Prupe.6G141300_v2.0.a1

aldo-keto reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000149
Physical Location & Seq
Reverse (-)
11440260 .. 11443128
2869 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G141300.3

Sequence Viewer

Length: 1038 bp
ATGGCTGAAGATAACACAGTCGAAATTCCTAGAGTTAAATTGGGAAATCAAGGACTTGAGGTCTCAAAATTGGGTTTTGGGTGCATGGGCCTGACTGGAGTCTACAACTCTCCTGTCGCTGATGAGGATGGAATCTCGATAATCAAAGATGCCTTCAGTAAAGGAATCACTTTCTTTGACACATCTGATGTATATGGACCTCATTTGAATGAGGTTCTTGTTGGGAAGGCCTTGAAGCAGTTGCCAAGAGAAAAAATTCAATTAGCCACAAAGTTTGGCATTACAGGAACCGTTGACCCTCCTACTATTGTAATCAAGGGTACTCCTGAGTATGTCCGTTCAGCCTGCGAAGCTAGCTTGAAGCGTCTTGGTGTGGACTACATTGATCTGTATTACCAACATCGGGTGGACACTTCAGTGCCTATAGAGGAAACTATTGGTGAGCTGAAGAAACTGGTGGAAGAAGGGAAAGTAAAGTACATCGGTTTATCAGAAGCTAGCCCGGACACAATAAGGAGGGCACATGCAGTTCATCCCATCACAGCTGTACAAATGGAGTGGTCTCTCTGGACTCGTGATATTGAGGAAGAGATTATTCCACTTTGCAGGGAGCTTGGCATAGGTATAGTTCCATATAGTCCTCTTGGTCGTGGGTTTTTTGGTGGCAAAGCAGTTTTGGAAAGTGTACCTGCAAATAGCTTCTTGGCCTCAAATCCTCGGTTCATAGGCGAGAACTTGGAGAAGAACAAGAACATTTACAATCGAATAGAAAGCCTTGCAAAAAAGCACCAATCATCTCCTGCTCAACTAGCACTAGCGTGGGTTCTCCACCAAGGAGATGATGTTGTGCCCATCCCAGGGACAACAAAGATTAAGAACCTGGATGCAAACATTGGCTCCTTGAGGGTGAAACTTGGAGAAGAGGACCTGAAAGAAGTTTCTGATGCTGTCCCAATCAACCAAGTAGCTGGTGATAGAACTTACTCAGGCATGACGCATTTGCAATGGAACTTTGCCAACACTCCTCCAAAAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

346

Amino Acids

37.85

Weight (kDa)

5.74

Isoelectric Point (pI)

33.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000149)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01550 FvH4_4g01550 FvH4_4g01550 FvH4_6g03001 FvH4_6g03010 FvH4_6g03030 FvH4_6g03050 FvH4_6g03050 FvH4_6g03050 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03052 FvH4_6g03070 FvH4_6g03070 FvH4_6g03110
malus_domestica MD04G1223200.v1.1 MD08G1240600.v1.1 MD12G1239000.v1.1 MD12G1239100.v1.1 MD12G1239200.v1.1 MD12G1239300.v1.1 MD12G1239400.v1.1 MD12G1239600.v1.1 MD12G1239800.v1.1 MD12G1240000.v1.1 MD12G1240300.v1.1 MD12G1240400.v1.1 MD13G1200700.v1.1
prunus_persica Prupe.1G021900_v2.0.a1 Prupe.1G022000_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G341900_v2.0.a1 Prupe.6G342100_v2.0.a1 Prupe.6G342200_v2.0.a1 Prupe.6G342300_v2.0.a1
pyrus_communis pycom04g19710 pycom12g21970 pycom12g21980 pycom12g21990 pycom12g22000 pycom12g22020 pycom13g17420 pycom16g16880
rosa_chinensis RchiOBHm_Chr3g0450451 RchiOBHm_Chr3g0451211 RchiOBHm_Chr3g0451221 RchiOBHm_Chr3g0451251 RchiOBHm_Chr3g0451261 RchiOBHm_Chr3g0451281 RchiOBHm_Chr3g0451321 RchiOBHm_Chr3g0451331 RchiOBHm_Chr3g0451341 RchiOBHm_Chr3g0454931 RchiOBHm_Chr4g0387811 RchiOBHm_Chr4g0387821 RchiOBHm_Chr4g0388101
rosa_laevigata RLG00000010080 RLG00000010092 RLG00000010093 RLG00000025402 RLG00000025666 RLG00000025667 RLG00000025668 RLG00000025669 RLG00000025672 RLG00000025673 RLG00000025674 RLG00000025675 RLG00000025676 RLG00000025678 RLG00000025679 RLG00000025729
rosa_multiflora Rmu_co8283913.1_g000001 Rmu_co8296899.1_g000001 Rmu_sc0000330.1_g000014 Rmu_sc0001792.1_g000004 Rmu_sc0002169.1_g000002 Rmu_sc0002180.1_g000028 Rmu_sc0002509.1_g000009 Rmu_sc0002575.1_g000011 Rmu_sc0002575.1_g000013 Rmu_sc0002575.1_g000015 Rmu_sc0002575.1_g000019 Rmu_sc0002575.1_g000021 Rmu_sc0002575.1_g000022 Rmu_sc0012229.1_g000010 Rmu_sc0012229.1_g000014 Rmu_sc0012229.1_g000017 Rmu_sc0012229.1_g000018 Rmu_sc0013958.1_g000001 Rmu_sc0030279.1_g000001 Rmu_sc0031850.1_g000002
rosa_roxburghii Rroxscaffold_163G00450840 Rroxscaffold_163G00450860 Rroxscaffold_163G00450870 Rroxscaffold_164G00436570 Rroxscaffold_5G00334430 Rroxscaffold_5G00334440 Rroxscaffold_5G00334650 Rroxscaffold_6G00428150 Rroxscaffold_6G00428660 Rroxscaffold_6G00428680 Rroxscaffold_6G00428710 Rroxscaffold_6G00428720 Rroxscaffold_6G00428730 Rroxscaffold_6G00428740 Rroxscaffold_6G00428750 Rroxscaffold_6G00428760
rosa_rugosa Rorug02G0535300 Rorug02G0627900 Rorug02G0632500 Rorug02G0632600 Rorug02G0633000 Rorug02G0633100 Rorug03G0003000 Rorug03G0313700 Rorug03G0314800 Rorug05G0229300 Rorug07G0155500
rosa_samantha Rh3AG028500 Rh3AG035300 Rh3AG035400 Rh3AG035500 Rh3AG035600 Rh3AG035700 Rh3AG035800 Rh3AG035900 Rh3AG062900 Rh3BG029000 Rh3BG035500 Rh3BG035600 Rh3BG035800 Rh3BG035900 Rh3BG036000 Rh3BG036100 Rh3BG036200 Rh3BG036300 Rh3BG036400 Rh3BG036500 Rh3BG036600 Rh3BG064800 Rh3CG027800 Rh3CG034200 Rh3CG034400 Rh3CG034500 Rh3CG034600 Rh3CG034700 Rh3CG034800 Rh3CG034900 Rh3CG063700 Rh3DG035100 Rh3DG035200 Rh3DG035400 Rh3DG035500 Rh3DG035600 Rh3DG035700 Rh3DG035800 Rh3DG035900 Rh3DG036000 Rh3DG036100 Rh3DG064800 Rh4AG018700 Rh4BG013600 Rh4BG013700 Rh4BG014900 Rh4CG021200 Rh4DG015600
rosa_wichuraiana Rw0G001850 Rw3G002200 Rw3G002580 Rw3G002590 Rw3G002610 Rw3G002620 Rw3G002630 Rw3G002640 Rw3G002650 Rw3G002660 Rw3G004920 Rw3G016120 Rw4G001220 Rw4G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 697
AccI GTMKAC 1 cut(s) 102
AcsI RAATTY 2 cut(s) 24, 255
AcuI CTGAAG 4 cut(s) 27, 139, 399, 467
AfaI GTAC 4 cut(s) 322, 479, 549, 687
AfiI CCNNNNNNNGG 3 cut(s) 403, 857, 858
AgsI TTSAA 4 cut(s) 208, 235, 260, 361
AhdI GACNNNNNGTC 1 cut(s) 59
AjnI CCWGG 2 cut(s) 856, 879
AleI CACNNNNGTG 2 cut(s) 416, 817
AluBI AGCT 8 cut(s) 353, 357, 445, 497, 545, 613, 699, 968
AluI AGCT 8 cut(s) 353, 357, 445, 497, 545, 613, 699, 968
Alw26I GTCTC 2 cut(s) 67, 567
AoxI GGCC 3 cut(s) 88, 228, 705
ApoI RAATTY 2 cut(s) 24, 255
Asp700I GAANNNNTTC 1 cut(s) 255
AspS9I GGNCC 3 cut(s) 88, 197, 925
AsuC2I CCSGG 1 cut(s) 503
AsuHPI GGTGA 3 cut(s) 452, 919, 983
AsuNHI GCTAGC 2 cut(s) 353, 497
AvaII GGWCC 2 cut(s) 197, 925
BaeGI GKGCMC 2 cut(s) 523, 852
BauI CACGAG 1 cut(s) 573
BccI CCATC 3 cut(s) 122, 545, 860
BciT130I CCWGG 2 cut(s) 858, 881
BcnI CCSGG 1 cut(s) 503
BcoDI GTCTC 2 cut(s) 67, 567
BfaI CTAG 5 cut(s) 30, 354, 498, 809, 815
BfmI CTRYAG 1 cut(s) 423
BfuAI ACCTGC 1 cut(s) 697
Bme1390I CCNGG 3 cut(s) 503, 858, 881
Bme18I GGWCC 2 cut(s) 197, 925
BmeRI GACNNNNNGTC 1 cut(s) 59
BmgT120I GGNCC 3 cut(s) 88, 197, 925
BmiI GGNNCC 2 cut(s) 289, 898
BmrFI CCNGG 3 cut(s) 503, 858, 881
BmsI GCATC 3 cut(s) 139, 874, 934
BmtI GCTAGC 2 cut(s) 357, 501
BoxI GACNNNNGTC 1 cut(s) 98
BpmI CTGGAG 1 cut(s) 117
BpuEI CTTGAG 2 cut(s) 77, 922
BpuMI CCSGG 1 cut(s) 503
BsaI GGTCTC 2 cut(s) 67, 567
BsaJI CCNNGG 4 cut(s) 716, 832, 856, 857
BsaXI ACNNNNNCTCC 4 cut(s) 828, 858, 881, 911
Bsc4I CCNNNNNNNGG 3 cut(s) 403, 857, 858
Bse1I ACTGG 2 cut(s) 100, 459
Bse3DI GCAATG 1 cut(s) 1010
BseBI CCWGG 2 cut(s) 858, 881
BseDI CCNNGG 4 cut(s) 716, 832, 856, 857
BseGI GGATG 4 cut(s) 133, 532, 852, 889
BseLI CCNNNNNNNGG 3 cut(s) 403, 857, 858
BseMI GCAATG 1 cut(s) 1010
BseMII CTCAG 2 cut(s) 318, 999
BseNI ACTGG 2 cut(s) 100, 459
BseRI GAGGAG 1 cut(s) 1014
BseSI GKGCMC 2 cut(s) 523, 852
BshFI GGCC 3 cut(s) 90, 230, 707
BsiSI CCGG 1 cut(s) 503
BslFI GGGAC 2 cut(s) 874, 935
BslI CCNNNNNNNGG 3 cut(s) 403, 857, 858
BsmAI GTCTC 2 cut(s) 67, 567
BsmFI GGGAC 2 cut(s) 874, 935
BsnI GGCC 3 cut(s) 90, 230, 707
Bso31I GGTCTC 2 cut(s) 67, 567
Bsp1286I GDGCHC 2 cut(s) 523, 852
Bsp1407I TGTACA 1 cut(s) 547
Bsp143I GATC 1 cut(s) 385
BspANI GGCC 3 cut(s) 90, 230, 707
BspCNI CTCAG 2 cut(s) 319, 998
BspLI GGNNCC 2 cut(s) 289, 898
BspMI ACCTGC 1 cut(s) 697
BspOI GCTAGC 2 cut(s) 357, 501
BspTNI GGTCTC 2 cut(s) 67, 567
BsrDI GCAATG 1 cut(s) 1010
BsrGI TGTACA 1 cut(s) 547
BsrI ACTGG 2 cut(s) 100, 459
BssECI CCNNGG 4 cut(s) 716, 832, 856, 857
BssMI GATC 1 cut(s) 385
BssSI CACGAG 1 cut(s) 573
BssT1I CCWWGG 1 cut(s) 832
Bst2BI CACGAG 1 cut(s) 573
Bst2UI CCWGG 2 cut(s) 858, 881
Bst4CI ACNGT 2 cut(s) 19, 292
Bst6I CTCTTC 2 cut(s) 582, 915
BstAUI TGTACA 1 cut(s) 547
BstC8I GCNNGC 3 cut(s) 346, 355, 499
BstDEI CTNAG 2 cut(s) 327, 985
BstF5I GGATG 4 cut(s) 133, 532, 852, 889
BstKTI GATC 1 cut(s) 388
BstMAI GTCTC 2 cut(s) 67, 567
BstMBI GATC 1 cut(s) 385
BstMWI GCNNNNNNNGC 3 cut(s) 350, 354, 809
BstNI CCWGG 2 cut(s) 858, 881
BstNSI RCATGY 1 cut(s) 527
BstPAI GACNNNNGTC 1 cut(s) 98
BstSCI CCNGG 3 cut(s) 501, 856, 879
BstSFI CTRYAG 1 cut(s) 423
BstSLI GKGCMC 2 cut(s) 523, 852
BstXI CCANNNNNNTGG 1 cut(s) 968
BsuRI GGCC 3 cut(s) 90, 230, 707
BtsCI GGATG 4 cut(s) 133, 532, 852, 889
BtsIMutI CAGTG 1 cut(s) 423
BveI ACCTGC 1 cut(s) 697
Cac8I GCNNGC 3 cut(s) 346, 355, 499
Cfr13I GGNCC 3 cut(s) 88, 197, 925
CseI GACGC 2 cut(s) 353, 1003
Csp6I GTAC 4 cut(s) 321, 478, 548, 686
CspCI CAANNNNNGTGG 4 cut(s) 256, 291, 539, 574
CviAII CATG 3 cut(s) 85, 524, 991
CviQI GTAC 4 cut(s) 321, 478, 548, 686
DdeI CTNAG 2 cut(s) 327, 985
DpnI GATC 1 cut(s) 387
DpnII GATC 1 cut(s) 385
DriI GACNNNNNGTC 1 cut(s) 59
Eam1104I CTCTTC 2 cut(s) 582, 915
Eam1105I GACNNNNNGTC 1 cut(s) 59
EarI CTCTTC 2 cut(s) 582, 915
Eco130I CCWWGG 1 cut(s) 832
Eco147I AGGCCT 1 cut(s) 230
Eco31I GGTCTC 2 cut(s) 67, 567
Eco47I GGWCC 2 cut(s) 197, 925
Eco57I CTGAAG 4 cut(s) 27, 139, 399, 467
EcoO109I RGGNCCY 1 cut(s) 925
EcoRII CCWGG 2 cut(s) 856, 879
EcoT14I CCWWGG 1 cut(s) 832
ErhI CCWWGG 1 cut(s) 832
FaeI CATG 3 cut(s) 88, 527, 994
FaqI GGGAC 2 cut(s) 874, 935
FatI CATG 3 cut(s) 84, 523, 990
FblI GTMKAC 1 cut(s) 102
FokI GGATG 4 cut(s) 140, 519, 839, 896
FspBI CTAG 5 cut(s) 30, 354, 498, 809, 815
GsuI CTGGAG 1 cut(s) 117
HaeIII GGCC 3 cut(s) 90, 230, 707
HapII CCGG 1 cut(s) 503
HgaI GACGC 2 cut(s) 353, 1003
Hin1II CATG 3 cut(s) 88, 527, 994
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HinfI GANTC 4 cut(s) 99, 132, 165, 571
HpaII CCGG 1 cut(s) 503
HphI GGTGA 3 cut(s) 452, 919, 983
Hpy166II GTNNAC 5 cut(s) 103, 295, 376, 409, 686
Hpy188I TCNGA 3 cut(s) 187, 493, 943
Hpy188III TCNNGA 4 cut(s) 136, 326, 568, 575
Hpy8I GTNNAC 5 cut(s) 103, 295, 376, 409, 686
HpyAV CCTTC 3 cut(s) 163, 220, 458
HpyCH4III ACNGT 2 cut(s) 19, 292
HpyCH4V TGCA 7 cut(s) 84, 527, 606, 692, 779, 887, 1003
HpyF10VI GCNNNNNNNGC 3 cut(s) 350, 354, 809
HpyF3I CTNAG 2 cut(s) 327, 985
Hsp92II CATG 3 cut(s) 88, 527, 994
Kzo9I GATC 1 cut(s) 385
LmnI GCTCC 2 cut(s) 610, 902
LweI GCATC 3 cut(s) 139, 874, 934
MaeI CTAG 5 cut(s) 30, 354, 498, 809, 815
MalI GATC 1 cut(s) 387
MboI GATC 1 cut(s) 385
MboII GAAGA 6 cut(s) 20, 460, 473, 599, 754, 932
MhlI GDGCHC 2 cut(s) 523, 852
MluCI AATT 5 cut(s) 24, 38, 68, 255, 260
MlyI GAGTC 2 cut(s) 108, 565
MroXI GAANNNNTTC 1 cut(s) 255
MseI TTAA 2 cut(s) 36, 873
MslI CAYNNNNRTG 3 cut(s) 207, 416, 817
MspA1I CMGCKG 1 cut(s) 545
MspI CCGG 1 cut(s) 503
MspR9I CCNGG 3 cut(s) 503, 858, 881
MvaI CCWGG 2 cut(s) 858, 881
MwoI GCNNNNNNNGC 3 cut(s) 350, 354, 809
NciI CCSGG 1 cut(s) 503
NdeII GATC 1 cut(s) 385
NheI GCTAGC 2 cut(s) 353, 497
NlaIII CATG 3 cut(s) 88, 527, 994
NlaIV GGNNCC 2 cut(s) 289, 898
NspI RCATGY 1 cut(s) 527
OliI CACNNNNGTG 2 cut(s) 416, 817
PasI CCCWGGG 1 cut(s) 857
PceI AGGCCT 1 cut(s) 230
PdmI GAANNNNTTC 1 cut(s) 255
PfeI GAWTC 2 cut(s) 132, 165
PleI GAGTC 2 cut(s) 107, 565
PpsI GAGTC 2 cut(s) 107, 565
PpuMI RGGWCCY 1 cut(s) 925
PshAI GACNNNNGTC 1 cut(s) 98
Psp5II RGGWCCY 1 cut(s) 925
Psp6I CCWGG 2 cut(s) 856, 879
PspGI CCWGG 2 cut(s) 856, 879
PspN4I GGNNCC 2 cut(s) 289, 898
PspPI GGNCC 3 cut(s) 88, 197, 925
PspPPI RGGWCCY 1 cut(s) 925
PvuII CAGCTG 1 cut(s) 545
RsaI GTAC 4 cut(s) 322, 479, 549, 687
RsaNI GTAC 4 cut(s) 321, 478, 548, 686
RseI CAYNNNNRTG 3 cut(s) 207, 416, 817
SaqAI TTAA 2 cut(s) 36, 873
Sau3AI GATC 1 cut(s) 385
Sau96I GGNCC 3 cut(s) 88, 197, 925
SchI GAGTC 2 cut(s) 108, 565
ScrFI CCNGG 3 cut(s) 503, 858, 881
SduI GDGCHC 2 cut(s) 523, 852
SfaNI GCATC 3 cut(s) 139, 874, 934
SfcI CTRYAG 1 cut(s) 423
SinI GGWCC 2 cut(s) 197, 925
SmiMI CAYNNNNRTG 3 cut(s) 207, 416, 817
SmlI CTYRAG 2 cut(s) 56, 901
SmoI CTYRAG 2 cut(s) 56, 901
Sse9I AATT 5 cut(s) 24, 38, 68, 255, 260
SseBI AGGCCT 1 cut(s) 230
SspMI CTAG 5 cut(s) 30, 354, 498, 809, 815
StuI AGGCCT 1 cut(s) 230
StyD4I CCNGG 3 cut(s) 501, 856, 879
StyI CCWWGG 1 cut(s) 832
TaaI ACNGT 2 cut(s) 19, 292
TaqI TCGA 3 cut(s) 21, 137, 763
TasI AATT 5 cut(s) 24, 38, 68, 255, 260
TatI WGTACW 2 cut(s) 477, 547
TfiI GAWTC 2 cut(s) 132, 165
Tru1I TTAA 2 cut(s) 36, 873
Tru9I TTAA 2 cut(s) 36, 873
TscAI CASTG 1 cut(s) 423
TspDTI ATGAA 2 cut(s) 521, 712
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 1 cut(s) 423
VpaK11BI GGWCC 2 cut(s) 197, 925
XapI RAATTY 2 cut(s) 24, 255
XceI RCATGY 1 cut(s) 527
XmiI GTMKAC 1 cut(s) 102
XmnI GAANNNNTTC 1 cut(s) 255
XspI CTAG 5 cut(s) 30, 354, 498, 809, 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.