Rh2CG516300

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
69042194 .. 69088226
46033 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG516300.1

Sequence Viewer

Length: 2361 bp
ATGACAAGCCACACAAAACACATGTTGTATATACAAGTGAGTCTCCATAACATAAAACTTCTTCTTCATCTAAATTTAAATTTATCTCCCTCACTTCAAGAACAGCACCTTGGAAGAAAAAATGGGCGCCTCAAACACCAAGTTGTTCTTCCTGGCCATACATTGCCTTGCTCTTTTGGGGCCGTTTTATTTCAACTGGTCTGCGTTTTGGCTGGCTGTGGGACTCTATTTCGTTACAGGTGTGGTTATATAACTCTGTCTTTCCATAGAAACCTCGCTCACCACAGCTTCAAGCTTCCCAGATGGCTCGAGTACTCTTTTGCCTACTGCGCCGTCCTTTCGCTCCAGGTTTGTGAAACTGCACCCAAGGACTTTACAGACACATGGGATGACCCTCACAGTCCCATTAAGGGATTTTGGTACAGTCATTTTGGTTGGATCGTTGACTATCATTCTCGGTTTGGAACTCCCAACGCTCTAGAATTCAAGAATGTCGGAGACTTAAAGAAGCAGTGGTACTACAGGTTTCTTCACTATACGTATCCTTGTCACTCTGTTGCTCTTGGAATTCTGCTATATGCTGGAGGAGGGCTACCATTCTTGGTTTGGGGAATGGGTGTGAGGACTGTATTTTTTCTCCGCATTACCTTCTCAATAAACTCGATCTGCCACATATGGGGAAAGCAAGTATGGAATACTGGTGATTTGTCTAGAAACAACTGGTTGTTAGGTTTGCTAGCACATGGCGAAGGTTGGCACAATAATCATCATGCCTTTGAGTACTCAGCTCGACAAGGCTTGGAATGGTGGGAGATTGATACTACTTGGTATATAATAAGCTTCCTTGAAGCCATTGGTTTGGCTACAAACTTTTTGCTTTTAATTTATCTCTCTCACTTCAGGAACAGCACCATGGAAGAAAAAATGGACGCCTCAAAAACCAAGTTGTTTTTCCTGGCCATACATTGCCTTGCTCTTTTGGGGCCGTTTTATTTCAACTGGTCTGCGTTTTGGCTGGCTGTGGCACTCTATTTTGTTACAGGTGTGGGTATAACTCTGTCTTTCCATAGAAACCTCGCTCACCGCAGCTTCAAGCTTCCCAGATGGCTCGAGTACTCTTTTGCCTACTGCGCCGTCCTTTCGCTCCAGGGAAGTCCAATTGAATGGGTGAGCACACACAGAATCCATCATCATTTTACAGACACATGGGATGATCCTCACAGTCCCATTAAGGGATTTTGGTACAGTCATATTGGTTGGGTTGTTGACTATCATTCTCGGTTTGGAACTCCTGACACACTAGAATTCAAAAATGTCGGAGACTTAAAGAAGCAGTGGTACTATAGGTTTATTCACTGTACGTATCCTTATCACTCTGTAGCTCTTGGAATTCTGCTATATGCTGGAGGAGGGCTACCATTCTTGGTTTGGGGAATGGGTGTGAGGACTGTATTTTTTCTCCACATTACCTTTTCAATAAACTCGATCTGCCACATATGGGGAAAGCAAGTATGGAATACTGGTGATTTGTCTAGAAACAACTGGTTGTTAGGTTTGCTGGCACATGGCGAAGGTTGGCACAATAATCATCATGCCTTTGAGTACTCAGCTCGACAAGGCTTGGAATGGTGGGAGATTGACACTACTTGGTATATAATAAGCTTCCTTGAAGCCATTGGTTTGGCTACAGACGTAAAACTCCCAAATGAAGCTCATAAGAAAAGAAAGGCAAGAATAGCAGTACTATCCAGTAATGTTGATAAGGAAAAGGTCAAAGTCGATCGGGATTTAAGCAACAACCGCCGTGGAAGGGGAAATGGAGGCTTCAACAACCAAGTTTCTTTTCCTGGCCACACATTGCCTTGCTCTTTTGGGGCCGTTATATTTCAACTGCCCGACGCATTAGAATTCAAGAATGTTGGAGACTTAAAGAAGCAGTGGTACTATAGGTTTCTTCACTATACGTATCCTTGTCACTCTGTTGCTCTTGGAATTCTGCTATATGCTGGAGGAGGGCTACCATCCTTGGTTTGGGGAATGGGTGTGAGAACTATATTTTTACTCCAGATTACTTTTTCAATAAACTCGATCTGCCACATATGGGGAAAGCAAGTATGGAATACTGGTGATTTGTCTAGAAAGAACTGGTTGTTAGGGTTGCTAGCACTTGGCGAGGGTTGGCACAAAAATCATCATGCCTTTGAGTACTCAGCTCGACAAGGCTTGGAATGGTGGGAGATTGACACTACTTGGTATATAATACGCTTCCTTGAAGCCATTGGTTTGGCTACAGACGTAAAACTCCCAACTGAAGCTCATAAGAAACGAAAGGCTTTATGCAAGAATCGCACTATGGAGTAA

Protein Analysis

786

Amino Acids

91.0

Weight (kDa)

9.1

Isoelectric Point (pI)

30.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_desaturase PF00487 73 - 278 2.2e-07 Fatty acid desaturase
FA_desaturase PF00487 333 - 552 1.6e-17 Fatty acid desaturase
FA_desaturase PF00487 642 - 755 1.3e-07 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 126
AciI CCGC 3 cut(s) 640, 1084, 1801
AclWI GGATC 2 cut(s) 446, 1208
AcoI YGGCCR 3 cut(s) 154, 957, 1849
AcsI RAATTY 8 cut(s) 73, 79, 482, 567, 1304, 1389, 1907, 1992
AcuI CTGAAG 2 cut(s) 883, 2331
AcyI GRCGYC 2 cut(s) 127, 930
AfiI CCNNNNNNNGG 7 cut(s) 410, 676, 1232, 1498, 1810, 2031, 2101
AflIII ACRYGT 1 cut(s) 21
AjnI CCWGG 5 cut(s) 151, 345, 954, 1146, 1846
AjuI GAANNNNNNNTTGG 8 cut(s) 93, 125, 132, 164, 935, 967, 1827, 1859
Alw21I GWGCWC 1 cut(s) 1175
Alw26I GTCTC 4 cut(s) 47, 492, 1314, 1917
AlwI GGATC 2 cut(s) 446, 1208
Ama87I CYCGRG 2 cut(s) 308, 1109
AoxI GGCC 6 cut(s) 154, 180, 957, 983, 1849, 1875
ApeKI GCWGC 1 cut(s) 1086
ApoI RAATTY 8 cut(s) 73, 79, 482, 567, 1304, 1389, 1907, 1992
AspLEI GCGC 3 cut(s) 129, 332, 1133
AspS9I GGNCC 3 cut(s) 180, 983, 1875
AsuHPI GGTGA 6 cut(s) 272, 713, 1073, 1180, 1535, 2138
AsuNHI GCTAGC 2 cut(s) 736, 2161
AvaI CYCGRG 2 cut(s) 308, 1109
BalI TGGCCA 3 cut(s) 156, 959, 1851
BanI GGYRCC 1 cut(s) 126
BarI GAAGNNNNNNTAC 6 cut(s) 500, 532, 1322, 1354, 1925, 1957
Bbv12I GWGCWC 1 cut(s) 1175
BbvI GCAGC 1 cut(s) 1098
BccI CCATC 4 cut(s) 297, 1098, 1194, 2029
BceAI ACGGC 6 cut(s) 167, 317, 970, 1118, 1788, 1862
BciT130I CCWGG 5 cut(s) 153, 347, 956, 1148, 1848
BciVI GTATCC 3 cut(s) 552, 1374, 1977
BcoDI GTCTC 4 cut(s) 47, 492, 1314, 1917
BfaI CTAG 7 cut(s) 479, 711, 737, 1301, 1533, 2136, 2162
BfmI CTRYAG 6 cut(s) 520, 1342, 1377, 1686, 1945, 2289
BfoI RGCGCY 1 cut(s) 130
BfuI GTATCC 3 cut(s) 552, 1374, 1977
BisI GCNGC 1 cut(s) 1087
BlsI GCNGC 1 cut(s) 1088
BmcAI AGTACT 6 cut(s) 314, 782, 1115, 1604, 1743, 2207
Bme1390I CCNGG 5 cut(s) 153, 347, 956, 1148, 1848
BmeT110I CYCGRG 2 cut(s) 308, 1109
BmgT120I GGNCC 3 cut(s) 180, 983, 1875
BmiI GGNNCC 4 cut(s) 128, 181, 984, 1876
BmrFI CCNGG 5 cut(s) 153, 347, 956, 1148, 1848
BmtI GCTAGC 2 cut(s) 740, 2165
BpmI CTGGAG 6 cut(s) 329, 603, 1130, 1425, 2028, 2048
BsaAI YACGTR 3 cut(s) 540, 1362, 1965
BsaHI GRCGYC 2 cut(s) 127, 930
BsaJI CCNNGG 6 cut(s) 109, 366, 912, 1147, 1804, 2025
Bsc4I CCNNNNNNNGG 7 cut(s) 410, 676, 1232, 1498, 1810, 2031, 2101
Bse1I ACTGG 9 cut(s) 201, 703, 725, 1004, 1525, 1547, 1749, 2128, 2150
Bse3DI GCAATG 3 cut(s) 161, 964, 1856
BseBI CCWGG 5 cut(s) 153, 347, 956, 1148, 1848
BseDI CCNNGG 6 cut(s) 109, 366, 912, 1147, 1804, 2025
BseGI GGATG 3 cut(s) 394, 1216, 2021
BseLI CCNNNNNNNGG 7 cut(s) 410, 676, 1232, 1498, 1810, 2031, 2101
BseMI GCAATG 3 cut(s) 161, 964, 1856
BseMII CTCAG 3 cut(s) 798, 1620, 2223
BseNI ACTGG 9 cut(s) 201, 703, 725, 1004, 1525, 1547, 1749, 2128, 2150
BseRI GAGGAG 3 cut(s) 600, 1422, 2025
BseXI GCAGC 1 cut(s) 1098
BsgI GTGCAG 1 cut(s) 345
Bsh1285I CGRYCG 1 cut(s) 1783
BshFI GGCC 6 cut(s) 156, 182, 959, 985, 1851, 1877
BshNI GGYRCC 1 cut(s) 126
BsiEI CGRYCG 1 cut(s) 1783
BsiHKAI GWGCWC 1 cut(s) 1175
BsiHKCI CYCGRG 2 cut(s) 308, 1109
BslFI GGGAC 3 cut(s) 235, 387, 1209
BslI CCNNNNNNNGG 7 cut(s) 410, 676, 1232, 1498, 1810, 2031, 2101
BsmAI GTCTC 4 cut(s) 47, 492, 1314, 1917
BsmFI GGGAC 3 cut(s) 235, 387, 1209
BsnI GGCC 6 cut(s) 156, 182, 959, 985, 1851, 1877
BsoBI CYCGRG 2 cut(s) 308, 1109
Bsp1286I GDGCHC 1 cut(s) 1175
Bsp143I GATC 6 cut(s) 438, 663, 1213, 1485, 1780, 2088
Bsp19I CCATGG 1 cut(s) 912
BspACI CCGC 3 cut(s) 640, 1084, 1801
BspANI GGCC 6 cut(s) 156, 182, 959, 985, 1851, 1877
BspCNI CTCAG 3 cut(s) 797, 1619, 2222
BspLI GGNNCC 4 cut(s) 128, 181, 984, 1876
BspOI GCTAGC 2 cut(s) 740, 2165
BspPI GGATC 2 cut(s) 446, 1208
BspT107I GGYRCC 1 cut(s) 126
BsrDI GCAATG 3 cut(s) 161, 964, 1856
BsrI ACTGG 9 cut(s) 201, 703, 725, 1004, 1525, 1547, 1749, 2128, 2150
BssECI CCNNGG 6 cut(s) 109, 366, 912, 1147, 1804, 2025
BssMI GATC 6 cut(s) 438, 663, 1213, 1485, 1780, 2088
BssNI GRCGYC 2 cut(s) 127, 930
BssT1I CCWWGG 4 cut(s) 109, 366, 912, 2025
Bst2UI CCWGG 5 cut(s) 153, 347, 956, 1148, 1848
Bst4CI ACNGT 7 cut(s) 401, 425, 628, 1223, 1247, 1358, 1450
BstACI GRCGYC 2 cut(s) 127, 930
BstBAI YACGTR 3 cut(s) 540, 1362, 1965
BstC8I GCNNGC 5 cut(s) 214, 738, 1017, 1560, 2163
BstDEI CTNAG 3 cut(s) 784, 1606, 2209
BstDSI CCRYGG 2 cut(s) 912, 1804
BstF5I GGATG 3 cut(s) 394, 1216, 2021
BstH2I RGCGCY 1 cut(s) 130
BstHHI GCGC 3 cut(s) 129, 332, 1133
BstKTI GATC 6 cut(s) 441, 666, 1216, 1488, 1783, 2091
BstMAI GTCTC 4 cut(s) 47, 492, 1314, 1917
BstMBI GATC 6 cut(s) 438, 663, 1213, 1485, 1780, 2088
BstMCI CGRYCG 1 cut(s) 1783
BstMWI GCNNNNNNNGC 5 cut(s) 329, 1130, 1736, 1800, 2346
BstNI CCWGG 5 cut(s) 153, 347, 956, 1148, 1848
BstNSI RCATGY 1 cut(s) 25
BstSCI CCNGG 5 cut(s) 151, 345, 954, 1146, 1846
BstSFI CTRYAG 6 cut(s) 520, 1342, 1377, 1686, 1945, 2289
BstSNI TACGTA 3 cut(s) 540, 1362, 1965
BstV1I GCAGC 1 cut(s) 1098
BstXI CCANNNNNNTGG 4 cut(s) 859, 1164, 1681, 2284
BsuI GTATCC 3 cut(s) 552, 1374, 1977
BsuRI GGCC 6 cut(s) 156, 182, 959, 985, 1851, 1877
BtgI CCRYGG 2 cut(s) 912, 1804
BtsCI GGATG 3 cut(s) 394, 1216, 2021
BtsI GCAGTG 3 cut(s) 518, 1340, 1943
BtsIMutI CAGTG 4 cut(s) 518, 1340, 1354, 1943
Cac8I GCNNGC 5 cut(s) 214, 738, 1017, 1560, 2163
CfoI GCGC 3 cut(s) 129, 332, 1133
Cfr13I GGNCC 3 cut(s) 180, 983, 1875
CseI GACGC 2 cut(s) 938, 1907
CspCI CAANNNNNGTGG 2 cut(s) 1786, 1821
CviAII CATG 9 cut(s) 22, 384, 743, 770, 913, 1206, 1565, 1592, 2195
DdeI CTNAG 3 cut(s) 784, 1606, 2209
DinI GGCGCC 1 cut(s) 128
DpnI GATC 6 cut(s) 440, 665, 1215, 1487, 1782, 2090
DpnII GATC 6 cut(s) 438, 663, 1213, 1485, 1780, 2088
DraI TTTAAA 1 cut(s) 78
EaeI YGGCCR 3 cut(s) 154, 957, 1849
Eco105I TACGTA 3 cut(s) 540, 1362, 1965
Eco130I CCWWGG 4 cut(s) 109, 366, 912, 2025
Eco57I CTGAAG 2 cut(s) 883, 2331
Eco88I CYCGRG 2 cut(s) 308, 1109
EcoRI GAATTC 6 cut(s) 482, 567, 1304, 1389, 1907, 1992
EcoRII CCWGG 5 cut(s) 151, 345, 954, 1146, 1846
EcoT14I CCWWGG 4 cut(s) 109, 366, 912, 2025
EgeI GGCGCC 1 cut(s) 128
EheI GGCGCC 1 cut(s) 128
ErhI CCWWGG 4 cut(s) 109, 366, 912, 2025
FaeI CATG 9 cut(s) 25, 387, 746, 773, 916, 1209, 1568, 1595, 2198
FalI AAGNNNNNCTT 2 cut(s) 132, 164
FaqI GGGAC 3 cut(s) 235, 387, 1209
FatI CATG 9 cut(s) 21, 383, 742, 769, 912, 1205, 1564, 1591, 2194
FauNDI CATATG 3 cut(s) 674, 1496, 2099
Fnu4HI GCNGC 1 cut(s) 1087
FokI GGATG 3 cut(s) 401, 1223, 2008
Fsp4HI GCNGC 1 cut(s) 1087
FspBI CTAG 7 cut(s) 479, 711, 737, 1301, 1533, 2136, 2162
GlaI GCGC 3 cut(s) 128, 331, 1132
GluI GCNGC 1 cut(s) 1087
GsuI CTGGAG 6 cut(s) 329, 603, 1130, 1425, 2028, 2048
HaeII RGCGCY 1 cut(s) 130
HaeIII GGCC 6 cut(s) 156, 182, 959, 985, 1851, 1877
HgaI GACGC 2 cut(s) 938, 1907
HhaI GCGC 3 cut(s) 129, 332, 1133
Hin1I GRCGYC 2 cut(s) 127, 930
Hin1II CATG 9 cut(s) 25, 387, 746, 773, 916, 1209, 1568, 1595, 2198
Hin6I GCGC 3 cut(s) 127, 330, 1131
HinP1I GCGC 3 cut(s) 127, 330, 1131
HincII GTYRAC 2 cut(s) 445, 1267
HindII GTYRAC 2 cut(s) 445, 1267
HindIII AAGCTT 4 cut(s) 293, 838, 1094, 1660
HinfI GANTC 4 cut(s) 40, 223, 1182, 2344
HphI GGTGA 6 cut(s) 272, 713, 1073, 1180, 1535, 2138
Hpy166II GTNNAC 2 cut(s) 445, 1267
Hpy188I TCNGA 2 cut(s) 497, 1319
Hpy8I GTNNAC 2 cut(s) 445, 1267
Hpy99I CGWCG 1 cut(s) 1901
HpyAV CCTTC 4 cut(s) 658, 743, 1565, 1803
HpyCH4III ACNGT 7 cut(s) 401, 425, 628, 1223, 1247, 1358, 1450
HpyCH4IV ACGT 5 cut(s) 539, 1361, 1692, 1964, 2295
HpyCH4V TGCA 2 cut(s) 362, 2340
HpyF10VI GCNNNNNNNGC 5 cut(s) 329, 1130, 1736, 1800, 2346
HpyF3I CTNAG 3 cut(s) 784, 1606, 2209
HpySE526I ACGT 5 cut(s) 539, 1361, 1692, 1964, 2295
Hsp92I GRCGYC 2 cut(s) 127, 930
Hsp92II CATG 9 cut(s) 25, 387, 746, 773, 916, 1209, 1568, 1595, 2198
HspAI GCGC 3 cut(s) 127, 330, 1131
KasI GGCGCC 1 cut(s) 126
Kzo9I GATC 6 cut(s) 438, 663, 1213, 1485, 1780, 2088
LmnI GCTCC 2 cut(s) 348, 1149
Lsp1109I GCAGC 1 cut(s) 1098
MaeI CTAG 7 cut(s) 479, 711, 737, 1301, 1533, 2136, 2162
MaeII ACGT 5 cut(s) 539, 1361, 1692, 1964, 2295
MaeIII GTNAC 4 cut(s) 233, 548, 1036, 1973
MalI GATC 6 cut(s) 440, 665, 1215, 1487, 1782, 2090
MboI GATC 6 cut(s) 438, 663, 1213, 1485, 1780, 2088
MboII GAAGA 7 cut(s) 53, 56, 126, 140, 521, 929, 1946
MfeI CAATTG 1 cut(s) 1158
MhlI GDGCHC 1 cut(s) 1175
MlsI TGGCCA 3 cut(s) 156, 959, 1851
MluNI TGGCCA 3 cut(s) 156, 959, 1851
Mly113I GGCGCC 1 cut(s) 127
MlyI GAGTC 2 cut(s) 49, 217
MmeI TCCRAC 4 cut(s) 416, 475, 1297, 1900
Mox20I TGGCCA 3 cut(s) 156, 959, 1851
MscI TGGCCA 3 cut(s) 156, 959, 1851
MseI TTAA 8 cut(s) 77, 408, 503, 881, 1230, 1325, 1790, 1928
Msp20I TGGCCA 3 cut(s) 156, 959, 1851
MspR9I CCNGG 5 cut(s) 153, 347, 956, 1148, 1848
MunI CAATTG 1 cut(s) 1158
MvaI CCWGG 5 cut(s) 153, 347, 956, 1148, 1848
MwoI GCNNNNNNNGC 5 cut(s) 329, 1130, 1736, 1800, 2346
NarI GGCGCC 1 cut(s) 127
NcoI CCATGG 1 cut(s) 912
NdeI CATATG 3 cut(s) 674, 1496, 2099
NdeII GATC 6 cut(s) 438, 663, 1213, 1485, 1780, 2088
NheI GCTAGC 2 cut(s) 736, 2161
NlaIII CATG 9 cut(s) 25, 387, 746, 773, 916, 1209, 1568, 1595, 2198
NlaIV GGNNCC 4 cut(s) 128, 181, 984, 1876
NmuCI GTSAC 2 cut(s) 548, 1973
NspI RCATGY 1 cut(s) 25
PaeR7I CTCGAG 2 cut(s) 308, 1109
PciI ACATGT 1 cut(s) 21
PfeI GAWTC 2 cut(s) 1182, 2344
PkrI GCNGC 1 cut(s) 1088
Ple19I CGATCG 1 cut(s) 1783
PleI GAGTC 2 cut(s) 48, 217
PluTI GGCGCC 1 cut(s) 130
PpsI GAGTC 2 cut(s) 48, 217
Ppu21I YACGTR 3 cut(s) 540, 1362, 1965
PscI ACATGT 1 cut(s) 21
Psp6I CCWGG 5 cut(s) 151, 345, 954, 1146, 1846
PspGI CCWGG 5 cut(s) 151, 345, 954, 1146, 1846
PspN4I GGNNCC 4 cut(s) 128, 181, 984, 1876
PspPI GGNCC 3 cut(s) 180, 983, 1875
PspXI VCTCGAGB 2 cut(s) 308, 1109
PvuI CGATCG 1 cut(s) 1783
SaqAI TTAA 8 cut(s) 77, 408, 503, 881, 1230, 1325, 1790, 1928
SatI GCNGC 1 cut(s) 1087
Sau3AI GATC 6 cut(s) 438, 663, 1213, 1485, 1780, 2088
Sau96I GGNCC 3 cut(s) 180, 983, 1875
ScaI AGTACT 6 cut(s) 314, 782, 1115, 1604, 1743, 2207
SchI GAGTC 2 cut(s) 49, 217
ScrFI CCNGG 5 cut(s) 153, 347, 956, 1148, 1848
SduI GDGCHC 1 cut(s) 1175
SfcI CTRYAG 6 cut(s) 520, 1342, 1377, 1686, 1945, 2289
SfoI GGCGCC 1 cut(s) 128
Sfr274I CTCGAG 2 cut(s) 308, 1109
SlaI CTCGAG 2 cut(s) 308, 1109
SmiI ATTTAAAT 1 cut(s) 78
SmlI CTYRAG 2 cut(s) 308, 1109
SmoI CTYRAG 2 cut(s) 308, 1109
SnaBI TACGTA 3 cut(s) 540, 1362, 1965
SsiI CCGC 3 cut(s) 640, 1084, 1801
SspDI GGCGCC 1 cut(s) 126
SspMI CTAG 7 cut(s) 479, 711, 737, 1301, 1533, 2136, 2162
StyD4I CCNGG 5 cut(s) 151, 345, 954, 1146, 1846
StyI CCWWGG 4 cut(s) 109, 366, 912, 2025
SwaI ATTTAAAT 1 cut(s) 78
TaaI ACNGT 7 cut(s) 401, 425, 628, 1223, 1247, 1358, 1450
TaiI ACGT 5 cut(s) 542, 1364, 1695, 1967, 2298
TaqI TCGA 9 cut(s) 309, 662, 790, 1110, 1484, 1612, 1779, 2087, 2215
TatI WGTACW 6 cut(s) 312, 780, 1113, 1602, 1741, 2205
TfiI GAWTC 2 cut(s) 1182, 2344
Tru1I TTAA 8 cut(s) 77, 408, 503, 881, 1230, 1325, 1790, 1928
Tru9I TTAA 8 cut(s) 77, 408, 503, 881, 1230, 1325, 1790, 1928
TscAI CASTG 4 cut(s) 518, 1340, 1361, 1943
TseFI GTSAC 2 cut(s) 548, 1973
TseI GCWGC 1 cut(s) 1086
Tsp45I GTSAC 2 cut(s) 548, 1973
TspDTI ATGAA 2 cut(s) 56, 1722
TspRI CASTG 4 cut(s) 518, 1340, 1361, 1943
XapI RAATTY 8 cut(s) 73, 79, 482, 567, 1304, 1389, 1907, 1992
XbaI TCTAGA 4 cut(s) 478, 710, 1532, 2135
XceI RCATGY 1 cut(s) 25
XcmI CCANNNNNNNNNTGG 3 cut(s) 603, 1425, 2028
XhoI CTCGAG 2 cut(s) 308, 1109
XspI CTAG 7 cut(s) 479, 711, 737, 1301, 1533, 2136, 2162
ZrmI AGTACT 6 cut(s) 314, 782, 1115, 1604, 1743, 2207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.