FvH4_3g28040

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
21051337 .. 21053314
1978 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g28040.t1

Sequence Viewer

Length: 879 bp
ATGGGGGGACTTATGGCCAGTATTTTGATGACGCCCTGTGTACAACTATGGGGGAGACCATGGAATTTGCAAGACATAGGCACAGCGGCTACATTATTGGCCCTCCACGGCCTCTGCTTGTTTGCTCCCTTTCATTTCACCTGGGCTGCATTTTGGGTGGCCTTCGCTCTCTATATTCTCACCGGTTTGGGAGTCACTTTGGGTTTCCACAGACACCTTGCGCACAAGAGTTTCCAGCTTCCCAAATGGCTCGAGTACTTGTTTGCCTACTTAGGGGTTCTATCCTTTCAGGGAAGCCCAATAGAATGGGTGAGCACACACAGGTACCATCATCAGTTTACAGACAAAGAGAAAGACCCTCACAGTCCCTTGGATGGTTTCTGGTATAGTCATATGGGTTGGATCCTTGATAGCACCTCTCGCTATCTAAAATATGGAGGACGGAAGAACGTTGAGGATATGAAAAAGCAGTGGTTCTATAGGTTTCTTCATCATACATACGTCTTACACGTTTATGGTTCTGGAGCTTTGCTCTATGCCCTGGGTGGACTACCCTTCTTTATTTGGGGAATGGGAGTGAGGATGGTATATGTTTTCCACTTCACTTTGCTAGTGAACTCGGCCGGTCACATCTGGGGAAAACAAGTATGGAACACCGGCGACCTCTCGAAGAACAATTGGTTGTTGGGATGGACGTCACTTGGAGAAGGGTGGCACAACAACCATCATGCATTTGAAAACTCAGCTCGACACGGCCTGGAATGGTGGCAAGTCGACTTGACTTGGTATGCAATCAGAGCTCTTCAAGCAATTGGGTTGGCAACTGACGTCAAGACTCCTACTGAATCTCAGATGCGCAGCAAAGCCCTCAAGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

293

Amino Acids

33.73

Weight (kDa)

9.32

Isoelectric Point (pI)

30.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_desaturase PF00487 47 - 267 3.2e-18 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 698, 831
Acc16I TGCGCA 2 cut(s) 222, 857
Acc65I GGTACC 1 cut(s) 324
AccB1I GGYRCC 1 cut(s) 324
AccI GTMKAC 1 cut(s) 774
AciI CCGC 1 cut(s) 86
AclI AACGTT 1 cut(s) 450
AclWI GGATC 2 cut(s) 397, 410
AcoI YGGCCR 2 cut(s) 15, 621
AcsI RAATTY 1 cut(s) 64
AcyI GRCGYC 3 cut(s) 32, 695, 828
AfaI GTAC 3 cut(s) 42, 257, 326
AfiI CCNNNNNNNGG 2 cut(s) 273, 374
AflIII ACRYGT 1 cut(s) 508
AgeI ACCGGT 1 cut(s) 182
AgsI TTSAA 2 cut(s) 737, 806
AjnI CCWGG 3 cut(s) 140, 540, 756
AluBI AGCT 4 cut(s) 238, 527, 746, 800
AluI AGCT 4 cut(s) 238, 527, 746, 800
Alw21I GWGCWC 2 cut(s) 317, 802
Alw26I GTCTC 1 cut(s) 49
AlwI GGATC 2 cut(s) 397, 410
Ama87I CYCGRG 1 cut(s) 251
AoxI GGCC 6 cut(s) 15, 99, 109, 159, 621, 754
ApeKI GCWGC 2 cut(s) 146, 858
ApoI RAATTY 1 cut(s) 64
AsiGI ACCGGT 1 cut(s) 182
Asp718I GGTACC 1 cut(s) 324
AspLEI GCGC 2 cut(s) 223, 858
AspS9I GGNCC 1 cut(s) 100
AsuHPI GGTGA 3 cut(s) 130, 172, 322
AvaI CYCGRG 1 cut(s) 251
BaeI ACNNNNGTAYC 2 cut(s) 308, 341
BalI TGGCCA 1 cut(s) 17
BamHI GGATCC 1 cut(s) 402
BanI GGYRCC 1 cut(s) 324
BanII GRGCYC 1 cut(s) 802
Bbv12I GWGCWC 2 cut(s) 317, 802
BbvI GCAGC 2 cut(s) 133, 870
BccI CCATC 5 cut(s) 336, 368, 577, 684, 732
BceAI ACGGC 2 cut(s) 124, 769
BciT130I CCWGG 3 cut(s) 142, 542, 758
BcoDI GTCTC 1 cut(s) 49
BfaI CTAG 1 cut(s) 611
BfmI CTRYAG 1 cut(s) 478
BisI GCNGC 3 cut(s) 87, 147, 859
BlsI GCNGC 3 cut(s) 88, 148, 860
BmcAI AGTACT 1 cut(s) 257
Bme1390I CCNGG 3 cut(s) 142, 542, 758
BmeT110I CYCGRG 1 cut(s) 251
BmgT120I GGNCC 1 cut(s) 100
BmiI GGNNCC 2 cut(s) 326, 404
BmrFI CCNGG 3 cut(s) 142, 542, 758
BmsI GCATC 1 cut(s) 843
BplI GAGNNNNNCTC 2 cut(s) 516, 548
BpmI CTGGAG 1 cut(s) 543
BpuEI CTTGAG 1 cut(s) 854
BsaHI GRCGYC 3 cut(s) 32, 695, 828
BsaI GGTCTC 1 cut(s) 49
BsaJI CCNNGG 6 cut(s) 59, 106, 141, 369, 540, 541
BsaWI WCCGGW 1 cut(s) 182
Bsc4I CCNNNNNNNGG 2 cut(s) 273, 374
Bse118I RCCGGY 3 cut(s) 182, 623, 656
Bse1I ACTGG 1 cut(s) 18
BseBI CCWGG 3 cut(s) 142, 542, 758
BseDI CCNNGG 6 cut(s) 59, 106, 141, 369, 540, 541
BseGI GGATG 3 cut(s) 379, 588, 695
BseLI CCNNNNNNNGG 2 cut(s) 273, 374
BseMII CTCAG 2 cut(s) 756, 863
BseNI ACTGG 1 cut(s) 18
BseX3I CGGCCG 1 cut(s) 621
BseXI GCAGC 2 cut(s) 133, 870
Bsh1285I CGRYCG 1 cut(s) 624
BshFI GGCC 6 cut(s) 17, 101, 111, 161, 623, 756
BshNI GGYRCC 1 cut(s) 324
BshTI ACCGGT 1 cut(s) 182
BsiEI CGRYCG 1 cut(s) 624
BsiHKAI GWGCWC 2 cut(s) 317, 802
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 3 cut(s) 183, 624, 657
BslFI GGGAC 2 cut(s) 21, 351
BslI CCNNNNNNNGG 2 cut(s) 273, 374
BsmAI GTCTC 1 cut(s) 49
BsmFI GGGAC 2 cut(s) 21, 351
BsnI GGCC 6 cut(s) 17, 101, 111, 161, 623, 756
Bso31I GGTCTC 1 cut(s) 49
BsoBI CYCGRG 1 cut(s) 251
Bsp1286I GDGCHC 2 cut(s) 317, 802
Bsp1407I TGTACA 1 cut(s) 40
Bsp143I GATC 1 cut(s) 402
Bsp19I CCATGG 1 cut(s) 59
BspACI CCGC 1 cut(s) 86
BspANI GGCC 6 cut(s) 17, 101, 111, 161, 623, 756
BspCNI CTCAG 2 cut(s) 755, 862
BspLI GGNNCC 2 cut(s) 326, 404
BspPI GGATC 2 cut(s) 397, 410
BspQI GCTCTTC 1 cut(s) 807
BspT107I GGYRCC 1 cut(s) 324
BspTNI GGTCTC 1 cut(s) 49
BsrFI RCCGGY 3 cut(s) 182, 623, 656
BsrGI TGTACA 1 cut(s) 40
BsrI ACTGG 1 cut(s) 18
BssAI RCCGGY 3 cut(s) 182, 623, 656
BssECI CCNNGG 6 cut(s) 59, 106, 141, 369, 540, 541
BssMI GATC 1 cut(s) 402
BssNI GRCGYC 3 cut(s) 32, 695, 828
BssT1I CCWWGG 2 cut(s) 59, 369
Bst2UI CCWGG 3 cut(s) 142, 542, 758
Bst4CI ACNGT 1 cut(s) 365
Bst6I CTCTTC 1 cut(s) 807
BstACI GRCGYC 3 cut(s) 32, 695, 828
BstAUI TGTACA 1 cut(s) 40
BstDEI CTNAG 3 cut(s) 271, 742, 849
BstDSI CCRYGG 2 cut(s) 59, 106
BstF5I GGATG 3 cut(s) 379, 588, 695
BstHHI GCGC 2 cut(s) 223, 858
BstKTI GATC 1 cut(s) 405
BstMAI GTCTC 1 cut(s) 49
BstMBI GATC 1 cut(s) 402
BstMCI CGRYCG 1 cut(s) 624
BstMWI GCNNNNNNNGC 3 cut(s) 420, 797, 806
BstNI CCWGG 3 cut(s) 142, 542, 758
BstSCI CCNGG 3 cut(s) 140, 540, 756
BstSFI CTRYAG 1 cut(s) 478
BstV1I GCAGC 2 cut(s) 133, 870
BstX2I RGATCY 1 cut(s) 402
BstXI CCANNNNNNTGG 1 cut(s) 306
BstYI RGATCY 1 cut(s) 402
BstZI CGGCCG 1 cut(s) 621
BsuRI GGCC 6 cut(s) 17, 101, 111, 161, 623, 756
BtgI CCRYGG 2 cut(s) 59, 106
BtsCI GGATG 3 cut(s) 379, 588, 695
BtsI GCAGTG 1 cut(s) 476
BtsIMutI CAGTG 1 cut(s) 476
CfoI GCGC 2 cut(s) 223, 858
Cfr10I RCCGGY 3 cut(s) 182, 623, 656
Cfr13I GGNCC 1 cut(s) 100
CseI GACGC 1 cut(s) 40
Csp6I GTAC 3 cut(s) 41, 256, 325
CspAI ACCGGT 1 cut(s) 182
CviAII CATG 2 cut(s) 60, 728
CviQI GTAC 3 cut(s) 41, 256, 325
DdeI CTNAG 3 cut(s) 271, 742, 849
DpnI GATC 1 cut(s) 404
DpnII GATC 1 cut(s) 402
EaeI YGGCCR 2 cut(s) 15, 621
EagI CGGCCG 1 cut(s) 621
Eam1104I CTCTTC 1 cut(s) 807
EarI CTCTTC 1 cut(s) 807
Ecl136II GAGCTC 1 cut(s) 800
EclXI CGGCCG 1 cut(s) 621
Eco130I CCWWGG 2 cut(s) 59, 369
Eco24I GRGCYC 1 cut(s) 802
Eco31I GGTCTC 1 cut(s) 49
Eco52I CGGCCG 1 cut(s) 621
Eco53kI GAGCTC 1 cut(s) 800
Eco88I CYCGRG 1 cut(s) 251
EcoICRI GAGCTC 1 cut(s) 800
EcoRII CCWGG 3 cut(s) 140, 540, 756
EcoT14I CCWWGG 2 cut(s) 59, 369
EcoT22I ATGCAT 1 cut(s) 733
EcoT38I GRGCYC 1 cut(s) 802
ErhI CCWWGG 2 cut(s) 59, 369
FaeI CATG 2 cut(s) 63, 731
FaqI GGGAC 2 cut(s) 21, 351
FatI CATG 2 cut(s) 59, 727
FauNDI CATATG 1 cut(s) 393
FblI GTMKAC 1 cut(s) 774
Fnu4HI GCNGC 3 cut(s) 87, 147, 859
FokI GGATG 3 cut(s) 386, 595, 702
FriOI GRGCYC 1 cut(s) 802
Fsp4HI GCNGC 3 cut(s) 87, 147, 859
FspBI CTAG 1 cut(s) 611
FspI TGCGCA 2 cut(s) 222, 857
GlaI GCGC 2 cut(s) 222, 857
GluI GCNGC 3 cut(s) 87, 147, 859
GsuI CTGGAG 1 cut(s) 543
HaeIII GGCC 6 cut(s) 17, 101, 111, 161, 623, 756
HapII CCGG 3 cut(s) 183, 624, 657
HgaI GACGC 1 cut(s) 40
HhaI GCGC 2 cut(s) 223, 858
Hin1I GRCGYC 3 cut(s) 32, 695, 828
Hin1II CATG 2 cut(s) 63, 731
Hin6I GCGC 2 cut(s) 221, 856
HinP1I GCGC 2 cut(s) 221, 856
HincII GTYRAC 1 cut(s) 775
HindII GTYRAC 1 cut(s) 775
HinfI GANTC 3 cut(s) 192, 835, 845
HpaII CCGG 3 cut(s) 183, 624, 657
HphI GGTGA 3 cut(s) 130, 172, 322
Hpy166II GTNNAC 5 cut(s) 41, 339, 548, 616, 775
Hpy188I TCNGA 2 cut(s) 797, 852
Hpy188III TCNNGA 4 cut(s) 522, 667, 832, 871
Hpy8I GTNNAC 5 cut(s) 41, 339, 548, 616, 775
HpyAV CCTTC 3 cut(s) 172, 565, 701
HpyCH4III ACNGT 1 cut(s) 365
HpyCH4IV ACGT 5 cut(s) 450, 501, 510, 695, 828
HpyCH4V TGCA 4 cut(s) 70, 149, 731, 791
HpyF10VI GCNNNNNNNGC 3 cut(s) 420, 797, 806
HpyF3I CTNAG 3 cut(s) 271, 742, 849
HpySE526I ACGT 5 cut(s) 450, 501, 510, 695, 828
Hsp92I GRCGYC 3 cut(s) 32, 695, 828
Hsp92II CATG 2 cut(s) 63, 731
HspAI GCGC 2 cut(s) 221, 856
KpnI GGTACC 1 cut(s) 328
Kzo9I GATC 1 cut(s) 402
LguI GCTCTTC 1 cut(s) 807
LmnI GCTCC 2 cut(s) 130, 524
Lsp1109I GCAGC 2 cut(s) 133, 870
LweI GCATC 1 cut(s) 843
MaeI CTAG 1 cut(s) 611
MaeII ACGT 5 cut(s) 450, 501, 510, 695, 828
MaeIII GTNAC 3 cut(s) 193, 626, 696
MalI GATC 1 cut(s) 404
MboI GATC 1 cut(s) 402
MboII GAAGA 4 cut(s) 457, 479, 682, 794
MfeI CAATTG 2 cut(s) 676, 810
MflI RGATCY 1 cut(s) 402
MhlI GDGCHC 2 cut(s) 317, 802
MlsI TGGCCA 1 cut(s) 17
MluCI AATT 3 cut(s) 64, 676, 810
MluNI TGGCCA 1 cut(s) 17
MlyI GAGTC 2 cut(s) 201, 829
MmeI TCCRAC 1 cut(s) 380
MnlI CCTC 9 cut(s) 113, 122, 369, 427, 431, 448, 573, 674, 878
Mox20I TGGCCA 1 cut(s) 17
Mph1103I ATGCAT 1 cut(s) 733
MscI TGGCCA 1 cut(s) 17
MslI CAYNNNNRTG 1 cut(s) 513
Msp20I TGGCCA 1 cut(s) 17
MspA1I CMGCKG 1 cut(s) 86
MspI CCGG 3 cut(s) 183, 624, 657
MspR9I CCNGG 3 cut(s) 142, 542, 758
MunI CAATTG 2 cut(s) 676, 810
MvaI CCWGG 3 cut(s) 142, 542, 758
MwoI GCNNNNNNNGC 3 cut(s) 420, 797, 806
NcoI CCATGG 1 cut(s) 59
NdeI CATATG 1 cut(s) 393
NdeII GATC 1 cut(s) 402
NlaIII CATG 2 cut(s) 63, 731
NlaIV GGNNCC 2 cut(s) 326, 404
NmeAIII GCCGAG 1 cut(s) 599
NmuCI GTSAC 3 cut(s) 193, 626, 696
NsbI TGCGCA 2 cut(s) 222, 857
NsiI ATGCAT 1 cut(s) 733
PaeR7I CTCGAG 1 cut(s) 251
PasI CCCWGGG 1 cut(s) 541
PciSI GCTCTTC 1 cut(s) 807
PcsI WCGNNNNNNNCGW 1 cut(s) 507
PfeI GAWTC 1 cut(s) 845
PinAI ACCGGT 1 cut(s) 182
PkrI GCNGC 3 cut(s) 88, 148, 860
PleI GAGTC 2 cut(s) 200, 829
PpsI GAGTC 2 cut(s) 200, 829
Psp124BI GAGCTC 1 cut(s) 802
Psp1406I AACGTT 1 cut(s) 450
Psp6I CCWGG 3 cut(s) 140, 540, 756
PspGI CCWGG 3 cut(s) 140, 540, 756
PspN4I GGNNCC 2 cut(s) 326, 404
PspPI GGNCC 1 cut(s) 100
PspXI VCTCGAGB 1 cut(s) 251
PsuI RGATCY 1 cut(s) 402
RsaI GTAC 3 cut(s) 42, 257, 326
RsaNI GTAC 3 cut(s) 41, 256, 325
RseI CAYNNNNRTG 1 cut(s) 513
SacI GAGCTC 1 cut(s) 802
SalI GTCGAC 1 cut(s) 773
SapI GCTCTTC 1 cut(s) 807
SatI GCNGC 3 cut(s) 87, 147, 859
Sau3AI GATC 1 cut(s) 402
Sau96I GGNCC 1 cut(s) 100
ScaI AGTACT 1 cut(s) 257
SchI GAGTC 2 cut(s) 201, 829
ScrFI CCNGG 3 cut(s) 142, 542, 758
SduI GDGCHC 2 cut(s) 317, 802
SfaNI GCATC 1 cut(s) 843
SfcI CTRYAG 1 cut(s) 478
Sfr274I CTCGAG 1 cut(s) 251
SgrAI CRCCGGYG 1 cut(s) 656
SlaI CTCGAG 1 cut(s) 251
SmiMI CAYNNNNRTG 1 cut(s) 513
SmlI CTYRAG 2 cut(s) 251, 869
SmoI CTYRAG 2 cut(s) 251, 869
Sse9I AATT 3 cut(s) 64, 676, 810
SsiI CCGC 1 cut(s) 86
SspMI CTAG 1 cut(s) 611
SstI GAGCTC 1 cut(s) 802
StyD4I CCNGG 3 cut(s) 140, 540, 756
StyI CCWWGG 2 cut(s) 59, 369
TaaI ACNGT 1 cut(s) 365
TaiI ACGT 5 cut(s) 453, 504, 513, 698, 831
TaqI TCGA 4 cut(s) 252, 668, 748, 774
TasI AATT 3 cut(s) 64, 676, 810
TatI WGTACW 2 cut(s) 40, 255
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 1 cut(s) 845
TscAI CASTG 1 cut(s) 476
TseFI GTSAC 3 cut(s) 193, 626, 696
TseI GCWGC 2 cut(s) 146, 858
Tsp45I GTSAC 3 cut(s) 193, 626, 696
TspDTI ATGAA 3 cut(s) 122, 476, 479
TspGWI ACGGA 1 cut(s) 457
TspRI CASTG 1 cut(s) 476
XapI RAATTY 1 cut(s) 64
XhoI CTCGAG 1 cut(s) 251
XmiI GTMKAC 1 cut(s) 774
XspI CTAG 1 cut(s) 611
ZraI GACGTC 2 cut(s) 696, 829
ZrmI AGTACT 1 cut(s) 257
Zsp2I ATGCAT 1 cut(s) 733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.