Rorug02G0463500

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000059
Physical Location & Seq
Forward (+)
59454352 .. 59460401
6050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0463500.1

Sequence Viewer

Length: 1254 bp
ATGGTTAGAGCAGCTGGGAAGCACACATCGGCTCGTTTGGTCTTGATTTGCGTTGGCCTTCTGGGTATTGCTCTCATTGCTGATTTCCTCTGGGCTTCTTCTTCTTCTTCTCGTTTTGCTCTCATTTCCGCCAATTGGGCTCCTCCTGTTTCGGTACTCACCCCCATCATAATACCCAACAAGGGAGTTGACAGTCAAAAGAACAATACGCCTACTGGGAGGGTTTTGTCTGCAACTTTTGCTGATTTGCCTGCACCAGAACTAAAATGGGAAAAGATGGCTGCCGCACCTGTGCCTCGTTTGGATGGGGCTGCTATACAGATTAAGAATCTTCTATACGTGTTTGCTGGATACAGTACAATTGATTATGTACATTCACATGTTGACATCTACAATTTCAGTGATAATACATGGGGAGGAAGATTTGATATGCCGAAAGAAATGGCACATTCTCATCTAGGAATGGTAACCGATGGAAGGTACATATACATTGTCAATGGACAGTATGGGCCACAGTGCAGAGGGCCCACATCTCATACATTCATCCTTGATACTCAGACAAAGAAGTGGCAGAATATGCCCCCATTACCAGTTCCAAGGTATGCACCAGCAACTCAACTTTGGAGAGGTAGACTCCATGTAATGGGCGGTAGCAAGGAAAATCGACATACACCTGCAGTAGACCATTGGAGTCTTGCTGTAAAAGATGGAAAAGCATTAGAAAAGGAATGGAGGACTGAAGTGCCTATTCCCAAGGGAGGACCTCATAGGGCTTCTATAGTTTATAATGATCGTCTTTATGTTATGGGTGGTCAAGAGGGTGATTTCATGGCAAAACCTGGATCACCTATTTTCAAGTGCTCACGTAGGAATGAGGTTGTATATGGCGATGTTTACATGCTGGATGATGAACTGAAGTGGAAAGTGTTACCTCCTATGCCTAAGCCAGATTCCCACATTGAATTTGCTTGGGCTCTTGTTGACAATTCTGTTATTATTGTTGGAGGCACAACAGAGAAGCACCCTATAACTAAGAAGATGGTTTTGGTTGGAGAAATGTTCCAGTTTAACTTCGATACTCTGAACTGGTCAGTCATAGGGAAACTGCCATTTCGAGTTAAAACCACGCTGGTAGGTTTCTGGAAAGGGTGGTTGTATTTCACATCAGGACAGCGGGACAAAGGACCAGAGGATCCAGCACCAAAGAAAGTGATTGGAGAACTGTGGAGAACAAATTTAAACCTGGGCTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FA_desaturase

Protein Analysis

417

Amino Acids

46.55

Weight (kDa)

9.37

Isoelectric Point (pI)

27.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 88 - 194 2.6e-08 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 90 - 236 1.6e-07 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 109 - 276 1.4e-09 Attractin/LZTR1 beta-propeller
Kelch_KLHDC2_KLHL20_DRC7 PF24681 146 - 336 4.2e-15 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_FKB95 PF25210 150 - 273 3.2e-11 FKB95, Kelch-repeats domain
Beta-prop_FBX42 PF13415 153 - 275 9.3e-07 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 209 - 367 3.9e-10 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 210 - 365 4.9e-08 FBX42, beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 786
AarI CACCTGC 1 cut(s) 682
Acc36I ACCTGC 1 cut(s) 682
AccB7I CCANNNNNTGG 1 cut(s) 643
AccI GTMKAC 2 cut(s) 631, 681
AciI CCGC 4 cut(s) 129, 285, 648, 1174
AclWI GGATC 3 cut(s) 850, 1187, 1200
AcsI RAATTY 2 cut(s) 962, 1234
AcuI CTGAAG 2 cut(s) 759, 935
AfaI GTAC 4 cut(s) 156, 358, 372, 482
AfiI CCNNNNNNNGG 5 cut(s) 135, 182, 477, 643, 758
AflIII ACRYGT 2 cut(s) 339, 379
AgsI TTSAA 2 cut(s) 856, 962
AjnI CCWGG 2 cut(s) 838, 1242
AjuI GAANNNNNNNTTGG 2 cut(s) 1028, 1060
AluBI AGCT 1 cut(s) 14
AluI AGCT 1 cut(s) 14
Alw21I GWGCWC 1 cut(s) 863
AlwI GGATC 3 cut(s) 850, 1187, 1200
AoxI GGCC 3 cut(s) 55, 509, 524
ApaI GGGCCC 1 cut(s) 528
ApeKI GCWGC 3 cut(s) 11, 281, 311
ApoI RAATTY 2 cut(s) 962, 1234
AspS9I GGNCC 5 cut(s) 509, 524, 525, 761, 1184
AsuHPI GGTGA 3 cut(s) 151, 833, 837
AvaII GGWCC 2 cut(s) 761, 1184
BaeGI GKGCMC 1 cut(s) 528
BamHI GGATCC 1 cut(s) 1192
BanII GRGCYC 4 cut(s) 142, 528, 976, 1250
Bbv12I GWGCWC 1 cut(s) 863
BbvI GCAGC 3 cut(s) 23, 268, 298
BccI CCATC 6 cut(s) 173, 271, 299, 467, 701, 1033
BciT130I CCWGG 2 cut(s) 840, 1244
BciVI GTATCC 1 cut(s) 344
BfaI CTAG 1 cut(s) 458
BfmI CTRYAG 2 cut(s) 675, 777
BfuAI ACCTGC 1 cut(s) 682
BfuI GTATCC 1 cut(s) 344
BglI GCCNNNNNGGC 1 cut(s) 137
BisI GCNGC 4 cut(s) 12, 282, 285, 312
BlsI GCNGC 4 cut(s) 13, 283, 286, 313
Bme1390I CCNGG 2 cut(s) 840, 1244
Bme18I GGWCC 2 cut(s) 761, 1184
BmgT120I GGNCC 5 cut(s) 509, 524, 525, 761, 1184
BmiI GGNNCC 4 cut(s) 141, 526, 1194, 1249
BmrFI CCNGG 2 cut(s) 840, 1244
BmrI ACTGGG 1 cut(s) 225
BmuI ACTGGG 1 cut(s) 225
BplI GAGNNNNNCTC 2 cut(s) 618, 650
Bpu10I CCTNAGC 1 cut(s) 942
BsaAI YACGTR 2 cut(s) 340, 866
BsaJI CCNNGG 3 cut(s) 596, 753, 1243
BsaXI ACNNNNNCTCC 1 cut(s) 1232
Bsc4I CCNNNNNNNGG 5 cut(s) 135, 182, 477, 643, 758
Bse1I ACTGG 4 cut(s) 220, 590, 1063, 1091
Bse3DI GCAATG 1 cut(s) 75
BseBI CCWGG 2 cut(s) 840, 1244
BseDI CCNNGG 3 cut(s) 596, 753, 1243
BseGI GGATG 3 cut(s) 310, 543, 910
BseLI CCNNNNNNNGG 5 cut(s) 135, 182, 477, 643, 758
BseMI GCAATG 1 cut(s) 75
BseMII CTCAG 1 cut(s) 569
BseNI ACTGG 4 cut(s) 220, 590, 1063, 1091
BseRI GAGGAG 1 cut(s) 132
BseSI GKGCMC 1 cut(s) 528
BseXI GCAGC 3 cut(s) 23, 268, 298
BseYI CCCAGC 1 cut(s) 14
BsgI GTGCAG 2 cut(s) 237, 538
BshFI GGCC 3 cut(s) 57, 511, 526
BsiHKAI GWGCWC 1 cut(s) 863
BslFI GGGAC 1 cut(s) 1190
BslI CCNNNNNNNGG 5 cut(s) 135, 182, 477, 643, 758
BsmFI GGGAC 1 cut(s) 1190
BsnI GGCC 3 cut(s) 57, 511, 526
Bsp120I GGGCCC 1 cut(s) 524
Bsp1286I GDGCHC 5 cut(s) 142, 528, 863, 976, 1250
Bsp1407I TGTACA 1 cut(s) 370
Bsp143I GATC 3 cut(s) 790, 842, 1192
BspACI CCGC 4 cut(s) 129, 285, 648, 1174
BspANI GGCC 3 cut(s) 57, 511, 526
BspCNI CTCAG 1 cut(s) 568
BspLI GGNNCC 4 cut(s) 141, 526, 1194, 1249
BspMAI CTGCAG 1 cut(s) 679
BspMI ACCTGC 1 cut(s) 682
BspPI GGATC 3 cut(s) 850, 1187, 1200
BsrDI GCAATG 1 cut(s) 75
BsrGI TGTACA 1 cut(s) 370
BsrI ACTGG 4 cut(s) 220, 590, 1063, 1091
BssECI CCNNGG 3 cut(s) 596, 753, 1243
BssMI GATC 3 cut(s) 790, 842, 1192
BssT1I CCWWGG 2 cut(s) 596, 753
Bst2UI CCWGG 2 cut(s) 840, 1244
Bst4CI ACNGT 5 cut(s) 194, 356, 504, 516, 1224
BstAPI GCANNNNNTGC 2 cut(s) 239, 577
BstAUI TGTACA 1 cut(s) 370
BstBAI YACGTR 2 cut(s) 340, 866
BstC8I GCNNGC 1 cut(s) 252
BstDEI CTNAG 3 cut(s) 555, 942, 1032
BstEII GGTNACC 1 cut(s) 466
BstF5I GGATG 3 cut(s) 310, 543, 910
BstKTI GATC 3 cut(s) 793, 845, 1195
BstMBI GATC 3 cut(s) 790, 842, 1192
BstMWI GCNNNNNNNGC 4 cut(s) 77, 137, 239, 577
BstNI CCWGG 2 cut(s) 840, 1244
BstNSI RCATGY 2 cut(s) 383, 901
BstPI GGTNACC 1 cut(s) 466
BstSCI CCNGG 2 cut(s) 838, 1242
BstSFI CTRYAG 2 cut(s) 675, 777
BstSLI GKGCMC 1 cut(s) 528
BstV1I GCAGC 3 cut(s) 23, 268, 298
BstX2I RGATCY 1 cut(s) 1192
BstYI RGATCY 1 cut(s) 1192
BsuI GTATCC 1 cut(s) 344
BsuRI GGCC 3 cut(s) 57, 511, 526
BtgZI GCGATG 1 cut(s) 903
BtsCI GGATG 3 cut(s) 310, 543, 910
BtsIMutI CAGTG 2 cut(s) 406, 521
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 1 cut(s) 252
Cfr13I GGNCC 5 cut(s) 509, 524, 525, 761, 1184
Csp6I GTAC 4 cut(s) 155, 357, 371, 481
CviAII CATG 5 cut(s) 380, 411, 638, 829, 898
CviQI GTAC 4 cut(s) 155, 357, 371, 481
DdeI CTNAG 3 cut(s) 555, 942, 1032
DpnI GATC 3 cut(s) 792, 844, 1194
DpnII GATC 3 cut(s) 790, 842, 1192
DraI TTTAAA 1 cut(s) 1239
EciI GGCGGA 1 cut(s) 118
Eco130I CCWWGG 2 cut(s) 596, 753
Eco24I GRGCYC 4 cut(s) 142, 528, 976, 1250
Eco47I GGWCC 2 cut(s) 761, 1184
Eco57I CTGAAG 2 cut(s) 759, 935
Eco91I GGTNACC 1 cut(s) 466
EcoO109I RGGNCCY 2 cut(s) 524, 761
EcoO65I GGTNACC 1 cut(s) 466
EcoRII CCWGG 2 cut(s) 838, 1242
EcoT14I CCWWGG 2 cut(s) 596, 753
EcoT38I GRGCYC 4 cut(s) 142, 528, 976, 1250
ErhI CCWWGG 2 cut(s) 596, 753
FaeI CATG 5 cut(s) 383, 414, 641, 832, 901
FaqI GGGAC 1 cut(s) 1190
FatI CATG 5 cut(s) 379, 410, 637, 828, 897
FauI CCCGC 1 cut(s) 1167
FblI GTMKAC 2 cut(s) 631, 681
Fnu4HI GCNGC 4 cut(s) 12, 282, 285, 312
FokI GGATG 3 cut(s) 317, 530, 917
FriOI GRGCYC 4 cut(s) 142, 528, 976, 1250
Fsp4HI GCNGC 4 cut(s) 12, 282, 285, 312
FspBI CTAG 1 cut(s) 458
GluI GCNGC 4 cut(s) 12, 282, 285, 312
GsaI CCCAGC 1 cut(s) 18
HaeIII GGCC 3 cut(s) 57, 511, 526
Hin1II CATG 5 cut(s) 383, 414, 641, 832, 901
HincII GTYRAC 3 cut(s) 190, 385, 982
HindII GTYRAC 3 cut(s) 190, 385, 982
HinfI GANTC 4 cut(s) 328, 633, 691, 950
HphI GGTGA 3 cut(s) 151, 833, 837
Hpy166II GTNNAC 6 cut(s) 190, 385, 632, 682, 895, 982
Hpy188I TCNGA 2 cut(s) 558, 1083
Hpy188III TCNNGA 5 cut(s) 43, 815, 1141, 1167, 1251
Hpy8I GTNNAC 6 cut(s) 190, 385, 632, 682, 895, 982
HpyAV CCTTC 2 cut(s) 68, 471
HpyCH4III ACNGT 5 cut(s) 194, 356, 504, 516, 1224
HpyCH4IV ACGT 2 cut(s) 339, 865
HpyCH4V TGCA 5 cut(s) 233, 254, 519, 605, 677
HpyF10VI GCNNNNNNNGC 4 cut(s) 77, 137, 239, 577
HpyF3I CTNAG 3 cut(s) 555, 942, 1032
HpySE526I ACGT 2 cut(s) 339, 865
Hsp92II CATG 5 cut(s) 383, 414, 641, 832, 901
Kzo9I GATC 3 cut(s) 790, 842, 1192
LmnI GCTCC 2 cut(s) 145, 1253
Lsp1109I GCAGC 3 cut(s) 23, 268, 298
MaeI CTAG 1 cut(s) 458
MaeII ACGT 2 cut(s) 339, 865
MaeIII GTNAC 2 cut(s) 466, 927
MalI GATC 3 cut(s) 792, 844, 1194
MboI GATC 3 cut(s) 790, 842, 1192
MboII GAAGA 7 cut(s) 90, 93, 96, 99, 323, 432, 1048
MfeI CAATTG 2 cut(s) 133, 360
MflI RGATCY 1 cut(s) 1192
MhlI GDGCHC 5 cut(s) 142, 528, 863, 976, 1250
MluCI AATT 6 cut(s) 133, 360, 394, 962, 985, 1234
MlyI GAGTC 2 cut(s) 627, 700
MmeI TCCRAC 2 cut(s) 982, 1030
MseI TTAA 4 cut(s) 324, 1068, 1119, 1238
MslI CAYNNNNRTG 1 cut(s) 378
MspA1I CMGCKG 2 cut(s) 14, 1174
MspR9I CCNGG 2 cut(s) 840, 1244
MunI CAATTG 2 cut(s) 133, 360
MvaI CCWGG 2 cut(s) 840, 1244
MwoI GCNNNNNNNGC 4 cut(s) 77, 137, 239, 577
NdeII GATC 3 cut(s) 790, 842, 1192
NlaIII CATG 5 cut(s) 383, 414, 641, 832, 901
NlaIV GGNNCC 4 cut(s) 141, 526, 1194, 1249
NspI RCATGY 2 cut(s) 383, 901
PaqCI CACCTGC 1 cut(s) 682
PciI ACATGT 1 cut(s) 379
PfeI GAWTC 2 cut(s) 328, 950
PflMI CCANNNNNTGG 1 cut(s) 643
PkrI GCNGC 4 cut(s) 13, 283, 286, 313
PleI GAGTC 2 cut(s) 627, 699
PpsI GAGTC 2 cut(s) 627, 699
Ppu21I YACGTR 2 cut(s) 340, 866
PpuMI RGGWCCY 1 cut(s) 761
PscI ACATGT 1 cut(s) 379
PsiI TTATAA 1 cut(s) 786
Psp5II RGGWCCY 1 cut(s) 761
Psp6I CCWGG 2 cut(s) 838, 1242
PspEI GGTNACC 1 cut(s) 466
PspFI CCCAGC 1 cut(s) 14
PspGI CCWGG 2 cut(s) 838, 1242
PspN4I GGNNCC 4 cut(s) 141, 526, 1194, 1249
PspOMI GGGCCC 1 cut(s) 524
PspPI GGNCC 5 cut(s) 509, 524, 525, 761, 1184
PspPPI RGGWCCY 1 cut(s) 761
PstI CTGCAG 1 cut(s) 679
PsuI RGATCY 1 cut(s) 1192
PvuII CAGCTG 1 cut(s) 14
RsaI GTAC 4 cut(s) 156, 358, 372, 482
RsaNI GTAC 4 cut(s) 155, 357, 371, 481
RseI CAYNNNNRTG 1 cut(s) 378
SaqAI TTAA 4 cut(s) 324, 1068, 1119, 1238
SatI GCNGC 4 cut(s) 12, 282, 285, 312
Sau3AI GATC 3 cut(s) 790, 842, 1192
Sau96I GGNCC 5 cut(s) 509, 524, 525, 761, 1184
SchI GAGTC 2 cut(s) 627, 700
ScrFI CCNGG 2 cut(s) 840, 1244
SduI GDGCHC 5 cut(s) 142, 528, 863, 976, 1250
SfcI CTRYAG 2 cut(s) 675, 777
SinI GGWCC 2 cut(s) 761, 1184
SmiMI CAYNNNNRTG 1 cut(s) 378
Sse9I AATT 6 cut(s) 133, 360, 394, 962, 985, 1234
SsiI CCGC 4 cut(s) 129, 285, 648, 1174
SspMI CTAG 1 cut(s) 458
StyD4I CCNGG 2 cut(s) 838, 1242
StyI CCWWGG 2 cut(s) 596, 753
TaaI ACNGT 5 cut(s) 194, 356, 504, 516, 1224
TaiI ACGT 2 cut(s) 342, 868
TaqI TCGA 3 cut(s) 664, 1074, 1114
TasI AATT 6 cut(s) 133, 360, 394, 962, 985, 1234
TatI WGTACW 2 cut(s) 356, 370
TauI GCSGC 1 cut(s) 287
TfiI GAWTC 2 cut(s) 328, 950
Tru1I TTAA 4 cut(s) 324, 1068, 1119, 1238
Tru9I TTAA 4 cut(s) 324, 1068, 1119, 1238
TscAI CASTG 2 cut(s) 406, 521
TseI GCWGC 3 cut(s) 11, 281, 311
TspDTI ATGAA 3 cut(s) 532, 817, 924
TspRI CASTG 2 cut(s) 406, 521
Van91I CCANNNNNTGG 1 cut(s) 643
VpaK11BI GGWCC 2 cut(s) 761, 1184
XapI RAATTY 2 cut(s) 962, 1234
XceI RCATGY 2 cut(s) 383, 901
XcmI CCANNNNNNNNNTGG 1 cut(s) 264
XmiI GTMKAC 2 cut(s) 631, 681
XspI CTAG 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.