Rorug02G0466300

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
59794017 .. 59796195
2179 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0466300.1

Sequence Viewer

Length: 1974 bp
ATGGCTGATGTTGAAAGTGTTGAGAATCTCCGAGCTGCACAAAAAATCTTGAGGGCTAGTCTAGAGAAATCTACTGCTATTTCTTCAAAGCTAGATGAAATCGGGCCTAGATTGGAAGATATTAGGCAGAGATTGCCATCTTTGGAAGCTGCAATTAGACCTTCCTCCATGCAAAAATGTAGTTACTTTGCAATCAGGGACCAAATCAATGGTGCCATTGGCCCTGCTGCTGCTGTTCTCAAAGTCTACGACGTCGTCCGTGAGCTCGAGGAGTCACTACTCTATGAGTCGTGTGATGATCTTTCTGCTTATCTTTCATCGATGAAAATGCTCGAAGAAGCTTTGGGATTTCTTGCTGACAATTGTGAGCTGGCCATTCAGTGGCTGGAGGACATTGTTGAGTTTTTGGAAGATAATGTTTTTTCCAATGATCAAAGCCTTTTGAATGTGAAGAAATCTCTGAGGATCTTACAGGAGTTGCATGAAATCGAGGAGCGTGCTCATCTTGATGGAGGAGCTCTCAATGCTGCAATCAACAATCTTGAGACTGAATTCAGGAGTCTATTGATGGAGAATAGTGTTACAACAACAACCTGTGCTACTTTATTACCATTAACTATGCCTGTAGTCCAAAAGCTTCAAGCCATAGCTGGGAGATTGGATGGTGATTATCGGCTTGAAAAGTGCATAGTCTTGTACATTGAAGTTCGGAGTTTGAATGCGGTAAGAAGCTTGCAGGCTCTTGATCTGGACTACCTTGAGATACAAGTCACCGAATTTGATGACATCCAGAGCATTGAGTCTCATATTGATCAATGGTGCAAGCATTTGGAGTTGGTTGTGAAGGACCTAATCGAGCTGGAGTACAAACTCTGCAACGATGTCTTTGAGAAGATAGGATCAGATGCTTGGAAGCACTGTGTTGCAAGACTGGCTGAGGAGTTTAGACTAATTTATTTCCTTCAGTTTGGAAGGAATGTCACCAAGATGAAGAAGAACCCTCTCAAGCTCTTGAAGCTATTAGATATGTTTGCACTTATGGAAAGTCTAAGATCAAATTTTAACCGCCTTTTTGGTGGAGAAGCCTGCACTGACATTCGGACCCTGACAAGGGAACTAGTGAAGACAGTAGTGAATGGTGCTTATGAGATTTTCCAGGAACTTCCTTGTCAAGTGGAGATGCAGCGGCGATTTTCTCCTCCCCCAGACGGTGGCATTCCCGGGTTAGTAAGCTTTATAACTAATTACTGTGACCAATTACTAGGGGATGACTATAGGCCACTATTGGCCCAGGTCTTGAAGATCCATCAAAGCTGGAATCAAGATGTGTATGGAGATGGTTTCCTTACCAACCACATTATTATTATAATGAAGGAAGTTGCGCTAAATCTGGATGCATGGTCCAAGGCATATGAAGATATCTGCCTCTCCTACCTTTTTATGATGAACAATCATTGCCATTTCTGTCAGCTAAAAGGCACAAAGCTCGGCGATATAATGGGAGATTCTTGGTTAGGAGCTCATGAGCAATACAAGGACAATTGTGCAGCTCTCTACTTGAGACAATGCTGGGGAAAGCTTCTGCCTCTTATAAGTCAAAAGGATTTAAATTCATTTCAGGAGTCTGAAAAGAAGACGCTGAAGGAATTCAATGAGCGTTTTGATGAATTGTACAAGGAGCAGTCCAATTGGGTCATATGTGACGAAAACTTGAGGAGAAAAGTATGCCAGATTTTGGTGCAGGCGGTTGTACCAGCTTATAGGAGCTACATGCAAAAGTATGGGGTTTTGGTTGAACAAGATGCAAGTGCTAGTAAATATGTGAAGCACACAGCACAAAGCTTGGAGACTATGCTTAGTTCTATGTTTCAGCCTACACTGGTCAAGAAGTATTGCAGCACCAAACATATACGCTTTGGTAAGCTGAGAAACCTGGTGCAAAATCAATTTCGTGTAACTCTTACAGCTATGTGA

Protein Analysis

657

Amino Acids

75.32

Weight (kDa)

5.37

Isoelectric Point (pI)

42.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 73 - 189 2.4e-10 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 272 - 621 4e-88 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1238, 1367, 1592
AatII GACGTC 1 cut(s) 255
AccB1I GGYRCC 1 cut(s) 212
AccB7I CCANNNNNTGG 3 cut(s) 381, 1211, 1735
AccI GTMKAC 1 cut(s) 246
AciI CCGC 4 cut(s) 722, 1066, 1186, 1745
AclWI GGATC 3 cut(s) 473, 907, 1297
AcoI YGGCCR 1 cut(s) 372
AcsI RAATTY 5 cut(s) 551, 776, 1057, 1609, 1646
AcuI CTGAAG 2 cut(s) 947, 1661
AcyI GRCGYC 1 cut(s) 252
AfaI GTAC 4 cut(s) 698, 866, 1673, 1752
AfiI CCNNNNNNNGG 7 cut(s) 381, 651, 1110, 1111, 1208, 1211, 1735
AhlI ACTAGT 1 cut(s) 1117
AjnI CCWGG 3 cut(s) 1155, 1290, 1932
Alw21I GWGCWC 4 cut(s) 267, 502, 520, 1522
Alw26I GTCTC 4 cut(s) 539, 807, 1555, 1841
AlwI GGATC 3 cut(s) 473, 907, 1297
AlwNI CAGNNNCTG 1 cut(s) 385
Ama87I CYCGRG 2 cut(s) 266, 1220
AoxI GGCC 5 cut(s) 104, 220, 372, 1277, 1287
ApeKI GCWGC 8 cut(s) 35, 149, 227, 230, 527, 1183, 1547, 1896
ApoI RAATTY 5 cut(s) 551, 776, 1057, 1609, 1646
Asp700I GAANNNNTTC 1 cut(s) 1646
AspLEI GCGC 1 cut(s) 1384
AspS9I GGNCC 7 cut(s) 104, 199, 221, 847, 1101, 1288, 1401
AsuC2I CCSGG 2 cut(s) 1221, 1222
AsuHPI GGTGA 3 cut(s) 677, 763, 973
AvaI CYCGRG 2 cut(s) 266, 1220
AvaII GGWCC 4 cut(s) 199, 847, 1101, 1401
BalI TGGCCA 1 cut(s) 374
BanI GGYRCC 1 cut(s) 212
BanII GRGCYC 3 cut(s) 267, 520, 1522
BbsI GAAGAC 2 cut(s) 1130, 1640
Bbv12I GWGCWC 4 cut(s) 267, 502, 520, 1522
BbvCI CCTCAGC 1 cut(s) 936
BbvI GCAGC 8 cut(s) 22, 136, 214, 217, 514, 1195, 1559, 1908
BccI CCATC 6 cut(s) 145, 503, 562, 656, 1314, 1331
BcgI CGANNNNNNTGC 6 cut(s) 310, 344, 479, 513, 1468, 1502
BciT130I CCWGG 3 cut(s) 1157, 1292, 1934
BclI TGATCA 2 cut(s) 430, 811
BcnI CCSGG 2 cut(s) 1221, 1222
BcoDI GTCTC 4 cut(s) 539, 807, 1555, 1841
BcuI ACTAGT 1 cut(s) 1117
BfaI CTAG 7 cut(s) 57, 62, 92, 108, 1118, 1262, 1812
BfmI CTRYAG 2 cut(s) 624, 1273
BisI GCNGC 9 cut(s) 36, 150, 228, 231, 528, 1184, 1187, 1548, 1897
BlsI GCNGC 9 cut(s) 37, 151, 229, 232, 529, 1185, 1188, 1549, 1898
Bme1390I CCNGG 5 cut(s) 1157, 1221, 1222, 1292, 1934
Bme18I GGWCC 4 cut(s) 199, 847, 1101, 1401
BmeT110I CYCGRG 2 cut(s) 266, 1220
BmgT120I GGNCC 7 cut(s) 104, 199, 221, 847, 1101, 1288, 1401
BmiI GGNNCC 3 cut(s) 200, 214, 1103
BmrFI CCNGG 5 cut(s) 1157, 1221, 1222, 1292, 1934
BmsI GCATC 4 cut(s) 895, 1170, 1384, 1792
BpiI GAAGAC 2 cut(s) 1130, 1640
BplI GAGNNNNNCTC 2 cut(s) 504, 536
BpmI CTGGAG 2 cut(s) 407, 881
Bpu10I CCTNAGC 1 cut(s) 936
BpuEI CTTGAG 6 cut(s) 70, 563, 779, 989, 1579, 1732
BpuMI CCSGG 2 cut(s) 1221, 1222
Bsa29I ATCGAT 1 cut(s) 320
BsaBI GATNNNNATC 1 cut(s) 136
BsaHI GRCGYC 1 cut(s) 252
BsaJI CCNNGG 3 cut(s) 1220, 1290, 1404
Bsc4I CCNNNNNNNGG 7 cut(s) 381, 651, 1110, 1111, 1208, 1211, 1735
Bse1I ACTGG 2 cut(s) 936, 1884
Bse3DI GCAATG 1 cut(s) 1453
Bse8I GATNNNNATC 1 cut(s) 136
BseBI CCWGG 3 cut(s) 1157, 1292, 1934
BseCI ATCGAT 1 cut(s) 320
BseDI CCNNGG 3 cut(s) 1220, 1290, 1404
BseGI GGATG 4 cut(s) 667, 786, 1273, 1399
BseJI GATNNNNATC 1 cut(s) 136
BseLI CCNNNNNNNGG 7 cut(s) 381, 651, 1110, 1111, 1208, 1211, 1735
BseMI GCAATG 1 cut(s) 1453
BseMII CTCAG 3 cut(s) 452, 927, 1916
BseNI ACTGG 2 cut(s) 936, 1884
BseRI GAGGAG 6 cut(s) 284, 506, 528, 953, 1188, 1729
BseXI GCAGC 8 cut(s) 22, 136, 214, 217, 514, 1195, 1559, 1908
BseYI CCCAGC 2 cut(s) 650, 1569
BsgI GTGCAG 4 cut(s) 21, 1072, 1566, 1760
BshFI GGCC 5 cut(s) 106, 222, 374, 1279, 1289
BshNI GGYRCC 1 cut(s) 212
BshVI ATCGAT 1 cut(s) 320
BsiHKAI GWGCWC 4 cut(s) 267, 502, 520, 1522
BsiHKCI CYCGRG 2 cut(s) 266, 1220
BsiSI CCGG 1 cut(s) 1221
BslFI GGGAC 1 cut(s) 212
BslI CCNNNNNNNGG 7 cut(s) 381, 651, 1110, 1111, 1208, 1211, 1735
BsmAI GTCTC 4 cut(s) 539, 807, 1555, 1841
BsmFI GGGAC 1 cut(s) 212
BsmI GAATGC 2 cut(s) 724, 1215
BsnI GGCC 5 cut(s) 106, 222, 374, 1279, 1289
BsoBI CYCGRG 2 cut(s) 266, 1220
Bsp1286I GDGCHC 4 cut(s) 267, 502, 520, 1522
Bsp1407I TGTACA 2 cut(s) 696, 1671
Bsp143I GATC 8 cut(s) 298, 430, 465, 745, 811, 899, 1052, 1302
BspACI CCGC 4 cut(s) 722, 1066, 1186, 1745
BspANI GGCC 5 cut(s) 106, 222, 374, 1279, 1289
BspCNI CTCAG 3 cut(s) 453, 928, 1917
BspDI ATCGAT 1 cut(s) 320
BspHI TCATGA 1 cut(s) 1522
BspLI GGNNCC 3 cut(s) 200, 214, 1103
BspPI GGATC 3 cut(s) 473, 907, 1297
BspT107I GGYRCC 1 cut(s) 212
BsrDI GCAATG 1 cut(s) 1453
BsrGI TGTACA 2 cut(s) 696, 1671
BsrI ACTGG 2 cut(s) 936, 1884
BssECI CCNNGG 3 cut(s) 1220, 1290, 1404
BssMI GATC 8 cut(s) 298, 430, 465, 745, 811, 899, 1052, 1302
BssNI GRCGYC 1 cut(s) 252
BssT1I CCWWGG 1 cut(s) 1404
Bst2UI CCWGG 3 cut(s) 1157, 1292, 1934
Bst4CI ACNGT 4 cut(s) 920, 1129, 1211, 1250
BstACI GRCGYC 1 cut(s) 252
BstAPI GCANNNNNTGC 1 cut(s) 133
BstAUI TGTACA 2 cut(s) 696, 1671
BstC8I GCNNGC 7 cut(s) 372, 498, 734, 738, 824, 1087, 1743
BstDEI CTNAG 5 cut(s) 461, 936, 1049, 1856, 1925
BstF5I GGATG 4 cut(s) 667, 786, 1273, 1399
BstHHI GCGC 1 cut(s) 1384
BstKTI GATC 8 cut(s) 301, 433, 468, 748, 814, 902, 1055, 1305
BstMAI GTCTC 4 cut(s) 539, 807, 1555, 1841
BstMBI GATC 8 cut(s) 298, 430, 465, 745, 811, 899, 1052, 1302
BstMWI GCNNNNNNNGC 4 cut(s) 133, 524, 932, 1015
BstNI CCWGG 3 cut(s) 1157, 1292, 1934
BstNSI RCATGY 1 cut(s) 1774
BstSCI CCNGG 5 cut(s) 1155, 1219, 1220, 1290, 1932
BstSFI CTRYAG 2 cut(s) 624, 1273
BstV1I GCAGC 8 cut(s) 22, 136, 214, 217, 514, 1195, 1559, 1908
BstV2I GAAGAC 2 cut(s) 1130, 1640
BstX2I RGATCY 2 cut(s) 465, 1302
BstXI CCANNNNNNTGG 1 cut(s) 209
BstYI RGATCY 2 cut(s) 465, 1302
Bsu15I ATCGAT 1 cut(s) 320
BsuRI GGCC 5 cut(s) 106, 222, 374, 1279, 1289
BsuTUI ATCGAT 1 cut(s) 320
BtsCI GGATG 4 cut(s) 667, 786, 1273, 1399
BtsIMutI CAGTG 4 cut(s) 386, 916, 1089, 1877
Cac8I GCNNGC 7 cut(s) 372, 498, 734, 738, 824, 1087, 1743
CaiI CAGNNNCTG 1 cut(s) 385
CciI TCATGA 1 cut(s) 1522
CfoI GCGC 1 cut(s) 1384
Cfr13I GGNCC 7 cut(s) 104, 199, 221, 847, 1101, 1288, 1401
Cfr9I CCCGGG 1 cut(s) 1220
ClaI ATCGAT 1 cut(s) 320
CseI GACGC 1 cut(s) 1645
CsiI ACCWGGT 1 cut(s) 1932
Csp6I GTAC 4 cut(s) 697, 865, 1672, 1751
CviAII CATG 5 cut(s) 169, 482, 1398, 1523, 1771
CviQI GTAC 4 cut(s) 697, 865, 1672, 1751
DdeI CTNAG 5 cut(s) 461, 936, 1049, 1856, 1925
DpnI GATC 8 cut(s) 300, 432, 467, 747, 813, 901, 1054, 1304
DpnII GATC 8 cut(s) 298, 430, 465, 745, 811, 899, 1052, 1302
DraI TTTAAA 1 cut(s) 1608
EaeI YGGCCR 1 cut(s) 372
Ecl136II GAGCTC 3 cut(s) 265, 518, 1520
Eco130I CCWWGG 1 cut(s) 1404
Eco24I GRGCYC 3 cut(s) 267, 520, 1522
Eco32I GATATC 1 cut(s) 1420
Eco47I GGWCC 4 cut(s) 199, 847, 1101, 1401
Eco53kI GAGCTC 3 cut(s) 265, 518, 1520
Eco57I CTGAAG 2 cut(s) 947, 1661
Eco88I CYCGRG 2 cut(s) 266, 1220
EcoICRI GAGCTC 3 cut(s) 265, 518, 1520
EcoO109I RGGNCCY 1 cut(s) 847
EcoRI GAATTC 2 cut(s) 551, 1646
EcoRII CCWGG 3 cut(s) 1155, 1290, 1932
EcoRV GATATC 1 cut(s) 1420
EcoT14I CCWWGG 1 cut(s) 1404
EcoT22I ATGCAT 1 cut(s) 1399
EcoT38I GRGCYC 3 cut(s) 267, 520, 1522
ErhI CCWWGG 1 cut(s) 1404
FaeI CATG 5 cut(s) 172, 485, 1401, 1526, 1774
FaqI GGGAC 1 cut(s) 212
FatI CATG 5 cut(s) 168, 481, 1397, 1522, 1770
FauNDI CATATG 2 cut(s) 1411, 1697
FbaI TGATCA 2 cut(s) 430, 811
FblI GTMKAC 1 cut(s) 246
Fnu4HI GCNGC 9 cut(s) 36, 150, 228, 231, 528, 1184, 1187, 1548, 1897
FokI GGATG 4 cut(s) 674, 773, 1280, 1406
FriOI GRGCYC 3 cut(s) 267, 520, 1522
Fsp4HI GCNGC 9 cut(s) 36, 150, 228, 231, 528, 1184, 1187, 1548, 1897
FspBI CTAG 7 cut(s) 57, 62, 92, 108, 1118, 1262, 1812
GlaI GCGC 1 cut(s) 1383
GluI GCNGC 9 cut(s) 36, 150, 228, 231, 528, 1184, 1187, 1548, 1897
GsaI CCCAGC 2 cut(s) 654, 1573
GsuI CTGGAG 2 cut(s) 407, 881
HaeIII GGCC 5 cut(s) 106, 222, 374, 1279, 1289
HapII CCGG 1 cut(s) 1221
HgaI GACGC 1 cut(s) 1645
HhaI GCGC 1 cut(s) 1384
Hin1I GRCGYC 1 cut(s) 252
Hin1II CATG 5 cut(s) 172, 485, 1401, 1526, 1774
Hin6I GCGC 1 cut(s) 1382
HinP1I GCGC 1 cut(s) 1382
HindIII AAGCTT 6 cut(s) 339, 635, 730, 1231, 1577, 1840
HinfI GANTC 8 cut(s) 25, 272, 287, 559, 800, 1318, 1505, 1622
HpaII CCGG 1 cut(s) 1221
HphI GGTGA 3 cut(s) 677, 763, 973
Hpy166II GTNNAC 1 cut(s) 247
Hpy188I TCNGA 6 cut(s) 32, 462, 711, 904, 1101, 1627
Hpy8I GTNNAC 1 cut(s) 247
Hpy99I CGWCG 2 cut(s) 254, 257
HpyAV CCTTC 6 cut(s) 171, 838, 966, 971, 1366, 1636
HpyCH4III ACNGT 4 cut(s) 920, 1129, 1211, 1250
HpyCH4IV ACGT 1 cut(s) 252
HpyF10VI GCNNNNNNNGC 4 cut(s) 133, 524, 932, 1015
HpyF3I CTNAG 5 cut(s) 461, 936, 1049, 1856, 1925
HpySE526I ACGT 1 cut(s) 252
Hsp92I GRCGYC 1 cut(s) 252
Hsp92II CATG 5 cut(s) 172, 485, 1401, 1526, 1774
HspAI GCGC 1 cut(s) 1382
Ksp22I TGATCA 2 cut(s) 430, 811
Kzo9I GATC 8 cut(s) 298, 430, 465, 745, 811, 899, 1052, 1302
LmnI GCTCC 5 cut(s) 493, 515, 1517, 1678, 1764
Lsp1109I GCAGC 8 cut(s) 22, 136, 214, 217, 514, 1195, 1559, 1908
LweI GCATC 4 cut(s) 895, 1170, 1384, 1792
MabI ACCWGGT 1 cut(s) 1932
MaeI CTAG 7 cut(s) 57, 62, 92, 108, 1118, 1262, 1812
MaeII ACGT 1 cut(s) 252
MaeIII GTNAC 8 cut(s) 182, 273, 580, 769, 979, 1250, 1700, 1954
MalI GATC 8 cut(s) 300, 432, 467, 747, 813, 901, 1054, 1304
MboI GATC 8 cut(s) 298, 430, 465, 745, 811, 899, 1052, 1302
MfeI CAATTG 3 cut(s) 361, 1540, 1687
MflI RGATCY 2 cut(s) 465, 1302
MhlI GDGCHC 4 cut(s) 267, 502, 520, 1522
MlsI TGGCCA 1 cut(s) 374
MluNI TGGCCA 1 cut(s) 374
MlyI GAGTC 5 cut(s) 281, 296, 568, 809, 1631
Mox20I TGGCCA 1 cut(s) 374
Mph1103I ATGCAT 1 cut(s) 1399
MroXI GAANNNNTTC 1 cut(s) 1646
MscI TGGCCA 1 cut(s) 374
MseI TTAA 3 cut(s) 614, 1062, 1607
MslI CAYNNNNRTG 2 cut(s) 507, 986
Msp20I TGGCCA 1 cut(s) 374
MspA1I CMGCKG 1 cut(s) 1186
MspI CCGG 1 cut(s) 1221
MspR9I CCNGG 5 cut(s) 1157, 1221, 1222, 1292, 1934
MunI CAATTG 3 cut(s) 361, 1540, 1687
Mva1269I GAATGC 2 cut(s) 724, 1215
MvaI CCWGG 3 cut(s) 1157, 1292, 1934
MwoI GCNNNNNNNGC 4 cut(s) 133, 524, 932, 1015
NciI CCSGG 2 cut(s) 1221, 1222
NdeI CATATG 2 cut(s) 1411, 1697
NdeII GATC 8 cut(s) 298, 430, 465, 745, 811, 899, 1052, 1302
NlaIII CATG 5 cut(s) 172, 485, 1401, 1526, 1774
NlaIV GGNNCC 3 cut(s) 200, 214, 1103
NmeAIII GCCGAG 1 cut(s) 1467
NmuCI GTSAC 5 cut(s) 273, 769, 979, 1250, 1700
NsiI ATGCAT 1 cut(s) 1399
NspI RCATGY 1 cut(s) 1774
PaeR7I CTCGAG 1 cut(s) 266
PagI TCATGA 1 cut(s) 1522
PctI GAATGC 2 cut(s) 724, 1215
PdmI GAANNNNTTC 1 cut(s) 1646
PfeI GAWTC 3 cut(s) 25, 1318, 1505
PflFI GACNNNGTC 1 cut(s) 254
PflMI CCANNNNNTGG 3 cut(s) 381, 1211, 1735
PfoI TCCNGGA 1 cut(s) 1155
PkrI GCNGC 9 cut(s) 37, 151, 229, 232, 529, 1185, 1188, 1549, 1898
PleI GAGTC 5 cut(s) 280, 295, 567, 808, 1630
PpsI GAGTC 5 cut(s) 280, 295, 567, 808, 1630
PpuMI RGGWCCY 1 cut(s) 847
PsiI TTATAA 3 cut(s) 1238, 1367, 1592
Psp124BI GAGCTC 3 cut(s) 267, 520, 1522
Psp5II RGGWCCY 1 cut(s) 847
Psp6I CCWGG 3 cut(s) 1155, 1290, 1932
PspFI CCCAGC 2 cut(s) 650, 1569
PspGI CCWGG 3 cut(s) 1155, 1290, 1932
PspN4I GGNNCC 3 cut(s) 200, 214, 1103
PspPI GGNCC 7 cut(s) 104, 199, 221, 847, 1101, 1288, 1401
PspPPI RGGWCCY 1 cut(s) 847
PspXI VCTCGAGB 1 cut(s) 266
PstNI CAGNNNCTG 1 cut(s) 385
PsuI RGATCY 2 cut(s) 465, 1302
PsyI GACNNNGTC 1 cut(s) 254
RsaI GTAC 4 cut(s) 698, 866, 1673, 1752
RsaNI GTAC 4 cut(s) 697, 865, 1672, 1751
RseI CAYNNNNRTG 2 cut(s) 507, 986
SacI GAGCTC 3 cut(s) 267, 520, 1522
SaqAI TTAA 3 cut(s) 614, 1062, 1607
SatI GCNGC 9 cut(s) 36, 150, 228, 231, 528, 1184, 1187, 1548, 1897
Sau3AI GATC 8 cut(s) 298, 430, 465, 745, 811, 899, 1052, 1302
Sau96I GGNCC 7 cut(s) 104, 199, 221, 847, 1101, 1288, 1401
SchI GAGTC 5 cut(s) 281, 296, 568, 809, 1631
ScrFI CCNGG 5 cut(s) 1157, 1221, 1222, 1292, 1934
SduI GDGCHC 4 cut(s) 267, 502, 520, 1522
SexAI ACCWGGT 1 cut(s) 1932
SfaNI GCATC 4 cut(s) 895, 1170, 1384, 1792
SfcI CTRYAG 2 cut(s) 624, 1273
Sfr274I CTCGAG 1 cut(s) 266
SinI GGWCC 4 cut(s) 199, 847, 1101, 1401
SlaI CTCGAG 1 cut(s) 266
SmaI CCCGGG 1 cut(s) 1222
SmiI ATTTAAAT 1 cut(s) 1608
SmiMI CAYNNNNRTG 2 cut(s) 507, 986
SmlI CTYRAG 7 cut(s) 49, 266, 542, 758, 1004, 1558, 1711
SmoI CTYRAG 7 cut(s) 49, 266, 542, 758, 1004, 1558, 1711
SpeI ACTAGT 1 cut(s) 1117
SsiI CCGC 4 cut(s) 722, 1066, 1186, 1745
SspMI CTAG 7 cut(s) 57, 62, 92, 108, 1118, 1262, 1812
SstI GAGCTC 3 cut(s) 267, 520, 1522
StyD4I CCNGG 5 cut(s) 1155, 1219, 1220, 1290, 1932
StyI CCWWGG 1 cut(s) 1404
SwaI ATTTAAAT 1 cut(s) 1608
TaaI ACNGT 4 cut(s) 920, 1129, 1211, 1250
TaiI ACGT 1 cut(s) 255
TaqI TCGA 5 cut(s) 267, 320, 333, 489, 855
TatI WGTACW 3 cut(s) 696, 864, 1671
TauI GCSGC 1 cut(s) 1189
TfiI GAWTC 3 cut(s) 25, 1318, 1505
Tru1I TTAA 3 cut(s) 614, 1062, 1607
Tru9I TTAA 3 cut(s) 614, 1062, 1607
TscAI CASTG 4 cut(s) 386, 923, 1096, 1884
TseFI GTSAC 5 cut(s) 273, 769, 979, 1250, 1700
TseI GCWGC 8 cut(s) 35, 149, 227, 230, 527, 1183, 1547, 1896
Tsp45I GTSAC 5 cut(s) 273, 769, 979, 1250, 1700
TspGWI ACGGA 1 cut(s) 248
TspMI CCCGGG 1 cut(s) 1220
TspRI CASTG 4 cut(s) 386, 923, 1096, 1884
Tth111I GACNNNGTC 1 cut(s) 254
Van91I CCANNNNNTGG 3 cut(s) 381, 1211, 1735
VpaK11BI GGWCC 4 cut(s) 199, 847, 1101, 1401
XapI RAATTY 5 cut(s) 551, 776, 1057, 1609, 1646
XbaI TCTAGA 1 cut(s) 61
XceI RCATGY 1 cut(s) 1774
XcmI CCANNNNNNNNNTGG 1 cut(s) 382
XhoI CTCGAG 1 cut(s) 266
XmaI CCCGGG 1 cut(s) 1220
XmiI GTMKAC 1 cut(s) 246
XmnI GAANNNNTTC 1 cut(s) 1646
XspI CTAG 7 cut(s) 57, 62, 92, 108, 1118, 1262, 1812
ZraI GACGTC 1 cut(s) 253
Zsp2I ATGCAT 1 cut(s) 1399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.