MD09G1114000.v1.1

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
8663064 .. 8669482
6419 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1114000.v1.1.491

Sequence Viewer

Length: 1737 bp
ATGATAGATTGGGATCGGTGGCTGGTGAAGTGGCATATAGAGTTTTGGGGGAGGCAATGGAACTTTGTCGATATCGCCACTTTGGCTGGCCTTTCCTATTTGCATTACCTTGCTCTTCTAGCACCGTTTCATTTCAACTGGACTGCGTTTTGGCTGGCCGTCGCACTTTATTTTATCACAGGTGTGGGTGTAACCCTATCGTTCCATAGGAACCTTTCACACCGGAGTTTTATTCTTCCAAAGTGGCTTGAATACTTCTTTGCTTATTGTGGGGTTCTTTCACTTCAGAGAAGTCCACTTGAGTGGGTGAGCATCCACAGAGCTCACCATCAATTTACTGACACGTTGAAAGACCCCCATAGCCCTATTAAGGGATTCTGGTTCAGTCATATTGGTTGGGCCATTGATTATCGTAATCGGTTTGGAAGTTATGAAGCTAGATTAAAGAACGTTGGAGACTTAAAAAGCCAACCATACTATAGGTTTCTTCATTATACGTACCCCCTTCATTCAATTGCTCTTGGAGTTGTATTGTATGCTATAGGAGGAATGCCCTTTTTAGTTTGGGGAATGGGCGTGAGGACGGTAATTTTTCTCCACGCTATATTTGGATTAAATTCGGTTTGCCACACATGGGGGCAAGCAGTATGGGACAGTGGTGATTTGTCTAAAAACAACTGGATCTTAGGATTGCTGACACATGGAGAAGGTTGGCACAATAATCACCATGCATTTGAGTTCTCAGCTCGGCATGGATTTGAATGGTGGCAAATTGATGTTACTTGTTTTGTGGCAAGCCCAATGGGAGAGTGGGTGACGCAGTGGAGGGTAGAATTTTTGGGGAGGGAATGGAACGTCGTGGACATAGGCTCAGTAGTCGTCGTTTCGGCTTTGCATTTGCTTACTCTTTTAGCTCCATTTCATTTCAACTGGCCTGCATTTTGGGTAGCAATTGCACTCTATCTTGTCGTAGGAGTGAGTGTGAATCTCTCTTACCACAGGCAACTTTCCCACCGGAGTTTCAAGCTTCCCAAATGGCTTGAATATTTTTTTGCTTACTGTGGAGTCCTATCGTTTCAGAGAAGTCCGCTTGAATGGGTGAGCATACACCGATCTCACCACCAATTTACAGACACATTGAAGGACCCTCATAGTCCAGTTAGAGGATTTTGGTATAGTCACATTGGTTGGATCTTCGATTATCGTTCTCGGTTTGGAAGTTATGAAGCACGACTAAAGAATGTTGGAGACTTGAAAAGGCAGCCATTCTATAGATTTCTTCATTATACGTACCCCCTTCATGCAATTGGTTTTGGAGTTCTCCTCTACGCTTTGGGAGGATCACCCTTTCTGGTTTGGGGACTGGGTGTGAGGTCAGTCATTTTTCTCCATGCTACTTTTGGAATAAATTCAATTTGCCATACTTGGGGGCAACAAGTATGGGATACTGGTGATTTGTCTCGAAACAACTGGTTAATTGGATTGCTGGCGCATGGAGAAGGTTGGCATAACAATCACCATGCATTTGAACACTCAGCTCGGCACGGCCTAGAGTGGTGGCAAATTGATATTACTTGGTACGTAATAAGATTTCTTGAAGCTGTTGGATTAGCAACGGATGTAAAGCTTCCTACTGAGACTCAGAAGAATCGAAGAGCTTTAATGTTAACCAGCAACAACCACCAAATCAACAACGAAAAACAACTCAACGCAAAAATCAACAATGGAAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

579

Amino Acids

67.6

Weight (kDa)

9.15

Isoelectric Point (pI)

32.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_desaturase PF00487 46 - 257 1.9e-16 Fatty acid desaturase
FA_desaturase PF00487 311 - 528 3.6e-17 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 1088
AclI AACGTT 1 cut(s) 450
AclWI GGATC 4 cut(s) 21, 689, 1199, 1348
AcoI YGGCCR 1 cut(s) 156
AcsI RAATTY 3 cut(s) 616, 833, 1408
AcuI CTGAAG 1 cut(s) 269
AfaI GTAC 3 cut(s) 500, 1292, 1580
AfiI CCNNNNNNNGG 5 cut(s) 370, 371, 634, 1163, 1426
AflIII ACRYGT 1 cut(s) 342
AleI CACNNNNGTG 2 cut(s) 182, 301
Alw21I GWGCWC 1 cut(s) 325
Alw26I GTCTC 4 cut(s) 450, 1242, 1464, 1631
AlwI GGATC 4 cut(s) 21, 689, 1199, 1348
AoxI GGCC 5 cut(s) 88, 156, 399, 932, 1546
ApeKI GCWGC 1 cut(s) 1261
ApoI RAATTY 3 cut(s) 616, 833, 1408
Asp700I GAANNNNTTC 1 cut(s) 1408
AspLEI GCGC 1 cut(s) 1492
AspS9I GGNCC 2 cut(s) 399, 1144
AvaII GGWCC 1 cut(s) 1144
BanII GRGCYC 1 cut(s) 325
Bbv12I GWGCWC 1 cut(s) 325
BbvI GCAGC 1 cut(s) 1273
BccI CCATC 1 cut(s) 336
BceAI ACGGC 2 cut(s) 143, 1561
BciVI GTATCC 1 cut(s) 1438
BcoDI GTCTC 4 cut(s) 450, 1242, 1464, 1631
BfaI CTAG 3 cut(s) 119, 438, 1550
BfmI CTRYAG 3 cut(s) 478, 540, 1270
BfuI GTATCC 1 cut(s) 1438
BglI GCCNNNNNGGC 1 cut(s) 83
BisI GCNGC 1 cut(s) 1262
BlsI GCNGC 1 cut(s) 1263
Bme18I GGWCC 1 cut(s) 1144
BmgT120I GGNCC 2 cut(s) 399, 1144
BmiI GGNNCC 2 cut(s) 212, 1146
BmrI ACTGGG 1 cut(s) 1373
BmsI GCATC 1 cut(s) 321
BmuI ACTGGG 1 cut(s) 1373
BplI GAGNNNNNCTC 2 cut(s) 1308, 1340
BpuEI CTTGAG 1 cut(s) 320
BsaAI YACGTR 3 cut(s) 498, 1290, 1582
BsaBI GATNNNNATC 1 cut(s) 12
BsaWI WCCGGW 2 cut(s) 222, 1014
BsaXI ACNNNNNCTCC 4 cut(s) 798, 828, 966, 996
Bsc4I CCNNNNNNNGG 5 cut(s) 370, 371, 634, 1163, 1426
Bse1I ACTGG 7 cut(s) 143, 683, 935, 1157, 1368, 1453, 1475
Bse3DI GCAATG 1 cut(s) 62
Bse8I GATNNNNATC 1 cut(s) 12
BseGI GGATG 2 cut(s) 312, 1624
BseJI GATNNNNATC 1 cut(s) 12
BseLI CCNNNNNNNGG 5 cut(s) 370, 371, 634, 1163, 1426
BseMI GCAATG 1 cut(s) 62
BseMII CTCAG 5 cut(s) 756, 885, 1548, 1626, 1655
BseNI ACTGG 7 cut(s) 143, 683, 935, 1157, 1368, 1453, 1475
BseRI GAGGAG 1 cut(s) 1313
BseXI GCAGC 1 cut(s) 1273
BshFI GGCC 5 cut(s) 90, 158, 401, 934, 1548
BsiHKAI GWGCWC 1 cut(s) 325
BsiSI CCGG 2 cut(s) 223, 1015
BslFI GGGAC 2 cut(s) 665, 1374
BslI CCNNNNNNNGG 5 cut(s) 370, 371, 634, 1163, 1426
BsmAI GTCTC 4 cut(s) 450, 1242, 1464, 1631
BsmFI GGGAC 2 cut(s) 665, 1374
BsmI GAATGC 1 cut(s) 555
BsnI GGCC 5 cut(s) 90, 158, 401, 934, 1548
Bsp1286I GDGCHC 1 cut(s) 325
Bsp143I GATC 5 cut(s) 13, 681, 1112, 1191, 1340
BspACI CCGC 1 cut(s) 1088
BspANI GGCC 5 cut(s) 90, 158, 401, 934, 1548
BspCNI CTCAG 5 cut(s) 755, 884, 1547, 1627, 1654
BspLI GGNNCC 2 cut(s) 212, 1146
BspPI GGATC 4 cut(s) 21, 689, 1199, 1348
BspQI GCTCTTC 2 cut(s) 120, 1648
BsrDI GCAATG 1 cut(s) 62
BsrI ACTGG 7 cut(s) 143, 683, 935, 1157, 1368, 1453, 1475
BssMI GATC 5 cut(s) 13, 681, 1112, 1191, 1340
Bst4CI ACNGT 4 cut(s) 126, 586, 656, 1061
Bst6I CTCTTC 2 cut(s) 120, 1648
BstBAI YACGTR 3 cut(s) 498, 1290, 1582
BstC8I GCNNGC 6 cut(s) 88, 156, 642, 796, 936, 1488
BstDEI CTNAG 6 cut(s) 685, 742, 871, 1534, 1635, 1641
BstF5I GGATG 2 cut(s) 312, 1624
BstHHI GCGC 1 cut(s) 1492
BstKTI GATC 5 cut(s) 16, 684, 1115, 1194, 1343
BstMAI GTCTC 4 cut(s) 450, 1242, 1464, 1631
BstMBI GATC 5 cut(s) 13, 681, 1112, 1191, 1340
BstMWI GCNNNNNNNGC 2 cut(s) 83, 119
BstSFI CTRYAG 3 cut(s) 478, 540, 1270
BstSNI TACGTA 3 cut(s) 498, 1290, 1582
BstV1I GCAGC 1 cut(s) 1273
BstX2I RGATCY 2 cut(s) 681, 1191
BstXI CCANNNNNNTGG 1 cut(s) 303
BstYI RGATCY 2 cut(s) 681, 1191
BsuI GTATCC 1 cut(s) 1438
BsuRI GGCC 5 cut(s) 90, 158, 401, 934, 1548
BtsCI GGATG 2 cut(s) 312, 1624
BtsI GCAGTG 1 cut(s) 827
BtsIMutI CAGTG 2 cut(s) 661, 827
Cac8I GCNNGC 6 cut(s) 88, 156, 642, 796, 936, 1488
CfoI GCGC 1 cut(s) 1492
Cfr13I GGNCC 2 cut(s) 399, 1144
CseI GACGC 1 cut(s) 826
Csp6I GTAC 3 cut(s) 499, 1291, 1579
CviAII CATG 8 cut(s) 633, 701, 728, 752, 1301, 1391, 1493, 1520
CviQI GTAC 3 cut(s) 499, 1291, 1579
DdeI CTNAG 6 cut(s) 685, 742, 871, 1534, 1635, 1641
DpnI GATC 5 cut(s) 15, 683, 1114, 1193, 1342
DpnII GATC 5 cut(s) 13, 681, 1112, 1191, 1340
EaeI YGGCCR 1 cut(s) 156
Eam1104I CTCTTC 2 cut(s) 120, 1648
EarI CTCTTC 2 cut(s) 120, 1648
Ecl136II GAGCTC 1 cut(s) 323
Eco105I TACGTA 3 cut(s) 498, 1290, 1582
Eco24I GRGCYC 1 cut(s) 325
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 1 cut(s) 1144
Eco53kI GAGCTC 1 cut(s) 323
Eco57I CTGAAG 1 cut(s) 269
EcoICRI GAGCTC 1 cut(s) 323
EcoO109I RGGNCCY 1 cut(s) 1144
EcoRV GATATC 1 cut(s) 73
EcoT22I ATGCAT 2 cut(s) 733, 1525
EcoT38I GRGCYC 1 cut(s) 325
FaeI CATG 8 cut(s) 636, 704, 731, 755, 1304, 1394, 1496, 1523
FaqI GGGAC 2 cut(s) 665, 1374
FatI CATG 8 cut(s) 632, 700, 727, 751, 1300, 1390, 1492, 1519
Fnu4HI GCNGC 1 cut(s) 1262
FokI GGATG 2 cut(s) 299, 1631
FriOI GRGCYC 1 cut(s) 325
Fsp4HI GCNGC 1 cut(s) 1262
FspBI CTAG 3 cut(s) 119, 438, 1550
GlaI GCGC 1 cut(s) 1491
GluI GCNGC 1 cut(s) 1262
HaeIII GGCC 5 cut(s) 90, 158, 401, 934, 1548
HapII CCGG 2 cut(s) 223, 1015
HgaI GACGC 1 cut(s) 826
HhaI GCGC 1 cut(s) 1492
Hin1II CATG 8 cut(s) 636, 704, 731, 755, 1304, 1394, 1496, 1523
Hin6I GCGC 1 cut(s) 1490
HinP1I GCGC 1 cut(s) 1490
HincII GTYRAC 1 cut(s) 1668
HindII GTYRAC 1 cut(s) 1668
HindIII AAGCTT 3 cut(s) 1025, 1625, 1730
HinfI GANTC 5 cut(s) 375, 985, 1065, 1639, 1648
HpaI GTTAAC 1 cut(s) 1668
HpaII CCGG 2 cut(s) 223, 1015
Hpy166II GTNNAC 3 cut(s) 296, 862, 1668
Hpy188I TCNGA 3 cut(s) 288, 1080, 1644
Hpy188III TCNNGA 2 cut(s) 1461, 1595
Hpy8I GTNNAC 3 cut(s) 296, 862, 1668
Hpy99I CGWCG 3 cut(s) 164, 860, 884
HpyAV CCTTC 5 cut(s) 515, 701, 1135, 1307, 1493
HpyCH4III ACNGT 4 cut(s) 126, 586, 656, 1061
HpyCH4IV ACGT 6 cut(s) 344, 450, 497, 855, 1289, 1581
HpyCH4V TGCA 7 cut(s) 103, 731, 895, 938, 956, 1304, 1523
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 119
HpyF3I CTNAG 6 cut(s) 685, 742, 871, 1534, 1635, 1641
HpySE526I ACGT 6 cut(s) 344, 450, 497, 855, 1289, 1581
Hsp92II CATG 8 cut(s) 636, 704, 731, 755, 1304, 1394, 1496, 1523
HspAI GCGC 1 cut(s) 1490
KspAI GTTAAC 1 cut(s) 1668
Kzo9I GATC 5 cut(s) 13, 681, 1112, 1191, 1340
LguI GCTCTTC 2 cut(s) 120, 1648
LmnI GCTCC 1 cut(s) 919
Lsp1109I GCAGC 1 cut(s) 1273
LweI GCATC 1 cut(s) 321
MaeI CTAG 3 cut(s) 119, 438, 1550
MaeII ACGT 6 cut(s) 344, 450, 497, 855, 1289, 1581
MaeIII GTNAC 4 cut(s) 190, 778, 814, 1178
MalI GATC 5 cut(s) 15, 683, 1114, 1193, 1342
MboI GATC 5 cut(s) 13, 681, 1112, 1191, 1340
MboII GAAGA 7 cut(s) 107, 227, 479, 1186, 1271, 1657, 1665
MfeI CAATTG 3 cut(s) 513, 951, 1305
MflI RGATCY 2 cut(s) 681, 1191
MhlI GDGCHC 1 cut(s) 325
MlyI GAGTC 2 cut(s) 1074, 1633
MmeI TCCRAC 4 cut(s) 433, 1169, 1225, 1585
Mph1103I ATGCAT 2 cut(s) 733, 1525
MroXI GAANNNNTTC 1 cut(s) 1408
MseI TTAA 7 cut(s) 369, 443, 461, 614, 1475, 1661, 1667
MslI CAYNNNNRTG 2 cut(s) 182, 301
MspI CCGG 2 cut(s) 223, 1015
MunI CAATTG 3 cut(s) 513, 951, 1305
Mva1269I GAATGC 1 cut(s) 555
MwoI GCNNNNNNNGC 2 cut(s) 83, 119
NdeII GATC 5 cut(s) 13, 681, 1112, 1191, 1340
NlaIII CATG 8 cut(s) 636, 704, 731, 755, 1304, 1394, 1496, 1523
NlaIV GGNNCC 2 cut(s) 212, 1146
NmeAIII GCCGAG 2 cut(s) 727, 1519
NmuCI GTSAC 2 cut(s) 814, 1178
NsiI ATGCAT 2 cut(s) 733, 1525
OliI CACNNNNGTG 2 cut(s) 182, 301
PciSI GCTCTTC 2 cut(s) 120, 1648
PctI GAATGC 1 cut(s) 555
PdmI GAANNNNTTC 1 cut(s) 1408
PfeI GAWTC 3 cut(s) 375, 985, 1648
PkrI GCNGC 1 cut(s) 1263
PleI GAGTC 2 cut(s) 1073, 1633
PpsI GAGTC 2 cut(s) 1073, 1633
Ppu21I YACGTR 3 cut(s) 498, 1290, 1582
PpuMI RGGWCCY 1 cut(s) 1144
Psp124BI GAGCTC 1 cut(s) 325
Psp1406I AACGTT 1 cut(s) 450
Psp5II RGGWCCY 1 cut(s) 1144
PspN4I GGNNCC 2 cut(s) 212, 1146
PspPI GGNCC 2 cut(s) 399, 1144
PspPPI RGGWCCY 1 cut(s) 1144
PsuI RGATCY 2 cut(s) 681, 1191
RsaI GTAC 3 cut(s) 500, 1292, 1580
RsaNI GTAC 3 cut(s) 499, 1291, 1579
RseI CAYNNNNRTG 2 cut(s) 182, 301
SacI GAGCTC 1 cut(s) 325
SapI GCTCTTC 2 cut(s) 120, 1648
SaqAI TTAA 7 cut(s) 369, 443, 461, 614, 1475, 1661, 1667
SatI GCNGC 1 cut(s) 1262
Sau3AI GATC 5 cut(s) 13, 681, 1112, 1191, 1340
Sau96I GGNCC 2 cut(s) 399, 1144
SchI GAGTC 2 cut(s) 1074, 1633
SduI GDGCHC 1 cut(s) 325
SfaNI GCATC 1 cut(s) 321
SfcI CTRYAG 3 cut(s) 478, 540, 1270
SinI GGWCC 1 cut(s) 1144
SmiMI CAYNNNNRTG 2 cut(s) 182, 301
SmlI CTYRAG 1 cut(s) 299
SmoI CTYRAG 1 cut(s) 299
SnaBI TACGTA 3 cut(s) 498, 1290, 1582
SsiI CCGC 1 cut(s) 1088
SspI AATATT 1 cut(s) 1046
SspMI CTAG 3 cut(s) 119, 438, 1550
SstI GAGCTC 1 cut(s) 325
TaaI ACNGT 4 cut(s) 126, 586, 656, 1061
TaiI ACGT 6 cut(s) 347, 453, 500, 858, 1292, 1584
TaqI TCGA 4 cut(s) 69, 1197, 1462, 1651
TfiI GAWTC 3 cut(s) 375, 985, 1648
Tru1I TTAA 7 cut(s) 369, 443, 461, 614, 1475, 1661, 1667
Tru9I TTAA 7 cut(s) 369, 443, 461, 614, 1475, 1661, 1667
TscAI CASTG 2 cut(s) 661, 827
TseFI GTSAC 2 cut(s) 814, 1178
TseI GCWGC 1 cut(s) 1261
Tsp45I GTSAC 2 cut(s) 814, 1178
TspDTI ATGAA 8 cut(s) 119, 447, 479, 497, 911, 1239, 1271, 1289
TspGWI ACGGA 1 cut(s) 1631
TspRI CASTG 2 cut(s) 661, 827
VpaK11BI GGWCC 1 cut(s) 1144
XapI RAATTY 3 cut(s) 616, 833, 1408
XcmI CCANNNNNNNNNTGG 3 cut(s) 605, 807, 1397
XmnI GAANNNNTTC 1 cut(s) 1408
XspI CTAG 3 cut(s) 119, 438, 1550
Zsp2I ATGCAT 2 cut(s) 733, 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.