Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NADPH_Ox | PF08414 | 170 - 272 | 1.2e-39 | Respiratory burst NADPH oxidase |
| Ferric_reduct | PF01794 | 441 - 588 | 2.7e-12 | Ferric reductase like transmembrane component |
| FAD_binding_8 | PF08022 | 630 - 745 | 1.7e-36 | FAD-binding domain |
| NAD_binding_6 | PF08030 | 751 - 935 | 1.1e-51 | Ferric reductase NAD binding domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1502, 1610 |
| Acc65I | GGTACC | 1 cut(s) | 1800 |
| AccB1I | GGYRCC | 2 cut(s) | 1800, 2225 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1362 |
| AccBSI | CCGCTC | 2 cut(s) | 456, 525 |
| AccI | GTMKAC | 2 cut(s) | 95, 843 |
| AccII | CGCG | 3 cut(s) | 388, 657, 1298 |
| AccIII | TCCGGA | 1 cut(s) | 527 |
| AclWI | GGATC | 2 cut(s) | 971, 984 |
| AcoI | YGGCCR | 2 cut(s) | 312, 2781 |
| AcsI | RAATTY | 5 cut(s) | 792, 2377, 2720, 2834, 2840 |
| AcuI | CTGAAG | 3 cut(s) | 806, 1925, 2465 |
| AcyI | GRCGYC | 1 cut(s) | 224 |
| AfaI | GTAC | 5 cut(s) | 1043, 1241, 1274, 1802, 2401 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 354, 964, 1362, 1383, 1695, 2147, 2148, 2167 |
| AflII | CTTAAG | 3 cut(s) | 1084, 1805, 2108 |
| AflIII | ACRYGT | 1 cut(s) | 1038 |
| AgeI | ACCGGT | 1 cut(s) | 1339 |
| AhlI | ACTAGT | 1 cut(s) | 2573 |
| AjiI | CACGTC | 1 cut(s) | 78 |
| AjnI | CCWGG | 4 cut(s) | 14, 233, 1099, 1376 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2447, 2479, 2825, 2857 |
| AleI | CACNNNNGTG | 1 cut(s) | 2739 |
| Alw21I | GWGCWC | 5 cut(s) | 260, 342, 1794, 2773, 2856 |
| Alw26I | GTCTC | 4 cut(s) | 727, 1010, 1168, 1298 |
| Alw44I | GTGCAC | 1 cut(s) | 1790 |
| AlwI | GGATC | 2 cut(s) | 971, 984 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 295, 570 |
| Ama87I | CYCGRG | 2 cut(s) | 83, 1382 |
| Aor13HI | TCCGGA | 1 cut(s) | 527 |
| ApaLI | GTGCAC | 1 cut(s) | 1790 |
| ApeKI | GCWGC | 7 cut(s) | 162, 499, 953, 1137, 1433, 1436, 1678 |
| ApoI | RAATTY | 5 cut(s) | 792, 2377, 2720, 2834, 2840 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 115, 147 |
| AseI | ATTAAT | 1 cut(s) | 186 |
| AsiGI | ACCGGT | 1 cut(s) | 1339 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2711 |
| Asp718I | GGTACC | 1 cut(s) | 1800 |
| AspLEI | GCGC | 4 cut(s) | 535, 659, 724, 1298 |
| AspS9I | GGNCC | 7 cut(s) | 33, 46, 541, 727, 1587, 2216, 2620 |
| AsuC2I | CCSGG | 8 cut(s) | 50, 84, 85, 451, 1923, 2003, 2052, 2231 |
| AsuHPI | GGTGA | 6 cut(s) | 133, 193, 1865, 2066, 2102, 2605 |
| AsuII | TTCGAA | 1 cut(s) | 692 |
| AvaI | CYCGRG | 2 cut(s) | 83, 1382 |
| AvaII | GGWCC | 3 cut(s) | 46, 2216, 2620 |
| BaeGI | GKGCMC | 3 cut(s) | 1794, 2003, 2230 |
| BalI | TGGCCA | 2 cut(s) | 314, 2783 |
| BamHI | GGATCC | 1 cut(s) | 976 |
| BanI | GGYRCC | 2 cut(s) | 1800, 2225 |
| BanII | GRGCYC | 5 cut(s) | 10, 260, 342, 490, 508 |
| BauI | CACGAG | 2 cut(s) | 364, 1072 |
| BbsI | GAAGAC | 8 cut(s) | 62, 219, 745, 1271, 1768, 1864, 1892, 2453 |
| Bbv12I | GWGCWC | 5 cut(s) | 260, 342, 1794, 2773, 2856 |
| BbvCI | CCTCAGC | 1 cut(s) | 353 |
| BbvI | GCAGC | 7 cut(s) | 174, 511, 965, 1149, 1420, 1448, 1665 |
| BccI | CCATC | 6 cut(s) | 24, 158, 422, 851, 1482, 2207 |
| BceAI | ACGGC | 2 cut(s) | 226, 658 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1192, 1226 |
| BciT130I | CCWGG | 4 cut(s) | 16, 235, 1101, 1378 |
| BclI | TGATCA | 2 cut(s) | 960, 2536 |
| BcnI | CCSGG | 8 cut(s) | 50, 84, 85, 451, 1923, 2003, 2052, 2231 |
| BcoDI | GTCTC | 4 cut(s) | 727, 1010, 1168, 1298 |
| BcuI | ACTAGT | 1 cut(s) | 2573 |
| BfaI | CTAG | 5 cut(s) | 62, 128, 2478, 2574, 2670 |
| BfmI | CTRYAG | 2 cut(s) | 1051, 1434 |
| BfrI | CTTAAG | 3 cut(s) | 1084, 1805, 2108 |
| BglII | AGATCT | 2 cut(s) | 825, 2530 |
| BlpI | GCTNAGC | 1 cut(s) | 507 |
| Bme18I | GGWCC | 3 cut(s) | 46, 2216, 2620 |
| BmeT110I | CYCGRG | 2 cut(s) | 83, 1382 |
| BmgBI | CACGTC | 1 cut(s) | 78 |
| BmgT120I | GGNCC | 7 cut(s) | 33, 46, 541, 727, 1587, 2216, 2620 |
| BmrI | ACTGGG | 1 cut(s) | 1954 |
| BmsI | GCATC | 5 cut(s) | 586, 709, 2035, 2547, 2584 |
| BmuI | ACTGGG | 1 cut(s) | 1954 |
| BoxI | GACNNNNGTC | 1 cut(s) | 62 |
| BpiI | GAAGAC | 8 cut(s) | 62, 219, 745, 1271, 1768, 1864, 1892, 2453 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 83, 115, 1764, 1796, 2474, 2506 |
| BpmI | CTGGAG | 1 cut(s) | 217 |
| Bpu10I | CCTNAGC | 5 cut(s) | 353, 1367, 2066, 2143, 2165 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 507 |
| Bpu14I | TTCGAA | 1 cut(s) | 692 |
| BpuEI | CTTGAG | 1 cut(s) | 326 |
| BpuMI | CCSGG | 8 cut(s) | 50, 84, 85, 451, 1923, 2003, 2052, 2231 |
| BsaAI | YACGTR | 3 cut(s) | 1041, 1224, 1570 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2535 |
| BsaHI | GRCGYC | 1 cut(s) | 224 |
| BsaI | GGTCTC | 1 cut(s) | 1010 |
| BsaWI | WCCGGW | 4 cut(s) | 527, 1339, 1875, 2244 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2032, 2062, 2392, 2422, 2760, 2790 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 354, 964, 1362, 1383, 1695, 2147, 2148, 2167 |
| Bse118I | RCCGGY | 2 cut(s) | 172, 1339 |
| Bse1I | ACTGG | 9 cut(s) | 76, 1172, 1606, 1708, 1835, 1960, 2099, 2705, 2774 |
| Bse3DI | GCAATG | 3 cut(s) | 592, 1428, 1937 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2535 |
| BseAI | TCCGGA | 1 cut(s) | 527 |
| BseBI | CCWGG | 4 cut(s) | 16, 235, 1101, 1378 |
| BseGI | GGATG | 5 cut(s) | 10, 601, 1824, 2026, 2076 |
| BseJI | GATNNNNATC | 1 cut(s) | 2535 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 354, 964, 1362, 1383, 1695, 2147, 2148, 2167 |
| BseMI | GCAATG | 3 cut(s) | 592, 1428, 1937 |
| BseNI | ACTGG | 9 cut(s) | 76, 1172, 1606, 1708, 1835, 1960, 2099, 2705, 2774 |
| BseRI | GAGGAG | 6 cut(s) | 122, 219, 456, 459, 508, 1541 |
| BseSI | GKGCMC | 3 cut(s) | 1794, 2003, 2230 |
| BseXI | GCAGC | 7 cut(s) | 174, 511, 965, 1149, 1420, 1448, 1665 |
| BseYI | CCCAGC | 3 cut(s) | 724, 1466, 2147 |
| Bsh1236I | CGCG | 3 cut(s) | 388, 657, 1298 |
| Bsh1285I | CGRYCG | 1 cut(s) | 517 |
| BshNI | GGYRCC | 2 cut(s) | 1800, 2225 |
| BshTI | ACCGGT | 1 cut(s) | 1339 |
| BsiEI | CGRYCG | 1 cut(s) | 517 |
| BsiHKAI | GWGCWC | 5 cut(s) | 260, 342, 1794, 2773, 2856 |
| BsiHKCI | CYCGRG | 2 cut(s) | 83, 1382 |
| BslFI | GGGAC | 3 cut(s) | 32, 64, 100 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 354, 964, 1362, 1383, 1695, 2147, 2148, 2167 |
| BsmAI | GTCTC | 4 cut(s) | 727, 1010, 1168, 1298 |
| BsmBI | CGTCTC | 2 cut(s) | 727, 1298 |
| BsmFI | GGGAC | 3 cut(s) | 32, 64, 100 |
| Bso31I | GGTCTC | 1 cut(s) | 1010 |
| BsoBI | CYCGRG | 2 cut(s) | 83, 1382 |
| Bsp119I | TTCGAA | 1 cut(s) | 692 |
| Bsp13I | TCCGGA | 1 cut(s) | 527 |
| Bsp143I | GATC | 9 cut(s) | 514, 799, 825, 888, 960, 976, 1209, 2530, 2536 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 507 |
| Bsp19I | CCATGG | 2 cut(s) | 373, 2616 |
| BspEI | TCCGGA | 1 cut(s) | 527 |
| BspFNI | CGCG | 3 cut(s) | 388, 657, 1298 |
| BspMAI | CTGCAG | 1 cut(s) | 1438 |
| BspPI | GGATC | 2 cut(s) | 971, 984 |
| BspT104I | TTCGAA | 1 cut(s) | 692 |
| BspT107I | GGYRCC | 2 cut(s) | 1800, 2225 |
| BspTI | CTTAAG | 3 cut(s) | 1084, 1805, 2108 |
| BspTNI | GGTCTC | 1 cut(s) | 1010 |
| BsrBI | CCGCTC | 2 cut(s) | 456, 525 |
| BsrDI | GCAATG | 3 cut(s) | 592, 1428, 1937 |
| BsrFI | RCCGGY | 2 cut(s) | 172, 1339 |
| BsrI | ACTGG | 9 cut(s) | 76, 1172, 1606, 1708, 1835, 1960, 2099, 2705, 2774 |
| BssAI | RCCGGY | 2 cut(s) | 172, 1339 |
| BssMI | GATC | 9 cut(s) | 514, 799, 825, 888, 960, 976, 1209, 2530, 2536 |
| BssNI | GRCGYC | 1 cut(s) | 224 |
| BssSI | CACGAG | 2 cut(s) | 364, 1072 |
| BssT1I | CCWWGG | 4 cut(s) | 315, 373, 1290, 2616 |
| Bst2BI | CACGAG | 2 cut(s) | 364, 1072 |
| Bst2UI | CCWGG | 4 cut(s) | 16, 235, 1101, 1378 |
| Bst4CI | ACNGT | 5 cut(s) | 181, 714, 1277, 1894, 1983 |
| Bst6I | CTCTTC | 3 cut(s) | 963, 1166, 2147 |
| BstACI | GRCGYC | 1 cut(s) | 224 |
| BstAFI | CTTAAG | 3 cut(s) | 1084, 1805, 2108 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1143, 2802 |
| BstBAI | YACGTR | 3 cut(s) | 1041, 1224, 1570 |
| BstBI | TTCGAA | 1 cut(s) | 692 |
| BstC8I | GCNNGC | 6 cut(s) | 174, 396, 504, 633, 2162, 2798 |
| BstDSI | CCRYGG | 3 cut(s) | 373, 1768, 2616 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1693 |
| BstF5I | GGATG | 5 cut(s) | 10, 601, 1824, 2026, 2076 |
| BstFNI | CGCG | 3 cut(s) | 388, 657, 1298 |
| BstHHI | GCGC | 4 cut(s) | 535, 659, 724, 1298 |
| BstKTI | GATC | 9 cut(s) | 517, 802, 828, 891, 963, 979, 1212, 2533, 2539 |
| BstMAI | GTCTC | 4 cut(s) | 727, 1010, 1168, 1298 |
| BstMBI | GATC | 9 cut(s) | 514, 799, 825, 888, 960, 976, 1209, 2530, 2536 |
| BstMCI | CGRYCG | 1 cut(s) | 517 |
| BstNI | CCWGG | 4 cut(s) | 16, 235, 1101, 1378 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 62 |
| BstSFI | CTRYAG | 2 cut(s) | 1051, 1434 |
| BstSLI | GKGCMC | 3 cut(s) | 1794, 2003, 2230 |
| BstSNI | TACGTA | 1 cut(s) | 1570 |
| BstUI | CGCG | 3 cut(s) | 388, 657, 1298 |
| BstV1I | GCAGC | 7 cut(s) | 174, 511, 965, 1149, 1420, 1448, 1665 |
| BstV2I | GAAGAC | 8 cut(s) | 62, 219, 745, 1271, 1768, 1864, 1892, 2453 |
| BstX2I | RGATCY | 3 cut(s) | 825, 976, 2530 |
| BstYI | RGATCY | 3 cut(s) | 825, 976, 2530 |
| BtgI | CCRYGG | 3 cut(s) | 373, 1768, 2616 |
| BtgZI | GCGATG | 1 cut(s) | 2607 |
| BtrI | CACGTC | 1 cut(s) | 78 |
| BtsCI | GGATG | 5 cut(s) | 10, 601, 1824, 2026, 2076 |
| BtsIMutI | CAGTG | 5 cut(s) | 69, 1061, 1701, 2003, 2441 |
| Cac8I | GCNNGC | 6 cut(s) | 174, 396, 504, 633, 2162, 2798 |
| CaiI | CAGNNNCTG | 2 cut(s) | 295, 570 |
| CfoI | GCGC | 4 cut(s) | 535, 659, 724, 1298 |
| Cfr10I | RCCGGY | 2 cut(s) | 172, 1339 |
| Cfr13I | GGNCC | 7 cut(s) | 33, 46, 541, 727, 1587, 2216, 2620 |
| Cfr9I | CCCGGG | 1 cut(s) | 83 |
| CseI | GACGC | 5 cut(s) | 67, 133, 154, 213, 372 |
| Csp6I | GTAC | 5 cut(s) | 1042, 1240, 1273, 1801, 2400 |
| CspAI | ACCGGT | 1 cut(s) | 1339 |
| CviQI | GTAC | 5 cut(s) | 1042, 1240, 1273, 1801, 2400 |
| DpnI | GATC | 9 cut(s) | 516, 801, 827, 890, 962, 978, 1211, 2532, 2538 |
| DpnII | GATC | 9 cut(s) | 514, 799, 825, 888, 960, 976, 1209, 2530, 2536 |
| DraI | TTTAAA | 1 cut(s) | 1966 |
| EaeI | YGGCCR | 2 cut(s) | 312, 2781 |
| Eam1104I | CTCTTC | 3 cut(s) | 963, 1166, 2147 |
| EarI | CTCTTC | 3 cut(s) | 963, 1166, 2147 |
| EciI | GGCGGA | 5 cut(s) | 119, 268, 447, 453, 1678 |
| Ecl136II | GAGCTC | 2 cut(s) | 258, 340 |
| Eco105I | TACGTA | 1 cut(s) | 1570 |
| Eco130I | CCWWGG | 4 cut(s) | 315, 373, 1290, 2616 |
| Eco147I | AGGCCT | 2 cut(s) | 1104, 2695 |
| Eco24I | GRGCYC | 5 cut(s) | 10, 260, 342, 490, 508 |
| Eco31I | GGTCTC | 1 cut(s) | 1010 |
| Eco47I | GGWCC | 3 cut(s) | 46, 2216, 2620 |
| Eco53kI | GAGCTC | 2 cut(s) | 258, 340 |
| Eco57I | CTGAAG | 3 cut(s) | 806, 1925, 2465 |
| Eco88I | CYCGRG | 2 cut(s) | 83, 1382 |
| EcoICRI | GAGCTC | 2 cut(s) | 258, 340 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1693 |
| EcoO109I | RGGNCCY | 1 cut(s) | 541 |
| EcoRI | GAATTC | 1 cut(s) | 2840 |
| EcoRII | CCWGG | 4 cut(s) | 14, 233, 1099, 1376 |
| EcoT14I | CCWWGG | 4 cut(s) | 315, 373, 1290, 2616 |
| EcoT22I | ATGCAT | 4 cut(s) | 601, 677, 1625, 1717 |
| EcoT38I | GRGCYC | 5 cut(s) | 10, 260, 342, 490, 508 |
| ErhI | CCWWGG | 4 cut(s) | 315, 373, 1290, 2616 |
| Esp3I | CGTCTC | 2 cut(s) | 727, 1298 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 756, 788, 2840 |
| FaqI | GGGAC | 3 cut(s) | 32, 64, 100 |
| FauI | CCCGC | 3 cut(s) | 381, 495, 530 |
| FbaI | TGATCA | 2 cut(s) | 960, 2536 |
| FblI | GTMKAC | 2 cut(s) | 95, 843 |
| FokI | GGATG | 4 cut(s) | 608, 1831, 2013, 2063 |
| FriOI | GRGCYC | 5 cut(s) | 10, 260, 342, 490, 508 |
| FspBI | CTAG | 5 cut(s) | 62, 128, 2478, 2574, 2670 |
| GlaI | GCGC | 4 cut(s) | 534, 658, 723, 1297 |
| GsaI | CCCAGC | 3 cut(s) | 728, 1470, 2151 |
| GsuI | CTGGAG | 1 cut(s) | 217 |
| HgaI | GACGC | 5 cut(s) | 67, 133, 154, 213, 372 |
| HhaI | GCGC | 4 cut(s) | 535, 659, 724, 1298 |
| Hin1I | GRCGYC | 1 cut(s) | 224 |
| Hin6I | GCGC | 4 cut(s) | 533, 657, 722, 1296 |
| HinP1I | GCGC | 4 cut(s) | 533, 657, 722, 1296 |
| HincII | GTYRAC | 2 cut(s) | 844, 2604 |
| HindII | GTYRAC | 2 cut(s) | 844, 2604 |
| HindIII | AAGCTT | 2 cut(s) | 2201, 2798 |
| HphI | GGTGA | 6 cut(s) | 133, 193, 1865, 2066, 2102, 2605 |
| Hpy166II | GTNNAC | 6 cut(s) | 96, 844, 1792, 1979, 2074, 2604 |
| Hpy8I | GTNNAC | 6 cut(s) | 96, 844, 1792, 1979, 2074, 2604 |
| Hpy99I | CGWCG | 5 cut(s) | 119, 170, 181, 247, 388 |
| HpyAV | CCTTC | 8 cut(s) | 532, 688, 925, 1104, 1586, 1699, 1900, 2582 |
| HpyCH4III | ACNGT | 5 cut(s) | 181, 714, 1277, 1894, 1983 |
| HpyCH4IV | ACGT | 5 cut(s) | 77, 1040, 1223, 1307, 1569 |
| HpySE526I | ACGT | 5 cut(s) | 77, 1040, 1223, 1307, 1569 |
| Hsp92I | GRCGYC | 1 cut(s) | 224 |
| HspAI | GCGC | 4 cut(s) | 533, 657, 722, 1296 |
| Kpn2I | TCCGGA | 1 cut(s) | 527 |
| KpnI | GGTACC | 1 cut(s) | 1804 |
| KroI | GCCGGC | 1 cut(s) | 172 |
| KroNI | GCCGGC | 1 cut(s) | 174 |
| Ksp22I | TGATCA | 2 cut(s) | 960, 2536 |
| Kzo9I | GATC | 9 cut(s) | 514, 799, 825, 888, 960, 976, 1209, 2530, 2536 |
| Lsp1109I | GCAGC | 7 cut(s) | 174, 511, 965, 1149, 1420, 1448, 1665 |
| LweI | GCATC | 5 cut(s) | 586, 709, 2035, 2547, 2584 |
| MaeI | CTAG | 5 cut(s) | 62, 128, 2478, 2574, 2670 |
| MaeII | ACGT | 5 cut(s) | 77, 1040, 1223, 1307, 1569 |
| MaeIII | GTNAC | 6 cut(s) | 121, 1335, 1597, 1706, 2090, 2473 |
| MalI | GATC | 9 cut(s) | 516, 801, 827, 890, 962, 978, 1211, 2532, 2538 |
| MbiI | CCGCTC | 2 cut(s) | 456, 525 |
| MboI | GATC | 9 cut(s) | 514, 799, 825, 888, 960, 976, 1209, 2530, 2536 |
| MfeI | CAATTG | 1 cut(s) | 1010 |
| MflI | RGATCY | 3 cut(s) | 825, 976, 2530 |
| MlsI | TGGCCA | 2 cut(s) | 314, 2783 |
| MluNI | TGGCCA | 2 cut(s) | 314, 2783 |
| MlyI | GAGTC | 6 cut(s) | 35, 101, 461, 1170, 1782, 1878 |
| MmeI | TCCRAC | 2 cut(s) | 288, 954 |
| Mox20I | TGGCCA | 2 cut(s) | 314, 2783 |
| Mph1103I | ATGCAT | 4 cut(s) | 601, 677, 1625, 1717 |
| MroI | TCCGGA | 1 cut(s) | 527 |
| MroNI | GCCGGC | 1 cut(s) | 172 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2711 |
| MscI | TGGCCA | 2 cut(s) | 314, 2783 |
| MseI | TTAA | 8 cut(s) | 186, 1085, 1581, 1674, 1806, 1965, 2109, 2207 |
| MslI | CAYNNNNRTG | 5 cut(s) | 378, 680, 2555, 2615, 2739 |
| Msp20I | TGGCCA | 2 cut(s) | 314, 2783 |
| MspA1I | CMGCKG | 1 cut(s) | 502 |
| MspCI | CTTAAG | 3 cut(s) | 1084, 1805, 2108 |
| MunI | CAATTG | 1 cut(s) | 1010 |
| MvaI | CCWGG | 4 cut(s) | 16, 235, 1101, 1378 |
| MvnI | CGCG | 3 cut(s) | 388, 657, 1298 |
| NaeI | GCCGGC | 1 cut(s) | 174 |
| NciI | CCSGG | 8 cut(s) | 50, 84, 85, 451, 1923, 2003, 2052, 2231 |
| NcoI | CCATGG | 2 cut(s) | 373, 2616 |
| NdeII | GATC | 9 cut(s) | 514, 799, 825, 888, 960, 976, 1209, 2530, 2536 |
| NgoMIV | GCCGGC | 1 cut(s) | 172 |
| NmeAIII | GCCGAG | 4 cut(s) | 80, 235, 373, 449 |
| NmuCI | GTSAC | 3 cut(s) | 121, 1597, 2090 |
| NsiI | ATGCAT | 4 cut(s) | 601, 677, 1625, 1717 |
| NspV | TTCGAA | 1 cut(s) | 692 |
| OliI | CACNNNNGTG | 1 cut(s) | 2739 |
| PceI | AGGCCT | 2 cut(s) | 1104, 2695 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 774, 840 |
| PdiI | GCCGGC | 1 cut(s) | 174 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2711 |
| PfeI | GAWTC | 9 cut(s) | 273, 689, 756, 812, 1131, 1514, 1860, 2354, 2405 |
| PflFI | GACNNNGTC | 3 cut(s) | 44, 91, 839 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1362 |
| PfoI | TCCNGGA | 2 cut(s) | 48, 1921 |
| PinAI | ACCGGT | 1 cut(s) | 1339 |
| Ple19I | CGATCG | 1 cut(s) | 517 |
| PleI | GAGTC | 6 cut(s) | 35, 100, 461, 1170, 1781, 1877 |
| PpsI | GAGTC | 6 cut(s) | 35, 100, 461, 1170, 1781, 1877 |
| Ppu21I | YACGTR | 3 cut(s) | 1041, 1224, 1570 |
| PshAI | GACNNNNGTC | 1 cut(s) | 62 |
| PshBI | ATTAAT | 1 cut(s) | 186 |
| PsiI | TTATAA | 2 cut(s) | 1502, 1610 |
| Psp124BI | GAGCTC | 2 cut(s) | 260, 342 |
| Psp6I | CCWGG | 4 cut(s) | 14, 233, 1099, 1376 |
| PspFI | CCCAGC | 3 cut(s) | 724, 1466, 2147 |
| PspGI | CCWGG | 4 cut(s) | 14, 233, 1099, 1376 |
| PspPI | GGNCC | 7 cut(s) | 33, 46, 541, 727, 1587, 2216, 2620 |
| PstI | CTGCAG | 1 cut(s) | 1438 |
| PstNI | CAGNNNCTG | 2 cut(s) | 295, 570 |
| PsuI | RGATCY | 3 cut(s) | 825, 976, 2530 |
| PsyI | GACNNNGTC | 3 cut(s) | 44, 91, 839 |
| PvuI | CGATCG | 1 cut(s) | 517 |
| RsaI | GTAC | 5 cut(s) | 1043, 1241, 1274, 1802, 2401 |
| RsaNI | GTAC | 5 cut(s) | 1042, 1240, 1273, 1801, 2400 |
| RseI | CAYNNNNRTG | 5 cut(s) | 378, 680, 2555, 2615, 2739 |
| SacI | GAGCTC | 2 cut(s) | 260, 342 |
| SalI | GTCGAC | 1 cut(s) | 842 |
| SaqAI | TTAA | 8 cut(s) | 186, 1085, 1581, 1674, 1806, 1965, 2109, 2207 |
| Sau3AI | GATC | 9 cut(s) | 514, 799, 825, 888, 960, 976, 1209, 2530, 2536 |
| Sau96I | GGNCC | 7 cut(s) | 33, 46, 541, 727, 1587, 2216, 2620 |
| SchI | GAGTC | 6 cut(s) | 35, 101, 461, 1170, 1782, 1878 |
| SfaNI | GCATC | 5 cut(s) | 586, 709, 2035, 2547, 2584 |
| SfcI | CTRYAG | 2 cut(s) | 1051, 1434 |
| SfuI | TTCGAA | 1 cut(s) | 692 |
| SinI | GGWCC | 3 cut(s) | 46, 2216, 2620 |
| SmaI | CCCGGG | 1 cut(s) | 85 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 378, 680, 2555, 2615, 2739 |
| SmlI | CTYRAG | 4 cut(s) | 341, 1084, 1805, 2108 |
| SmoI | CTYRAG | 4 cut(s) | 341, 1084, 1805, 2108 |
| SnaBI | TACGTA | 1 cut(s) | 1570 |
| SpeI | ACTAGT | 1 cut(s) | 2573 |
| SseBI | AGGCCT | 2 cut(s) | 1104, 2695 |
| SspI | AATATT | 2 cut(s) | 190, 2329 |
| SspMI | CTAG | 5 cut(s) | 62, 128, 2478, 2574, 2670 |
| SstI | GAGCTC | 2 cut(s) | 260, 342 |
| StuI | AGGCCT | 2 cut(s) | 1104, 2695 |
| StyI | CCWWGG | 4 cut(s) | 315, 373, 1290, 2616 |
| TaaI | ACNGT | 5 cut(s) | 181, 714, 1277, 1894, 1983 |
| TaiI | ACGT | 5 cut(s) | 80, 1043, 1226, 1310, 1572 |
| TaqII | GACCGA | 2 cut(s) | 34, 2589 |
| TatI | WGTACW | 2 cut(s) | 1239, 2399 |
| TauI | GCSGC | 3 cut(s) | 401, 482, 1301 |
| TfiI | GAWTC | 9 cut(s) | 273, 689, 756, 812, 1131, 1514, 1860, 2354, 2405 |
| Tru1I | TTAA | 8 cut(s) | 186, 1085, 1581, 1674, 1806, 1965, 2109, 2207 |
| Tru9I | TTAA | 8 cut(s) | 186, 1085, 1581, 1674, 1806, 1965, 2109, 2207 |
| TscAI | CASTG | 5 cut(s) | 76, 1068, 1708, 2003, 2448 |
| TseFI | GTSAC | 3 cut(s) | 121, 1597, 2090 |
| TseI | GCWGC | 7 cut(s) | 162, 499, 953, 1137, 1433, 1436, 1678 |
| Tsp45I | GTSAC | 3 cut(s) | 121, 1597, 2090 |
| TspDTI | ATGAA | 8 cut(s) | 550, 698, 867, 1250, 2190, 2287, 2531, 2535 |
| TspGWI | ACGGA | 5 cut(s) | 1785, 1819, 1886, 2019, 2069 |
| TspMI | CCCGGG | 1 cut(s) | 83 |
| TspRI | CASTG | 5 cut(s) | 76, 1068, 1708, 2003, 2448 |
| Tth111I | GACNNNGTC | 3 cut(s) | 44, 91, 839 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1362 |
| Vha464I | CTTAAG | 3 cut(s) | 1084, 1805, 2108 |
| VneI | GTGCAC | 1 cut(s) | 1790 |
| VpaK11BI | GGWCC | 3 cut(s) | 46, 2216, 2620 |
| VspI | ATTAAT | 1 cut(s) | 186 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1693 |
| XapI | RAATTY | 5 cut(s) | 792, 2377, 2720, 2834, 2840 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2642 |
| XmaI | CCCGGG | 1 cut(s) | 83 |
| XmiI | GTMKAC | 2 cut(s) | 95, 843 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2711 |
| XspI | CTAG | 5 cut(s) | 62, 128, 2478, 2574, 2670 |
| Zsp2I | ATGCAT | 4 cut(s) | 601, 677, 1625, 1717 |