Rh2BG546500

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
75516664 .. 75546314
29651 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG546500.1

Sequence Viewer

Length: 1605 bp
ATGGGCGCCTCAAACACCGAGTTGTTCTTCCTGGCCATACATTGCCTTGCTCTTTTGGGGCCGTTTTATTTCAACTGGTCTGCGTTTTGGCTGGCTGTGGGACTCTATTTCGTTACAGGTGTGGGTATAACTCTGTCTTTCCATAGAAACCTCGCTCACCACAGCTTCAAGCTTCCCAGATGGCTCGAGTACTCTTTTGCCTACTGCGCCGTCCTTTCGCTCCCGGTTTGTGAAACTGCACCCAAGGACGTATATATCGATCGGAAAATTAATGGATGTCTTCCCAATAATGTGTCTGTTGAATTTCTGTATCCCGACGCTCTAGAATTCAAGAATGTCGGAGACTTAAAGAAGCAGTGGTACTATAGGTTTCTTCACTATACGTATCCTTGTCACTCTGTTGCTCTTGGAATTCTGCTATATGCTGGAGGAAGGCTACCATTCTTGGTTTGGGGAATGGATGTGAGGACTGTATTTTTTCTCCGCATTACCTTCTCAATAAACTCGATCTGCCACATATGGGGAAAGCAAGTATGGAATACTGGTGATTTGTCTAGAAACAACTGGTTGTTAGGTTTGCTAGCACATGGCGAAGGTTGGCACAATAATGATCATGCCTTTGAGTACTCAGCTCGACAAGGCTTGGAATGGTGGGAGATTGATACTACTTGGTATATAATAAGCTTCCTTGAAGCCATTGGTTTGGCTACAGACTTTTTGCTTTTAATTTATCTCTCTCACTTCAGGAGCATCACCATGGAAGAAAAAATGGACGCCTCAACAACCAAGTTTTTTTTCCTGGCCATACATTGCCTTGCTCTTTTGGGGCCGTTTTATTTCAACTGGTCTGCGTTTTGGCTGGCTGTGGCACTCTATTATGTTACAGGTGTGGGTATAACTCTGTCTTTCCATAGAAACCTCGCTCACCGCAGCTTCAAGCTTCCCAGATGGCTCGAGTACTCTTTTGCCTACTGCGCCGTCCTTTCGCTCCAGGGAAGTCCAATTGAATGGGTGAGCACACACAGAATCCATCATCAGTTTACAGACACATGGGATGATCCTCACAGTCCCATTAAGGGATTTTGGTACAGTCATATTGGTTGGGTTGTTGACTATCATTCTCGGTTTGGAACTCCTGACACACTAGAATTCAAAAATGTCGGAGACTTAAAGAAACAGTGGTACTATAGGTTTATTCACTGTACGTATCCTTATCACTCTGTAGCTCTTGGAATTCTGCTATATGCTGGAGGAGGGCTACCATTCTTGGTTTGGGGAATGGGTGTGAGGACTGCATTTTTTCTCCACATTACCTTTTCAATAAACTCGATCTGCCACATATGGGGAAAGCAAGTATGGAATACTGGTGATTTGTCTAGAAACAACTGGTTGTTAGGTTTGCTGGCACATGGCGAAGGTTGGCACAATAATCATCATGCCTTTGAGTACTCAGCTCGACAAGGCTTGGAATGGTGGGAGATTGACACTACTTGGTATATAATACGCTTCCTTGAAGCCATTGGTTTGGCTACAGACGTAAAACTCCCAAATGAAGCTCATAAGAAAAGAAAGGCATTCTGCAAGAATAGCAGTACTATCCAGTAA

Protein Analysis

534

Amino Acids

62.13

Weight (kDa)

7.69

Isoelectric Point (pI)

33.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_desaturase PF00487 281 - 502 3.2e-18 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 5
AciI CCGC 2 cut(s) 484, 928
AclWI GGATC 1 cut(s) 1052
AcoI YGGCCR 2 cut(s) 33, 801
AcsI RAATTY 5 cut(s) 302, 326, 411, 1148, 1233
AcuI CTGAAG 1 cut(s) 727
AcyI GRCGYC 2 cut(s) 6, 774
AfaI GTAC 9 cut(s) 191, 362, 626, 959, 1088, 1184, 1204, 1448, 1594
AfiI CCNNNNNNNGG 3 cut(s) 520, 1076, 1342
AjnI CCWGG 3 cut(s) 30, 798, 990
AjuI GAANNNNNNNTTGG 2 cut(s) 779, 811
AluBI AGCT 9 cut(s) 165, 172, 632, 684, 933, 940, 1226, 1454, 1556
AluI AGCT 9 cut(s) 165, 172, 632, 684, 933, 940, 1226, 1454, 1556
Alw21I GWGCWC 1 cut(s) 1019
Alw26I GTCTC 2 cut(s) 336, 1158
AlwI GGATC 1 cut(s) 1052
Ama87I CYCGRG 2 cut(s) 185, 953
AoxI GGCC 4 cut(s) 33, 59, 801, 827
ApeKI GCWGC 1 cut(s) 930
ApoI RAATTY 5 cut(s) 302, 326, 411, 1148, 1233
AseI ATTAAT 1 cut(s) 270
AspLEI GCGC 3 cut(s) 8, 209, 977
AspS9I GGNCC 2 cut(s) 59, 827
AsuC2I CCSGG 1 cut(s) 224
AsuHPI GGTGA 6 cut(s) 149, 557, 745, 917, 1024, 1379
AsuNHI GCTAGC 1 cut(s) 580
AvaI CYCGRG 2 cut(s) 185, 953
BalI TGGCCA 2 cut(s) 35, 803
BanI GGYRCC 1 cut(s) 5
BarI GAAGNNNNNNTAC 2 cut(s) 344, 376
BbsI GAAGAC 1 cut(s) 272
Bbv12I GWGCWC 1 cut(s) 1019
BbvI GCAGC 1 cut(s) 942
BccI CCATC 3 cut(s) 174, 942, 1038
BceAI ACGGC 4 cut(s) 46, 194, 814, 962
BciT130I CCWGG 3 cut(s) 32, 800, 992
BciVI GTATCC 3 cut(s) 321, 396, 1218
BclI TGATCA 1 cut(s) 610
BcnI CCSGG 1 cut(s) 224
BcoDI GTCTC 2 cut(s) 336, 1158
BfaI CTAG 5 cut(s) 323, 555, 581, 1145, 1377
BfmI CTRYAG 5 cut(s) 364, 708, 1186, 1221, 1530
BfoI RGCGCY 1 cut(s) 9
BfuI GTATCC 3 cut(s) 321, 396, 1218
BisI GCNGC 1 cut(s) 931
BlsI GCNGC 1 cut(s) 932
BmcAI AGTACT 5 cut(s) 191, 626, 959, 1448, 1594
Bme1390I CCNGG 4 cut(s) 32, 224, 800, 992
BmeT110I CYCGRG 2 cut(s) 185, 953
BmgT120I GGNCC 2 cut(s) 59, 827
BmiI GGNNCC 3 cut(s) 7, 60, 828
BmrFI CCNGG 4 cut(s) 32, 224, 800, 992
BmsI GCATC 1 cut(s) 759
BmtI GCTAGC 1 cut(s) 584
BpiI GAAGAC 1 cut(s) 272
BpmI CTGGAG 3 cut(s) 447, 974, 1269
BpuMI CCSGG 1 cut(s) 224
Bsa29I ATCGAT 1 cut(s) 258
BsaAI YACGTR 2 cut(s) 384, 1206
BsaHI GRCGYC 2 cut(s) 6, 774
BsaJI CCNNGG 3 cut(s) 243, 756, 991
Bsc4I CCNNNNNNNGG 3 cut(s) 520, 1076, 1342
Bse1I ACTGG 7 cut(s) 80, 547, 569, 848, 1369, 1391, 1600
Bse3DI GCAATG 2 cut(s) 40, 808
BseBI CCWGG 3 cut(s) 32, 800, 992
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 3 cut(s) 243, 756, 991
BseGI GGATG 3 cut(s) 281, 466, 1060
BseLI CCNNNNNNNGG 3 cut(s) 520, 1076, 1342
BseMI GCAATG 2 cut(s) 40, 808
BseMII CTCAG 2 cut(s) 642, 1464
BseNI ACTGG 7 cut(s) 80, 547, 569, 848, 1369, 1391, 1600
BseRI GAGGAG 1 cut(s) 1266
BseXI GCAGC 1 cut(s) 942
BsgI GTGCAG 1 cut(s) 222
Bsh1285I CGRYCG 1 cut(s) 262
BshFI GGCC 4 cut(s) 35, 61, 803, 829
BshNI GGYRCC 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 258
BsiEI CGRYCG 1 cut(s) 262
BsiHKAI GWGCWC 1 cut(s) 1019
BsiHKCI CYCGRG 2 cut(s) 185, 953
BsiSI CCGG 1 cut(s) 224
BslFI GGGAC 2 cut(s) 114, 1053
BslI CCNNNNNNNGG 3 cut(s) 520, 1076, 1342
BsmAI GTCTC 2 cut(s) 336, 1158
BsmFI GGGAC 2 cut(s) 114, 1053
BsmI GAATGC 1 cut(s) 1574
BsnI GGCC 4 cut(s) 35, 61, 803, 829
BsoBI CYCGRG 2 cut(s) 185, 953
Bsp1286I GDGCHC 1 cut(s) 1019
Bsp143I GATC 5 cut(s) 259, 507, 610, 1057, 1329
Bsp19I CCATGG 1 cut(s) 756
BspACI CCGC 2 cut(s) 484, 928
BspANI GGCC 4 cut(s) 35, 61, 803, 829
BspCNI CTCAG 2 cut(s) 641, 1463
BspDI ATCGAT 1 cut(s) 258
BspLI GGNNCC 3 cut(s) 7, 60, 828
BspOI GCTAGC 1 cut(s) 584
BspPI GGATC 1 cut(s) 1052
BspT107I GGYRCC 1 cut(s) 5
BsrDI GCAATG 2 cut(s) 40, 808
BsrI ACTGG 7 cut(s) 80, 547, 569, 848, 1369, 1391, 1600
BssECI CCNNGG 3 cut(s) 243, 756, 991
BssMI GATC 5 cut(s) 259, 507, 610, 1057, 1329
BssNI GRCGYC 2 cut(s) 6, 774
BssT1I CCWWGG 2 cut(s) 243, 756
Bst2UI CCWGG 3 cut(s) 32, 800, 992
Bst4CI ACNGT 5 cut(s) 472, 1067, 1091, 1179, 1202
BstACI GRCGYC 2 cut(s) 6, 774
BstBAI YACGTR 2 cut(s) 384, 1206
BstC8I GCNNGC 4 cut(s) 93, 582, 861, 1404
BstDEI CTNAG 2 cut(s) 628, 1450
BstDSI CCRYGG 1 cut(s) 756
BstF5I GGATG 3 cut(s) 281, 466, 1060
BstH2I RGCGCY 1 cut(s) 9
BstHHI GCGC 3 cut(s) 8, 209, 977
BstKTI GATC 5 cut(s) 262, 510, 613, 1060, 1332
BstMAI GTCTC 2 cut(s) 336, 1158
BstMBI GATC 5 cut(s) 259, 507, 610, 1057, 1329
BstMCI CGRYCG 1 cut(s) 262
BstMWI GCNNNNNNNGC 3 cut(s) 206, 974, 1587
BstNI CCWGG 3 cut(s) 32, 800, 992
BstSCI CCNGG 4 cut(s) 30, 222, 798, 990
BstSFI CTRYAG 5 cut(s) 364, 708, 1186, 1221, 1530
BstSNI TACGTA 2 cut(s) 384, 1206
BstV1I GCAGC 1 cut(s) 942
BstV2I GAAGAC 1 cut(s) 272
BstXI CCANNNNNNTGG 3 cut(s) 703, 1008, 1525
Bsu15I ATCGAT 1 cut(s) 258
BsuI GTATCC 3 cut(s) 321, 396, 1218
BsuRI GGCC 4 cut(s) 35, 61, 803, 829
BsuTUI ATCGAT 1 cut(s) 258
BtgI CCRYGG 1 cut(s) 756
BtsCI GGATG 3 cut(s) 281, 466, 1060
BtsI GCAGTG 1 cut(s) 362
BtsIMutI CAGTG 3 cut(s) 362, 1184, 1198
Cac8I GCNNGC 4 cut(s) 93, 582, 861, 1404
CfoI GCGC 3 cut(s) 8, 209, 977
Cfr13I GGNCC 2 cut(s) 59, 827
ClaI ATCGAT 1 cut(s) 258
CseI GACGC 2 cut(s) 326, 782
Csp6I GTAC 9 cut(s) 190, 361, 625, 958, 1087, 1183, 1203, 1447, 1593
CviAII CATG 6 cut(s) 587, 614, 757, 1050, 1409, 1436
CviQI GTAC 9 cut(s) 190, 361, 625, 958, 1087, 1183, 1203, 1447, 1593
DdeI CTNAG 2 cut(s) 628, 1450
DinI GGCGCC 1 cut(s) 7
DpnI GATC 5 cut(s) 261, 509, 612, 1059, 1331
DpnII GATC 5 cut(s) 259, 507, 610, 1057, 1329
EaeI YGGCCR 2 cut(s) 33, 801
Eco105I TACGTA 2 cut(s) 384, 1206
Eco130I CCWWGG 2 cut(s) 243, 756
Eco57I CTGAAG 1 cut(s) 727
Eco88I CYCGRG 2 cut(s) 185, 953
EcoRI GAATTC 4 cut(s) 326, 411, 1148, 1233
EcoRII CCWGG 3 cut(s) 30, 798, 990
EcoT14I CCWWGG 2 cut(s) 243, 756
EgeI GGCGCC 1 cut(s) 7
EheI GGCGCC 1 cut(s) 7
ErhI CCWWGG 2 cut(s) 243, 756
FaeI CATG 6 cut(s) 590, 617, 760, 1053, 1412, 1439
FaqI GGGAC 2 cut(s) 114, 1053
FatI CATG 6 cut(s) 586, 613, 756, 1049, 1408, 1435
FauNDI CATATG 2 cut(s) 518, 1340
FbaI TGATCA 1 cut(s) 610
Fnu4HI GCNGC 1 cut(s) 931
FokI GGATG 3 cut(s) 288, 473, 1067
Fsp4HI GCNGC 1 cut(s) 931
FspBI CTAG 5 cut(s) 323, 555, 581, 1145, 1377
GlaI GCGC 3 cut(s) 7, 208, 976
GluI GCNGC 1 cut(s) 931
GsuI CTGGAG 3 cut(s) 447, 974, 1269
HaeII RGCGCY 1 cut(s) 9
HaeIII GGCC 4 cut(s) 35, 61, 803, 829
HapII CCGG 1 cut(s) 224
HgaI GACGC 2 cut(s) 326, 782
HhaI GCGC 3 cut(s) 8, 209, 977
Hin1I GRCGYC 2 cut(s) 6, 774
Hin1II CATG 6 cut(s) 590, 617, 760, 1053, 1412, 1439
Hin6I GCGC 3 cut(s) 6, 207, 975
HinP1I GCGC 3 cut(s) 6, 207, 975
HincII GTYRAC 1 cut(s) 1111
HindII GTYRAC 1 cut(s) 1111
HindIII AAGCTT 3 cut(s) 170, 682, 938
HinfI GANTC 2 cut(s) 102, 1026
HpaII CCGG 1 cut(s) 224
HphI GGTGA 6 cut(s) 149, 557, 745, 917, 1024, 1379
Hpy166II GTNNAC 2 cut(s) 1041, 1111
Hpy188I TCNGA 3 cut(s) 264, 341, 1163
Hpy188III TCNNGA 7 cut(s) 314, 323, 331, 555, 745, 1136, 1377
Hpy8I GTNNAC 2 cut(s) 1041, 1111
Hpy99I CGWCG 1 cut(s) 320
HpyAV CCTTC 4 cut(s) 426, 502, 587, 1409
HpyCH4III ACNGT 5 cut(s) 472, 1067, 1091, 1179, 1202
HpyCH4IV ACGT 4 cut(s) 249, 383, 1205, 1536
HpyCH4V TGCA 3 cut(s) 239, 1295, 1581
HpyF10VI GCNNNNNNNGC 3 cut(s) 206, 974, 1587
HpyF3I CTNAG 2 cut(s) 628, 1450
HpySE526I ACGT 4 cut(s) 249, 383, 1205, 1536
Hsp92I GRCGYC 2 cut(s) 6, 774
Hsp92II CATG 6 cut(s) 590, 617, 760, 1053, 1412, 1439
HspAI GCGC 3 cut(s) 6, 207, 975
KasI GGCGCC 1 cut(s) 5
Ksp22I TGATCA 1 cut(s) 610
Kzo9I GATC 5 cut(s) 259, 507, 610, 1057, 1329
LmnI GCTCC 3 cut(s) 225, 747, 993
Lsp1109I GCAGC 1 cut(s) 942
LweI GCATC 1 cut(s) 759
MaeI CTAG 5 cut(s) 323, 555, 581, 1145, 1377
MaeII ACGT 4 cut(s) 249, 383, 1205, 1536
MaeIII GTNAC 3 cut(s) 112, 392, 880
MalI GATC 5 cut(s) 261, 509, 612, 1059, 1331
MboI GATC 5 cut(s) 259, 507, 610, 1057, 1329
MboII GAAGA 4 cut(s) 19, 272, 365, 773
MfeI CAATTG 1 cut(s) 1002
MhlI GDGCHC 1 cut(s) 1019
MlsI TGGCCA 2 cut(s) 35, 803
MluCI AATT 8 cut(s) 267, 302, 326, 411, 726, 1002, 1148, 1233
MluNI TGGCCA 2 cut(s) 35, 803
Mly113I GGCGCC 1 cut(s) 6
MlyI GAGTC 1 cut(s) 96
MmeI TCCRAC 2 cut(s) 319, 1141
Mox20I TGGCCA 2 cut(s) 35, 803
MscI TGGCCA 2 cut(s) 35, 803
MseI TTAA 5 cut(s) 270, 347, 725, 1074, 1169
MslI CAYNNNNRTG 2 cut(s) 606, 755
Msp20I TGGCCA 2 cut(s) 35, 803
MspI CCGG 1 cut(s) 224
MspR9I CCNGG 4 cut(s) 32, 224, 800, 992
MunI CAATTG 1 cut(s) 1002
Mva1269I GAATGC 1 cut(s) 1574
MvaI CCWGG 3 cut(s) 32, 800, 992
MwoI GCNNNNNNNGC 3 cut(s) 206, 974, 1587
NarI GGCGCC 1 cut(s) 6
NciI CCSGG 1 cut(s) 224
NcoI CCATGG 1 cut(s) 756
NdeI CATATG 2 cut(s) 518, 1340
NdeII GATC 5 cut(s) 259, 507, 610, 1057, 1329
NheI GCTAGC 1 cut(s) 580
NlaIII CATG 6 cut(s) 590, 617, 760, 1053, 1412, 1439
NlaIV GGNNCC 3 cut(s) 7, 60, 828
NmuCI GTSAC 1 cut(s) 392
PaeR7I CTCGAG 2 cut(s) 185, 953
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 1574
PfeI GAWTC 1 cut(s) 1026
PkrI GCNGC 1 cut(s) 932
Ple19I CGATCG 1 cut(s) 262
PleI GAGTC 1 cut(s) 96
PluTI GGCGCC 1 cut(s) 9
PpsI GAGTC 1 cut(s) 96
Ppu21I YACGTR 2 cut(s) 384, 1206
PshBI ATTAAT 1 cut(s) 270
Psp6I CCWGG 3 cut(s) 30, 798, 990
PspGI CCWGG 3 cut(s) 30, 798, 990
PspN4I GGNNCC 3 cut(s) 7, 60, 828
PspPI GGNCC 2 cut(s) 59, 827
PspXI VCTCGAGB 2 cut(s) 185, 953
PvuI CGATCG 1 cut(s) 262
RsaI GTAC 9 cut(s) 191, 362, 626, 959, 1088, 1184, 1204, 1448, 1594
RsaNI GTAC 9 cut(s) 190, 361, 625, 958, 1087, 1183, 1203, 1447, 1593
RseI CAYNNNNRTG 2 cut(s) 606, 755
SaqAI TTAA 5 cut(s) 270, 347, 725, 1074, 1169
SatI GCNGC 1 cut(s) 931
Sau3AI GATC 5 cut(s) 259, 507, 610, 1057, 1329
Sau96I GGNCC 2 cut(s) 59, 827
ScaI AGTACT 5 cut(s) 191, 626, 959, 1448, 1594
SchI GAGTC 1 cut(s) 96
ScrFI CCNGG 4 cut(s) 32, 224, 800, 992
SduI GDGCHC 1 cut(s) 1019
SfaNI GCATC 1 cut(s) 759
SfcI CTRYAG 5 cut(s) 364, 708, 1186, 1221, 1530
SfoI GGCGCC 1 cut(s) 7
Sfr274I CTCGAG 2 cut(s) 185, 953
SlaI CTCGAG 2 cut(s) 185, 953
SmiMI CAYNNNNRTG 2 cut(s) 606, 755
SmlI CTYRAG 2 cut(s) 185, 953
SmoI CTYRAG 2 cut(s) 185, 953
SnaBI TACGTA 2 cut(s) 384, 1206
Sse9I AATT 8 cut(s) 267, 302, 326, 411, 726, 1002, 1148, 1233
SsiI CCGC 2 cut(s) 484, 928
SspDI GGCGCC 1 cut(s) 5
SspMI CTAG 5 cut(s) 323, 555, 581, 1145, 1377
StyD4I CCNGG 4 cut(s) 30, 222, 798, 990
StyI CCWWGG 2 cut(s) 243, 756
TaaI ACNGT 5 cut(s) 472, 1067, 1091, 1179, 1202
TaiI ACGT 4 cut(s) 252, 386, 1208, 1539
TaqI TCGA 7 cut(s) 186, 258, 506, 634, 954, 1328, 1456
TasI AATT 8 cut(s) 267, 302, 326, 411, 726, 1002, 1148, 1233
TatI WGTACW 5 cut(s) 189, 624, 957, 1446, 1592
TfiI GAWTC 1 cut(s) 1026
Tru1I TTAA 5 cut(s) 270, 347, 725, 1074, 1169
Tru9I TTAA 5 cut(s) 270, 347, 725, 1074, 1169
TscAI CASTG 3 cut(s) 362, 1184, 1205
TseFI GTSAC 1 cut(s) 392
TseI GCWGC 1 cut(s) 930
Tsp45I GTSAC 1 cut(s) 392
TspDTI ATGAA 1 cut(s) 1566
TspRI CASTG 3 cut(s) 362, 1184, 1205
VspI ATTAAT 1 cut(s) 270
XapI RAATTY 5 cut(s) 302, 326, 411, 1148, 1233
XbaI TCTAGA 3 cut(s) 322, 554, 1376
XcmI CCANNNNNNNNNTGG 2 cut(s) 447, 1269
XhoI CTCGAG 2 cut(s) 185, 953
XspI CTAG 5 cut(s) 323, 555, 581, 1145, 1377
ZrmI AGTACT 5 cut(s) 191, 626, 959, 1448, 1594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.