Rorug02G0535300

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
66413021 .. 66419684
6664 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0535300.1

Sequence Viewer

Length: 1524 bp
ATGCTTGCAAATTATGTGCCAATCTTTGTGATGCTCCCTCTGGGAGTTGTTACGATTGATAATGCTTTAGAAGACAAAGACACACTCGTGAAGCAGCTGAAGGAACTGAAGAAAGCAGGTGTTGATGGAGTAATGGTAGATGTGTGGTGGGGGATCATAGAATCAAAAGGACCAAAACAATACGACTGGAGTGCTTATAGGAGCATGTTTCAAGCAGTTCAAGAATGTGGACTGAAATTACAAGCTATAATGTCATTTCACCAATGTGGTGGGAATGTTGGAGATATTGTAACCATTCCCATCCCCCAATGGGTACTTGATATCGGAGAATCGAACCCTGATATCTTTTATACCAATCTCAAAGGTAACAGGAACCAGGAGTACCTCACTCTAGGTGTGGATAACTTGCCTCTCTTTAATGGAAGAACTGCTGTTGAGATATATAGTGACTACTTGAAGAGCTTCAGAGAGAACATGTCTGATTTTCTAGAAAGTGGACTAATTATAGACATTGAAGTGGGACTTGGCCCTGCAGGAGAACTCAGGTATCCCTCTTATCCGGAAACTCAAGGATGGGCTTTTCCAGGAATTGGAGAATTTCAGTGTTATGACAAGTATCTCAAAGCAGAGTTTAAAGAGGCTGCAGCAATTGCTGGCCATCCTGAATGGGATTTGCCAGATAACGCAGGAGAATACAATGATACTCCTGAATCTACAGAGTTCTTTAAATCAAACGGGACATACCTTACTGAGAAAGGGAAGTTCTTTTTGACTTGGTACTCTAACAAATTACTGAGCCATGGTGATCAGATCCTGGATGAAGCCAACAAAGTTTTCCTGGGCTGTAAATTAAAGCTAGCAGCAAAAGTCTCCGGAATCCACTGGTGGTATGAAACTGATAATCATGCTGCGGAGCTTACCGCAGGATACTATAACCTGAAGGATAGAGATGGGTACCGACCTATAGCAAGGATGCTGTCAAGGCACCATGCCATTTTGAATTTCACATGTTTAGAGATGAAGAACTCTGAACAAAGTGCCGATGCCAAAAGTGCGCCTCAAGAACTCGTTCAGCAGGTTTTGAGTGGAGGTTGGAGAGAGAACATAGAAGTTGCAGGGGAAAATGCACTTGCAAGGTATGATAGTGCAGCTTATGACCAAATCCTTTTAAATGCTAGACCAAATGGCATCTACAAAGATGGCCAACCAAAATTAAGGATGTATGGGGTGACTTACCTTCGTCTGGTGGATGAACTCCTACAAGAAACGAATTTCAATATATTCAAGACATTTGTAAAGAAGATGCATGCTGATCAGGATTACTGTCAAGACTCAGAGAAGTACAACCACCGCCTAGGTCCCTTGGAACGTTCAAAACCAAAGTTCTCAACTGAAGATCTTCTGGATGCAACAAAACCAGTGGAGCCATTCCCATGGGATAAAGAAACTGATATGAGTGTCACTGGTGGTGGTGGTGATCTACTTTCTTATTTGATAAACAAAGTCTTTTCTCTATTTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

507

Amino Acids

57.43

Weight (kDa)

5.03

Isoelectric Point (pI)

33.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_14 PF01373 9 - 420 2.2e-139 Glycosyl hydrolase family 14
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000149)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01550 FvH4_4g01550 FvH4_4g01550 FvH4_6g03001 FvH4_6g03010 FvH4_6g03030 FvH4_6g03050 FvH4_6g03050 FvH4_6g03050 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03052 FvH4_6g03070 FvH4_6g03070 FvH4_6g03110
malus_domestica MD04G1223200.v1.1 MD08G1240600.v1.1 MD12G1239000.v1.1 MD12G1239100.v1.1 MD12G1239200.v1.1 MD12G1239300.v1.1 MD12G1239400.v1.1 MD12G1239600.v1.1 MD12G1239800.v1.1 MD12G1240000.v1.1 MD12G1240300.v1.1 MD12G1240400.v1.1 MD13G1200700.v1.1
prunus_persica Prupe.1G021900_v2.0.a1 Prupe.1G022000_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G341900_v2.0.a1 Prupe.6G342100_v2.0.a1 Prupe.6G342200_v2.0.a1 Prupe.6G342300_v2.0.a1
pyrus_communis pycom04g19710 pycom12g21970 pycom12g21980 pycom12g21990 pycom12g22000 pycom12g22020 pycom13g17420 pycom16g16880
rosa_chinensis RchiOBHm_Chr3g0450451 RchiOBHm_Chr3g0451211 RchiOBHm_Chr3g0451221 RchiOBHm_Chr3g0451251 RchiOBHm_Chr3g0451261 RchiOBHm_Chr3g0451281 RchiOBHm_Chr3g0451321 RchiOBHm_Chr3g0451331 RchiOBHm_Chr3g0451341 RchiOBHm_Chr3g0454931 RchiOBHm_Chr4g0387811 RchiOBHm_Chr4g0387821 RchiOBHm_Chr4g0388101
rosa_laevigata RLG00000010080 RLG00000010092 RLG00000010093 RLG00000025402 RLG00000025666 RLG00000025667 RLG00000025668 RLG00000025669 RLG00000025672 RLG00000025673 RLG00000025674 RLG00000025675 RLG00000025676 RLG00000025678 RLG00000025679 RLG00000025729
rosa_multiflora Rmu_co8283913.1_g000001 Rmu_co8296899.1_g000001 Rmu_sc0000330.1_g000014 Rmu_sc0001792.1_g000004 Rmu_sc0002169.1_g000002 Rmu_sc0002180.1_g000028 Rmu_sc0002509.1_g000009 Rmu_sc0002575.1_g000011 Rmu_sc0002575.1_g000013 Rmu_sc0002575.1_g000015 Rmu_sc0002575.1_g000019 Rmu_sc0002575.1_g000021 Rmu_sc0002575.1_g000022 Rmu_sc0012229.1_g000010 Rmu_sc0012229.1_g000014 Rmu_sc0012229.1_g000017 Rmu_sc0012229.1_g000018 Rmu_sc0013958.1_g000001 Rmu_sc0030279.1_g000001 Rmu_sc0031850.1_g000002
rosa_roxburghii Rroxscaffold_163G00450840 Rroxscaffold_163G00450860 Rroxscaffold_163G00450870 Rroxscaffold_164G00436570 Rroxscaffold_5G00334430 Rroxscaffold_5G00334440 Rroxscaffold_5G00334650 Rroxscaffold_6G00428150 Rroxscaffold_6G00428660 Rroxscaffold_6G00428680 Rroxscaffold_6G00428710 Rroxscaffold_6G00428720 Rroxscaffold_6G00428730 Rroxscaffold_6G00428740 Rroxscaffold_6G00428750 Rroxscaffold_6G00428760
rosa_rugosa Rorug02G0535300 Rorug02G0627900 Rorug02G0632500 Rorug02G0632600 Rorug02G0633000 Rorug02G0633100 Rorug03G0003000 Rorug03G0313700 Rorug03G0314800 Rorug05G0229300 Rorug07G0155500
rosa_samantha Rh3AG028500 Rh3AG035300 Rh3AG035400 Rh3AG035500 Rh3AG035600 Rh3AG035700 Rh3AG035800 Rh3AG035900 Rh3AG062900 Rh3BG029000 Rh3BG035500 Rh3BG035600 Rh3BG035800 Rh3BG035900 Rh3BG036000 Rh3BG036100 Rh3BG036200 Rh3BG036300 Rh3BG036400 Rh3BG036500 Rh3BG036600 Rh3BG064800 Rh3CG027800 Rh3CG034200 Rh3CG034400 Rh3CG034500 Rh3CG034600 Rh3CG034700 Rh3CG034800 Rh3CG034900 Rh3CG063700 Rh3DG035100 Rh3DG035200 Rh3DG035400 Rh3DG035500 Rh3DG035600 Rh3DG035700 Rh3DG035800 Rh3DG035900 Rh3DG036000 Rh3DG036100 Rh3DG064800 Rh4AG018700 Rh4BG013600 Rh4BG013700 Rh4BG014900 Rh4CG021200 Rh4DG015600
rosa_wichuraiana Rw0G001850 Rw3G002200 Rw3G002580 Rw3G002590 Rw3G002610 Rw3G002620 Rw3G002630 Rw3G002640 Rw3G002650 Rw3G002660 Rw3G004920 Rw3G016120 Rw4G001220 Rw4G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 107
Acc36I ACCTGC 2 cut(s) 107, 1066
Acc65I GGTACC 1 cut(s) 954
AccB1I GGYRCC 2 cut(s) 954, 984
AccB7I CCANNNNNTGG 1 cut(s) 590
AccIII TCCGGA 2 cut(s) 559, 872
AciI CCGC 3 cut(s) 911, 921, 1351
AclI AACGTT 1 cut(s) 1369
AclWI GGATC 2 cut(s) 161, 805
AcoI YGGCCR 2 cut(s) 655, 1201
AcsI RAATTY 3 cut(s) 596, 1000, 1270
AcuI CTGAAG 5 cut(s) 119, 128, 448, 959, 1413
AfaI GTAC 5 cut(s) 315, 383, 779, 956, 1343
AfiI CCNNNNNNNGG 3 cut(s) 310, 590, 1243
AflIII ACRYGT 2 cut(s) 474, 1007
AgsI TTSAA 8 cut(s) 212, 221, 457, 515, 1000, 1276, 1285, 1374
AjnI CCWGG 4 cut(s) 375, 583, 813, 837
AjuI GAANNNNNNNTTGG 4 cut(s) 507, 539, 818, 850
AleI CACNNNNGTG 2 cut(s) 86, 264
AluBI AGCT 6 cut(s) 97, 245, 462, 856, 916, 1151
AluI AGCT 6 cut(s) 97, 245, 462, 856, 916, 1151
Alw26I GTCTC 1 cut(s) 874
AlwI GGATC 2 cut(s) 161, 805
AlwNI CAGNNNCTG 1 cut(s) 814
Aor13HI TCCGGA 2 cut(s) 559, 872
AoxI GGCC 3 cut(s) 526, 655, 1201
ApeKI GCWGC 6 cut(s) 94, 641, 644, 860, 908, 1148
ApoI RAATTY 3 cut(s) 596, 1000, 1270
Asp700I GAANNNNTTC 3 cut(s) 461, 1068, 1398
Asp718I GGTACC 1 cut(s) 954
AspA2I CCTAGG 1 cut(s) 1354
AspLEI GCGC 1 cut(s) 1057
AspS9I GGNCC 3 cut(s) 170, 527, 1358
AsuHPI GGTGA 4 cut(s) 251, 815, 1240, 1487
AsuNHI GCTAGC 1 cut(s) 856
AvaII GGWCC 2 cut(s) 170, 1358
AvrII CCTAGG 1 cut(s) 1354
BaeI ACNNNNGTAYC 2 cut(s) 530, 563
BalI TGGCCA 2 cut(s) 657, 1203
BanI GGYRCC 2 cut(s) 954, 984
BauI CACGAG 1 cut(s) 86
BbsI GAAGAC 1 cut(s) 78
BbvI GCAGC 6 cut(s) 106, 628, 656, 872, 895, 1160
BccI CCATC 6 cut(s) 119, 308, 567, 666, 944, 1193
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 4 cut(s) 377, 585, 815, 839
BciVI GTATCC 2 cut(s) 558, 920
BclI TGATCA 2 cut(s) 805, 1312
BcoDI GTCTC 1 cut(s) 874
BfaI CTAG 5 cut(s) 392, 488, 857, 1176, 1355
BfmI CTRYAG 4 cut(s) 531, 642, 714, 963
BfuAI ACCTGC 2 cut(s) 107, 1066
BfuI GTATCC 2 cut(s) 558, 920
BglII AGATCT 1 cut(s) 1396
BisI GCNGC 6 cut(s) 95, 642, 645, 861, 909, 1149
BlnI CCTAGG 1 cut(s) 1354
BlsI GCNGC 6 cut(s) 96, 643, 646, 862, 910, 1150
Bme1390I CCNGG 4 cut(s) 377, 585, 815, 839
Bme18I GGWCC 2 cut(s) 170, 1358
BmgT120I GGNCC 3 cut(s) 170, 527, 1358
BmiI GGNNCC 5 cut(s) 374, 956, 986, 1360, 1425
BmrFI CCNGG 4 cut(s) 377, 585, 815, 839
BmsI GCATC 6 cut(s) 21, 963, 1033, 1197, 1293, 1396
BmtI GCTAGC 1 cut(s) 860
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 1 cut(s) 208
BpuEI CTTGAG 2 cut(s) 552, 1044
BsaJI CCNNGG 5 cut(s) 799, 838, 1354, 1362, 1433
BsaWI WCCGGW 2 cut(s) 559, 872
BsaXI ACNNNNNCTCC 4 cut(s) 120, 150, 273, 303
Bsc4I CCNNNNNNNGG 3 cut(s) 310, 590, 1243
Bse1I ACTGG 4 cut(s) 191, 887, 1418, 1468
BseAI TCCGGA 2 cut(s) 559, 872
BseBI CCWGG 4 cut(s) 377, 585, 815, 839
BseDI CCNNGG 5 cut(s) 799, 838, 1354, 1362, 1433
BseGI GGATG 8 cut(s) 300, 578, 658, 823, 978, 1224, 1255, 1411
BseLI CCNNNNNNNGG 3 cut(s) 310, 590, 1243
BseMII CTCAG 4 cut(s) 556, 741, 785, 1347
BseNI ACTGG 4 cut(s) 191, 887, 1418, 1468
BseXI GCAGC 6 cut(s) 106, 628, 656, 872, 895, 1160
BsgI GTGCAG 1 cut(s) 1167
BshFI GGCC 3 cut(s) 528, 657, 1203
BshNI GGYRCC 2 cut(s) 954, 984
BsiSI CCGG 2 cut(s) 560, 873
BslFI GGGAC 3 cut(s) 534, 751, 1344
BslI CCNNNNNNNGG 3 cut(s) 310, 590, 1243
BsmAI GTCTC 1 cut(s) 874
BsmFI GGGAC 3 cut(s) 534, 751, 1344
BsnI GGCC 3 cut(s) 528, 657, 1203
Bsp13I TCCGGA 2 cut(s) 559, 872
Bsp143I GATC 6 cut(s) 153, 805, 810, 1312, 1396, 1477
Bsp19I CCATGG 2 cut(s) 799, 1433
BspACI CCGC 3 cut(s) 911, 921, 1351
BspANI GGCC 3 cut(s) 528, 657, 1203
BspCNI CTCAG 4 cut(s) 555, 742, 786, 1346
BspEI TCCGGA 2 cut(s) 559, 872
BspLI GGNNCC 5 cut(s) 374, 956, 986, 1360, 1425
BspMAI CTGCAG 2 cut(s) 535, 646
BspMI ACCTGC 2 cut(s) 107, 1066
BspOI GCTAGC 1 cut(s) 860
BspPI GGATC 2 cut(s) 161, 805
BspQI GCTCTTC 1 cut(s) 452
BspT107I GGYRCC 2 cut(s) 954, 984
BsrI ACTGG 4 cut(s) 191, 887, 1418, 1468
BssECI CCNNGG 5 cut(s) 799, 838, 1354, 1362, 1433
BssMI GATC 6 cut(s) 153, 805, 810, 1312, 1396, 1477
BssSI CACGAG 1 cut(s) 86
BssT1I CCWWGG 4 cut(s) 799, 1354, 1362, 1433
Bst2BI CACGAG 1 cut(s) 86
Bst2UI CCWGG 4 cut(s) 377, 585, 815, 839
Bst4CI ACNGT 1 cut(s) 1325
Bst6I CTCTTC 1 cut(s) 452
BstAPI GCANNNNNTGC 1 cut(s) 650
BstC8I GCNNGC 4 cut(s) 6, 655, 858, 1308
BstDEI CTNAG 4 cut(s) 542, 750, 794, 1333
BstDSI CCRYGG 2 cut(s) 799, 1433
BstF5I GGATG 8 cut(s) 300, 578, 658, 823, 978, 1224, 1255, 1411
BstHHI GCGC 1 cut(s) 1057
BstKTI GATC 6 cut(s) 156, 808, 813, 1315, 1399, 1480
BstMAI GTCTC 1 cut(s) 874
BstMBI GATC 6 cut(s) 153, 805, 810, 1312, 1396, 1477
BstMWI GCNNNNNNNGC 3 cut(s) 650, 982, 1052
BstNI CCWGG 4 cut(s) 377, 585, 815, 839
BstNSI RCATGY 4 cut(s) 208, 478, 1011, 1310
BstSCI CCNGG 4 cut(s) 375, 583, 813, 837
BstSFI CTRYAG 4 cut(s) 531, 642, 714, 963
BstV1I GCAGC 6 cut(s) 106, 628, 656, 872, 895, 1160
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 2 cut(s) 810, 1396
BstXI CCANNNNNNTGG 2 cut(s) 269, 1434
BstYI RGATCY 2 cut(s) 810, 1396
BsuI GTATCC 2 cut(s) 558, 920
BsuRI GGCC 3 cut(s) 528, 657, 1203
BtgI CCRYGG 2 cut(s) 799, 1433
BtsCI GGATG 8 cut(s) 300, 578, 658, 823, 978, 1224, 1255, 1411
BtsIMutI CAGTG 4 cut(s) 608, 880, 1425, 1461
BveI ACCTGC 2 cut(s) 107, 1066
Cac8I GCNNGC 4 cut(s) 6, 655, 858, 1308
CaiI CAGNNNCTG 1 cut(s) 814
CfoI GCGC 1 cut(s) 1057
Cfr13I GGNCC 3 cut(s) 170, 527, 1358
Csp6I GTAC 5 cut(s) 314, 382, 778, 955, 1342
CspCI CAANNNNNGTGG 2 cut(s) 1401, 1436
CviAII CATG 8 cut(s) 205, 475, 800, 905, 989, 1008, 1307, 1434
CviQI GTAC 5 cut(s) 314, 382, 778, 955, 1342
DdeI CTNAG 4 cut(s) 542, 750, 794, 1333
DpnI GATC 6 cut(s) 155, 807, 812, 1314, 1398, 1479
DpnII GATC 6 cut(s) 153, 805, 810, 1312, 1396, 1477
DraI TTTAAA 3 cut(s) 634, 727, 1170
EaeI YGGCCR 2 cut(s) 655, 1201
Eam1104I CTCTTC 1 cut(s) 452
EarI CTCTTC 1 cut(s) 452
Eco130I CCWWGG 4 cut(s) 799, 1354, 1362, 1433
Eco32I GATATC 2 cut(s) 322, 343
Eco47I GGWCC 2 cut(s) 170, 1358
Eco57I CTGAAG 5 cut(s) 119, 128, 448, 959, 1413
EcoO109I RGGNCCY 1 cut(s) 1358
EcoRII CCWGG 4 cut(s) 375, 583, 813, 837
EcoRV GATATC 2 cut(s) 322, 343
EcoT14I CCWWGG 4 cut(s) 799, 1354, 1362, 1433
EcoT22I ATGCAT 1 cut(s) 1308
ErhI CCWWGG 4 cut(s) 799, 1354, 1362, 1433
FaeI CATG 8 cut(s) 208, 478, 803, 908, 992, 1011, 1310, 1437
FalI AAGNNNNNCTT 2 cut(s) 507, 539
FaqI GGGAC 3 cut(s) 534, 751, 1344
FatI CATG 8 cut(s) 204, 474, 799, 904, 988, 1007, 1306, 1433
FbaI TGATCA 2 cut(s) 805, 1312
Fnu4HI GCNGC 6 cut(s) 95, 642, 645, 861, 909, 1149
FokI GGATG 8 cut(s) 287, 585, 645, 830, 985, 1231, 1262, 1418
Fsp4HI GCNGC 6 cut(s) 95, 642, 645, 861, 909, 1149
FspBI CTAG 5 cut(s) 392, 488, 857, 1176, 1355
GlaI GCGC 1 cut(s) 1056
GluI GCNGC 6 cut(s) 95, 642, 645, 861, 909, 1149
GsuI CTGGAG 1 cut(s) 208
HaeIII GGCC 3 cut(s) 528, 657, 1203
HapII CCGG 2 cut(s) 560, 873
HhaI GCGC 1 cut(s) 1057
Hin1II CATG 8 cut(s) 208, 478, 803, 908, 992, 1011, 1310, 1437
Hin6I GCGC 1 cut(s) 1055
HinP1I GCGC 1 cut(s) 1055
HinfI GANTC 5 cut(s) 161, 329, 710, 876, 1331
HpaII CCGG 2 cut(s) 560, 873
HphI GGTGA 4 cut(s) 251, 815, 1240, 1487
Hpy166II GTNNAC 2 cut(s) 230, 497
Hpy188I TCNGA 6 cut(s) 326, 467, 481, 810, 1030, 1336
Hpy8I GTNNAC 2 cut(s) 230, 497
HpyAV CCTTC 3 cut(s) 94, 934, 1247
HpyCH4III ACNGT 1 cut(s) 1325
HpyCH4IV ACGT 1 cut(s) 1369
HpyCH4V TGCA 9 cut(s) 8, 533, 644, 1115, 1127, 1133, 1148, 1306, 1409
HpyF10VI GCNNNNNNNGC 3 cut(s) 650, 982, 1052
HpyF3I CTNAG 4 cut(s) 542, 750, 794, 1333
HpySE526I ACGT 1 cut(s) 1369
Hsp92II CATG 8 cut(s) 208, 478, 803, 908, 992, 1011, 1310, 1437
HspAI GCGC 1 cut(s) 1055
Kpn2I TCCGGA 2 cut(s) 559, 872
KpnI GGTACC 1 cut(s) 958
Ksp22I TGATCA 2 cut(s) 805, 1312
Kzo9I GATC 6 cut(s) 153, 805, 810, 1312, 1396, 1477
LguI GCTCTTC 1 cut(s) 452
LmnI GCTCC 4 cut(s) 39, 201, 913, 1423
Lsp1109I GCAGC 6 cut(s) 106, 628, 656, 872, 895, 1160
LweI GCATC 6 cut(s) 21, 963, 1033, 1197, 1293, 1396
MaeI CTAG 5 cut(s) 392, 488, 857, 1176, 1355
MaeII ACGT 1 cut(s) 1369
MaeIII GTNAC 6 cut(s) 49, 289, 365, 446, 1228, 1459
MalI GATC 6 cut(s) 155, 807, 812, 1314, 1398, 1479
MboI GATC 6 cut(s) 153, 805, 810, 1312, 1396, 1477
MboII GAAGA 8 cut(s) 83, 121, 435, 469, 1033, 1312, 1391, 1406
MfeI CAATTG 1 cut(s) 648
MflI RGATCY 2 cut(s) 810, 1396
MlsI TGGCCA 2 cut(s) 657, 1203
MluNI TGGCCA 2 cut(s) 657, 1203
MlyI GAGTC 1 cut(s) 1325
MmeI TCCRAC 2 cut(s) 259, 1073
MnlI CCTC 7 cut(s) 48, 395, 420, 562, 631, 1068, 1082
Mox20I TGGCCA 2 cut(s) 657, 1203
Mph1103I ATGCAT 1 cut(s) 1308
MroI TCCGGA 2 cut(s) 559, 872
MroXI GAANNNNTTC 3 cut(s) 461, 1068, 1398
MscI TGGCCA 2 cut(s) 657, 1203
MseI TTAA 7 cut(s) 417, 633, 726, 851, 1169, 1214, 1518
MslI CAYNNNNRTG 4 cut(s) 86, 264, 515, 1432
Msp20I TGGCCA 2 cut(s) 657, 1203
MspA1I CMGCKG 1 cut(s) 97
MspI CCGG 2 cut(s) 560, 873
MspR9I CCNGG 4 cut(s) 377, 585, 815, 839
MunI CAATTG 1 cut(s) 648
MvaI CCWGG 4 cut(s) 377, 585, 815, 839
MwoI GCNNNNNNNGC 3 cut(s) 650, 982, 1052
NcoI CCATGG 2 cut(s) 799, 1433
NdeII GATC 6 cut(s) 153, 805, 810, 1312, 1396, 1477
NheI GCTAGC 1 cut(s) 856
NlaIII CATG 8 cut(s) 208, 478, 803, 908, 992, 1011, 1310, 1437
NlaIV GGNNCC 5 cut(s) 374, 956, 986, 1360, 1425
NmuCI GTSAC 3 cut(s) 446, 1228, 1459
NsiI ATGCAT 1 cut(s) 1308
NspI RCATGY 4 cut(s) 208, 478, 1011, 1310
OliI CACNNNNGTG 2 cut(s) 86, 264
PaeI GCATGC 1 cut(s) 1310
PaqCI CACCTGC 1 cut(s) 107
PciI ACATGT 2 cut(s) 474, 1007
PciSI GCTCTTC 1 cut(s) 452
PdmI GAANNNNTTC 3 cut(s) 461, 1068, 1398
PfeI GAWTC 4 cut(s) 161, 329, 710, 876
PflMI CCANNNNNTGG 1 cut(s) 590
PfoI TCCNGGA 2 cut(s) 583, 813
PkrI GCNGC 6 cut(s) 96, 643, 646, 862, 910, 1150
PleI GAGTC 1 cut(s) 1325
PpsI GAGTC 1 cut(s) 1325
PpuMI RGGWCCY 1 cut(s) 1358
PscI ACATGT 2 cut(s) 474, 1007
Psp1406I AACGTT 1 cut(s) 1369
Psp5II RGGWCCY 1 cut(s) 1358
Psp6I CCWGG 4 cut(s) 375, 583, 813, 837
PspGI CCWGG 4 cut(s) 375, 583, 813, 837
PspN4I GGNNCC 5 cut(s) 374, 956, 986, 1360, 1425
PspPI GGNCC 3 cut(s) 170, 527, 1358
PspPPI RGGWCCY 1 cut(s) 1358
PsrI GAACNNNNNNTAC 2 cut(s) 365, 397
PstI CTGCAG 2 cut(s) 535, 646
PstNI CAGNNNCTG 1 cut(s) 814
PsuI RGATCY 2 cut(s) 810, 1396
PvuII CAGCTG 1 cut(s) 97
RsaI GTAC 5 cut(s) 315, 383, 779, 956, 1343
RsaNI GTAC 5 cut(s) 314, 382, 778, 955, 1342
RseI CAYNNNNRTG 4 cut(s) 86, 264, 515, 1432
SapI GCTCTTC 1 cut(s) 452
SaqAI TTAA 7 cut(s) 417, 633, 726, 851, 1169, 1214, 1518
SatI GCNGC 6 cut(s) 95, 642, 645, 861, 909, 1149
Sau3AI GATC 6 cut(s) 153, 805, 810, 1312, 1396, 1477
Sau96I GGNCC 3 cut(s) 170, 527, 1358
SbfI CCTGCAGG 1 cut(s) 535
SchI GAGTC 1 cut(s) 1325
ScrFI CCNGG 4 cut(s) 377, 585, 815, 839
SdaI CCTGCAGG 1 cut(s) 535
SfaNI GCATC 6 cut(s) 21, 963, 1033, 1197, 1293, 1396
SfcI CTRYAG 4 cut(s) 531, 642, 714, 963
SinI GGWCC 2 cut(s) 170, 1358
SmiMI CAYNNNNRTG 4 cut(s) 86, 264, 515, 1432
SmlI CTYRAG 2 cut(s) 567, 1059
SmoI CTYRAG 2 cut(s) 567, 1059
SphI GCATGC 1 cut(s) 1310
Sse8387I CCTGCAGG 1 cut(s) 535
SsiI CCGC 3 cut(s) 911, 921, 1351
SspMI CTAG 5 cut(s) 392, 488, 857, 1176, 1355
StyD4I CCNGG 4 cut(s) 375, 583, 813, 837
StyI CCWWGG 4 cut(s) 799, 1354, 1362, 1433
TaaI ACNGT 1 cut(s) 1325
TaiI ACGT 1 cut(s) 1372
TaqI TCGA 1 cut(s) 332
TatI WGTACW 1 cut(s) 1341
TfiI GAWTC 4 cut(s) 161, 329, 710, 876
Tru1I TTAA 7 cut(s) 417, 633, 726, 851, 1169, 1214, 1518
Tru9I TTAA 7 cut(s) 417, 633, 726, 851, 1169, 1214, 1518
TscAI CASTG 4 cut(s) 608, 887, 1425, 1468
TseFI GTSAC 3 cut(s) 446, 1228, 1459
TseI GCWGC 6 cut(s) 94, 641, 644, 860, 908, 1148
Tsp45I GTSAC 3 cut(s) 446, 1228, 1459
TspDTI ATGAA 4 cut(s) 834, 906, 1034, 1266
TspRI CASTG 4 cut(s) 608, 887, 1425, 1468
Van91I CCANNNNNTGG 1 cut(s) 590
VpaK11BI GGWCC 2 cut(s) 170, 1358
XapI RAATTY 3 cut(s) 596, 1000, 1270
XbaI TCTAGA 1 cut(s) 487
XceI RCATGY 4 cut(s) 208, 478, 1011, 1310
XmaJI CCTAGG 1 cut(s) 1354
XmnI GAANNNNTTC 3 cut(s) 461, 1068, 1398
XspI CTAG 5 cut(s) 392, 488, 857, 1176, 1355
Zsp2I ATGCAT 1 cut(s) 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.