Rh5DG357700

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
53250689 .. 53269135
18447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG357700.1

Sequence Viewer

Length: 1035 bp
ATGGCCAAGGATAGCTGTTTGAGTCGCATGGCCGCCGGCGCAGCTGTCGGGGGCGCTGTCGGTTGTGCCGTCGGTGTGATGTATGGCTCATTTGAGGCTATAAGGTGTAAGGTGCCAGGGGTAGAGAAGATCAGAATCAAAAACGATTCTTGTTCTATTTACAATGGCGTTTTGGATGTTCAGTTAGACAGTATGGAGTTTAGGACTATAGTGCAGCAACTGATTGCTAGAAATGGGGGGACTTCAGTTTTAGCCCTCCACAGCCTCTGTTTGTTTGCTCCGTTTCATTTCACCTGGGCTGCATTTTGGGTGGCCACCGCACTCATTTTTGTCACCGGTTTGGGAGTCACTCTGGGTTTCCATAGACTCCTTGCGCACAAGAGTTTGCGGCTTCCCAAATGGGTCGAGTACTTGTTTGTCTATTTCGGGGTTCTCGCACTTCAGGGAAGTCCGATAGAATGGGTGAGTACACACCGATACCATCACCAGTTTACAGACACAGAGAGAGACCCTCACAGCCCCTTGAAGGGTTTCTGGTTTAGTCACATGGGTTGGATCCTTGATAGCACTTCTCGGTTTCGAAAATATGGAGGACTGAAGAACGTTGAGGATATGAAAAAGCAGTGGTTCTACAGATTTCTTCATCGTACATTCCTTGTACACATATTTGTTTTTGGAGCTTTGCTCTATGCCCTAGGTGGACTACCCTTCTTTATCTGGGGAATGGGAGTGAGGATGGTATATGTTTTCCACACCACTTTGCTAGTAAACTCGGCCGGACACATCTGGGGAAAACAAGTATGGAACACCGGCGACCTGTCAAAAAACAATTGGTTGTTGGGATGGATTGCACTTGGAGAAGGGTGGCACAACAACCATCATGCATTTGAATACTCAGCTCGACAAGGTCTGGAATGGTGGCAAGTCGACTTGACTTGGTATGTAATCAGAGCTCTTCAAGCAATTGGGTTGGCAACTGACGTCAAAGTTCCCACTGAATCTCAGATGGGTCGCAAAGCCCTCAAGAAATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

344

Amino Acids

39.13

Weight (kDa)

9.51

Isoelectric Point (pI)

29.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Romo1 PF10247 5 - 46 9.7e-09 Reactive mitochondrial oxygen species modulator 1
FA_desaturase PF00487 98 - 318 1.5e-19 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 984
Acc16I TGCGCA 1 cut(s) 375
AccB1I GGYRCC 1 cut(s) 112
AccI GTMKAC 1 cut(s) 927
AciI CCGC 3 cut(s) 33, 318, 388
AclI AACGTT 1 cut(s) 603
AclWI GGATC 2 cut(s) 550, 563
AcoI YGGCCR 4 cut(s) 3, 30, 312, 774
AcuI CTGAAG 3 cut(s) 228, 425, 617
AcyI GRCGYC 1 cut(s) 981
AfaI GTAC 4 cut(s) 410, 469, 649, 660
AfiI CCNNNNNNNGG 2 cut(s) 526, 527
AgeI ACCGGT 1 cut(s) 335
AgsI TTSAA 3 cut(s) 526, 890, 959
AjnI CCWGG 2 cut(s) 115, 293
AluBI AGCT 5 cut(s) 15, 44, 680, 899, 953
AluI AGCT 5 cut(s) 15, 44, 680, 899, 953
Alw21I GWGCWC 1 cut(s) 955
Alw26I GTCTC 1 cut(s) 501
AlwI GGATC 2 cut(s) 550, 563
AlwNI CAGNNNCTG 2 cut(s) 220, 267
AoxI GGCC 4 cut(s) 3, 30, 312, 774
ApeKI GCWGC 3 cut(s) 41, 214, 299
AsiGI ACCGGT 1 cut(s) 335
Asp700I GAANNNNTTC 1 cut(s) 530
AspA2I CCTAGG 1 cut(s) 694
AspLEI GCGC 3 cut(s) 41, 56, 376
AsuHPI GGTGA 4 cut(s) 283, 325, 475, 476
AsuII TTCGAA 1 cut(s) 580
AvrII CCTAGG 1 cut(s) 694
BalI TGGCCA 2 cut(s) 5, 314
BamHI GGATCC 1 cut(s) 555
BanI GGYRCC 1 cut(s) 112
BanII GRGCYC 1 cut(s) 955
Bbv12I GWGCWC 1 cut(s) 955
BbvI GCAGC 3 cut(s) 53, 226, 286
BccI CCATC 5 cut(s) 489, 730, 837, 885, 1000
BceAI ACGGC 1 cut(s) 53
BciT130I CCWGG 2 cut(s) 117, 295
BcoDI GTCTC 1 cut(s) 501
BfaI CTAG 3 cut(s) 228, 695, 764
BfmI CTRYAG 2 cut(s) 207, 631
BfoI RGCGCY 1 cut(s) 57
BisI GCNGC 5 cut(s) 33, 42, 215, 300, 389
BlnI CCTAGG 1 cut(s) 694
BlsI GCNGC 5 cut(s) 34, 43, 216, 301, 390
BmcAI AGTACT 1 cut(s) 410
Bme1390I CCNGG 2 cut(s) 117, 295
BmiI GGNNCC 2 cut(s) 114, 557
BmrFI CCNGG 2 cut(s) 117, 295
BplI GAGNNNNNCTC 4 cut(s) 496, 528, 669, 701
Bpu14I TTCGAA 1 cut(s) 580
BpuEI CTTGAG 1 cut(s) 1007
BsaBI GATNNNNATC 1 cut(s) 134
BsaHI GRCGYC 1 cut(s) 981
BsaI GGTCTC 1 cut(s) 501
BsaJI CCNNGG 4 cut(s) 6, 116, 294, 694
BsaWI WCCGGW 1 cut(s) 335
Bsc4I CCNNNNNNNGG 2 cut(s) 526, 527
Bse118I RCCGGY 3 cut(s) 35, 335, 809
Bse1I ACTGG 1 cut(s) 487
Bse8I GATNNNNATC 1 cut(s) 134
BseBI CCWGG 2 cut(s) 117, 295
BseDI CCNNGG 4 cut(s) 6, 116, 294, 694
BseGI GGATG 3 cut(s) 181, 741, 848
BseJI GATNNNNATC 1 cut(s) 134
BseLI CCNNNNNNNGG 2 cut(s) 526, 527
BseMII CTCAG 2 cut(s) 909, 1016
BseNI ACTGG 1 cut(s) 487
BseX3I CGGCCG 1 cut(s) 774
BseXI GCAGC 3 cut(s) 53, 226, 286
BsgI GTGCAG 1 cut(s) 233
Bsh1285I CGRYCG 1 cut(s) 777
BshFI GGCC 4 cut(s) 5, 32, 314, 776
BshNI GGYRCC 1 cut(s) 112
BshTI ACCGGT 1 cut(s) 335
BsiEI CGRYCG 1 cut(s) 777
BsiHKAI GWGCWC 1 cut(s) 955
BsiSI CCGG 4 cut(s) 36, 336, 777, 810
BslFI GGGAC 1 cut(s) 253
BslI CCNNNNNNNGG 2 cut(s) 526, 527
BsmAI GTCTC 1 cut(s) 501
BsmFI GGGAC 1 cut(s) 253
BsnI GGCC 4 cut(s) 5, 32, 314, 776
Bso31I GGTCTC 1 cut(s) 501
Bsp119I TTCGAA 1 cut(s) 580
Bsp1286I GDGCHC 1 cut(s) 955
Bsp1407I TGTACA 1 cut(s) 658
Bsp143I GATC 2 cut(s) 129, 555
BspACI CCGC 3 cut(s) 33, 318, 388
BspANI GGCC 4 cut(s) 5, 32, 314, 776
BspCNI CTCAG 2 cut(s) 908, 1015
BspLI GGNNCC 2 cut(s) 114, 557
BspPI GGATC 2 cut(s) 550, 563
BspQI GCTCTTC 1 cut(s) 960
BspT104I TTCGAA 1 cut(s) 580
BspT107I GGYRCC 1 cut(s) 112
BspTNI GGTCTC 1 cut(s) 501
BsrFI RCCGGY 3 cut(s) 35, 335, 809
BsrGI TGTACA 1 cut(s) 658
BsrI ACTGG 1 cut(s) 487
BssAI RCCGGY 3 cut(s) 35, 335, 809
BssECI CCNNGG 4 cut(s) 6, 116, 294, 694
BssMI GATC 2 cut(s) 129, 555
BssNI GRCGYC 1 cut(s) 981
BssT1I CCWWGG 2 cut(s) 6, 694
Bst2UI CCWGG 2 cut(s) 117, 295
Bst4CI ACNGT 1 cut(s) 191
Bst6I CTCTTC 1 cut(s) 960
BstACI GRCGYC 1 cut(s) 981
BstAUI TGTACA 1 cut(s) 658
BstBI TTCGAA 1 cut(s) 580
BstC8I GCNNGC 1 cut(s) 37
BstDEI CTNAG 2 cut(s) 895, 1002
BstF5I GGATG 3 cut(s) 181, 741, 848
BstH2I RGCGCY 1 cut(s) 57
BstHHI GCGC 3 cut(s) 41, 56, 376
BstKTI GATC 2 cut(s) 132, 558
BstMAI GTCTC 1 cut(s) 501
BstMBI GATC 2 cut(s) 129, 555
BstMCI CGRYCG 1 cut(s) 777
BstMWI GCNNNNNNNGC 3 cut(s) 38, 41, 959
BstNI CCWGG 2 cut(s) 117, 295
BstSCI CCNGG 2 cut(s) 115, 293
BstSFI CTRYAG 2 cut(s) 207, 631
BstV1I GCAGC 3 cut(s) 53, 226, 286
BstX2I RGATCY 1 cut(s) 555
BstYI RGATCY 1 cut(s) 555
BstZI CGGCCG 1 cut(s) 774
BsuRI GGCC 4 cut(s) 5, 32, 314, 776
BtsCI GGATG 3 cut(s) 181, 741, 848
BtsI GCAGTG 1 cut(s) 629
BtsIMutI CAGTG 2 cut(s) 629, 993
Cac8I GCNNGC 1 cut(s) 37
CaiI CAGNNNCTG 2 cut(s) 220, 267
CfoI GCGC 3 cut(s) 41, 56, 376
Cfr10I RCCGGY 3 cut(s) 35, 335, 809
Csp6I GTAC 4 cut(s) 409, 468, 648, 659
CspAI ACCGGT 1 cut(s) 335
CviAII CATG 3 cut(s) 28, 547, 881
CviQI GTAC 4 cut(s) 409, 468, 648, 659
DdeI CTNAG 2 cut(s) 895, 1002
DpnI GATC 2 cut(s) 131, 557
DpnII GATC 2 cut(s) 129, 555
EaeI YGGCCR 4 cut(s) 3, 30, 312, 774
EagI CGGCCG 1 cut(s) 774
Eam1104I CTCTTC 1 cut(s) 960
EarI CTCTTC 1 cut(s) 960
Ecl136II GAGCTC 1 cut(s) 953
EclXI CGGCCG 1 cut(s) 774
Eco130I CCWWGG 2 cut(s) 6, 694
Eco24I GRGCYC 1 cut(s) 955
Eco31I GGTCTC 1 cut(s) 501
Eco52I CGGCCG 1 cut(s) 774
Eco53kI GAGCTC 1 cut(s) 953
Eco57I CTGAAG 3 cut(s) 228, 425, 617
EcoICRI GAGCTC 1 cut(s) 953
EcoRII CCWGG 2 cut(s) 115, 293
EcoT14I CCWWGG 2 cut(s) 6, 694
EcoT22I ATGCAT 1 cut(s) 886
EcoT38I GRGCYC 1 cut(s) 955
ErhI CCWWGG 2 cut(s) 6, 694
FaeI CATG 3 cut(s) 31, 550, 884
FaqI GGGAC 1 cut(s) 253
FatI CATG 3 cut(s) 27, 546, 880
FblI GTMKAC 1 cut(s) 927
Fnu4HI GCNGC 5 cut(s) 33, 42, 215, 300, 389
FokI GGATG 3 cut(s) 188, 748, 855
FriOI GRGCYC 1 cut(s) 955
Fsp4HI GCNGC 5 cut(s) 33, 42, 215, 300, 389
FspBI CTAG 3 cut(s) 228, 695, 764
FspI TGCGCA 1 cut(s) 375
GlaI GCGC 3 cut(s) 40, 55, 375
GluI GCNGC 5 cut(s) 33, 42, 215, 300, 389
HaeII RGCGCY 1 cut(s) 57
HaeIII GGCC 4 cut(s) 5, 32, 314, 776
HapII CCGG 4 cut(s) 36, 336, 777, 810
HhaI GCGC 3 cut(s) 41, 56, 376
Hin1I GRCGYC 1 cut(s) 981
Hin1II CATG 3 cut(s) 31, 550, 884
Hin6I GCGC 3 cut(s) 39, 54, 374
HinP1I GCGC 3 cut(s) 39, 54, 374
HincII GTYRAC 1 cut(s) 928
HindII GTYRAC 1 cut(s) 928
HinfI GANTC 6 cut(s) 22, 135, 146, 345, 366, 998
HpaII CCGG 4 cut(s) 36, 336, 777, 810
HphI GGTGA 4 cut(s) 283, 325, 475, 476
Hpy166II GTNNAC 6 cut(s) 470, 492, 661, 701, 769, 928
Hpy188I TCNGA 4 cut(s) 134, 453, 950, 1005
Hpy188III TCNNGA 2 cut(s) 911, 1024
Hpy8I GTNNAC 6 cut(s) 470, 492, 661, 701, 769, 928
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 3 cut(s) 520, 718, 854
HpyCH4III ACNGT 1 cut(s) 191
HpyCH4IV ACGT 2 cut(s) 603, 981
HpyCH4V TGCA 4 cut(s) 214, 302, 851, 884
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 41, 959
HpyF3I CTNAG 2 cut(s) 895, 1002
HpySE526I ACGT 2 cut(s) 603, 981
Hsp92I GRCGYC 1 cut(s) 981
Hsp92II CATG 3 cut(s) 31, 550, 884
HspAI GCGC 3 cut(s) 39, 54, 374
KroI GCCGGC 1 cut(s) 35
KroNI GCCGGC 1 cut(s) 37
Kzo9I GATC 2 cut(s) 129, 555
LguI GCTCTTC 1 cut(s) 960
LmnI GCTCC 2 cut(s) 283, 677
Lsp1109I GCAGC 3 cut(s) 53, 226, 286
MaeI CTAG 3 cut(s) 228, 695, 764
MaeII ACGT 2 cut(s) 603, 981
MaeIII GTNAC 3 cut(s) 331, 346, 542
MalI GATC 2 cut(s) 131, 557
MboI GATC 2 cut(s) 129, 555
MboII GAAGA 4 cut(s) 139, 610, 632, 947
MfeI CAATTG 2 cut(s) 829, 963
MflI RGATCY 1 cut(s) 555
MhlI GDGCHC 1 cut(s) 955
MlsI TGGCCA 2 cut(s) 5, 314
MluCI AATT 2 cut(s) 829, 963
MluNI TGGCCA 2 cut(s) 5, 314
MlyI GAGTC 3 cut(s) 31, 354, 360
MmeI TCCRAC 1 cut(s) 533
MnlI CCTC 8 cut(s) 88, 266, 275, 522, 584, 601, 726, 1031
Mox20I TGGCCA 2 cut(s) 5, 314
Mph1103I ATGCAT 1 cut(s) 886
MreI CGCCGGCG 1 cut(s) 35
MroNI GCCGGC 1 cut(s) 35
MroXI GAANNNNTTC 1 cut(s) 530
MscI TGGCCA 2 cut(s) 5, 314
Msp20I TGGCCA 2 cut(s) 5, 314
MspA1I CMGCKG 1 cut(s) 44
MspI CCGG 4 cut(s) 36, 336, 777, 810
MspR9I CCNGG 2 cut(s) 117, 295
MunI CAATTG 2 cut(s) 829, 963
MvaI CCWGG 2 cut(s) 117, 295
MwoI GCNNNNNNNGC 3 cut(s) 38, 41, 959
NaeI GCCGGC 1 cut(s) 37
NdeII GATC 2 cut(s) 129, 555
NgoMIV GCCGGC 1 cut(s) 35
NlaIII CATG 3 cut(s) 31, 550, 884
NlaIV GGNNCC 2 cut(s) 114, 557
NmeAIII GCCGAG 1 cut(s) 752
NmuCI GTSAC 3 cut(s) 331, 346, 542
NsbI TGCGCA 1 cut(s) 375
NsiI ATGCAT 1 cut(s) 886
NspV TTCGAA 1 cut(s) 580
PciSI GCTCTTC 1 cut(s) 960
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PdiI GCCGGC 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 530
PfeI GAWTC 3 cut(s) 135, 146, 998
PflFI GACNNNGTC 1 cut(s) 906
PinAI ACCGGT 1 cut(s) 335
PkrI GCNGC 5 cut(s) 34, 43, 216, 301, 390
PleI GAGTC 3 cut(s) 30, 353, 360
PpsI GAGTC 3 cut(s) 30, 353, 360
Psp124BI GAGCTC 1 cut(s) 955
Psp1406I AACGTT 1 cut(s) 603
Psp6I CCWGG 2 cut(s) 115, 293
PspGI CCWGG 2 cut(s) 115, 293
PspN4I GGNNCC 2 cut(s) 114, 557
PstNI CAGNNNCTG 2 cut(s) 220, 267
PsuI RGATCY 1 cut(s) 555
PsyI GACNNNGTC 1 cut(s) 906
PvuII CAGCTG 1 cut(s) 44
RsaI GTAC 4 cut(s) 410, 469, 649, 660
RsaNI GTAC 4 cut(s) 409, 468, 648, 659
SacI GAGCTC 1 cut(s) 955
SalI GTCGAC 1 cut(s) 926
SapI GCTCTTC 1 cut(s) 960
SatI GCNGC 5 cut(s) 33, 42, 215, 300, 389
Sau3AI GATC 2 cut(s) 129, 555
ScaI AGTACT 1 cut(s) 410
SchI GAGTC 3 cut(s) 31, 354, 360
ScrFI CCNGG 2 cut(s) 117, 295
SduI GDGCHC 1 cut(s) 955
SfcI CTRYAG 2 cut(s) 207, 631
SfuI TTCGAA 1 cut(s) 580
SgrAI CRCCGGYG 2 cut(s) 35, 809
SmlI CTYRAG 1 cut(s) 1022
SmoI CTYRAG 1 cut(s) 1022
Sse9I AATT 2 cut(s) 829, 963
SsiI CCGC 3 cut(s) 33, 318, 388
SspI AATATT 1 cut(s) 1031
SspMI CTAG 3 cut(s) 228, 695, 764
SstI GAGCTC 1 cut(s) 955
StyD4I CCNGG 2 cut(s) 115, 293
StyI CCWWGG 2 cut(s) 6, 694
TaaI ACNGT 1 cut(s) 191
TaiI ACGT 2 cut(s) 606, 984
TaqI TCGA 4 cut(s) 405, 580, 901, 927
TasI AATT 2 cut(s) 829, 963
TatI WGTACW 3 cut(s) 408, 467, 658
TauI GCSGC 2 cut(s) 35, 391
TfiI GAWTC 3 cut(s) 135, 146, 998
TscAI CASTG 2 cut(s) 629, 1000
TseFI GTSAC 3 cut(s) 331, 346, 542
TseI GCWGC 3 cut(s) 41, 214, 299
Tsp45I GTSAC 3 cut(s) 331, 346, 542
TspDTI ATGAA 3 cut(s) 275, 629, 632
TspGWI ACGGA 1 cut(s) 270
TspRI CASTG 2 cut(s) 629, 1000
Tth111I GACNNNGTC 1 cut(s) 906
XmaJI CCTAGG 1 cut(s) 694
XmiI GTMKAC 1 cut(s) 927
XmnI GAANNNNTTC 1 cut(s) 530
XspI CTAG 3 cut(s) 228, 695, 764
ZraI GACGTC 1 cut(s) 982
ZrmI AGTACT 1 cut(s) 410
Zsp2I ATGCAT 1 cut(s) 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.