CTCAG 1 cut(s) 611
BseNI ACTGG 6 cut(s) 11, 157, 187, 302, 571, 982
BseXI GCAGC 6 cut(s) 387, 694, 697, 903, 1147, 1323
BsgI GTGCAG 1 cut(s) 1404
Bsh1236I CGCG 1 cut(s) 225
Bsh1285I CGRYCG 1 cut(s) 202
BshFI GGCC 1 cut(s) 850
BshTI ACCGGT 1 cut(s) 1102
BsiEI CGRYCG 1 cut(s) 202
BsiHKAI GWGCWC 3 cut(s) 483, 1269, 1417
BsiSI CCGG 6 cut(s) 246, 437, 600, 704, 1103, 1342
BslFI GGGAC 5 cut(s) 192, 857, 871, 1375, 1487
BslI CCNNNNNNNGG 2 cut(s) 577, 1069
BsmAI GTCTC 3 cut(s) 19, 27, 1380
BsmFI GGGAC 5 cut(s) 192, 857, 871, 1375, 1487
BsnI GGCC 1 cut(s) 850
Bso31I GGTCTC 1 cut(s) 1380
Bsp1286I GDGCHC 3 cut(s) 483, 1269, 1417
Bsp143I GATC 3 cut(s) 316, 964, 1179
Bsp19I CCATGG 1 cut(s) 509
BspANI GGCC 1 cut(s) 850
BspCNI CTCAG 1 cut(s) 612
BspFNI CGCG 1 cut(s) 225
BspLI GGNNCC 1 cut(s) 801
BspMAI CTGCAG 1 cut(s) 1462
BspPI GGATC 2 cut(s) 311, 959
BspQI GCTCTTC 1 cut(s) 1434
BspTNI GGTCTC 1 cut(s) 1380
BsrFI RCCGGY 2 cut(s) 703, 1102
BsrI ACTGG 6 cut(s) 11, 157, 187, 302, 571, 982
BssAI RCCGGY 2 cut(s) 703, 1102
BssECI CCNNGG 4 cut(s) 509, 836, 1041, 1121
BssMI GATC 3 cut(s) 316, 964, 1179
BssT1I CCWWGG 2 cut(s) 509, 1041
Bst4CI ACNGT 2 cut(s) 862, 904
Bst6I CTCTTC 4 cut(s) 30, 329, 1243, 1434
BstAPI GCANNNNNTGC 1 cut(s) 1466
BstC8I GCNNGC 2 cut(s) 827, 951
BstDEI CTNAG 3 cut(s) 620, 1011, 1315
BstDSI CCRYGG 2 cut(s) 509, 1121
BstF5I GGATG 6 cut(s) 242, 372, 415, 727, 1096, 1163
BstFNI CGCG 1 cut(s) 225
BstHHI GCGC 2 cut(s) 227, 1311
BstKTI GATC 3 cut(s) 319, 967, 1182
BstMAI GTCTC 3 cut(s) 19, 27, 1380
BstMBI GATC 3 cut(s) 316, 964, 1179
BstMCI CGRYCG 1 cut(s) 202
BstMWI GCNNNNNNNGC 5 cut(s) 210, 361, 427, 1126, 1466
BstNSI RCATGY 1 cut(s) 953
BstPAI GACNNNNGTC 2 cut(s) 204, 573
BstSCI CCNGG 3 cut(s) 245, 598, 1341
BstSFI CTRYAG 1 cut(s) 1458
BstUI CGCG 1 cut(s) 225
BstV1I GCAGC 6 cut(s) 387, 694, 697, 903, 1147, 1323
BstX2I RGATCY 1 cut(s) 1179
BstXI CCANNNNNNTGG 1 cut(s) 283
BstYI RGATCY 1 cut(s) 1179
BsuI GTATCC 1 cut(s) 516
BsuRI GGCC 1 cut(s) 850
BtgI CCRYGG 2 cut(s) 509, 1121
BtsCI GGATG 6 cut(s) 242, 372, 415, 727, 1096, 1163
BtsIMutI CAGTG 1 cut(s) 578
Cac8I GCNNGC 2 cut(s) 827, 951
CaiI CAGNNNCTG 1 cut(s) 577
CfoI GCGC 2 cut(s) 227, 1311
Cfr10I RCCGGY 2 cut(s) 703, 1102
Cfr13I GGNCC 3 cut(s) 304, 848, 891
Csp6I GTAC 6 cut(s) 160, 370, 541, 559, 957, 1190
CspAI ACCGGT 1 cut(s) 1102
CviAII CATG 3 cut(s) 510, 950, 1470
CviQI GTAC 6 cut(s) 160, 370, 541, 559, 957, 1190
DdeI CTNAG 3 cut(s) 620, 1011, 1315
DpnI GATC 3 cut(s) 318, 966, 1181
DpnII GATC 3 cut(s) 316, 964, 1179
Eam1104I CTCTTC 4 cut(s) 30, 329, 1243, 1434
EarI CTCTTC 4 cut(s) 30, 329, 1243, 1434
Ecl136II GAGCTC 2 cut(s) 481, 1267
Eco130I CCWWGG 2 cut(s) 509, 1041
Eco24I GRGCYC 2 cut(s) 483, 1269
Eco31I GGTCTC 1 cut(s) 1380
Eco32I GATATC 1 cut(s) 1284
Eco47I GGWCC 2 cut(s) 304, 891
Eco53kI GAGCTC 2 cut(s) 481, 1267
Eco57I CTGAAG 1 cut(s) 452
EcoICRI GAGCTC 2 cut(s) 481, 1267
EcoRV GATATC 1 cut(s) 1284
EcoT14I CCWWGG 2 cut(s) 509, 1041
EcoT22I ATGCAT 1 cut(s) 1471
EcoT38I GRGCYC 2 cut(s) 483, 1269
ErhI CCWWGG 2 cut(s) 509, 1041
FaeI CATG 3 cut(s) 513, 953, 1473
FaqI GGGAC 5 cut(s) 192, 857, 871, 1375, 1487
FatI CATG 3 cut(s) 509, 949, 1469
FauI CCCGC 5 cut(s) 49, 62, 92, 218, 399
Fnu4HI GCNGC 9 cut(s) 228, 376, 404, 708, 711, 917, 920, 1161, 1312
FokI GGATG 6 cut(s) 229, 379, 422, 734, 1103, 1150
FriOI GRGCYC 2 cut(s) 483, 1269
Fsp4HI GCNGC 9 cut(s) 228, 376, 404, 708, 711, 917, 920, 1161, 1312
FspBI CTAG 2 cut(s) 926, 1516
GlaI GCGC 2 cut(s) 226, 1310
GluI GCNGC 9 cut(s) 228, 376, 404, 708, 711, 917, 920, 1161, 1312
GsuI CTGGAG 2 cut(s) 140, 569
HaeIII GGCC 1 cut(s) 850
HapII CCGG 6 cut(s) 246, 437, 600, 704, 1103, 1342
HhaI GCGC 2 cut(s) 227, 1311
Hin1II CATG 3 cut(s) 513, 953, 1473
Hin6I GCGC 2 cut(s) 225, 1309
HinP1I GCGC 2 cut(s) 225, 1309
HincII GTYRAC 1 cut(s) 813
HindII GTYRAC 1 cut(s) 813
HinfI GANTC 7 cut(s) 239, 254, 260, 380, 692, 1097, 1439
HpaII CCGG 6 cut(s) 246, 437, 600, 704, 1103, 1342
HphI GGTGA 5 cut(s) 73, 883, 1092, 1235, 1263
Hpy166II GTNNAC 5 cut(s) 541, 813, 874, 891, 1021
Hpy188I TCNGA 8 cut(s) 253, 259, 321, 385, 621, 837, 969, 1434
Hpy188III TCNNGA 4 cut(s) 566, 578, 593, 696
Hpy8I GTNNAC 5 cut(s) 541, 813, 874, 891, 1021
Hpy99I CGWCG 2 cut(s) 127, 718
HpyAV CCTTC 9 cut(s) 44, 68, 113, 511, 673, 712, 730, 934, 1234
HpyCH4III ACNGT 2 cut(s) 862, 904
HpyCH4IV ACGT 2 cut(s) 458, 497
HpyCH4V TGCA 9 cut(s) 463, 605, 615, 728, 1163, 1385, 1460, 1469, 1496
HpyF10VI GCNNNNNNNGC 5 cut(s) 210, 361, 427, 1126, 1466
HpyF3I CTNAG 3 cut(s) 620, 1011, 1315
HpySE526I ACGT 2 cut(s) 458, 497
Hsp92II CATG 3 cut(s) 513, 953, 1473
HspAI GCGC 2 cut(s) 225, 1309
Kzo9I GATC 3 cut(s) 316, 964, 1179
LguI GCTCTTC 1 cut(s) 1434
LmnI GCTCC 4 cut(s) 427, 478, 799, 1126
Lsp1109I GCAGC 6 cut(s) 387, 694, 697, 903, 1147, 1323
LweI GCATC 3 cut(s) 1081, 1172, 1483
MaeI CTAG 2 cut(s) 926, 1516
MaeII ACGT 2 cut(s) 458, 497
MaeIII GTNAC 1 cut(s) 1345
MalI GATC 3 cut(s) 318, 966, 1181
MboI GATC 3 cut(s) 316, 964, 1179
MfeI CAATTG 1 cut(s) 1443
MflI RGATCY 1 cut(s) 1179
MhlI GDGCHC 3 cut(s) 483, 1269, 1417
MluCI AATT 6 cut(s) 281, 610, 987, 1330, 1443, 1497
MlyI GAGTC 2 cut(s) 233, 263
MmeI TCCRAC 2 cut(s) 231, 1198
Mph1103I ATGCAT 1 cut(s) 1471
MseI TTAA 2 cut(s) 986, 1421
MspA1I CMGCKG 1 cut(s) 547
MspI CCGG 6 cut(s) 246, 437, 600, 704, 1103, 1342
MspR9I CCNGG 3 cut(s) 247, 600, 1343
MunI CAATTG 1 cut(s) 1443
MvnI CGCG 1 cut(s) 225
MwoI GCNNNNNNNGC 5 cut(s) 210, 361, 427, 1126, 1466
NciI CCSGG 3 cut(s) 247, 600, 1343
NcoI CCATGG 1 cut(s) 509
NdeII GATC 3 cut(s) 316, 964, 1179
NlaIII CATG 3 cut(s) 513, 953, 1473
NlaIV GGNNCC 1 cut(s) 801
NmeAIII GCCGAG 1 cut(s) 1383
NsiI ATGCAT 1 cut(s) 1471
NspI RCATGY 1 cut(s) 953
PaeI GCATGC 1 cut(s) 953
PciSI GCTCTTC 1 cut(s) 1434
PcsI WCGNNNNNNNCGW 1 cut(s) 965
PfeI GAWTC 5 cut(s) 260, 380, 692, 1097, 1439
PflMI CCANNNNNTGG 1 cut(s) 577
PinAI ACCGGT 1 cut(s) 1102
PkrI GCNGC 9 cut(s) 229, 377, 405, 709, 712, 918, 921, 1162, 1313
PleI GAGTC 2 cut(s) 233, 262
PpsI GAGTC 2 cut(s) 233, 262
PshAI GACNNNNGTC 2 cut(s) 204, 573
PsiI TTATAA 1 cut(s) 348
Psp124BI GAGCTC 2 cut(s) 483, 1269
PspN4I GGNNCC 1 cut(s) 801
PspPI GGNCC 3 cut(s) 304, 848, 891
PstI CTGCAG 1 cut(s) 1462
PstNI CAGNNNCTG 1 cut(s) 577
PsuI RGATCY 1 cut(s) 1179
PvuII CAGCTG 1 cut(s) 547
RsaI GTAC 6 cut(s) 161, 371, 542, 560, 958, 1191
RsaNI GTAC 6 cut(s) 160, 370, 541, 559, 957, 1190
SacI GAGCTC 2 cut(s) 483, 1269
SapI GCTCTTC 1 cut(s) 1434
SaqAI TTAA 2 cut(s) 986, 1421
SatI GCNGC 9 cut(s) 228, 376, 404, 708, 711, 917, 920, 1161, 1312
Sau3AI GATC 3 cut(s) 316, 964, 1179
Sau96I GGNCC 3 cut(s) 304, 848, 891
ScaI AGTACT 1 cut(s) 560
SchI GAGTC 2 cut(s) 233, 263
ScrFI CCNGG 3 cut(s) 247, 600, 1343
SduI GDGCHC 3 cut(s) 483, 1269, 1417
SfaNI GCATC 3 cut(s) 1081, 1172, 1483
SfcI CTRYAG 1 cut(s) 1458
SinI GGWCC 2 cut(s) 304, 891
SpeI ACTAGT 1 cut(s) 925
SphI GCATGC 1 cut(s) 953
Sse9I AATT 6 cut(s) 281, 610, 987, 1330, 1443, 1497
SspI AATATT 1 cut(s) 1454
SspMI CTAG 2 cut(s) 926, 1516
SstI GAGCTC 2 cut(s) 483, 1269
StyD4I CCNGG 3 cut(s) 245, 598, 1341
StyI CCWWGG 2 cut(s) 509, 1041
TaaI ACNGT 2 cut(s) 862, 904
TaiI ACGT 2 cut(s) 461, 500
TaqI TCGA 6 cut(s) 198, 291, 315, 594, 672, 695
TasI AATT 6 cut(s) 281, 610, 987, 1330, 1443, 1497
TatI WGTACW 1 cut(s) 558
TauI GCSGC 3 cut(s) 230, 406, 922
TfiI GAWTC 5 cut(s) 260, 380, 692, 1097, 1439
Tru1I TTAA 2 cut(s) 986, 1421
Tru9I TTAA 2 cut(s) 986, 1421
TscAI CASTG 1 cut(s) 578
TseI GCWGC 6 cut(s) 375, 707, 710, 916, 1160, 1311
TspDTI ATGAA 2 cut(s) 792, 1155
TspGWI ACGGA 2 cut(s) 1052, 1294
TspRI CASTG 1 cut(s) 578
Van91I CCANNNNNTGG 1 cut(s) 577
VpaK11BI GGWCC 2 cut(s) 304, 891
XapI RAATTY 1 cut(s) 1330
XceI RCATGY 1 cut(s) 953
XspI CTAG 2 cut(s) 926, 1516
ZrmI AGTACT 1 cut(s) 560
Zsp2I ATGCAT 1 cut(s) 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.