Rorug02G0463400

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000059
Physical Location & Seq
Forward (+)
59448433 .. 59453630
5198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0463400.1

Sequence Viewer

Length: 1455 bp
ATGGGTTCCAGATTCCCATCTCACCAACTCAGCAATGGCCTTTACGTATCAGGCCGGCCAGAGCAACCAAAGGAAAGGACTCCAACTATGAGCTCAGTTGCCACACCTTATACTGGTGGAGATATCAAGAAGTCTGGAGAACTAGGAAAGATGTTTGATATCCCTACAGATGGCTCCAAGTCCAGAAAATCTGGACCTATCACTGGTGGTTCTTCTAGGACTGGATCATTTGGAGGTGCTGCTTCACATTCAGGACCAATTCCTAACGCTGCAGGTCGTGCCGGCTATACTACATCAGGTCCCATATCTGGAGGCATGCCTGGTTCAGCTTCCGTAAAGAAGTCAAATTCTGGACCACTGAATAAGCATGGGGAACCCATGAAGAAGTCATCTGGTCCTCAATCTGGTGGGGTAACACCAACTGGCCGCCAAAACTCTGGGCCTCTTCCCCCCGTACTCCCAACCACAGGTCTCATTACTTCTGGACCCATTTCTTCTGGCCCACTAAATGCTTCTGGGGCCCCTCGAAAGTTATCCGGTCCTTTGGAGTCAATGGGATCAATGAAAGTACAAGGTTCCTCTCTTGTTCACAATCAGGCCATTACTACTCTTAGCCAAGATGATGAGTTTTCGTTTAGGAAAAACTTCCCAAAGCCAATATTATGGTCTTTGATTCTGCTTTTCATGATGGGGTTCATAGCTGGTGGTTTTATTCTCGGTGCGGTCCATAATCCAATTCTCCTCGTCGTGGTTGTGATCCTTTTCAGTGCAGTTGCTGCACTATTCACATGGAATACTTATTGGGGAAGAAGAGCTATTATAGGTTACATTGCTAGTTATTCGGATTCTGAGCTCAGAACTGCCAAGAATGGGCAATTTGTGAAGGTGTCAGGGGTGGTTACTTGTGGCAATGTGCCTCTCGAGTCATCCTTTCAAAAGGTTCCTAGATGTGTGTATACATCCACAAGTTTGTATGAGTATCGAGGATGGGATTCAAAAGCTGCCAACCCTACACATCGTCGTTTTTCTTGGGGCCTCAGATCCATGGAAAGACGTGTGGTAGACTTCTACATCTCTGATTTCCAATCTGGGTTGAGAGCATTGGTTAAGACAGGCTGTGGAGCAAGGGTGACACCTTATGTTGATGATTCAATTGTCATTGATGTGAATCCCGTTAATGAAGAGTTGTCTCCAGAGTTTATTAGGTGGTTGAGGGAGAGGAACCTTTCAAGTGATGATCGTGTGATGCAGTTGAAAGAAGGGTACATTAAAGAAGGAAGCACAGTCAGTGTAATGGGGGTCGTCCGGAGAAATGAAAATGTGTTGATGATTGTTCCTCCACCTGAGCCGATCACAACGGGATGCCAATGGGCCAAATGTGTCTTCCCAGCTAGCCTTGAGGGCATCGTTTTGAGATGCGATGATGCATCAAAGAATGATGTCATACCAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FA_desaturase

Protein Analysis

484

Amino Acids

51.81

Weight (kDa)

9.59

Isoelectric Point (pI)

37.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 263
AccI GTMKAC 2 cut(s) 956, 1062
AccIII TCCGGA 1 cut(s) 1305
AciI CCGC 2 cut(s) 427, 722
AclWI GGATC 4 cut(s) 232, 565, 751, 1035
AcoI YGGCCR 2 cut(s) 56, 424
AcsI RAATTY 1 cut(s) 346
AfaI GTAC 3 cut(s) 456, 570, 1265
AfiI CCNNNNNNNGG 8 cut(s) 113, 170, 203, 308, 404, 467, 748, 870
AflIII ACRYGT 1 cut(s) 1054
AgsI TTSAA 5 cut(s) 935, 996, 1152, 1230, 1255
AjiI CACGTC 1 cut(s) 1055
AjnI CCWGG 1 cut(s) 319
AjuI GAANNNNNNNTTGG 2 cut(s) 1367, 1399
AluBI AGCT 7 cut(s) 93, 329, 701, 815, 853, 1001, 1391
AluI AGCT 7 cut(s) 93, 329, 701, 815, 853, 1001, 1391
Alw21I GWGCWC 2 cut(s) 95, 855
Alw26I GTCTC 2 cut(s) 476, 1194
AlwI GGATC 4 cut(s) 232, 565, 751, 1035
AlwNI CAGNNNCTG 1 cut(s) 776
Ama87I CYCGRG 1 cut(s) 920
Aor13HI TCCGGA 1 cut(s) 1305
ApaI GGGCCC 1 cut(s) 523
ApeKI GCWGC 4 cut(s) 239, 269, 776, 1001
ApoI RAATTY 1 cut(s) 346
Asp700I GAANNNNTTC 1 cut(s) 644
AsuHPI GGTGA 2 cut(s) 14, 1141
AsuNHI GCTAGC 1 cut(s) 1391
AvaI CYCGRG 1 cut(s) 920
AvaII GGWCC 8 cut(s) 194, 254, 299, 353, 395, 485, 539, 724
BaeGI GKGCMC 1 cut(s) 523
BanII GRGCYC 3 cut(s) 95, 523, 855
BbsI GAAGAC 1 cut(s) 1375
Bbv12I GWGCWC 2 cut(s) 95, 855
BbvI GCAGC 4 cut(s) 226, 256, 763, 988
BccI CCATC 4 cut(s) 25, 164, 682, 981
BciT130I CCWGG 1 cut(s) 321
BcoDI GTCTC 2 cut(s) 476, 1194
BfaI CTAG 5 cut(s) 143, 216, 834, 945, 1392
BfmI CTRYAG 2 cut(s) 165, 270
BfuAI ACCTGC 1 cut(s) 263
BglI GCCNNNNNGGC 1 cut(s) 1401
BisI GCNGC 5 cut(s) 240, 270, 427, 777, 1002
BlsI GCNGC 5 cut(s) 241, 271, 428, 778, 1003
Bme1390I CCNGG 1 cut(s) 321
Bme18I GGWCC 8 cut(s) 194, 254, 299, 353, 395, 485, 539, 724
BmeT110I CYCGRG 1 cut(s) 920
BmgBI CACGTC 1 cut(s) 1055
BmrFI CCNGG 1 cut(s) 321
BmsI GCATC 6 cut(s) 1236, 1352, 1406, 1413, 1414, 1436
BmtI GCTAGC 1 cut(s) 1395
BpiI GAAGAC 1 cut(s) 1375
BpmI CTGGAG 3 cut(s) 156, 330, 1176
Bpu10I CCTNAGC 1 cut(s) 1344
BpuEI CTTGAG 1 cut(s) 1418
BsaAI YACGTR 1 cut(s) 46
BsaBI GATNNNNATC 2 cut(s) 16, 1167
BsaI GGTCTC 1 cut(s) 476
BsaJI CCNNGG 1 cut(s) 1044
BsaWI WCCGGW 2 cut(s) 536, 1305
BsaXI ACNNNNNCTCC 2 cut(s) 1113, 1143
Bsc4I CCNNNNNNNGG 8 cut(s) 113, 170, 203, 308, 404, 467, 748, 870
Bse118I RCCGGY 2 cut(s) 54, 281
Bse1I ACTGG 5 cut(s) 118, 208, 226, 427, 1448
Bse3DI GCAATG 3 cut(s) 40, 828, 916
Bse8I GATNNNNATC 2 cut(s) 16, 1167
BseAI TCCGGA 1 cut(s) 1305
BseBI CCWGG 1 cut(s) 321
BseDI CCNNGG 1 cut(s) 1044
BseGI GGATG 4 cut(s) 926, 959, 992, 1367
BseJI GATNNNNATC 2 cut(s) 16, 1167
BseLI CCNNNNNNNGG 8 cut(s) 113, 170, 203, 308, 404, 467, 748, 870
BseMI GCAATG 3 cut(s) 40, 828, 916
BseMII CTCAG 6 cut(s) 43, 108, 840, 868, 1051, 1335
BseNI ACTGG 5 cut(s) 118, 208, 226, 427, 1448
BseRI GAGGAG 1 cut(s) 731
BseSI GKGCMC 1 cut(s) 523
BseXI GCAGC 4 cut(s) 226, 256, 763, 988
BseYI CCCAGC 1 cut(s) 1387
BsgI GTGCAG 2 cut(s) 762, 789
BsiHKAI GWGCWC 2 cut(s) 95, 855
BsiHKCI CYCGRG 1 cut(s) 920
BsiSI CCGG 4 cut(s) 55, 282, 537, 1306
BslFI GGGAC 1 cut(s) 285
BslI CCNNNNNNNGG 8 cut(s) 113, 170, 203, 308, 404, 467, 748, 870
BsmAI GTCTC 2 cut(s) 476, 1194
BsmFI GGGAC 1 cut(s) 285
Bso31I GGTCTC 1 cut(s) 476
BsoBI CYCGRG 1 cut(s) 920
Bsp120I GGGCCC 1 cut(s) 519
Bsp1286I GDGCHC 3 cut(s) 95, 523, 855
Bsp13I TCCGGA 1 cut(s) 1305
Bsp143I GATC 6 cut(s) 224, 557, 756, 1040, 1237, 1350
Bsp19I CCATGG 1 cut(s) 1044
BspACI CCGC 2 cut(s) 427, 722
BspCNI CTCAG 6 cut(s) 42, 107, 841, 867, 1050, 1336
BspEI TCCGGA 1 cut(s) 1305
BspHI TCATGA 1 cut(s) 684
BspMAI CTGCAG 1 cut(s) 274
BspMI ACCTGC 1 cut(s) 263
BspOI GCTAGC 1 cut(s) 1395
BspPI GGATC 4 cut(s) 232, 565, 751, 1035
BspQI GCTCTTC 1 cut(s) 805
BspTNI GGTCTC 1 cut(s) 476
BsrDI GCAATG 3 cut(s) 40, 828, 916
BsrFI RCCGGY 2 cut(s) 54, 281
BsrI ACTGG 5 cut(s) 118, 208, 226, 427, 1448
BssAI RCCGGY 2 cut(s) 54, 281
BssECI CCNNGG 1 cut(s) 1044
BssMI GATC 6 cut(s) 224, 557, 756, 1040, 1237, 1350
BssNAI GTATAC 1 cut(s) 957
BssT1I CCWWGG 1 cut(s) 1044
Bst1107I GTATAC 1 cut(s) 957
Bst2UI CCWGG 1 cut(s) 321
Bst4CI ACNGT 1 cut(s) 1285
Bst6I CTCTTC 3 cut(s) 450, 805, 1176
BstAPI GCANNNNNTGC 2 cut(s) 278, 776
BstBAI YACGTR 1 cut(s) 46
BstC8I GCNNGC 4 cut(s) 56, 283, 317, 1393
BstDEI CTNAG 7 cut(s) 29, 94, 611, 849, 854, 1037, 1344
BstDSI CCRYGG 1 cut(s) 1044
BstF5I GGATG 4 cut(s) 926, 959, 992, 1367
BstKTI GATC 6 cut(s) 227, 560, 759, 1043, 1240, 1353
BstMAI GTCTC 2 cut(s) 476, 1194
BstMBI GATC 6 cut(s) 224, 557, 756, 1040, 1237, 1350
BstMWI GCNNNNNNNGC 4 cut(s) 278, 518, 776, 1401
BstNI CCWGG 1 cut(s) 321
BstNSI RCATGY 1 cut(s) 319
BstSCI CCNGG 1 cut(s) 319
BstSFI CTRYAG 2 cut(s) 165, 270
BstSLI GKGCMC 1 cut(s) 523
BstSNI TACGTA 1 cut(s) 46
BstV1I GCAGC 4 cut(s) 226, 256, 763, 988
BstV2I GAAGAC 1 cut(s) 1375
BstX2I RGATCY 1 cut(s) 1040
BstXI CCANNNNNNTGG 2 cut(s) 437, 663
BstYI RGATCY 1 cut(s) 1040
BstZ17I GTATAC 1 cut(s) 957
BtgI CCRYGG 1 cut(s) 1044
BtgZI GCGATG 1 cut(s) 1434
BtrI CACGTC 1 cut(s) 1055
BtsCI GGATG 4 cut(s) 926, 959, 992, 1367
BtsIMutI CAGTG 4 cut(s) 201, 356, 772, 1294
BveI ACCTGC 1 cut(s) 263
Cac8I GCNNGC 4 cut(s) 56, 283, 317, 1393
CaiI CAGNNNCTG 1 cut(s) 776
CciI TCATGA 1 cut(s) 684
Cfr10I RCCGGY 2 cut(s) 54, 281
Csp6I GTAC 3 cut(s) 455, 569, 1264
CviAII CATG 6 cut(s) 316, 368, 379, 685, 789, 1045
CviQI GTAC 3 cut(s) 455, 569, 1264
DdeI CTNAG 7 cut(s) 29, 94, 611, 849, 854, 1037, 1344
DpnI GATC 6 cut(s) 226, 559, 758, 1042, 1239, 1352
DpnII GATC 6 cut(s) 224, 557, 756, 1040, 1237, 1350
EaeI YGGCCR 2 cut(s) 56, 424
Eam1104I CTCTTC 3 cut(s) 450, 805, 1176
EarI CTCTTC 3 cut(s) 450, 805, 1176
Ecl136II GAGCTC 2 cut(s) 93, 853
Eco105I TACGTA 1 cut(s) 46
Eco130I CCWWGG 1 cut(s) 1044
Eco24I GRGCYC 3 cut(s) 95, 523, 855
Eco31I GGTCTC 1 cut(s) 476
Eco32I GATATC 2 cut(s) 124, 160
Eco47I GGWCC 8 cut(s) 194, 254, 299, 353, 395, 485, 539, 724
Eco53kI GAGCTC 2 cut(s) 93, 853
Eco88I CYCGRG 1 cut(s) 920
EcoICRI GAGCTC 2 cut(s) 93, 853
EcoO109I RGGNCCY 4 cut(s) 299, 519, 520, 1033
EcoRII CCWGG 1 cut(s) 319
EcoRV GATATC 2 cut(s) 124, 160
EcoT14I CCWWGG 1 cut(s) 1044
EcoT22I ATGCAT 1 cut(s) 1429
EcoT38I GRGCYC 3 cut(s) 95, 523, 855
ErhI CCWWGG 1 cut(s) 1044
FaeI CATG 6 cut(s) 319, 371, 382, 688, 792, 1048
FaqI GGGAC 1 cut(s) 285
FatI CATG 6 cut(s) 315, 367, 378, 684, 788, 1044
FblI GTMKAC 2 cut(s) 956, 1062
Fnu4HI GCNGC 5 cut(s) 240, 270, 427, 777, 1002
FokI GGATG 4 cut(s) 913, 946, 999, 1374
FriOI GRGCYC 3 cut(s) 95, 523, 855
FseI GGCCGGCC 1 cut(s) 58
Fsp4HI GCNGC 5 cut(s) 240, 270, 427, 777, 1002
FspBI CTAG 5 cut(s) 143, 216, 834, 945, 1392
GluI GCNGC 5 cut(s) 240, 270, 427, 777, 1002
GsaI CCCAGC 1 cut(s) 1391
GsuI CTGGAG 3 cut(s) 156, 330, 1176
HapII CCGG 4 cut(s) 55, 282, 537, 1306
Hin1II CATG 6 cut(s) 319, 371, 382, 688, 792, 1048
HinfI GANTC 9 cut(s) 12, 79, 548, 673, 845, 923, 992, 1148, 1168
HpaII CCGG 4 cut(s) 55, 282, 537, 1306
HphI GGTGA 2 cut(s) 14, 1141
Hpy166II GTNNAC 3 cut(s) 589, 957, 1063
Hpy188I TCNGA 5 cut(s) 844, 850, 857, 1040, 1078
Hpy8I GTNNAC 3 cut(s) 589, 957, 1063
Hpy99I CGWCG 2 cut(s) 749, 1023
HpyAV CCTTC 3 cut(s) 877, 1253, 1268
HpyCH4III ACNGT 1 cut(s) 1285
HpyCH4IV ACGT 2 cut(s) 45, 1054
HpyCH4V TGCA 5 cut(s) 272, 770, 779, 1249, 1427
HpyF10VI GCNNNNNNNGC 4 cut(s) 278, 518, 776, 1401
HpyF3I CTNAG 7 cut(s) 29, 94, 611, 849, 854, 1037, 1344
HpySE526I ACGT 2 cut(s) 45, 1054
Hsp92II CATG 6 cut(s) 319, 371, 382, 688, 792, 1048
Kpn2I TCCGGA 1 cut(s) 1305
KroI GCCGGC 2 cut(s) 54, 281
KroNI GCCGGC 2 cut(s) 56, 283
Kzo9I GATC 6 cut(s) 224, 557, 756, 1040, 1237, 1350
LguI GCTCTTC 1 cut(s) 805
LmnI GCTCC 2 cut(s) 179, 1121
Lsp1109I GCAGC 4 cut(s) 226, 256, 763, 988
LweI GCATC 6 cut(s) 1236, 1352, 1406, 1413, 1414, 1436
MaeI CTAG 5 cut(s) 143, 216, 834, 945, 1392
MaeII ACGT 2 cut(s) 45, 1054
MaeIII GTNAC 4 cut(s) 412, 824, 898, 1129
MalI GATC 6 cut(s) 226, 559, 758, 1042, 1239, 1352
MboI GATC 6 cut(s) 224, 557, 756, 1040, 1237, 1350
MboII GAAGA 8 cut(s) 204, 394, 437, 486, 819, 822, 1193, 1375
MfeI CAATTG 1 cut(s) 1152
MflI RGATCY 1 cut(s) 1040
MhlI GDGCHC 3 cut(s) 95, 523, 855
MluCI AATT 5 cut(s) 258, 346, 735, 875, 1152
MlyI GAGTC 3 cut(s) 73, 557, 932
MmeI TCCRAC 1 cut(s) 107
Mph1103I ATGCAT 1 cut(s) 1429
MroI TCCGGA 1 cut(s) 1305
MroNI GCCGGC 2 cut(s) 54, 281
MroXI GAANNNNTTC 1 cut(s) 644
MseI TTAA 3 cut(s) 1107, 1176, 1269
MslI CAYNNNNRTG 1 cut(s) 1163
MspI CCGG 4 cut(s) 55, 282, 537, 1306
MspR9I CCNGG 1 cut(s) 321
MunI CAATTG 1 cut(s) 1152
MvaI CCWGG 1 cut(s) 321
MwoI GCNNNNNNNGC 4 cut(s) 278, 518, 776, 1401
NaeI GCCGGC 2 cut(s) 56, 283
NcoI CCATGG 1 cut(s) 1044
NdeII GATC 6 cut(s) 224, 557, 756, 1040, 1237, 1350
NgoMIV GCCGGC 2 cut(s) 54, 281
NheI GCTAGC 1 cut(s) 1391
NlaIII CATG 6 cut(s) 319, 371, 382, 688, 792, 1048
NmuCI GTSAC 1 cut(s) 1129
NsiI ATGCAT 1 cut(s) 1429
NspI RCATGY 1 cut(s) 319
PaeI GCATGC 1 cut(s) 319
PaeR7I CTCGAG 1 cut(s) 920
PagI TCATGA 1 cut(s) 684
PciSI GCTCTTC 1 cut(s) 805
PdiI GCCGGC 2 cut(s) 56, 283
PdmI GAANNNNTTC 1 cut(s) 644
PfeI GAWTC 6 cut(s) 12, 673, 845, 992, 1148, 1168
PkrI GCNGC 5 cut(s) 241, 271, 428, 778, 1003
PleI GAGTC 3 cut(s) 73, 556, 931
PpsI GAGTC 3 cut(s) 73, 556, 931
Ppu21I YACGTR 1 cut(s) 46
PpuMI RGGWCCY 1 cut(s) 299
Psp124BI GAGCTC 2 cut(s) 95, 855
Psp5II RGGWCCY 1 cut(s) 299
Psp6I CCWGG 1 cut(s) 319
PspFI CCCAGC 1 cut(s) 1387
PspGI CCWGG 1 cut(s) 319
PspOMI GGGCCC 1 cut(s) 519
PspPPI RGGWCCY 1 cut(s) 299
PstI CTGCAG 1 cut(s) 274
PstNI CAGNNNCTG 1 cut(s) 776
PsuI RGATCY 1 cut(s) 1040
RigI GGCCGGCC 1 cut(s) 58
RsaI GTAC 3 cut(s) 456, 570, 1265
RsaNI GTAC 3 cut(s) 455, 569, 1264
RseI CAYNNNNRTG 1 cut(s) 1163
SacI GAGCTC 2 cut(s) 95, 855
SapI GCTCTTC 1 cut(s) 805
SaqAI TTAA 3 cut(s) 1107, 1176, 1269
SatI GCNGC 5 cut(s) 240, 270, 427, 777, 1002
Sau3AI GATC 6 cut(s) 224, 557, 756, 1040, 1237, 1350
SchI GAGTC 3 cut(s) 73, 557, 932
ScrFI CCNGG 1 cut(s) 321
SduI GDGCHC 3 cut(s) 95, 523, 855
SfaNI GCATC 6 cut(s) 1236, 1352, 1406, 1413, 1414, 1436
SfcI CTRYAG 2 cut(s) 165, 270
Sfr274I CTCGAG 1 cut(s) 920
SinI GGWCC 8 cut(s) 194, 254, 299, 353, 395, 485, 539, 724
SlaI CTCGAG 1 cut(s) 920
SmiMI CAYNNNNRTG 1 cut(s) 1163
SmlI CTYRAG 2 cut(s) 920, 1397
SmoI CTYRAG 2 cut(s) 920, 1397
SnaBI TACGTA 1 cut(s) 46
SphI GCATGC 1 cut(s) 319
Sse9I AATT 5 cut(s) 258, 346, 735, 875, 1152
SsiI CCGC 2 cut(s) 427, 722
SspI AATATT 1 cut(s) 660
SspMI CTAG 5 cut(s) 143, 216, 834, 945, 1392
SstI GAGCTC 2 cut(s) 95, 855
StyD4I CCNGG 1 cut(s) 319
StyI CCWWGG 1 cut(s) 1044
TaaI ACNGT 1 cut(s) 1285
TaiI ACGT 2 cut(s) 48, 1057
TaqI TCGA 3 cut(s) 526, 921, 982
TasI AATT 5 cut(s) 258, 346, 735, 875, 1152
TatI WGTACW 1 cut(s) 568
TauI GCSGC 1 cut(s) 429
TfiI GAWTC 6 cut(s) 12, 673, 845, 992, 1148, 1168
Tru1I TTAA 3 cut(s) 1107, 1176, 1269
Tru9I TTAA 3 cut(s) 1107, 1176, 1269
TscAI CASTG 4 cut(s) 208, 363, 772, 1294
TseFI GTSAC 1 cut(s) 1129
TseI GCWGC 4 cut(s) 239, 269, 776, 1001
Tsp45I GTSAC 1 cut(s) 1129
TspDTI ATGAA 6 cut(s) 395, 578, 673, 685, 1194, 1329
TspGWI ACGGA 1 cut(s) 322
TspRI CASTG 4 cut(s) 208, 363, 772, 1294
VpaK11BI GGWCC 8 cut(s) 194, 254, 299, 353, 395, 485, 539, 724
XapI RAATTY 1 cut(s) 346
XceI RCATGY 1 cut(s) 319
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
XhoI CTCGAG 1 cut(s) 920
XmiI GTMKAC 2 cut(s) 956, 1062
XmnI GAANNNNTTC 1 cut(s) 644
XspI CTAG 5 cut(s) 143, 216, 834, 945, 1392
Zsp2I ATGCAT 1 cut(s) 1429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.