Prupe.4G228800_v2.0.a1

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
14616357 .. 14621083
4727 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G228800.1

Sequence Viewer

Length: 591 bp
ATGAAGTCATGTGGAGAATTTTTGGGGAGGACATGGAACATACAAGACGTATTCACATTGGGTGTGATTTTGGCCTTGCATTCTCTTTGTGCATTTGCGCCCTTTCATTTCAATTGGCCTGCATTTTGGGTCGCCGTCACTTTGTACGTTGTGACGGCTTTAGGAATCACACTGTGCTACCATAGAACTCTTACCCACAGAGGTTTGAGGCTTCCAAAATGGCTCGAGTACCTCTTTGCCTATTGTGGTGTTCTGTCACTTCAGGGGGTGAGGACGGTACTTCTTTTCGACGCCACTCTGATTATAAATTCAGTTGGCCACATGTGGGGAAAGAAACCATGGAACACCGGTGATATGTCTACAAACAATTGGTGGATGTCAATTATTACGCTTGGAGAAGGATGGCATAATAACCACCATGCTTTTGAATACTCAGCTAGACATGGGTTGGAATGGTGGCAAATTGATATTACTTGGTACGTAATAAGATTTCTTCAAGCTATTGGATTGGCAACAGATGTCAAGGTCCCAACTGAAATTCAAAAGCAACGAAAAGCTTCAAATGGTAGAATCATGGCTACTCAAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

197

Amino Acids

22.61

Weight (kDa)

9.3

Isoelectric Point (pI)

29.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 305
AccI GTMKAC 1 cut(s) 359
AcoI YGGCCR 1 cut(s) 316
AcsI RAATTY 3 cut(s) 17, 307, 537
AcuI CTGAAG 1 cut(s) 245
AcyI GRCGYC 1 cut(s) 291
AdeI CACNNNGTG 1 cut(s) 174
AfaI GTAC 4 cut(s) 146, 230, 279, 479
AfiI CCNNNNNNNGG 1 cut(s) 325
AflIII ACRYGT 1 cut(s) 321
AgeI ACCGGT 1 cut(s) 347
AgsI TTSAA 5 cut(s) 112, 428, 497, 542, 561
AluBI AGCT 3 cut(s) 437, 500, 557
AluI AGCT 3 cut(s) 437, 500, 557
Ama87I CYCGRG 1 cut(s) 224
AoxI GGCC 3 cut(s) 72, 116, 316
ApoI RAATTY 3 cut(s) 17, 307, 537
AsiGI ACCGGT 1 cut(s) 347
Asp700I GAANNNNTTC 1 cut(s) 556
AspLEI GCGC 1 cut(s) 100
AspS9I GGNCC 1 cut(s) 526
AsuHPI GGTGA 2 cut(s) 280, 362
AvaI CYCGRG 1 cut(s) 224
AvaII GGWCC 1 cut(s) 526
BalI TGGCCA 1 cut(s) 318
BccI CCATC 1 cut(s) 396
BceAI ACGGC 2 cut(s) 119, 171
BfaI CTAG 1 cut(s) 438
Bme18I GGWCC 1 cut(s) 526
BmeT110I CYCGRG 1 cut(s) 224
BmgT120I GGNCC 1 cut(s) 526
BmiI GGNNCC 1 cut(s) 528
BsaAI YACGTR 1 cut(s) 481
BsaHI GRCGYC 1 cut(s) 291
BsaJI CCNNGG 1 cut(s) 338
BsaWI WCCGGW 1 cut(s) 347
Bsc4I CCNNNNNNNGG 1 cut(s) 325
Bse118I RCCGGY 1 cut(s) 347
BseDI CCNNGG 1 cut(s) 338
BseGI GGATG 2 cut(s) 381, 407
BseLI CCNNNNNNNGG 1 cut(s) 325
BseMII CTCAG 1 cut(s) 447
BshFI GGCC 3 cut(s) 74, 118, 318
BshTI ACCGGT 1 cut(s) 347
BsiHKCI CYCGRG 1 cut(s) 224
BsiSI CCGG 1 cut(s) 348
BslFI GGGAC 1 cut(s) 512
BslI CCNNNNNNNGG 1 cut(s) 325
BsmFI GGGAC 1 cut(s) 512
BsmI GAATGC 1 cut(s) 79
BsnI GGCC 3 cut(s) 74, 118, 318
BsoBI CYCGRG 1 cut(s) 224
Bsp19I CCATGG 1 cut(s) 338
BspANI GGCC 3 cut(s) 74, 118, 318
BspCNI CTCAG 1 cut(s) 446
BspLI GGNNCC 1 cut(s) 528
BsrFI RCCGGY 1 cut(s) 347
BssAI RCCGGY 1 cut(s) 347
BssECI CCNNGG 1 cut(s) 338
BssNI GRCGYC 1 cut(s) 291
BssT1I CCWWGG 1 cut(s) 338
Bst4CI ACNGT 2 cut(s) 174, 277
BstACI GRCGYC 1 cut(s) 291
BstBAI YACGTR 1 cut(s) 481
BstC8I GCNNGC 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 433
BstDSI CCRYGG 1 cut(s) 338
BstF5I GGATG 2 cut(s) 381, 407
BstHHI GCGC 1 cut(s) 100
BstNSI RCATGY 1 cut(s) 325
BstSNI TACGTA 1 cut(s) 481
BsuRI GGCC 3 cut(s) 74, 118, 318
BtgI CCRYGG 1 cut(s) 338
BtsCI GGATG 2 cut(s) 381, 407
BtsIMutI CAGTG 1 cut(s) 170
Cac8I GCNNGC 1 cut(s) 120
CfoI GCGC 1 cut(s) 100
Cfr10I RCCGGY 1 cut(s) 347
Cfr13I GGNCC 1 cut(s) 526
CseI GACGC 1 cut(s) 299
Csp6I GTAC 4 cut(s) 145, 229, 278, 478
CspAI ACCGGT 1 cut(s) 347
CviAII CATG 7 cut(s) 9, 33, 322, 339, 419, 443, 574
CviQI GTAC 4 cut(s) 145, 229, 278, 478
DdeI CTNAG 1 cut(s) 433
DraIII CACNNNGTG 1 cut(s) 174
EaeI YGGCCR 1 cut(s) 316
Eco105I TACGTA 1 cut(s) 481
Eco130I CCWWGG 1 cut(s) 338
Eco47I GGWCC 1 cut(s) 526
Eco57I CTGAAG 1 cut(s) 245
Eco88I CYCGRG 1 cut(s) 224
EcoO109I RGGNCCY 1 cut(s) 526
EcoT14I CCWWGG 1 cut(s) 338
ErhI CCWWGG 1 cut(s) 338
FaeI CATG 7 cut(s) 12, 36, 325, 342, 422, 446, 577
FaqI GGGAC 1 cut(s) 512
FatI CATG 7 cut(s) 8, 32, 321, 338, 418, 442, 573
FblI GTMKAC 1 cut(s) 359
FokI GGATG 2 cut(s) 388, 414
FspBI CTAG 1 cut(s) 438
GlaI GCGC 1 cut(s) 99
HaeIII GGCC 3 cut(s) 74, 118, 318
HapII CCGG 1 cut(s) 348
HgaI GACGC 1 cut(s) 299
HhaI GCGC 1 cut(s) 100
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 7 cut(s) 12, 36, 325, 342, 422, 446, 577
Hin6I GCGC 1 cut(s) 98
HinP1I GCGC 1 cut(s) 98
HindIII AAGCTT 1 cut(s) 555
HinfI GANTC 2 cut(s) 165, 570
HpaII CCGG 1 cut(s) 348
HphI GGTGA 2 cut(s) 280, 362
Hpy166II GTNNAC 1 cut(s) 360
Hpy188I TCNGA 1 cut(s) 300
Hpy8I GTNNAC 1 cut(s) 360
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 1 cut(s) 392
HpyCH4III ACNGT 2 cut(s) 174, 277
HpyCH4IV ACGT 3 cut(s) 48, 147, 480
HpyCH4V TGCA 3 cut(s) 79, 92, 122
HpyF3I CTNAG 1 cut(s) 433
HpySE526I ACGT 3 cut(s) 48, 147, 480
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 7 cut(s) 12, 36, 325, 342, 422, 446, 577
HspAI GCGC 1 cut(s) 98
LpnPI CCDG 3 cut(s) 132, 248, 361
MaeI CTAG 1 cut(s) 438
MaeII ACGT 3 cut(s) 48, 147, 480
MaeIII GTNAC 3 cut(s) 136, 151, 255
MboII GAAGA 1 cut(s) 485
MfeI CAATTG 2 cut(s) 112, 367
MlsI TGGCCA 1 cut(s) 318
MluCI AATT 7 cut(s) 17, 112, 307, 367, 381, 462, 537
MluNI TGGCCA 1 cut(s) 318
MmeI TCCRAC 1 cut(s) 429
MnlI CCTC 5 cut(s) 21, 194, 201, 242, 264
Mox20I TGGCCA 1 cut(s) 318
MroXI GAANNNNTTC 1 cut(s) 556
MscI TGGCCA 1 cut(s) 318
Msp20I TGGCCA 1 cut(s) 318
MspI CCGG 1 cut(s) 348
MunI CAATTG 2 cut(s) 112, 367
Mva1269I GAATGC 1 cut(s) 79
NcoI CCATGG 1 cut(s) 338
NlaIII CATG 7 cut(s) 12, 36, 325, 342, 422, 446, 577
NlaIV GGNNCC 1 cut(s) 528
NmuCI GTSAC 3 cut(s) 136, 151, 255
NspI RCATGY 1 cut(s) 325
PaeR7I CTCGAG 1 cut(s) 224
PciI ACATGT 1 cut(s) 321
PctI GAATGC 1 cut(s) 79
PdmI GAANNNNTTC 1 cut(s) 556
PfeI GAWTC 2 cut(s) 165, 570
PinAI ACCGGT 1 cut(s) 347
Ppu21I YACGTR 1 cut(s) 481
PpuMI RGGWCCY 1 cut(s) 526
PscI ACATGT 1 cut(s) 321
PsiI TTATAA 1 cut(s) 305
Psp5II RGGWCCY 1 cut(s) 526
PspN4I GGNNCC 1 cut(s) 528
PspPI GGNCC 1 cut(s) 526
PspPPI RGGWCCY 1 cut(s) 526
PspXI VCTCGAGB 1 cut(s) 224
RsaI GTAC 4 cut(s) 146, 230, 279, 479
RsaNI GTAC 4 cut(s) 145, 229, 278, 478
Sau96I GGNCC 1 cut(s) 526
SetI ASST 9 cut(s) 51, 150, 205, 234, 439, 483, 502, 528, 559
Sfr274I CTCGAG 1 cut(s) 224
SgrAI CRCCGGYG 1 cut(s) 347
SinI GGWCC 1 cut(s) 526
SlaI CTCGAG 1 cut(s) 224
SmlI CTYRAG 1 cut(s) 224
SmoI CTYRAG 1 cut(s) 224
SnaBI TACGTA 1 cut(s) 481
Sse9I AATT 7 cut(s) 17, 112, 307, 367, 381, 462, 537
SspMI CTAG 1 cut(s) 438
StyI CCWWGG 1 cut(s) 338
TaaI ACNGT 2 cut(s) 174, 277
TaiI ACGT 3 cut(s) 51, 150, 483
TaqI TCGA 2 cut(s) 225, 288
TasI AATT 7 cut(s) 17, 112, 307, 367, 381, 462, 537
TfiI GAWTC 2 cut(s) 165, 570
TscAI CASTG 1 cut(s) 177
TseFI GTSAC 3 cut(s) 136, 151, 255
Tsp45I GTSAC 3 cut(s) 136, 151, 255
TspDTI ATGAA 2 cut(s) 17, 95
TspRI CASTG 1 cut(s) 177
VpaK11BI GGWCC 1 cut(s) 526
XapI RAATTY 3 cut(s) 17, 307, 537
XceI RCATGY 1 cut(s) 325
XhoI CTCGAG 1 cut(s) 224
XmiI GTMKAC 1 cut(s) 359
XmnI GAANNNNTTC 1 cut(s) 556
XspI CTAG 1 cut(s) 438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.