Rorug04G0384700

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
55511009 .. 55512316
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0384700.1

Sequence Viewer

Length: 1308 bp
ATGGCAAGTTTTAGAAGAATCAGTGCTGTTTTTCTTCTTCTGTGTTTGCTGATTTGTTTACCACATGGAGTTTCATCACTTGGCATAAACTATGGCCAACTCGGTGACAATTTGCTGCCACCACAGCAAGTTGTGAACCTCCTAACCGCCAACAACATCACCAAAACAAGAATCTACGACACAAATCCACAAATATTAACTGCATTCGCCAATTCCAATATTGAGCTAATTGTGACAGTTGAAAATGAAGTGCTGGGAGAATTAACCAATTCTGAAGCAGGCCTTCAATGGGTTAGCTCACACATCAAGCCTTACTTTCCCGCAACCAAAATCACAGGCATTGCTGTAGGCAACGAGATTGATGCAACGGATTTGCTACCTAGCCTTGTACCAGCCATGTCCAGCATTCAAGGGGCACTTTCTCAGCTAGGCCTTGACTCACATATCAAGGTGTCATCGCCTTTTTCTTATTCGGTGATCAAAGAGTCTTATCCGCCTTCTGCTGGCAGTTTCAAAAGCGAGGTCTCCAGTGTAATGTCACAATTGTTACAGTTTCTGTCAAGCACAAAGGCACCATTTTGGATCAATGCATATCCTTACTTTGCATACAAGGGCAACTCGAAAGAAATTCCTCTAGACTATGTGCTTTTCAGTAATGCCGGTTCATCAGCAGGAGTGACTGACCCTACTAGCAATTTGCACTATGACAACATGTTGTATGCTCAAGTAGATGCAGTCACTTATGCCATTTCTAAATTGGGCTTTGATGGCATAGAGGTTAGGGTCGCAGAGACAGGGTGGCCATCAAAAGGGGATGCTGGTGAACTTGGTGCAAGTTTAGAGAATGCTGCTATATACAATGGGAACTTGTTGAAGAGGCAATTGGCCAACGAAGGTACACCTTTGAAGCCTAAGCTTGACGTCTATATTTTTGCTCTTTTCAACGAGAACAAGAAGCCTGGACCAACATCGGAGAGGAATTTTGGTCTATTTCAACCGGATGGAACTTCGGCTTACAATTTGGGCTTGTCTGGATCATCATCTACCTCAACTAATGCCCCATCACCCCCATCGCCAAGCCTATCAAAACCACCAACTTCAGCTACCAACTCAACTGGTGCCTCATCATCACCCTCAATCCCAATAAAATCATCAAGCTCGGCTACTAATTCAACTAATGCCTCATCCCCCTCGTCACTTCCTGAGATTGATATGACTTATTCCTCTAGTGCCAAGGCAGCAACAATGGGAAGCTTGGTGTACATTTTTCTTGGTGTATTGACCTTCCAATTTTATATGATGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

435

Amino Acids

46.23

Weight (kDa)

5.32

Isoelectric Point (pI)

48.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 27 - 341 4.4e-81 Glycosyl hydrolases family 17
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 924
AccB1I GGYRCC 2 cut(s) 571, 1118
AciI CCGC 3 cut(s) 147, 321, 494
AclWI GGATC 2 cut(s) 590, 1042
AcoI YGGCCR 3 cut(s) 94, 800, 885
AcsI RAATTY 2 cut(s) 627, 979
AcuI CTGAAG 2 cut(s) 294, 1083
AcyI GRCGYC 1 cut(s) 921
AfaI GTAC 3 cut(s) 390, 898, 1262
AfiI CCNNNNNNNGG 3 cut(s) 289, 503, 809
AflIII ACRYGT 1 cut(s) 711
AgsI TTSAA 9 cut(s) 242, 287, 410, 514, 874, 907, 943, 995, 1173
AjnI CCWGG 1 cut(s) 958
AjuI GAANNNNNNNTTGG 2 cut(s) 866, 898
AluBI AGCT 7 cut(s) 226, 297, 427, 916, 1103, 1158, 1254
AluI AGCT 7 cut(s) 226, 297, 427, 916, 1103, 1158, 1254
Alw26I GTCTC 2 cut(s) 529, 785
AlwI GGATC 2 cut(s) 590, 1042
AlwNI CAGNNNCTG 1 cut(s) 556
AoxI GGCC 5 cut(s) 94, 280, 430, 800, 885
ApeKI GCWGC 3 cut(s) 115, 848, 1238
ApoI RAATTY 2 cut(s) 627, 979
ArsI GACNNNNNNTTYG 2 cut(s) 507, 539
AspS9I GGNCC 1 cut(s) 962
AsuHPI GGTGA 6 cut(s) 116, 151, 487, 833, 1056, 1122
AvaII GGWCC 1 cut(s) 962
BaeGI GKGCMC 1 cut(s) 418
BalI TGGCCA 3 cut(s) 96, 802, 887
BanI GGYRCC 2 cut(s) 571, 1118
BbvI GCAGC 3 cut(s) 102, 835, 1250
BccI CCATC 5 cut(s) 761, 811, 995, 1069, 1078
BcgI CGANNNNNNTGC 2 cut(s) 344, 378
BciT130I CCWGG 1 cut(s) 960
BclI TGATCA 1 cut(s) 477
BcoDI GTCTC 2 cut(s) 529, 785
BfaI CTAG 6 cut(s) 381, 428, 635, 690, 1227, 1306
BfmI CTRYAG 1 cut(s) 345
BisI GCNGC 3 cut(s) 116, 849, 1239
BlsI GCNGC 3 cut(s) 117, 850, 1240
Bme1390I CCNGG 1 cut(s) 960
Bme18I GGWCC 1 cut(s) 962
BmgT120I GGNCC 1 cut(s) 962
BmiI GGNNCC 2 cut(s) 573, 1120
BmrFI CCNGG 1 cut(s) 960
BmsI GCATC 3 cut(s) 352, 721, 805
BpmI CTGGAG 1 cut(s) 511
Bpu10I CCTNAGC 1 cut(s) 912
BpuEI CTTGAG 1 cut(s) 708
BsaBI GATNNNNATC 1 cut(s) 1039
BsaHI GRCGYC 1 cut(s) 921
BsaI GGTCTC 1 cut(s) 529
BsaJI CCNNGG 1 cut(s) 1233
BsaWI WCCGGW 1 cut(s) 997
Bsc4I CCNNNNNNNGG 3 cut(s) 289, 503, 809
Bse118I RCCGGY 1 cut(s) 659
Bse1I ACTGG 2 cut(s) 528, 1120
Bse3DI GCAATG 1 cut(s) 339
Bse8I GATNNNNATC 1 cut(s) 1039
BseBI CCWGG 1 cut(s) 960
BseDI CCNNGG 1 cut(s) 1233
BseGI GGATG 3 cut(s) 820, 1006, 1184
BseJI GATNNNNATC 1 cut(s) 1039
BseLI CCNNNNNNNGG 3 cut(s) 289, 503, 809
BseMI GCAATG 1 cut(s) 339
BseMII CTCAG 2 cut(s) 437, 1194
BseNI ACTGG 2 cut(s) 528, 1120
BseSI GKGCMC 1 cut(s) 418
BseXI GCAGC 3 cut(s) 102, 835, 1250
BseYI CCCAGC 1 cut(s) 253
BshFI GGCC 5 cut(s) 96, 282, 432, 802, 887
BshNI GGYRCC 2 cut(s) 571, 1118
BsiSI CCGG 2 cut(s) 660, 998
BslI CCNNNNNNNGG 3 cut(s) 289, 503, 809
BsmAI GTCTC 2 cut(s) 529, 785
BsmI GAATGC 3 cut(s) 203, 405, 850
BsnI GGCC 5 cut(s) 96, 282, 432, 802, 887
Bso31I GGTCTC 1 cut(s) 529
Bsp1286I GDGCHC 1 cut(s) 418
Bsp1407I TGTACA 1 cut(s) 1260
Bsp143I GATC 4 cut(s) 477, 582, 1034, 1302
BspACI CCGC 3 cut(s) 147, 321, 494
BspANI GGCC 5 cut(s) 96, 282, 432, 802, 887
BspCNI CTCAG 2 cut(s) 436, 1195
BspLI GGNNCC 2 cut(s) 573, 1120
BspPI GGATC 2 cut(s) 590, 1042
BspT107I GGYRCC 2 cut(s) 571, 1118
BspTNI GGTCTC 1 cut(s) 529
BsrDI GCAATG 1 cut(s) 339
BsrFI RCCGGY 1 cut(s) 659
BsrGI TGTACA 1 cut(s) 1260
BsrI ACTGG 2 cut(s) 528, 1120
BssAI RCCGGY 1 cut(s) 659
BssECI CCNNGG 1 cut(s) 1233
BssMI GATC 4 cut(s) 477, 582, 1034, 1302
BssNI GRCGYC 1 cut(s) 921
BssT1I CCWWGG 1 cut(s) 1233
Bst2UI CCWGG 1 cut(s) 960
Bst4CI ACNGT 2 cut(s) 238, 552
Bst6I CTCTTC 1 cut(s) 869
BstACI GRCGYC 1 cut(s) 921
BstAUI TGTACA 1 cut(s) 1260
BstC8I GCNNGC 2 cut(s) 280, 505
BstDEI CTNAG 3 cut(s) 423, 912, 1203
BstF5I GGATG 3 cut(s) 820, 1006, 1184
BstKTI GATC 4 cut(s) 480, 585, 1037, 1305
BstMAI GTCTC 2 cut(s) 529, 785
BstMBI GATC 4 cut(s) 477, 582, 1034, 1302
BstMWI GCNNNNNNNGC 3 cut(s) 124, 768, 1238
BstNI CCWGG 1 cut(s) 960
BstNSI RCATGY 1 cut(s) 715
BstSCI CCNGG 1 cut(s) 958
BstSFI CTRYAG 1 cut(s) 345
BstSLI GKGCMC 1 cut(s) 418
BstV1I GCAGC 3 cut(s) 102, 835, 1250
BsuRI GGCC 5 cut(s) 96, 282, 432, 802, 887
BtgZI GCGATG 2 cut(s) 441, 1056
BtsCI GGATG 3 cut(s) 820, 1006, 1184
BtsIMutI CAGTG 2 cut(s) 28, 535
Cac8I GCNNGC 2 cut(s) 280, 505
CaiI CAGNNNCTG 1 cut(s) 556
Cfr10I RCCGGY 1 cut(s) 659
Cfr13I GGNCC 1 cut(s) 962
Csp6I GTAC 3 cut(s) 389, 897, 1261
CviAII CATG 3 cut(s) 65, 397, 712
CviQI GTAC 3 cut(s) 389, 897, 1261
DdeI CTNAG 3 cut(s) 423, 912, 1203
DpnI GATC 4 cut(s) 479, 584, 1036, 1304
DpnII GATC 4 cut(s) 477, 582, 1034, 1302
EaeI YGGCCR 3 cut(s) 94, 800, 885
Eam1104I CTCTTC 1 cut(s) 869
EarI CTCTTC 1 cut(s) 869
EciI GGCGGA 1 cut(s) 483
Eco130I CCWWGG 1 cut(s) 1233
Eco147I AGGCCT 2 cut(s) 282, 432
Eco31I GGTCTC 1 cut(s) 529
Eco47I GGWCC 1 cut(s) 962
Eco57I CTGAAG 2 cut(s) 294, 1083
EcoRII CCWGG 1 cut(s) 958
EcoT14I CCWWGG 1 cut(s) 1233
EcoT22I ATGCAT 1 cut(s) 592
ErhI CCWWGG 1 cut(s) 1233
FaeI CATG 3 cut(s) 68, 400, 715
FalI AAGNNNNNCTT 6 cut(s) 267, 299, 299, 331, 402, 434
FatI CATG 3 cut(s) 64, 396, 711
FauI CCCGC 1 cut(s) 328
FbaI TGATCA 1 cut(s) 477
Fnu4HI GCNGC 3 cut(s) 116, 849, 1239
FokI GGATG 3 cut(s) 827, 1013, 1171
Fsp4HI GCNGC 3 cut(s) 116, 849, 1239
FspBI CTAG 6 cut(s) 381, 428, 635, 690, 1227, 1306
GluI GCNGC 3 cut(s) 116, 849, 1239
GsaI CCCAGC 1 cut(s) 257
GsuI CTGGAG 1 cut(s) 511
HaeIII GGCC 5 cut(s) 96, 282, 432, 802, 887
HapII CCGG 2 cut(s) 660, 998
Hin1I GRCGYC 1 cut(s) 921
Hin1II CATG 3 cut(s) 68, 400, 715
HindIII AAGCTT 2 cut(s) 914, 1252
HinfI GANTC 4 cut(s) 18, 171, 437, 485
HpaII CCGG 2 cut(s) 660, 998
HphI GGTGA 6 cut(s) 116, 151, 487, 833, 1056, 1122
Hpy166II GTNNAC 5 cut(s) 59, 136, 824, 899, 1261
Hpy188I TCNGA 2 cut(s) 274, 973
Hpy188III TCNNGA 3 cut(s) 635, 1032, 1202
Hpy8I GTNNAC 5 cut(s) 59, 136, 824, 899, 1261
HpyAV CCTTC 4 cut(s) 293, 507, 887, 1294
HpyCH4III ACNGT 2 cut(s) 238, 552
HpyCH4IV ACGT 1 cut(s) 921
HpyCH4V TGCA 7 cut(s) 203, 365, 590, 605, 700, 734, 833
HpyF10VI GCNNNNNNNGC 3 cut(s) 124, 768, 1238
HpyF3I CTNAG 3 cut(s) 423, 912, 1203
HpySE526I ACGT 1 cut(s) 921
Hsp92I GRCGYC 1 cut(s) 921
Hsp92II CATG 3 cut(s) 68, 400, 715
Ksp22I TGATCA 1 cut(s) 477
Kzo9I GATC 4 cut(s) 477, 582, 1034, 1302
Lsp1109I GCAGC 3 cut(s) 102, 835, 1250
LweI GCATC 3 cut(s) 352, 721, 805
MaeI CTAG 6 cut(s) 381, 428, 635, 690, 1227, 1306
MaeII ACGT 1 cut(s) 921
MaeIII GTNAC 7 cut(s) 104, 232, 537, 546, 676, 736, 1194
MalI GATC 4 cut(s) 479, 584, 1036, 1304
MboI GATC 4 cut(s) 477, 582, 1034, 1302
MboII GAAGA 4 cut(s) 26, 27, 29, 886
MfeI CAATTG 2 cut(s) 542, 881
MhlI GDGCHC 1 cut(s) 418
MlsI TGGCCA 3 cut(s) 96, 802, 887
MluNI TGGCCA 3 cut(s) 96, 802, 887
MlyI GAGTC 2 cut(s) 431, 494
Mox20I TGGCCA 3 cut(s) 96, 802, 887
Mph1103I ATGCAT 1 cut(s) 592
MscI TGGCCA 3 cut(s) 96, 802, 887
MseI TTAA 2 cut(s) 197, 263
Msp20I TGGCCA 3 cut(s) 96, 802, 887
MspI CCGG 2 cut(s) 660, 998
MspR9I CCNGG 1 cut(s) 960
MunI CAATTG 2 cut(s) 542, 881
Mva1269I GAATGC 3 cut(s) 203, 405, 850
MvaI CCWGG 1 cut(s) 960
MwoI GCNNNNNNNGC 3 cut(s) 124, 768, 1238
NdeII GATC 4 cut(s) 477, 582, 1034, 1302
NlaIII CATG 3 cut(s) 68, 400, 715
NlaIV GGNNCC 2 cut(s) 573, 1120
NmeAIII GCCGAG 1 cut(s) 1139
NmuCI GTSAC 6 cut(s) 104, 232, 537, 676, 736, 1194
NsiI ATGCAT 1 cut(s) 592
NspI RCATGY 1 cut(s) 715
PceI AGGCCT 2 cut(s) 282, 432
PciI ACATGT 1 cut(s) 711
PctI GAATGC 3 cut(s) 203, 405, 850
PfeI GAWTC 2 cut(s) 18, 171
PkrI GCNGC 3 cut(s) 117, 850, 1240
PleI GAGTC 2 cut(s) 431, 493
PpsI GAGTC 2 cut(s) 431, 493
PscI ACATGT 1 cut(s) 711
Psp6I CCWGG 1 cut(s) 958
PspFI CCCAGC 1 cut(s) 253
PspGI CCWGG 1 cut(s) 958
PspN4I GGNNCC 2 cut(s) 573, 1120
PspPI GGNCC 1 cut(s) 962
PsrI GAACNNNNNNTAC 2 cut(s) 646, 678
PstNI CAGNNNCTG 1 cut(s) 556
RsaI GTAC 3 cut(s) 390, 898, 1262
RsaNI GTAC 3 cut(s) 389, 897, 1261
SaqAI TTAA 2 cut(s) 197, 263
SatI GCNGC 3 cut(s) 116, 849, 1239
Sau3AI GATC 4 cut(s) 477, 582, 1034, 1302
Sau96I GGNCC 1 cut(s) 962
SchI GAGTC 2 cut(s) 431, 494
ScrFI CCNGG 1 cut(s) 960
SduI GDGCHC 1 cut(s) 418
SfaNI GCATC 3 cut(s) 352, 721, 805
SfcI CTRYAG 1 cut(s) 345
SinI GGWCC 1 cut(s) 962
SmlI CTYRAG 1 cut(s) 723
SmoI CTYRAG 1 cut(s) 723
SseBI AGGCCT 2 cut(s) 282, 432
SsiI CCGC 3 cut(s) 147, 321, 494
SspI AATATT 2 cut(s) 195, 220
SspMI CTAG 6 cut(s) 381, 428, 635, 690, 1227, 1306
StuI AGGCCT 2 cut(s) 282, 432
StyD4I CCNGG 1 cut(s) 958
StyI CCWWGG 1 cut(s) 1233
TaaI ACNGT 2 cut(s) 238, 552
TaiI ACGT 1 cut(s) 924
TaqI TCGA 1 cut(s) 620
TatI WGTACW 1 cut(s) 1260
TfiI GAWTC 2 cut(s) 18, 171
Tru1I TTAA 2 cut(s) 197, 263
Tru9I TTAA 2 cut(s) 197, 263
TscAI CASTG 2 cut(s) 28, 535
TseFI GTSAC 6 cut(s) 104, 232, 537, 676, 736, 1194
TseI GCWGC 3 cut(s) 115, 848, 1238
Tsp45I GTSAC 6 cut(s) 104, 232, 537, 676, 736, 1194
TspDTI ATGAA 3 cut(s) 63, 261, 654
TspGWI ACGGA 1 cut(s) 383
TspRI CASTG 2 cut(s) 28, 535
VpaK11BI GGWCC 1 cut(s) 962
XapI RAATTY 2 cut(s) 627, 979
XbaI TCTAGA 1 cut(s) 634
XceI RCATGY 1 cut(s) 715
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XspI CTAG 6 cut(s) 381, 428, 635, 690, 1227, 1306
ZraI GACGTC 1 cut(s) 922
Zsp2I ATGCAT 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.