Prupe.6G342300_v2.0.a1

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000149
Physical Location & Seq
Reverse (-)
29511086 .. 29513239
2154 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G342300.1

Sequence Viewer

Length: 1053 bp
ATGGCTGAAGAGCAGAGATGCCAGATTCCAAGAGTGCAATTGGGAAGTGAGGGATTAGAGGTTTCCAAGTTTGGATTTGGGTGTACGGGGCTAACTGGAATCTGCAATGAGGCTCCAGTCCCTGAAGAGCTTGGGATATCAATCATCAAGTACGCGTTCGATAAAGGAATAACATTCTTTGATACATCAGATGTTTGTGGACCGCATACTAATGAAGTTTTGATTGGAAAGGCATTGAAGCAGTTGCCTCGAGATAAGGTTCAGTTGGCTTCAAAATTTGGTGTTGTAAAATTTGAGCCTAATCAAGTTGTTGTAAATGGCACTCCTGAATATGCCCGCTCCTGCTGTGAGGCTAGCCTGAAGCGCCTCGGCGTGGACTACATTGATCTTTACTACCTGCACCGGATAGACACATCAGTCCCCATAGAGGACACTATGGAGGAGCTAAAGAAGCTGGTGAAAGAGGGGAAAATAAAGTACGTTGGATTATCTGAAGCTAGCCCAGACACAATAAGGAGGGCACATGCAGTTCATCCCATAACTGCTATACAAATGGAGTGGTCCCTTTGGACTCGTGAAATTGAGGAAGAAATTATCCCACTTTGCAGGGAACTCGGAATTGGTATAGTGCCATACAGCCCTCTTGGTCGTGGATTTTTCGGTGGCAAGGCAGTTGTCGAAAGTTTACCTGCAAATAGTTTTCAGGTATCAAATCCTCGTTTCCAAGGAGACAACCTTGAGAAAAACAAGATCCTTTATGGTAAAGTAGAAAAGTTGGCTGAAAAGCATGGATGCACCTCTGCACAACTCGCGCTTGCATGGATTCTTAATCAAGCTGATAATGTGGTACCTATCCCCGGGACAACTAAGACAAAAAATCTTGATGCTAATATTGGTTCCTTGAGCGTGCAACTCACGAGAGAAGACATAAAAGAGATTTCTGATATGATACCCGTCAACGCGGCGGCAGGGGATAGAGTTTCTGATAGTCTCATTCGCTGCTCATGGAAGTTTGCAAATACACCACCAAAACATGGCAAAACTCCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

351

Amino Acids

38.56

Weight (kDa)

6.14

Isoelectric Point (pI)

31.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000149)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01550 FvH4_4g01550 FvH4_4g01550 FvH4_6g03001 FvH4_6g03010 FvH4_6g03030 FvH4_6g03050 FvH4_6g03050 FvH4_6g03050 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03052 FvH4_6g03070 FvH4_6g03070 FvH4_6g03110
malus_domestica MD04G1223200.v1.1 MD08G1240600.v1.1 MD12G1239000.v1.1 MD12G1239100.v1.1 MD12G1239200.v1.1 MD12G1239300.v1.1 MD12G1239400.v1.1 MD12G1239600.v1.1 MD12G1239800.v1.1 MD12G1240000.v1.1 MD12G1240300.v1.1 MD12G1240400.v1.1 MD13G1200700.v1.1
prunus_persica Prupe.1G021900_v2.0.a1 Prupe.1G022000_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G341900_v2.0.a1 Prupe.6G342100_v2.0.a1 Prupe.6G342200_v2.0.a1 Prupe.6G342300_v2.0.a1
pyrus_communis pycom04g19710 pycom12g21970 pycom12g21980 pycom12g21990 pycom12g22000 pycom12g22020 pycom13g17420 pycom16g16880
rosa_chinensis RchiOBHm_Chr3g0450451 RchiOBHm_Chr3g0451211 RchiOBHm_Chr3g0451221 RchiOBHm_Chr3g0451251 RchiOBHm_Chr3g0451261 RchiOBHm_Chr3g0451281 RchiOBHm_Chr3g0451321 RchiOBHm_Chr3g0451331 RchiOBHm_Chr3g0451341 RchiOBHm_Chr3g0454931 RchiOBHm_Chr4g0387811 RchiOBHm_Chr4g0387821 RchiOBHm_Chr4g0388101
rosa_laevigata RLG00000010080 RLG00000010092 RLG00000010093 RLG00000025402 RLG00000025666 RLG00000025667 RLG00000025668 RLG00000025669 RLG00000025672 RLG00000025673 RLG00000025674 RLG00000025675 RLG00000025676 RLG00000025678 RLG00000025679 RLG00000025729
rosa_multiflora Rmu_co8283913.1_g000001 Rmu_co8296899.1_g000001 Rmu_sc0000330.1_g000014 Rmu_sc0001792.1_g000004 Rmu_sc0002169.1_g000002 Rmu_sc0002180.1_g000028 Rmu_sc0002509.1_g000009 Rmu_sc0002575.1_g000011 Rmu_sc0002575.1_g000013 Rmu_sc0002575.1_g000015 Rmu_sc0002575.1_g000019 Rmu_sc0002575.1_g000021 Rmu_sc0002575.1_g000022 Rmu_sc0012229.1_g000010 Rmu_sc0012229.1_g000014 Rmu_sc0012229.1_g000017 Rmu_sc0012229.1_g000018 Rmu_sc0013958.1_g000001 Rmu_sc0030279.1_g000001 Rmu_sc0031850.1_g000002
rosa_roxburghii Rroxscaffold_163G00450840 Rroxscaffold_163G00450860 Rroxscaffold_163G00450870 Rroxscaffold_164G00436570 Rroxscaffold_5G00334430 Rroxscaffold_5G00334440 Rroxscaffold_5G00334650 Rroxscaffold_6G00428150 Rroxscaffold_6G00428660 Rroxscaffold_6G00428680 Rroxscaffold_6G00428710 Rroxscaffold_6G00428720 Rroxscaffold_6G00428730 Rroxscaffold_6G00428740 Rroxscaffold_6G00428750 Rroxscaffold_6G00428760
rosa_rugosa Rorug02G0535300 Rorug02G0627900 Rorug02G0632500 Rorug02G0632600 Rorug02G0633000 Rorug02G0633100 Rorug03G0003000 Rorug03G0313700 Rorug03G0314800 Rorug05G0229300 Rorug07G0155500
rosa_samantha Rh3AG028500 Rh3AG035300 Rh3AG035400 Rh3AG035500 Rh3AG035600 Rh3AG035700 Rh3AG035800 Rh3AG035900 Rh3AG062900 Rh3BG029000 Rh3BG035500 Rh3BG035600 Rh3BG035800 Rh3BG035900 Rh3BG036000 Rh3BG036100 Rh3BG036200 Rh3BG036300 Rh3BG036400 Rh3BG036500 Rh3BG036600 Rh3BG064800 Rh3CG027800 Rh3CG034200 Rh3CG034400 Rh3CG034500 Rh3CG034600 Rh3CG034700 Rh3CG034800 Rh3CG034900 Rh3CG063700 Rh3DG035100 Rh3DG035200 Rh3DG035400 Rh3DG035500 Rh3DG035600 Rh3DG035700 Rh3DG035800 Rh3DG035900 Rh3DG036000 Rh3DG036100 Rh3DG064800 Rh4AG018700 Rh4BG013600 Rh4BG013700 Rh4BG014900 Rh4CG021200 Rh4DG015600
rosa_wichuraiana Rw0G001850 Rw3G002200 Rw3G002580 Rw3G002590 Rw3G002610 Rw3G002620 Rw3G002630 Rw3G002640 Rw3G002650 Rw3G002660 Rw3G004920 Rw3G016120 Rw4G001220 Rw4G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 416
Acc36I ACCTGC 2 cut(s) 405, 697
Acc65I GGTACC 1 cut(s) 847
AccB1I GGYRCC 1 cut(s) 847
AccB7I CCANNNNNTGG 1 cut(s) 1034
AccBSI CCGCTC 1 cut(s) 339
AccII CGCG 3 cut(s) 155, 812, 962
AciI CCGC 4 cut(s) 203, 337, 962, 965
AclWI GGATC 1 cut(s) 745
AcsI RAATTY 2 cut(s) 275, 290
AcuI CTGAAG 4 cut(s) 27, 144, 380, 513
AfaI GTAC 4 cut(s) 85, 152, 479, 849
AfiI CCNNNNNNNGG 4 cut(s) 373, 427, 857, 1034
AflIII ACRYGT 1 cut(s) 153
AgsI TTSAA 2 cut(s) 238, 273
AjuI GAANNNNNNNTTGG 4 cut(s) 207, 239, 603, 635
AluBI AGCT 5 cut(s) 130, 445, 454, 497, 836
AluI AGCT 5 cut(s) 130, 445, 454, 497, 836
Alw26I GTCTC 2 cut(s) 723, 995
AlwI GGATC 1 cut(s) 745
AlwNI CAGNNNCTG 1 cut(s) 122
Ama87I CYCGRG 2 cut(s) 249, 857
ApeKI GCWGC 1 cut(s) 999
ApoI RAATTY 2 cut(s) 275, 290
Asp718I GGTACC 1 cut(s) 847
AspLEI GCGC 2 cut(s) 366, 814
AspS9I GGNCC 2 cut(s) 200, 561
AsuC2I CCSGG 2 cut(s) 858, 859
AsuHPI GGTGA 1 cut(s) 469
AsuNHI GCTAGC 2 cut(s) 353, 497
AvaI CYCGRG 2 cut(s) 249, 857
AvaII GGWCC 2 cut(s) 200, 561
BaeGI GKGCMC 1 cut(s) 523
BanI GGYRCC 1 cut(s) 847
BauI CACGAG 2 cut(s) 573, 916
BbsI GAAGAC 1 cut(s) 930
BbvI GCAGC 1 cut(s) 986
BcgI CGANNNNNNTGC 4 cut(s) 230, 264, 595, 629
BcnI CCSGG 2 cut(s) 858, 859
BcoDI GTCTC 2 cut(s) 723, 995
BfaI CTAG 2 cut(s) 354, 498
BfoI RGCGCY 1 cut(s) 367
BfuAI ACCTGC 2 cut(s) 405, 697
BisI GCNGC 3 cut(s) 963, 966, 1000
BlsI GCNGC 3 cut(s) 964, 967, 1001
Bme1390I CCNGG 2 cut(s) 858, 859
Bme18I GGWCC 2 cut(s) 200, 561
BmeT110I CYCGRG 2 cut(s) 249, 857
BmgT120I GGNCC 2 cut(s) 200, 561
BmiI GGNNCC 4 cut(s) 114, 563, 849, 898
BmrFI CCNGG 2 cut(s) 858, 859
BmsI GCATC 3 cut(s) 8, 782, 874
BmtI GCTAGC 2 cut(s) 357, 501
BpiI GAAGAC 1 cut(s) 930
BpmI CTGGAG 1 cut(s) 99
BpuEI CTTGAG 2 cut(s) 758, 922
BpuMI CCSGG 2 cut(s) 858, 859
BsaBI GATNNNNATC 1 cut(s) 140
BsaJI CCNNGG 4 cut(s) 367, 724, 856, 857
BsaWI WCCGGW 1 cut(s) 402
Bsc4I CCNNNNNNNGG 4 cut(s) 373, 427, 857, 1034
Bse1I ACTGG 2 cut(s) 100, 116
Bse3DI GCAATG 1 cut(s) 112
Bse8I GATNNNNATC 1 cut(s) 140
BseDI CCNNGG 4 cut(s) 367, 724, 856, 857
BseGI GGATG 2 cut(s) 532, 797
BseJI GATNNNNATC 1 cut(s) 140
BseLI CCNNNNNNNGG 4 cut(s) 373, 427, 857, 1034
BseMI GCAATG 1 cut(s) 112
BseNI ACTGG 2 cut(s) 100, 116
BseRI GAGGAG 1 cut(s) 455
BseSI GKGCMC 1 cut(s) 523
BseXI GCAGC 1 cut(s) 986
BsgI GTGCAG 2 cut(s) 383, 786
Bsh1236I CGCG 3 cut(s) 155, 812, 962
BshNI GGYRCC 1 cut(s) 847
BsiHKCI CYCGRG 2 cut(s) 249, 857
BsiSI CCGG 2 cut(s) 403, 858
BslFI GGGAC 4 cut(s) 104, 404, 547, 874
BslI CCNNNNNNNGG 4 cut(s) 373, 427, 857, 1034
BsmAI GTCTC 2 cut(s) 723, 995
BsmFI GGGAC 4 cut(s) 104, 404, 547, 874
BsoBI CYCGRG 2 cut(s) 249, 857
Bsp1286I GDGCHC 1 cut(s) 523
Bsp143I GATC 2 cut(s) 385, 750
BspACI CCGC 4 cut(s) 203, 337, 962, 965
BspFNI CGCG 3 cut(s) 155, 812, 962
BspLI GGNNCC 4 cut(s) 114, 563, 849, 898
BspMI ACCTGC 2 cut(s) 405, 697
BspOI GCTAGC 2 cut(s) 357, 501
BspPI GGATC 1 cut(s) 745
BspQI GCTCTTC 2 cut(s) 3, 120
BspT107I GGYRCC 1 cut(s) 847
BsrBI CCGCTC 1 cut(s) 339
BsrDI GCAATG 1 cut(s) 112
BsrI ACTGG 2 cut(s) 100, 116
BssECI CCNNGG 4 cut(s) 367, 724, 856, 857
BssMI GATC 2 cut(s) 385, 750
BssSI CACGAG 2 cut(s) 573, 916
BssT1I CCWWGG 1 cut(s) 724
Bst2BI CACGAG 2 cut(s) 573, 916
Bst6I CTCTTC 2 cut(s) 3, 120
BstC8I GCNNGC 5 cut(s) 337, 355, 499, 816, 908
BstDEI CTNAG 1 cut(s) 867
BstF5I GGATG 2 cut(s) 532, 797
BstFNI CGCG 3 cut(s) 155, 812, 962
BstH2I RGCGCY 1 cut(s) 367
BstHHI GCGC 2 cut(s) 366, 814
BstKTI GATC 2 cut(s) 388, 753
BstMAI GTCTC 2 cut(s) 723, 995
BstMBI GATC 2 cut(s) 385, 750
BstMWI GCNNNNNNNGC 3 cut(s) 363, 451, 809
BstNSI RCATGY 1 cut(s) 527
BstSCI CCNGG 2 cut(s) 856, 857
BstSLI GKGCMC 1 cut(s) 523
BstUI CGCG 3 cut(s) 155, 812, 962
BstV1I GCAGC 1 cut(s) 986
BstV2I GAAGAC 1 cut(s) 930
BstX2I RGATCY 1 cut(s) 750
BstYI RGATCY 1 cut(s) 750
BtsCI GGATG 2 cut(s) 532, 797
BveI ACCTGC 2 cut(s) 405, 697
Cac8I GCNNGC 5 cut(s) 337, 355, 499, 816, 908
CaiI CAGNNNCTG 1 cut(s) 122
CfoI GCGC 2 cut(s) 366, 814
Cfr13I GGNCC 2 cut(s) 200, 561
Cfr9I CCCGGG 1 cut(s) 857
Csp6I GTAC 4 cut(s) 84, 151, 478, 848
CspCI CAANNNNNGTGG 2 cut(s) 539, 574
CviAII CATG 5 cut(s) 524, 788, 819, 1005, 1034
CviQI GTAC 4 cut(s) 84, 151, 478, 848
DdeI CTNAG 1 cut(s) 867
DpnI GATC 2 cut(s) 387, 752
DpnII GATC 2 cut(s) 385, 750
DrdI GACNNNNNNGTC 1 cut(s) 416
DseDI GACNNNNNNGTC 1 cut(s) 416
Eam1104I CTCTTC 2 cut(s) 3, 120
EarI CTCTTC 2 cut(s) 3, 120
Eco130I CCWWGG 1 cut(s) 724
Eco32I GATATC 1 cut(s) 138
Eco47I GGWCC 2 cut(s) 200, 561
Eco57I CTGAAG 4 cut(s) 27, 144, 380, 513
Eco88I CYCGRG 2 cut(s) 249, 857
EcoRV GATATC 1 cut(s) 138
EcoT14I CCWWGG 1 cut(s) 724
ErhI CCWWGG 1 cut(s) 724
FaeI CATG 5 cut(s) 527, 791, 822, 1008, 1037
FaqI GGGAC 4 cut(s) 104, 404, 547, 874
FatI CATG 5 cut(s) 523, 787, 818, 1004, 1033
FauI CCCGC 1 cut(s) 344
Fnu4HI GCNGC 3 cut(s) 963, 966, 1000
FokI GGATG 2 cut(s) 519, 804
Fsp4HI GCNGC 3 cut(s) 963, 966, 1000
FspBI CTAG 2 cut(s) 354, 498
GlaI GCGC 2 cut(s) 365, 813
GluI GCNGC 3 cut(s) 963, 966, 1000
GsuI CTGGAG 1 cut(s) 99
HaeII RGCGCY 1 cut(s) 367
HapII CCGG 2 cut(s) 403, 858
HhaI GCGC 2 cut(s) 366, 814
Hin1II CATG 5 cut(s) 527, 791, 822, 1008, 1037
Hin6I GCGC 2 cut(s) 364, 812
HinP1I GCGC 2 cut(s) 364, 812
HincII GTYRAC 1 cut(s) 958
HindII GTYRAC 1 cut(s) 958
HinfI GANTC 4 cut(s) 25, 99, 571, 823
HpaII CCGG 2 cut(s) 403, 858
HphI GGTGA 1 cut(s) 469
Hpy166II GTNNAC 5 cut(s) 84, 200, 376, 686, 958
Hpy188I TCNGA 5 cut(s) 190, 493, 617, 943, 985
Hpy188III TCNNGA 5 cut(s) 251, 326, 575, 881, 916
Hpy8I GTNNAC 5 cut(s) 84, 200, 376, 686, 958
HpyCH4IV ACGT 1 cut(s) 480
HpyF10VI GCNNNNNNNGC 3 cut(s) 363, 451, 809
HpyF3I CTNAG 1 cut(s) 867
HpySE526I ACGT 1 cut(s) 480
Hsp92II CATG 5 cut(s) 527, 791, 822, 1008, 1037
HspAI GCGC 2 cut(s) 364, 812
KpnI GGTACC 1 cut(s) 851
Kzo9I GATC 2 cut(s) 385, 750
LguI GCTCTTC 2 cut(s) 3, 120
LmnI GCTCC 3 cut(s) 118, 344, 442
Lsp1109I GCAGC 1 cut(s) 986
LweI GCATC 3 cut(s) 8, 782, 874
MaeI CTAG 2 cut(s) 354, 498
MaeII ACGT 1 cut(s) 480
MalI GATC 2 cut(s) 387, 752
MbiI CCGCTC 1 cut(s) 339
MboI GATC 2 cut(s) 385, 750
MboII GAAGA 4 cut(s) 20, 137, 599, 935
MfeI CAATTG 1 cut(s) 38
MflI RGATCY 1 cut(s) 750
MhlI GDGCHC 1 cut(s) 523
MluCI AATT 6 cut(s) 38, 275, 290, 579, 591, 618
MluI ACGCGT 1 cut(s) 153
MlyI GAGTC 1 cut(s) 565
MmeI TCCRAC 1 cut(s) 463
MseI TTAA 1 cut(s) 828
MslI CAYNNNNRTG 1 cut(s) 210
MspI CCGG 2 cut(s) 403, 858
MspR9I CCNGG 2 cut(s) 858, 859
MunI CAATTG 1 cut(s) 38
MvnI CGCG 3 cut(s) 155, 812, 962
MwoI GCNNNNNNNGC 3 cut(s) 363, 451, 809
NciI CCSGG 2 cut(s) 858, 859
NdeII GATC 2 cut(s) 385, 750
NheI GCTAGC 2 cut(s) 353, 497
NlaIII CATG 5 cut(s) 527, 791, 822, 1008, 1037
NlaIV GGNNCC 4 cut(s) 114, 563, 849, 898
NmeAIII GCCGAG 1 cut(s) 348
NspI RCATGY 1 cut(s) 527
PaeR7I CTCGAG 1 cut(s) 249
PciSI GCTCTTC 2 cut(s) 3, 120
PfeI GAWTC 3 cut(s) 25, 99, 823
PflMI CCANNNNNTGG 1 cut(s) 1034
PkrI GCNGC 3 cut(s) 964, 967, 1001
PleI GAGTC 1 cut(s) 565
PpsI GAGTC 1 cut(s) 565
PspN4I GGNNCC 4 cut(s) 114, 563, 849, 898
PspPI GGNCC 2 cut(s) 200, 561
PstNI CAGNNNCTG 1 cut(s) 122
PsuI RGATCY 1 cut(s) 750
RsaI GTAC 4 cut(s) 85, 152, 479, 849
RsaNI GTAC 4 cut(s) 84, 151, 478, 848
RseI CAYNNNNRTG 1 cut(s) 210
SapI GCTCTTC 2 cut(s) 3, 120
SaqAI TTAA 1 cut(s) 828
SatI GCNGC 3 cut(s) 963, 966, 1000
Sau3AI GATC 2 cut(s) 385, 750
Sau96I GGNCC 2 cut(s) 200, 561
SchI GAGTC 1 cut(s) 565
ScrFI CCNGG 2 cut(s) 858, 859
SduI GDGCHC 1 cut(s) 523
SfaNI GCATC 3 cut(s) 8, 782, 874
Sfr274I CTCGAG 1 cut(s) 249
SinI GGWCC 2 cut(s) 200, 561
SlaI CTCGAG 1 cut(s) 249
SmaI CCCGGG 1 cut(s) 859
SmiMI CAYNNNNRTG 1 cut(s) 210
SmlI CTYRAG 3 cut(s) 249, 737, 901
SmoI CTYRAG 3 cut(s) 249, 737, 901
Sse9I AATT 6 cut(s) 38, 275, 290, 579, 591, 618
SsiI CCGC 4 cut(s) 203, 337, 962, 965
SspI AATATT 1 cut(s) 892
SspMI CTAG 2 cut(s) 354, 498
StyD4I CCNGG 2 cut(s) 856, 857
StyI CCWWGG 1 cut(s) 724
TaiI ACGT 1 cut(s) 483
TaqI TCGA 3 cut(s) 159, 250, 678
TasI AATT 6 cut(s) 38, 275, 290, 579, 591, 618
TauI GCSGC 2 cut(s) 965, 968
TfiI GAWTC 3 cut(s) 25, 99, 823
Tru1I TTAA 1 cut(s) 828
Tru9I TTAA 1 cut(s) 828
TseI GCWGC 1 cut(s) 999
TspDTI ATGAA 2 cut(s) 228, 521
TspMI CCCGGG 1 cut(s) 857
Van91I CCANNNNNTGG 1 cut(s) 1034
VpaK11BI GGWCC 2 cut(s) 200, 561
XapI RAATTY 2 cut(s) 275, 290
XceI RCATGY 1 cut(s) 527
XhoI CTCGAG 1 cut(s) 249
XmaI CCCGGG 1 cut(s) 857
XspI CTAG 2 cut(s) 354, 498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.