Rorug02G0466200

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
59742712 .. 59793243
50532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0466200.1

Sequence Viewer

Length: 2853 bp
ATGACGGAGAAGTCATGCACCCTCCTGGTCCACTTCGACAAGGGCACGCCGGCCCTTGCCAACGAGATCAAAGAAGCTCTCGAAGGAAACGACGTCGAAGCCAAGATCGAAGCCCTCAAGCAAGCAATCATGCTCTTGCTCAACGGCGACACCATTCCCCAGCTCTTCATCATCATTATCCGCTACGTCCTTCCCTCCGAGGACCACACCGTCCAGAAGCTTCTCCTCCTCTACCTCGAGATCATTGACAAGAAAGACTCCCGAGGCAAGGTCCTGCCGGAGATGATCCTCATCTGCCAGAACCTCCGCAACAATCTCCAGAGCCCTAACGAGTACATCCGCGGCGTCACGCTCCGGTTCCTCTGCCGGTTGAACGAGTCCGAGATCATCGAGCCGTTGATCCCTTCGATTCTGGCCAACCTGGAGCACCGCCACCCGTTCGTTCGACGAAACGCCGTCAGCGCAGTCATGTCTGTGTATAGGCTTCCGCACGGTGAGCAAATGCTGGTGGATGCGCCGGAGATTATCGATCGGTTCTTGGCTTCCGAGCATGATCCTTCTAGTAAGCGAAACGCGTTTCTTATGCTGTTTAATTGTGCGCAGGATAGAGCTGTCAGCTATTTGTTTTCTCATATCGATAGGATTGCTGATTGGGGCGAGCAACTCCAAATGGTTGTGTTGGAATTGATTAGGAAGGTTTGTAGAGTCAATAAGGGTGAGAAGGGGAAGTACATTAAGGTCATTATATCATTGCTTAATGCTCAGTCCAGTGCTGTTGTTTACGAGTGTGCCAATACGCTTGTGTCTTTATCGTCTGCCCCGACTGCGATTCGGGCTGCAGCCAATACGTATTGTCAGTTGTTATTATCGCAGAGTGATAACAATGTGAAGTTGATTGTGCTCGATAGGATTAATGAGCTTAAGTCTTCGCATAGGGAGATTCTGGTTGAGTTGGTTATGGATGTGCTGAGGGTACTTTCGAGCCCAAATCTTGATATTAGGAGGAAAACACTTGATATTGTTCTTGAGTTGATTACTCCGAGAAATATTGATGAGGTTGTGATGATGTTGAAGAAGGAGGTCGTCAAGACTCAGAGTGGTGAGCTTGAGAAGAATGGGGAATACAGGCAGATGCTGGTGCAAGCTATATATTCATGTGCGGTTAAGTTTCCGGAGGTGGCGAGCACAGTGGTGCATCCTTTGATGGATTTCTTGGGCGATACTAATGTGGCTTCGGCCTTGGATGTTGCTATTTTTGTGCGTGAGATAATTGAAACCAATCCCAAGCTGCGTGTTTCAATAATAATGAGGCTGTTGGACACTTTCTACCAGATTCGGACTTCCAGGGTGTGTACTTATGCTCTTTGGATTATTGGGGAGTATTGTCTGTCACTTTCTGAGGTTGAGAGTGGGATTGCAACCATTAAGCAGTGTCTTGGGGAGCTCCCATTTTACACCGCTTCTGAGGAAAGCGAGGCACAAGATGTTTCGAAGAATTCTCAGGTGGTAAACTCATCTACTGTGTCTTCCAGGAGACCTGTAGTCCTTGCAGATGGGACCTATGCTACCCAGTCTGCTGCACTGGAAACTGCTATGTCTGCACCTGTCCTTGTTCAAGGATCTTTGGCTTCTGTAGGCAACTTGAGATCATTGATTCTCTCAGGTGACTTTTTCCTGGAGTCAGTTGTGGCTTGCACTTTAACGAAGCTTGTTTTGAGACTAGATGAGGTCCAGCCTTCTAAAGTTGAAGTTAACAAGGCAACCACACAGGCTTTGTTGATCATGGTGTCCATGCTGCAACTGGGTCAATCATCAGTCCTTCCACATCCAATTGATAATGATTCTCATGACAGAATTGTTCTTTGCATCCGTACACTATGCAATAAAGATGAAGAAGTGAAGAAGATATGGTTAAAGTCTTGTAGAGAGAGTTTTGTTAAAATGCTTGAAGATAAGAAGCTTCGGGAAATAGAGGAAAGTAGAGCTATGGCGCAGATATCAAATGCACAACCAGATGACCTTATTGATTTCTACCATCTGAAGAGCAGAAAGGGTATGAGCCAGCTTGAGTTGGAAGATGAGGTTCAAGATGATCTCAAACGTGCTACTGGAGAGTTTGTAAAGGATGGAGATGATGCAAATAAACTCAACCGCATTCTTCAGCTCACAGGATTCAGCGATCCTGTTTATGCTGAAGCCTATGTTACAGTTAATCATTATGACATTGTTCTCGATGTTACCGTCATCAACCGAACCAAGGGAACCCTTCAGAATTTGTGCTTGGAGTTGGCCACGATGGGCGATCTCAAACTTGTTGAGCGTCCTCAGAACTATACACTAGCTCCAGAGTCAACCAAACAGATAAAGGCAAACATTAAGGTCTCCTCAACTGAAACAGGAGTTATATTTGGTAACATTGTTTATGAGACGTCAAATGTGCTTGAGAGAACAGTTATTGTTCTTAATGACATCCATATTGATATAATGGATTACATCTCTCCTTCTTCATGTGCTGATGTGTTGTTTCGGACAATGTGGGCTGAGTTTGAATGGGAAAATAAGGTTGCTATAAGTACTGTTATCAAAGACGAGAAGGACTTTCTGAACCACATCGTTAAAGCAACTAACATGAAGTGCCTGACTCCACCATCGGCACTGGGAGGAGAGTGTGGAGTCCTCGCTGCCAATCTGTATGCAAAGAGTGTTTTCGGGGAGGATGCTTTGGTGAATGTGAGTGTTGAGAAACAAGCAGATGGTAAGCTAAGTGGATACATCAGAATTAGAAGCAAGACTCAAGGTATTGCCCTGAGTCTTGGGGACAAGATCACCTTGAAACAGAAGGGCGGCCCTTGA

Protein Analysis

950

Amino Acids

106.1

Weight (kDa)

5.58

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 21 - 525 6.7e-92 Adaptin N terminal region
Cnd1 PF12717 113 - 265 2.2e-06 non-SMC mitotic condensation complex subunit 1
Coatamer_beta_C PF07718 671 - 809 6.4e-55 Coatomer beta C-terminal region
Coatomer_b_Cpla PF14806 815 - 942 2.3e-55 Coatomer beta subunit appendage platform
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 10, 209
AatII GACGTC 2 cut(s) 96, 2432
Acc16I TGCGCA 1 cut(s) 600
AccII CGCG 2 cut(s) 342, 575
AccIII TCCGGA 1 cut(s) 1171
AclWI GGATC 5 cut(s) 280, 394, 548, 1627, 2174
AcoI YGGCCR 2 cut(s) 414, 2289
AcsI RAATTY 2 cut(s) 1495, 2272
AcuI CTGAAG 4 cut(s) 2060, 2144, 2214, 2252
AcyI GRCGYC 3 cut(s) 93, 345, 2429
AfaI GTAC 6 cut(s) 335, 731, 975, 1354, 1873, 2575
AfiI CCNNNNNNNGG 2 cut(s) 268, 2257
AflII CTTAAG 1 cut(s) 920
AflIII ACRYGT 1 cut(s) 573
AhdI GACNNNNNGTC 1 cut(s) 1541
AjnI CCWGG 5 cut(s) 24, 420, 1343, 1529, 1674
AjuI GAANNNNNNNTTGG 2 cut(s) 2264, 2296
AleI CACNNNNGTG 1 cut(s) 1190
Alw21I GWGCWC 4 cut(s) 429, 903, 1187, 1446
Alw26I GTCTC 4 cut(s) 1528, 1711, 2386, 2420
AlwI GGATC 5 cut(s) 280, 394, 548, 1627, 2174
AlwNI CAGNNNCTG 1 cut(s) 1135
Ama87I CYCGRG 2 cut(s) 236, 261
Aor13HI TCCGGA 1 cut(s) 1171
AoxI GGCC 5 cut(s) 51, 414, 1236, 2289, 2845
ApeKI GCWGC 6 cut(s) 836, 839, 1288, 1577, 1795, 2681
ApoI RAATTY 2 cut(s) 1495, 2272
AseI ATTAAT 1 cut(s) 912
AspLEI GCGC 4 cut(s) 464, 517, 601, 1993
AspS9I GGNCC 7 cut(s) 28, 52, 202, 271, 1557, 1729, 2846
AsuHPI GGTGA 6 cut(s) 506, 728, 1112, 1676, 2737, 2818
AsuII TTCGAA 1 cut(s) 1490
AvaI CYCGRG 2 cut(s) 236, 261
AvaII GGWCC 5 cut(s) 28, 202, 271, 1557, 1729
BaeGI GKGCMC 1 cut(s) 47
BaeI ACNNNNGTAYC 2 cut(s) 1212, 1245
BalI TGGCCA 2 cut(s) 416, 2291
BanII GRGCYC 3 cut(s) 326, 986, 1446
BarI GAAGNNNNNNTAC 2 cut(s) 713, 745
BbsI GAAGAC 2 cut(s) 918, 1518
Bbv12I GWGCWC 4 cut(s) 429, 903, 1187, 1446
BbvCI CCTCAGC 1 cut(s) 968
BbvI GCAGC 6 cut(s) 823, 851, 1275, 1564, 1782, 2668
BccI CCATC 7 cut(s) 1198, 1547, 2043, 2120, 2290, 2656, 2747
BceAI ACGGC 3 cut(s) 160, 379, 440
BcgI CGANNNNNNTGC 2 cut(s) 626, 660
BciT130I CCWGG 5 cut(s) 26, 422, 1345, 1531, 1676
BciVI GTATCC 1 cut(s) 2762
BclI TGATCA 1 cut(s) 1779
BcoDI GTCTC 4 cut(s) 1528, 1711, 2386, 2420
BfaI CTAG 3 cut(s) 561, 1721, 2339
BfmI CTRYAG 3 cut(s) 837, 1539, 1632
BfrI CTTAAG 1 cut(s) 920
BfuI GTATCC 1 cut(s) 2762
BisI GCNGC 8 cut(s) 343, 837, 840, 1289, 1578, 1796, 2682, 2845
BlsI GCNGC 8 cut(s) 344, 838, 841, 1290, 1579, 1797, 2683, 2846
BmcAI AGTACT 1 cut(s) 2575
Bme1390I CCNGG 5 cut(s) 26, 422, 1345, 1531, 1676
Bme18I GGWCC 5 cut(s) 28, 202, 271, 1557, 1729
BmeRI GACNNNNNGTC 1 cut(s) 1541
BmeT110I CYCGRG 2 cut(s) 236, 261
BmgT120I GGNCC 7 cut(s) 28, 52, 202, 271, 1557, 1729, 2846
BmiI GGNNCC 3 cut(s) 359, 1558, 2263
BmrFI CCNGG 5 cut(s) 26, 422, 1345, 1531, 1676
BmrI ACTGGG 3 cut(s) 1564, 1811, 2666
BmsI GCATC 6 cut(s) 502, 1122, 1204, 1875, 2125, 2707
BmuI ACTGGG 3 cut(s) 1564, 1811, 2666
BpiI GAAGAC 2 cut(s) 918, 1518
BpmI CTGGAG 5 cut(s) 302, 443, 1697, 2130, 2328
Bpu10I CCTNAGC 1 cut(s) 968
Bpu14I TTCGAA 1 cut(s) 1490
BpuEI CTTGAG 7 cut(s) 101, 1046, 1127, 1663, 2087, 2462, 2778
Bsa29I ATCGAT 2 cut(s) 528, 636
BsaAI YACGTR 1 cut(s) 849
BsaBI GATNNNNATC 1 cut(s) 290
BsaHI GRCGYC 3 cut(s) 93, 345, 2429
BsaI GGTCTC 2 cut(s) 1528, 2386
BsaJI CCNNGG 6 cut(s) 198, 262, 340, 1239, 1344, 2256
BsaWI WCCGGW 2 cut(s) 354, 1171
BsaXI ACNNNNNCTCC 4 cut(s) 2103, 2133, 2326, 2356
Bsc4I CCNNNNNNNGG 2 cut(s) 268, 2257
Bse118I RCCGGY 2 cut(s) 49, 366
Bse1I ACTGG 6 cut(s) 768, 1570, 1587, 1806, 2113, 2661
Bse3DI GCAATG 1 cut(s) 749
Bse8I GATNNNNATC 1 cut(s) 290
BseAI TCCGGA 1 cut(s) 1171
BseBI CCWGG 5 cut(s) 26, 422, 1345, 1531, 1676
BseCI ATCGAT 2 cut(s) 528, 636
BseDI CCNNGG 6 cut(s) 198, 262, 340, 1239, 1344, 2256
BseJI GATNNNNATC 1 cut(s) 290
BseLI CCNNNNNNNGG 2 cut(s) 268, 2257
BseMI GCAATG 1 cut(s) 749
BseNI ACTGG 6 cut(s) 768, 1570, 1587, 1806, 2113, 2661
BseRI GAGGAG 4 cut(s) 215, 218, 2374, 2676
BseSI GKGCMC 1 cut(s) 47
BseXI GCAGC 6 cut(s) 823, 851, 1275, 1564, 1782, 2668
BseYI CCCAGC 1 cut(s) 159
BsgI GTGCAG 2 cut(s) 1563, 1584
Bsh1236I CGCG 2 cut(s) 342, 575
Bsh1285I CGRYCG 1 cut(s) 532
BshFI GGCC 5 cut(s) 53, 416, 1238, 2291, 2847
BshVI ATCGAT 2 cut(s) 528, 636
BsiEI CGRYCG 1 cut(s) 532
BsiHKAI GWGCWC 4 cut(s) 429, 903, 1187, 1446
BsiHKCI CYCGRG 2 cut(s) 236, 261
BsiSI CCGG 6 cut(s) 50, 278, 355, 367, 518, 1172
BslFI GGGAC 2 cut(s) 1570, 2831
BslI CCNNNNNNNGG 2 cut(s) 268, 2257
BsmAI GTCTC 4 cut(s) 1528, 1711, 2386, 2420
BsmBI CGTCTC 1 cut(s) 2420
BsmFI GGGAC 2 cut(s) 1570, 2831
BsmI GAATGC 1 cut(s) 2154
BsnI GGCC 5 cut(s) 53, 416, 1238, 2291, 2847
Bso31I GGTCTC 2 cut(s) 1528, 2386
BsoBI CYCGRG 2 cut(s) 236, 261
Bsp119I TTCGAA 1 cut(s) 1490
Bsp1286I GDGCHC 7 cut(s) 47, 326, 429, 903, 986, 1187, 1446
Bsp13I TCCGGA 1 cut(s) 1171
BspANI GGCC 5 cut(s) 53, 416, 1238, 2291, 2847
BspDI ATCGAT 2 cut(s) 528, 636
BspEI TCCGGA 1 cut(s) 1171
BspFNI CGCG 2 cut(s) 342, 575
BspHI TCATGA 1 cut(s) 1846
BspLI GGNNCC 3 cut(s) 359, 1558, 2263
BspMAI CTGCAG 1 cut(s) 841
BspPI GGATC 5 cut(s) 280, 394, 548, 1627, 2174
BspQI GCTCTTC 2 cut(s) 170, 2036
BspT104I TTCGAA 1 cut(s) 1490
BspTI CTTAAG 1 cut(s) 920
BspTNI GGTCTC 2 cut(s) 1528, 2386
BsrDI GCAATG 1 cut(s) 749
BsrFI RCCGGY 2 cut(s) 49, 366
BsrI ACTGG 6 cut(s) 768, 1570, 1587, 1806, 2113, 2661
BssAI RCCGGY 2 cut(s) 49, 366
BssECI CCNNGG 6 cut(s) 198, 262, 340, 1239, 1344, 2256
BssNI GRCGYC 3 cut(s) 93, 345, 2429
BssT1I CCWWGG 2 cut(s) 1239, 2256
Bst2UI CCWGG 5 cut(s) 26, 422, 1345, 1531, 1676
Bst4CI ACNGT 8 cut(s) 211, 494, 1189, 1522, 2209, 2242, 2452, 2578
Bst6I CTCTTC 2 cut(s) 170, 2036
BstACI GRCGYC 3 cut(s) 93, 345, 2429
BstAFI CTTAAG 1 cut(s) 920
BstBAI YACGTR 1 cut(s) 849
BstBI TTCGAA 1 cut(s) 1490
BstC8I GCNNGC 8 cut(s) 47, 51, 123, 659, 1143, 1183, 1693, 2063
BstDSI CCRYGG 1 cut(s) 340
BstFNI CGCG 2 cut(s) 342, 575
BstHHI GCGC 4 cut(s) 464, 517, 601, 1993
BstMAI GTCTC 4 cut(s) 1528, 1711, 2386, 2420
BstMCI CGRYCG 1 cut(s) 532
BstMWI GCNNNNNNNGC 5 cut(s) 461, 496, 824, 833, 1598
BstNI CCWGG 5 cut(s) 26, 422, 1345, 1531, 1676
BstSCI CCNGG 5 cut(s) 24, 420, 1343, 1529, 1674
BstSFI CTRYAG 3 cut(s) 837, 1539, 1632
BstSLI GKGCMC 1 cut(s) 47
BstSNI TACGTA 1 cut(s) 849
BstUI CGCG 2 cut(s) 342, 575
BstV1I GCAGC 6 cut(s) 823, 851, 1275, 1564, 1782, 2668
BstV2I GAAGAC 2 cut(s) 918, 1518
BstX2I RGATCY 1 cut(s) 1619
BstYI RGATCY 1 cut(s) 1619
Bsu15I ATCGAT 2 cut(s) 528, 636
BsuI GTATCC 1 cut(s) 2762
BsuRI GGCC 5 cut(s) 53, 416, 1238, 2291, 2847
BsuTUI ATCGAT 2 cut(s) 528, 636
BtgI CCRYGG 1 cut(s) 340
BtsI GCAGTG 1 cut(s) 1436
BtsIMutI CAGTG 5 cut(s) 775, 1194, 1436, 1580, 2654
Cac8I GCNNGC 8 cut(s) 47, 51, 123, 659, 1143, 1183, 1693, 2063
CaiI CAGNNNCTG 1 cut(s) 1135
CciI TCATGA 1 cut(s) 1846
CfoI GCGC 4 cut(s) 464, 517, 601, 1993
Cfr10I RCCGGY 2 cut(s) 49, 366
Cfr13I GGNCC 7 cut(s) 28, 52, 202, 271, 1557, 1729, 2846
Cfr42I CCGCGG 1 cut(s) 343
ClaI ATCGAT 2 cut(s) 528, 636
CseI GACGC 2 cut(s) 334, 2309
Csp6I GTAC 6 cut(s) 334, 730, 974, 1353, 1872, 2574
CviQI GTAC 6 cut(s) 334, 730, 974, 1353, 1872, 2574
DrdI GACNNNNNNGTC 2 cut(s) 10, 209
DriI GACNNNNNGTC 1 cut(s) 1541
DseDI GACNNNNNNGTC 2 cut(s) 10, 209
EaeI YGGCCR 2 cut(s) 414, 2289
Eam1104I CTCTTC 2 cut(s) 170, 2036
Eam1105I GACNNNNNGTC 1 cut(s) 1541
EarI CTCTTC 2 cut(s) 170, 2036
Ecl136II GAGCTC 1 cut(s) 1444
Eco105I TACGTA 1 cut(s) 849
Eco130I CCWWGG 2 cut(s) 1239, 2256
Eco24I GRGCYC 3 cut(s) 326, 986, 1446
Eco31I GGTCTC 2 cut(s) 1528, 2386
Eco32I GATATC 1 cut(s) 1998
Eco47I GGWCC 5 cut(s) 28, 202, 271, 1557, 1729
Eco53kI GAGCTC 1 cut(s) 1444
Eco57I CTGAAG 4 cut(s) 2060, 2144, 2214, 2252
Eco88I CYCGRG 2 cut(s) 236, 261
EcoICRI GAGCTC 1 cut(s) 1444
EcoO109I RGGNCCY 2 cut(s) 271, 1557
EcoRI GAATTC 1 cut(s) 1495
EcoRII CCWGG 5 cut(s) 24, 420, 1343, 1529, 1674
EcoRV GATATC 1 cut(s) 1998
EcoT14I CCWWGG 2 cut(s) 1239, 2256
EcoT38I GRGCYC 3 cut(s) 326, 986, 1446
ErhI CCWWGG 2 cut(s) 1239, 2256
Esp3I CGTCTC 1 cut(s) 2420
FalI AAGNNNNNCTT 2 cut(s) 2813, 2845
FaqI GGGAC 2 cut(s) 1570, 2831
FbaI TGATCA 1 cut(s) 1779
Fnu4HI GCNGC 8 cut(s) 343, 837, 840, 1289, 1578, 1796, 2682, 2845
FriOI GRGCYC 3 cut(s) 326, 986, 1446
Fsp4HI GCNGC 8 cut(s) 343, 837, 840, 1289, 1578, 1796, 2682, 2845
FspBI CTAG 3 cut(s) 561, 1721, 2339
FspI TGCGCA 1 cut(s) 600
GlaI GCGC 4 cut(s) 463, 516, 600, 1992
GluI GCNGC 8 cut(s) 343, 837, 840, 1289, 1578, 1796, 2682, 2845
GsaI CCCAGC 1 cut(s) 163
GsuI CTGGAG 5 cut(s) 302, 443, 1697, 2130, 2328
HaeIII GGCC 5 cut(s) 53, 416, 1238, 2291, 2847
HapII CCGG 6 cut(s) 50, 278, 355, 367, 518, 1172
HgaI GACGC 2 cut(s) 334, 2309
HhaI GCGC 4 cut(s) 464, 517, 601, 1993
Hin1I GRCGYC 3 cut(s) 93, 345, 2429
Hin6I GCGC 4 cut(s) 462, 515, 599, 1991
HinP1I GCGC 4 cut(s) 462, 515, 599, 1991
HincII GTYRAC 2 cut(s) 1753, 2352
HindII GTYRAC 2 cut(s) 1753, 2352
HindIII AAGCTT 3 cut(s) 218, 1706, 1958
HpaI GTTAAC 1 cut(s) 1753
HpaII CCGG 6 cut(s) 50, 278, 355, 367, 518, 1172
HphI GGTGA 6 cut(s) 506, 728, 1112, 1676, 2737, 2818
Hpy166II GTNNAC 7 cut(s) 31, 781, 1353, 1510, 1753, 1874, 2352
Hpy8I GTNNAC 7 cut(s) 31, 781, 1353, 1510, 1753, 1874, 2352
Hpy99I CGWCG 3 cut(s) 95, 98, 450
HpyCH4III ACNGT 8 cut(s) 211, 494, 1189, 1522, 2209, 2242, 2452, 2578
HpyCH4IV ACGT 5 cut(s) 93, 186, 848, 2101, 2429
HpyF10VI GCNNNNNNNGC 5 cut(s) 461, 496, 824, 833, 1598
HpySE526I ACGT 5 cut(s) 93, 186, 848, 2101, 2429
Hsp92I GRCGYC 3 cut(s) 93, 345, 2429
HspAI GCGC 4 cut(s) 462, 515, 599, 1991
Kpn2I TCCGGA 1 cut(s) 1171
KroI GCCGGC 1 cut(s) 49
KroNI GCCGGC 1 cut(s) 51
Ksp22I TGATCA 1 cut(s) 1779
KspAI GTTAAC 1 cut(s) 1753
KspI CCGCGG 1 cut(s) 343
LguI GCTCTTC 2 cut(s) 170, 2036
LmnI GCTCC 5 cut(s) 357, 424, 1441, 1449, 2347
Lsp1109I GCAGC 6 cut(s) 823, 851, 1275, 1564, 1782, 2668
LweI GCATC 6 cut(s) 502, 1122, 1204, 1875, 2125, 2707
MaeI CTAG 3 cut(s) 561, 1721, 2339
MaeII ACGT 5 cut(s) 93, 186, 848, 2101, 2429
MaeIII GTNAC 6 cut(s) 346, 1389, 1664, 2203, 2236, 2411
MfeI CAATTG 1 cut(s) 1830
MflI RGATCY 1 cut(s) 1619
MhlI GDGCHC 7 cut(s) 47, 326, 429, 903, 986, 1187, 1446
MlsI TGGCCA 2 cut(s) 416, 2291
MluCI AATT 8 cut(s) 592, 683, 1269, 1495, 1830, 1854, 2272, 2778
MluI ACGCGT 1 cut(s) 573
MluNI TGGCCA 2 cut(s) 416, 2291
MmeI TCCRAC 3 cut(s) 660, 1296, 2052
Mox20I TGGCCA 2 cut(s) 416, 2291
MroI TCCGGA 1 cut(s) 1171
MroNI GCCGGC 1 cut(s) 49
MscI TGGCCA 2 cut(s) 416, 2291
MslI CAYNNNNRTG 2 cut(s) 473, 1190
Msp20I TGGCCA 2 cut(s) 416, 2291
MspA1I CMGCKG 1 cut(s) 342
MspCI CTTAAG 1 cut(s) 920
MspI CCGG 6 cut(s) 50, 278, 355, 367, 518, 1172
MspR9I CCNGG 5 cut(s) 26, 422, 1345, 1531, 1676
MunI CAATTG 1 cut(s) 1830
Mva1269I GAATGC 1 cut(s) 2154
MvaI CCWGG 5 cut(s) 26, 422, 1345, 1531, 1676
MvnI CGCG 2 cut(s) 342, 575
MwoI GCNNNNNNNGC 5 cut(s) 461, 496, 824, 833, 1598
NaeI GCCGGC 1 cut(s) 51
NgoMIV GCCGGC 1 cut(s) 49
NlaIV GGNNCC 3 cut(s) 359, 1558, 2263
NmuCI GTSAC 3 cut(s) 346, 1389, 1664
NsbI TGCGCA 1 cut(s) 600
NspV TTCGAA 1 cut(s) 1490
OliI CACNNNNGTG 1 cut(s) 1190
PaeR7I CTCGAG 1 cut(s) 236
PagI TCATGA 1 cut(s) 1846
PciSI GCTCTTC 2 cut(s) 170, 2036
PcsI WCGNNNNNNNCGW 3 cut(s) 87, 818, 2238
PctI GAATGC 1 cut(s) 2154
PdiI GCCGGC 1 cut(s) 51
PfeI GAWTC 7 cut(s) 409, 829, 940, 1333, 1654, 1841, 2172
PfoI TCCNGGA 2 cut(s) 1529, 1674
PkrI GCNGC 8 cut(s) 344, 838, 841, 1290, 1579, 1797, 2683, 2846
Ple19I CGATCG 1 cut(s) 532
Ppu21I YACGTR 1 cut(s) 849
PpuMI RGGWCCY 2 cut(s) 271, 1557
PshBI ATTAAT 1 cut(s) 912
Psp124BI GAGCTC 1 cut(s) 1446
Psp5II RGGWCCY 2 cut(s) 271, 1557
Psp6I CCWGG 5 cut(s) 24, 420, 1343, 1529, 1674
PspFI CCCAGC 1 cut(s) 159
PspGI CCWGG 5 cut(s) 24, 420, 1343, 1529, 1674
PspN4I GGNNCC 3 cut(s) 359, 1558, 2263
PspPI GGNCC 7 cut(s) 28, 52, 202, 271, 1557, 1729, 2846
PspPPI RGGWCCY 2 cut(s) 271, 1557
PstI CTGCAG 1 cut(s) 841
PstNI CAGNNNCTG 1 cut(s) 1135
PsuI RGATCY 1 cut(s) 1619
PvuI CGATCG 1 cut(s) 532
RsaI GTAC 6 cut(s) 335, 731, 975, 1354, 1873, 2575
RsaNI GTAC 6 cut(s) 334, 730, 974, 1353, 1872, 2574
RseI CAYNNNNRTG 2 cut(s) 473, 1190
SacI GAGCTC 1 cut(s) 1446
SacII CCGCGG 1 cut(s) 343
SapI GCTCTTC 2 cut(s) 170, 2036
SatI GCNGC 8 cut(s) 343, 837, 840, 1289, 1578, 1796, 2682, 2845
Sau96I GGNCC 7 cut(s) 28, 52, 202, 271, 1557, 1729, 2846
ScaI AGTACT 1 cut(s) 2575
ScrFI CCNGG 5 cut(s) 26, 422, 1345, 1531, 1676
SduI GDGCHC 7 cut(s) 47, 326, 429, 903, 986, 1187, 1446
SfaNI GCATC 6 cut(s) 502, 1122, 1204, 1875, 2125, 2707
SfcI CTRYAG 3 cut(s) 837, 1539, 1632
Sfr274I CTCGAG 1 cut(s) 236
Sfr303I CCGCGG 1 cut(s) 343
SfuI TTCGAA 1 cut(s) 1490
SgrBI CCGCGG 1 cut(s) 343
SinI GGWCC 5 cut(s) 28, 202, 271, 1557, 1729
SlaI CTCGAG 1 cut(s) 236
SmiMI CAYNNNNRTG 2 cut(s) 473, 1190
SmlI CTYRAG 9 cut(s) 116, 236, 920, 1025, 1106, 1642, 2066, 2441, 2793
SmoI CTYRAG 9 cut(s) 116, 236, 920, 1025, 1106, 1642, 2066, 2441, 2793
SnaBI TACGTA 1 cut(s) 849
Sse9I AATT 8 cut(s) 592, 683, 1269, 1495, 1830, 1854, 2272, 2778
SspI AATATT 1 cut(s) 1048
SspMI CTAG 3 cut(s) 561, 1721, 2339
SstI GAGCTC 1 cut(s) 1446
StyD4I CCNGG 5 cut(s) 24, 420, 1343, 1529, 1674
StyI CCWWGG 2 cut(s) 1239, 2256
TaaI ACNGT 8 cut(s) 211, 494, 1189, 1522, 2209, 2242, 2452, 2578
TaiI ACGT 5 cut(s) 96, 189, 851, 2104, 2432
TasI AATT 8 cut(s) 592, 683, 1269, 1495, 1830, 1854, 2272, 2778
TatI WGTACW 4 cut(s) 333, 729, 1352, 2573
TauI GCSGC 2 cut(s) 345, 2847
TfiI GAWTC 7 cut(s) 409, 829, 940, 1333, 1654, 1841, 2172
TscAI CASTG 5 cut(s) 775, 1194, 1436, 1587, 2661
TseFI GTSAC 3 cut(s) 346, 1389, 1664
TseI GCWGC 6 cut(s) 836, 839, 1288, 1577, 1795, 2681
Tsp45I GTSAC 3 cut(s) 346, 1389, 1664
TspDTI ATGAA 5 cut(s) 157, 1143, 1905, 2496, 2645
TspGWI ACGGA 2 cut(s) 20, 1859
TspRI CASTG 5 cut(s) 775, 1194, 1436, 1587, 2661
Vha464I CTTAAG 1 cut(s) 920
VpaK11BI GGWCC 5 cut(s) 28, 202, 271, 1557, 1729
VspI ATTAAT 1 cut(s) 912
XapI RAATTY 2 cut(s) 1495, 2272
XcmI CCANNNNNNNNNTGG 1 cut(s) 1798
XhoI CTCGAG 1 cut(s) 236
XspI CTAG 3 cut(s) 561, 1721, 2339
ZraI GACGTC 2 cut(s) 94, 2430
ZrmI AGTACT 1 cut(s) 2575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.