Rroxscaffold_6G00428720

aldo-keto reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000149
Physical Location & Seq
Forward (+)
49097141 .. 49100423
3283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00428720.1

Sequence Viewer

Length: 1047 bp
ATGGATGAAGCTAGCCAAATCCAAGTTCCAAGGGTTAAACTGGGCAATCAGGGACTTGAGGTCTCAAAATTGGGGTTTGGATGCATGGGCCTGTCTGGAGTCTACAACTCTCCTCTTGCTGATGAGGATGGAATCTCAATAATAAAAGAGGCTTTCAATAAAGGAATCACTTTCTTTGACACAGCTGATGTATATGGACCTCATTTGAATGAAATTCTTGTTGGAAAGGCGCTGAAGCAGTTGCCAAGAGAAAAAATTCAATTAGCCACAAAGTTTGGTATTGTTGGAAGAGCGGATCCTCCTGGTATTACAGCCAAGGGAACTCCAGAATATGTCCGCTCATGCTGTGAGGCTAGCTTGAAGCGTCTTGATGTGGACTACATTGATCTGTATTATCAACATCGGGTGGACACTTCGGTGCCTATAGAGGATACTATGGGTGAGCTGAAGAAACTGGTGGAAGAAGGAAAAATAAAATATATCGGGTTATCTGAAGCCAGTCCGGACACCATAAGGAGGGCTCATGCAGTTCATCCCATCACGGCTCTACAAATGGAGTGGTCCCTCTGGACTCGTGATATTGAGGAAGAAATTGTTCCACTTTGCAGGGAGCTTGGCATTGGAATAGTACCATATAGTCCCCTTGGTCGTGGGTTTTTCGGTGGGAAAGCAGTTGTGGAAAGTGTGCCTTCAAATAGTTTCGTGTCGACACATCCTCGGTTCATAGGAGAAAACTTGGAGAAGAACAAGAACATTTACAATCGCATGGAAAGCCTTGCTAAGATACACCAATGCTTTCCTGCTCAACTAGCACTAGCATGGGTTCTCCACCAAGGAGATGATGTTGTACCTATCCCCGGGACAACAAAGATTAAGAACCTGGATGCAAACATTGGCTCCTTGAAGGTGAAACTTGGGGAAGAGGACTTGAAAGAAGTTTCTGGTGCTGTACCACTCGACCAAGTCGCCGGTGACAGAACTTATGGAAGCCTGATGCCTTTGCAATGGAAATTCGCCAACACTCCCCCAAAAGAATCCGCGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

348

Amino Acids

38.24

Weight (kDa)

5.75

Isoelectric Point (pI)

31.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 23 - 314 7.3e-76 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000149)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01550 FvH4_4g01550 FvH4_4g01550 FvH4_6g03001 FvH4_6g03010 FvH4_6g03030 FvH4_6g03050 FvH4_6g03050 FvH4_6g03050 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03052 FvH4_6g03070 FvH4_6g03070 FvH4_6g03110
malus_domestica MD04G1223200.v1.1 MD08G1240600.v1.1 MD12G1239000.v1.1 MD12G1239100.v1.1 MD12G1239200.v1.1 MD12G1239300.v1.1 MD12G1239400.v1.1 MD12G1239600.v1.1 MD12G1239800.v1.1 MD12G1240000.v1.1 MD12G1240300.v1.1 MD12G1240400.v1.1 MD13G1200700.v1.1
prunus_persica Prupe.1G021900_v2.0.a1 Prupe.1G022000_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G341900_v2.0.a1 Prupe.6G342100_v2.0.a1 Prupe.6G342200_v2.0.a1 Prupe.6G342300_v2.0.a1
pyrus_communis pycom04g19710 pycom12g21970 pycom12g21980 pycom12g21990 pycom12g22000 pycom12g22020 pycom13g17420 pycom16g16880
rosa_chinensis RchiOBHm_Chr3g0450451 RchiOBHm_Chr3g0451211 RchiOBHm_Chr3g0451221 RchiOBHm_Chr3g0451251 RchiOBHm_Chr3g0451261 RchiOBHm_Chr3g0451281 RchiOBHm_Chr3g0451321 RchiOBHm_Chr3g0451331 RchiOBHm_Chr3g0451341 RchiOBHm_Chr3g0454931 RchiOBHm_Chr4g0387811 RchiOBHm_Chr4g0387821 RchiOBHm_Chr4g0388101
rosa_laevigata RLG00000010080 RLG00000010092 RLG00000010093 RLG00000025402 RLG00000025666 RLG00000025667 RLG00000025668 RLG00000025669 RLG00000025672 RLG00000025673 RLG00000025674 RLG00000025675 RLG00000025676 RLG00000025678 RLG00000025679 RLG00000025729
rosa_multiflora Rmu_co8283913.1_g000001 Rmu_co8296899.1_g000001 Rmu_sc0000330.1_g000014 Rmu_sc0001792.1_g000004 Rmu_sc0002169.1_g000002 Rmu_sc0002180.1_g000028 Rmu_sc0002509.1_g000009 Rmu_sc0002575.1_g000011 Rmu_sc0002575.1_g000013 Rmu_sc0002575.1_g000015 Rmu_sc0002575.1_g000019 Rmu_sc0002575.1_g000021 Rmu_sc0002575.1_g000022 Rmu_sc0012229.1_g000010 Rmu_sc0012229.1_g000014 Rmu_sc0012229.1_g000017 Rmu_sc0012229.1_g000018 Rmu_sc0013958.1_g000001 Rmu_sc0030279.1_g000001 Rmu_sc0031850.1_g000002
rosa_roxburghii Rroxscaffold_163G00450840 Rroxscaffold_163G00450860 Rroxscaffold_163G00450870 Rroxscaffold_164G00436570 Rroxscaffold_5G00334430 Rroxscaffold_5G00334440 Rroxscaffold_5G00334650 Rroxscaffold_6G00428150 Rroxscaffold_6G00428660 Rroxscaffold_6G00428680 Rroxscaffold_6G00428710 Rroxscaffold_6G00428720 Rroxscaffold_6G00428730 Rroxscaffold_6G00428740 Rroxscaffold_6G00428750 Rroxscaffold_6G00428760
rosa_rugosa Rorug02G0535300 Rorug02G0627900 Rorug02G0632500 Rorug02G0632600 Rorug02G0633000 Rorug02G0633100 Rorug03G0003000 Rorug03G0313700 Rorug03G0314800 Rorug05G0229300 Rorug07G0155500
rosa_samantha Rh3AG028500 Rh3AG035300 Rh3AG035400 Rh3AG035500 Rh3AG035600 Rh3AG035700 Rh3AG035800 Rh3AG035900 Rh3AG062900 Rh3BG029000 Rh3BG035500 Rh3BG035600 Rh3BG035800 Rh3BG035900 Rh3BG036000 Rh3BG036100 Rh3BG036200 Rh3BG036300 Rh3BG036400 Rh3BG036500 Rh3BG036600 Rh3BG064800 Rh3CG027800 Rh3CG034200 Rh3CG034400 Rh3CG034500 Rh3CG034600 Rh3CG034700 Rh3CG034800 Rh3CG034900 Rh3CG063700 Rh3DG035100 Rh3DG035200 Rh3DG035400 Rh3DG035500 Rh3DG035600 Rh3DG035700 Rh3DG035800 Rh3DG035900 Rh3DG036000 Rh3DG036100 Rh3DG064800 Rh4AG018700 Rh4BG013600 Rh4BG013700 Rh4BG014900 Rh4CG021200 Rh4DG015600
rosa_wichuraiana Rw0G001850 Rw3G002200 Rw3G002580 Rw3G002590 Rw3G002610 Rw3G002620 Rw3G002630 Rw3G002640 Rw3G002650 Rw3G002660 Rw3G004920 Rw3G016120 Rw4G001220 Rw4G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 418
AccBSI CCGCTC 2 cut(s) 293, 339
AccI GTMKAC 2 cut(s) 102, 707
AccII CGCG 1 cut(s) 1040
AccIII TCCGGA 1 cut(s) 502
AciI CCGC 4 cut(s) 293, 337, 1038, 1040
AclWI GGATC 2 cut(s) 290, 303
AcsI RAATTY 3 cut(s) 213, 255, 1010
AcuI CTGAAG 3 cut(s) 254, 467, 513
AfaI GTAC 3 cut(s) 630, 849, 951
AfiI CCNNNNNNNGG 2 cut(s) 516, 857
AgsI TTSAA 7 cut(s) 157, 208, 260, 361, 693, 904, 931
AhdI GACNNNNNGTC 1 cut(s) 59
AjnI CCWGG 2 cut(s) 301, 879
AjuI GAANNNNNNNTTGG 4 cut(s) 9, 41, 204, 236
AleI CACNNNNGTG 1 cut(s) 416
AluBI AGCT 5 cut(s) 11, 185, 357, 445, 613
AluI AGCT 5 cut(s) 11, 185, 357, 445, 613
Alw26I GTCTC 1 cut(s) 67
AlwI GGATC 2 cut(s) 290, 303
Ama87I CYCGRG 1 cut(s) 857
Aor13HI TCCGGA 1 cut(s) 502
AoxI GGCC 1 cut(s) 88
ApoI RAATTY 3 cut(s) 213, 255, 1010
Asp700I GAANNNNTTC 2 cut(s) 255, 594
AspLEI GCGC 1 cut(s) 232
AspS9I GGNCC 3 cut(s) 88, 197, 561
AsuC2I CCSGG 2 cut(s) 858, 859
AsuHPI GGTGA 3 cut(s) 452, 919, 983
AsuNHI GCTAGC 2 cut(s) 11, 353
AvaI CYCGRG 1 cut(s) 857
AvaII GGWCC 2 cut(s) 197, 561
BamHI GGATCC 1 cut(s) 295
BanI GGYRCC 1 cut(s) 418
BanII GRGCYC 1 cut(s) 523
BauI CACGAG 1 cut(s) 573
BccI CCATC 2 cut(s) 122, 545
BceAI ACGGC 1 cut(s) 558
BciT130I CCWGG 2 cut(s) 303, 881
BciVI GTATCC 1 cut(s) 424
BcnI CCSGG 2 cut(s) 858, 859
BcoDI GTCTC 1 cut(s) 67
BfaI CTAG 4 cut(s) 12, 354, 809, 815
BfmI CTRYAG 1 cut(s) 423
BfoI RGCGCY 1 cut(s) 233
BfuI GTATCC 1 cut(s) 424
Bme1390I CCNGG 4 cut(s) 303, 858, 859, 881
Bme18I GGWCC 2 cut(s) 197, 561
BmeRI GACNNNNNGTC 1 cut(s) 59
BmeT110I CYCGRG 1 cut(s) 857
BmgT120I GGNCC 3 cut(s) 88, 197, 561
BmiI GGNNCC 4 cut(s) 297, 420, 563, 898
BmrFI CCNGG 4 cut(s) 303, 858, 859, 881
BmrI ACTGGG 1 cut(s) 50
BmsI GCATC 3 cut(s) 71, 874, 984
BmtI GCTAGC 2 cut(s) 15, 357
BmuI ACTGGG 1 cut(s) 50
BpmI CTGGAG 2 cut(s) 117, 309
BpuEI CTTGAG 1 cut(s) 77
BpuMI CCSGG 2 cut(s) 858, 859
BsaI GGTCTC 1 cut(s) 67
BsaJI CCNNGG 8 cut(s) 29, 315, 643, 716, 832, 856, 857, 1038
BsaWI WCCGGW 1 cut(s) 502
BsaXI ACNNNNNCTCC 4 cut(s) 828, 858, 881, 911
Bsc4I CCNNNNNNNGG 2 cut(s) 516, 857
Bse118I RCCGGY 1 cut(s) 968
Bse1I ACTGG 3 cut(s) 45, 459, 498
Bse3DI GCAATG 1 cut(s) 1010
BseAI TCCGGA 1 cut(s) 502
BseBI CCWGG 2 cut(s) 303, 881
BseDI CCNNGG 8 cut(s) 29, 315, 643, 716, 832, 856, 857, 1038
BseGI GGATG 6 cut(s) 10, 86, 133, 532, 712, 889
BseLI CCNNNNNNNGG 2 cut(s) 516, 857
BseMI GCAATG 1 cut(s) 1010
BseNI ACTGG 3 cut(s) 45, 459, 498
BseRI GAGGAG 1 cut(s) 102
Bsh1236I CGCG 1 cut(s) 1040
BshFI GGCC 1 cut(s) 90
BshNI GGYRCC 1 cut(s) 418
BsiHKCI CYCGRG 1 cut(s) 857
BsiSI CCGG 3 cut(s) 503, 858, 969
BslFI GGGAC 4 cut(s) 66, 547, 624, 874
BslI CCNNNNNNNGG 2 cut(s) 516, 857
BsmAI GTCTC 1 cut(s) 67
BsmFI GGGAC 4 cut(s) 66, 547, 624, 874
BsnI GGCC 1 cut(s) 90
Bso31I GGTCTC 1 cut(s) 67
BsoBI CYCGRG 1 cut(s) 857
Bsp1286I GDGCHC 1 cut(s) 523
Bsp13I TCCGGA 1 cut(s) 502
Bsp143I GATC 2 cut(s) 295, 385
BspACI CCGC 4 cut(s) 293, 337, 1038, 1040
BspANI GGCC 1 cut(s) 90
BspEI TCCGGA 1 cut(s) 502
BspFNI CGCG 1 cut(s) 1040
BspLI GGNNCC 4 cut(s) 297, 420, 563, 898
BspOI GCTAGC 2 cut(s) 15, 357
BspPI GGATC 2 cut(s) 290, 303
BspQI GCTCTTC 1 cut(s) 283
BspT107I GGYRCC 1 cut(s) 418
BspTNI GGTCTC 1 cut(s) 67
BsrBI CCGCTC 2 cut(s) 293, 339
BsrDI GCAATG 1 cut(s) 1010
BsrFI RCCGGY 1 cut(s) 968
BsrI ACTGG 3 cut(s) 45, 459, 498
BssAI RCCGGY 1 cut(s) 968
BssECI CCNNGG 8 cut(s) 29, 315, 643, 716, 832, 856, 857, 1038
BssMI GATC 2 cut(s) 295, 385
BssSI CACGAG 1 cut(s) 573
BssT1I CCWWGG 4 cut(s) 29, 315, 643, 832
Bst2BI CACGAG 1 cut(s) 573
Bst2UI CCWGG 2 cut(s) 303, 881
Bst6I CTCTTC 2 cut(s) 283, 915
BstC8I GCNNGC 2 cut(s) 13, 355
BstDEI CTNAG 1 cut(s) 780
BstDSI CCRYGG 1 cut(s) 1038
BstF5I GGATG 6 cut(s) 10, 86, 133, 532, 712, 889
BstFNI CGCG 1 cut(s) 1040
BstH2I RGCGCY 1 cut(s) 233
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 2 cut(s) 298, 388
BstMAI GTCTC 1 cut(s) 67
BstMBI GATC 2 cut(s) 295, 385
BstMWI GCNNNNNNNGC 2 cut(s) 771, 809
BstNI CCWGG 2 cut(s) 303, 881
BstSCI CCNGG 4 cut(s) 301, 856, 857, 879
BstSFI CTRYAG 1 cut(s) 423
BstUI CGCG 1 cut(s) 1040
BstX2I RGATCY 1 cut(s) 295
BstYI RGATCY 1 cut(s) 295
BsuI GTATCC 1 cut(s) 424
BsuRI GGCC 1 cut(s) 90
BtgI CCRYGG 1 cut(s) 1038
BtsCI GGATG 6 cut(s) 10, 86, 133, 532, 712, 889
Cac8I GCNNGC 2 cut(s) 13, 355
CfoI GCGC 1 cut(s) 232
Cfr10I RCCGGY 1 cut(s) 968
Cfr13I GGNCC 3 cut(s) 88, 197, 561
Cfr42I CCGCGG 1 cut(s) 1041
Cfr9I CCCGGG 1 cut(s) 857
CseI GACGC 1 cut(s) 353
Csp6I GTAC 3 cut(s) 629, 848, 950
CspCI CAANNNNNGTGG 4 cut(s) 256, 291, 539, 574
CviAII CATG 5 cut(s) 85, 342, 524, 766, 819
CviQI GTAC 3 cut(s) 629, 848, 950
DdeI CTNAG 1 cut(s) 780
DpnI GATC 2 cut(s) 297, 387
DpnII GATC 2 cut(s) 295, 385
DriI GACNNNNNGTC 1 cut(s) 59
Eam1104I CTCTTC 2 cut(s) 283, 915
Eam1105I GACNNNNNGTC 1 cut(s) 59
EarI CTCTTC 2 cut(s) 283, 915
Eco130I CCWWGG 4 cut(s) 29, 315, 643, 832
Eco24I GRGCYC 1 cut(s) 523
Eco31I GGTCTC 1 cut(s) 67
Eco47I GGWCC 2 cut(s) 197, 561
Eco57I CTGAAG 3 cut(s) 254, 467, 513
Eco88I CYCGRG 1 cut(s) 857
EcoRII CCWGG 2 cut(s) 301, 879
EcoT14I CCWWGG 4 cut(s) 29, 315, 643, 832
EcoT22I ATGCAT 1 cut(s) 86
EcoT38I GRGCYC 1 cut(s) 523
ErhI CCWWGG 4 cut(s) 29, 315, 643, 832
FaeI CATG 5 cut(s) 88, 345, 527, 769, 822
FalI AAGNNNNNCTT 2 cut(s) 673, 705
FaqI GGGAC 4 cut(s) 66, 547, 624, 874
FatI CATG 5 cut(s) 84, 341, 523, 765, 818
FblI GTMKAC 2 cut(s) 102, 707
FokI GGATG 6 cut(s) 17, 93, 140, 519, 699, 896
FriOI GRGCYC 1 cut(s) 523
FspBI CTAG 4 cut(s) 12, 354, 809, 815
GlaI GCGC 1 cut(s) 231
GsuI CTGGAG 2 cut(s) 117, 309
HaeII RGCGCY 1 cut(s) 233
HaeIII GGCC 1 cut(s) 90
HapII CCGG 3 cut(s) 503, 858, 969
HgaI GACGC 1 cut(s) 353
HhaI GCGC 1 cut(s) 232
Hin1II CATG 5 cut(s) 88, 345, 527, 769, 822
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HincII GTYRAC 1 cut(s) 708
HindII GTYRAC 1 cut(s) 708
HinfI GANTC 5 cut(s) 99, 132, 165, 571, 1034
HpaII CCGG 3 cut(s) 503, 858, 969
HphI GGTGA 3 cut(s) 452, 919, 983
Hpy166II GTNNAC 4 cut(s) 103, 376, 409, 708
Hpy188I TCNGA 2 cut(s) 493, 1046
Hpy188III TCNNGA 6 cut(s) 96, 326, 368, 503, 568, 575
Hpy8I GTNNAC 4 cut(s) 103, 376, 409, 708
HpyAV CCTTC 3 cut(s) 458, 699, 898
HpyCH4V TGCA 5 cut(s) 84, 527, 606, 887, 1003
HpyF10VI GCNNNNNNNGC 2 cut(s) 771, 809
HpyF3I CTNAG 1 cut(s) 780
Hsp92II CATG 5 cut(s) 88, 345, 527, 769, 822
HspAI GCGC 1 cut(s) 230
Kpn2I TCCGGA 1 cut(s) 502
KspI CCGCGG 1 cut(s) 1041
Kzo9I GATC 2 cut(s) 295, 385
LguI GCTCTTC 1 cut(s) 283
LmnI GCTCC 2 cut(s) 610, 902
LweI GCATC 3 cut(s) 71, 874, 984
MaeI CTAG 4 cut(s) 12, 354, 809, 815
MaeIII GTNAC 1 cut(s) 971
MalI GATC 2 cut(s) 297, 387
MbiI CCGCTC 2 cut(s) 293, 339
MboI GATC 2 cut(s) 295, 385
MboII GAAGA 6 cut(s) 300, 460, 473, 599, 754, 932
MflI RGATCY 1 cut(s) 295
MhlI GDGCHC 1 cut(s) 523
MluCI AATT 6 cut(s) 68, 213, 255, 260, 591, 1010
MlyI GAGTC 2 cut(s) 108, 565
MmeI TCCRAC 2 cut(s) 202, 265
Mph1103I ATGCAT 1 cut(s) 86
MroI TCCGGA 1 cut(s) 502
MroXI GAANNNNTTC 2 cut(s) 255, 594
MseI TTAA 2 cut(s) 36, 873
MslI CAYNNNNRTG 3 cut(s) 207, 416, 817
MspA1I CMGCKG 2 cut(s) 185, 1040
MspI CCGG 3 cut(s) 503, 858, 969
MspR9I CCNGG 4 cut(s) 303, 858, 859, 881
MvaI CCWGG 2 cut(s) 303, 881
MvnI CGCG 1 cut(s) 1040
MwoI GCNNNNNNNGC 2 cut(s) 771, 809
NciI CCSGG 2 cut(s) 858, 859
NdeII GATC 2 cut(s) 295, 385
NheI GCTAGC 2 cut(s) 11, 353
NlaIII CATG 5 cut(s) 88, 345, 527, 769, 822
NlaIV GGNNCC 4 cut(s) 297, 420, 563, 898
NmuCI GTSAC 1 cut(s) 971
NsiI ATGCAT 1 cut(s) 86
OliI CACNNNNGTG 1 cut(s) 416
PciSI GCTCTTC 1 cut(s) 283
PdmI GAANNNNTTC 2 cut(s) 255, 594
PfeI GAWTC 3 cut(s) 132, 165, 1034
PflFI GACNNNGTC 1 cut(s) 962
PleI GAGTC 2 cut(s) 107, 565
PpsI GAGTC 2 cut(s) 107, 565
Psp6I CCWGG 2 cut(s) 301, 879
PspGI CCWGG 2 cut(s) 301, 879
PspN4I GGNNCC 4 cut(s) 297, 420, 563, 898
PspPI GGNCC 3 cut(s) 88, 197, 561
PsuI RGATCY 1 cut(s) 295
PsyI GACNNNGTC 1 cut(s) 962
PvuII CAGCTG 1 cut(s) 185
RsaI GTAC 3 cut(s) 630, 849, 951
RsaNI GTAC 3 cut(s) 629, 848, 950
RseI CAYNNNNRTG 3 cut(s) 207, 416, 817
SacII CCGCGG 1 cut(s) 1041
SalI GTCGAC 1 cut(s) 706
SapI GCTCTTC 1 cut(s) 283
SaqAI TTAA 2 cut(s) 36, 873
Sau3AI GATC 2 cut(s) 295, 385
Sau96I GGNCC 3 cut(s) 88, 197, 561
SchI GAGTC 2 cut(s) 108, 565
ScrFI CCNGG 4 cut(s) 303, 858, 859, 881
SduI GDGCHC 1 cut(s) 523
SfaNI GCATC 3 cut(s) 71, 874, 984
SfcI CTRYAG 1 cut(s) 423
Sfr303I CCGCGG 1 cut(s) 1041
SgrAI CRCCGGYG 1 cut(s) 968
SgrBI CCGCGG 1 cut(s) 1041
SinI GGWCC 2 cut(s) 197, 561
SmaI CCCGGG 1 cut(s) 859
SmiMI CAYNNNNRTG 3 cut(s) 207, 416, 817
SmlI CTYRAG 1 cut(s) 56
SmoI CTYRAG 1 cut(s) 56
Sse9I AATT 6 cut(s) 68, 213, 255, 260, 591, 1010
SsiI CCGC 4 cut(s) 293, 337, 1038, 1040
SspMI CTAG 4 cut(s) 12, 354, 809, 815
StyD4I CCNGG 4 cut(s) 301, 856, 857, 879
StyI CCWWGG 4 cut(s) 29, 315, 643, 832
TaqI TCGA 2 cut(s) 707, 957
TasI AATT 6 cut(s) 68, 213, 255, 260, 591, 1010
TfiI GAWTC 3 cut(s) 132, 165, 1034
Tru1I TTAA 2 cut(s) 36, 873
Tru9I TTAA 2 cut(s) 36, 873
TseFI GTSAC 1 cut(s) 971
Tsp45I GTSAC 1 cut(s) 971
TspDTI ATGAA 4 cut(s) 21, 225, 521, 712
TspMI CCCGGG 1 cut(s) 857
Tth111I GACNNNGTC 1 cut(s) 962
VpaK11BI GGWCC 2 cut(s) 197, 561
XapI RAATTY 3 cut(s) 213, 255, 1010
XmaI CCCGGG 1 cut(s) 857
XmiI GTMKAC 2 cut(s) 102, 707
XmnI GAANNNNTTC 2 cut(s) 255, 594
XspI CTAG 4 cut(s) 12, 354, 809, 815
Zsp2I ATGCAT 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.