Rorug05G0263300

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
29887275 .. 29893336
6062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0263300.1

Sequence Viewer

Length: 3516 bp
ATGAGAATGAAGTATCTTAATTCTGTTCTCAAACAAGAAGTTTCCTTCTTTGACACCCAAACTGCTGGTTCTTCAACAACCTTCCAAGTTATTTCAATCATCTCCTCCGATGCCAATGCAGTGCAAGTTGCTTTATGCGAGAAGATACCTGACTGCATAGCATACATGTCAACTTTCTTCTTCTGCCATATATTTGCCTTCACACTTTCATGGAGGTTGGCCTTGGCTGCGATGCCACTTTCAATCTCGTTCATAGCTCCCGGGCTTTTCTTTGGAAGTATCTTGATGGGCCTTGTAATGAAGGGGATTGGGGCTTATGGAGTTGCCGGAGGGATTGCTGAACAAGCAATTTCTTCAGTAAGAACTGTATATTCATATGTTGGGGAGAACCAAACACTAAAGAGGTTCAGCATTGCACTTCAGACTGTTACGAAAATTGGAATCAAGGTGGGTCTTGTGAAAGGAATCCTGATGGGAAGCATGGGAATCATTTACGTCGGTTGGGGTTTTCAGGCATGGGTTGGGACTTATTTGGTTACTCAAAAAGGAGAAGATGGAGGGCATGTCTTCGTAGCCGGTTTCAATGTCCTCATGGGAGGCCTGAGTATTTTAAGTGCACTTCCAAATTTAACTGCCATCACAGAGGCATTAGCTGCTACAACACGAATTCTTGAAATGATTGACCGTGTTCCTAGTATTGAAACTGAAGACAGAAAGGGGAAGGCTTTGTCACATGTGAGAGGAGAAATAGAGTTCCAAGACATATACTTCAGTTACCCATCAAGACCTGACAGCCAAGTCTTACAAGGCTTGAATCTTAAGATTCCGGCTGGTAAGAGTGTAGGTCTAGTTGGGGGAAGTGGCTCTGGCAAGTCGACAATCATTTCATTGATCGAAAGATTTTATGACCCGGTTGAAGGAGAAATACTCTTGGATGGACATGCAATCAGAAGACTTCAACCGAAATGGTTGAGATCCCAAATGGGTTTAGTTAATCAGGAACCTGTTCTGTTTGCAACTTCTATAAGAGAGAACATACTTTTTGGAAAGGAAGGAGCTTCAATGGATGAAATAACAAATGCAGCTAAAGCTGCAAATGCACATGACTTCATTGTCAAGTTACCTGATGGATATGAAACTCAAGCTGGTCAATTTGGATTCCAACTGTCTGGTGGGCAAAAGCAGCGAATAGCCATAGCGAGAGCTCTGCTCAGGGATCCGAAAATCTTACTTCTTGATGAAGCAACTAGTGCATTGGATGCACAGTCTGAAAGAGTAGTTCAGGAGGCAATTGATCAAGCATCAAAAGGGAGGACAACAATCATTATTGCCCATCGGCTGTCAACAATCCGAACAGCAAACTTGATTGTGGTTCTTCAAGCTGGGAAAGTAATTGAATCAGGCTCACACAATGAGCTAATGAGAAAGAATGGGGAGAAGGGAGGTGAATACTTCAAGATGGTCCAGTTGCAGCAGATGGCAACCCAAAATGAAGCTCCGGAAGATAGTCAAGTATATGATAAACCTCGGCGTAGGAGGAGTGCTGCACCAAGCCCCATTAGTGCCCGATCAAGTACTCACAACACTCCAATATACTCCTTCAGTGGTACTGGAATGTCCATCTCTATGGGTACCCCCCTGTCCATGGGGACACCCAGGTCTACCATGGGCACACCCTATTCGTTCTCTGTCCAATACGATCCTGATGATGGGAGTTATGATGAAGACTTAAAGAACTCAACTTATCCTCCTCCTTCTCAATGGCGCCTGCTGAAGATGAATGCACCAGAGTGGGGACAAGCATTACTTGGATGCTTGGGTGCAATAGGTTCTGGGGCAGTACAACCTATTAATGCCTACTGTGTAGGCTCACTTATATCAGTCTACTTCCTCCAGGATAAATCAGAAATCAAGTCCCAATCAAGAGTCTTGACCTTTGTTTTCATAGGCATTGGTGTTTTCAACTTCTTCACCAATCTCATCCAACACTATAACTTTGCAATTATGGGAGAAAAGTTGACAACGAGGGTAAGAGAGCAACTGCTTGAAAAGCTTATGACGTTCGAAATTGGGTGGTTTGATGAAGATGAGAACACAAGTGCAGCTATCTGTGCAAGGCTAGCCACTGAAGTAAACATGGTTCGATCTCTTGTTGGTGACAGAATGTCATTGCTGGTCCAAGCAGTTTTCGGGGCTACCTTTGCTTACACAGTAGGACTTGTGCTGACATGGAGACTATCCCTTGTGATGATAGCAGTGCAGCCACTAGTCATTGGGAGCTTTTATGCAAGGAGTATCTTGATGAAGAGTATGGGTGAGAAGGCGAGAAAAGCTCAAAAAGAAGGAAGCCAATTGGCAAGTGAAGCTGTTACTAACCACAGAACTATAACAGCCTTCTCTTCACAGAAAAAGATTTTGGGGCTGTTTGGTGCAACCTTGGCTGGTCCTAAGAAGGAGAGTATCAAGCAATCCTATGTTTCTGGTGCTGGCTTGTTTAGCTCCCAATTCTTTAACACGGCGGCTACAGCTTTAGCCTACTGGTATGGTGGGAGGCTACTGGTGCTAGAGTTGATAACCCCAAAGCATCTTTTTCAGGCCTTCTTGATATTGCTGTTCACTGCTTATATTATTGCAGAAGCTGGAAGCATGACTTCTGATATATCTAAAGGGGCCAGTGCCATTCAAGCAGTTTTTGCAATTTTAGATAGGAAAACTGAGATTGATCCGGACAACAAATGGGGACTGGAGATAAAGAGGAGGGTGAAGGGGCGTGTCGAGCTCAAAAATGTTTTCTTTGCATATCCAACAAGACCTGAGCAGATGATTCTTAAGGGACTGAGCCTCAGAATTGATGCAGGCAAAACTGTGGCACTAGTTGGGCAGAGTGGTTCAGGCAAATCCACCATTATTGGGCTGATTGAGAGGTTTTATGATCCAATGAAGGGATCAGTATTTATAGATGAGCAGGATATTAAGAACTACAACTTGAGACTGCTGAGGGCACATGTAGCCTTGGTTAGTCAGGAGCCTACTTTGTTTGCTGGAACTATCCGTGAAAATATCGCCTATGGTAAAGAGAATTCGAAGGATTCTGAGATAAAGAGGGCTGCAGTTCTGGCCAATGCTCATGAATTTATAAGTGGGATGAATGATGGTTATAACACATACTGTGGAGAGAGAGGAGTTCAGCTATCAGGAGGCCAGAAACAAAGGATTGCACTAGCTCGGGCAATTCTGAAGAATCCATCAATCCTCCTCCTGGATGAGGCCACAAGTGCACTTGACAGCGTGTCAGAAAACGCAGTTCAAGAAGCACTAGAGAAGATGATGGTTAACAGAACATGTATAGTCATTGCTCACCGGCTATCCACAATACAGAAGGCCAACTCCATTGCTGTGATCAAGAATGGAAAGGTTGCGGAACAAGGTTCACATAACGAACTGATTTCATTAGGGCGCAACGGTGCATACTACTCACAGATAAAGCTACAAACTGGTAGCTCACCTCCAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1171

Amino Acids

127.77

Weight (kDa)

9.19

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 1 - 199 7.8e-27 ABC transporter transmembrane region
ABC_tran PF00005 268 - 417 3.2e-33 ABC transporter
ABC_membrane PF00664 603 - 874 2.1e-45 ABC transporter transmembrane region
ABC_tran PF00005 943 - 1092 1.1e-32 ABC transporter
SMC_N PF02463 956 - 1135 5.8e-06 RecF/RecN/SMC N terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3137, 3159
AasI GACNNNNNNGTC 3 cut(s) 797, 1112, 1657
Acc65I GGTACC 1 cut(s) 1631
AccB1I GGYRCC 2 cut(s) 1631, 1764
AccI GTMKAC 3 cut(s) 875, 1661, 1884
AccIII TCCGGA 2 cut(s) 1498, 2725
AciI CCGC 2 cut(s) 2519, 3419
AclWI GGATC 7 cut(s) 969, 1211, 1224, 1694, 2717, 2927, 2953
AcoI YGGCCR 1 cut(s) 3117
AcsI RAATTY 4 cut(s) 625, 666, 3079, 3131
AcuI CTGAAG 8 cut(s) 339, 404, 726, 754, 1585, 1793, 2148, 3257
AcyI GRCGYC 1 cut(s) 1765
AfaI GTAC 4 cut(s) 1576, 1609, 1633, 1842
AfiI CCNNNNNNNGG 8 cut(s) 917, 1645, 1709, 1793, 2910, 2942, 3259, 3265
AflII CTTAAG 2 cut(s) 818, 2828
AflIII ACRYGT 4 cut(s) 165, 733, 3004, 3341
AhdI GACNNNNNGTC 2 cut(s) 2164, 3289
AhlI ACTAGT 3 cut(s) 1247, 2266, 2872
AjnI CCWGG 3 cut(s) 1655, 1893, 3258
AjuI GAANNNNNNNTTGG 2 cut(s) 2399, 2431
AleI CACNNNNGTG 1 cut(s) 1789
Alw21I GWGCWC 4 cut(s) 619, 1207, 2781, 3280
Alw26I GTCTC 2 cut(s) 2227, 2983
Alw44I GTGCAC 2 cut(s) 615, 3276
AlwI GGATC 7 cut(s) 969, 1211, 1224, 1694, 2717, 2927, 2953
AlwNI CAGNNNCTG 1 cut(s) 2639
Ama87I CYCGRG 2 cut(s) 260, 3225
Aor13HI TCCGGA 2 cut(s) 1498, 2725
AoxI GGCC 9 cut(s) 219, 289, 598, 2595, 2670, 3117, 3199, 3267, 3381
ApaLI GTGCAC 2 cut(s) 615, 3276
ApoI RAATTY 4 cut(s) 625, 666, 3079, 3131
AseI ATTAAT 1 cut(s) 1851
Asp700I GAANNNNTTC 1 cut(s) 1005
Asp718I GGTACC 1 cut(s) 1631
AspLEI GCGC 2 cut(s) 1767, 3459
AspS9I GGNCC 5 cut(s) 289, 1462, 2176, 2444, 2670
AsuC2I CCSGG 3 cut(s) 261, 262, 911
AsuHPI GGTGA 7 cut(s) 1457, 1963, 2168, 2327, 2773, 3350, 3495
AsuII TTCGAA 2 cut(s) 2064, 3083
AsuNHI GCTAGC 1 cut(s) 2119
AvaI CYCGRG 2 cut(s) 260, 3225
AvaII GGWCC 3 cut(s) 1462, 2176, 2444
BaeGI GKGCMC 5 cut(s) 619, 1567, 1673, 3004, 3280
BalI TGGCCA 1 cut(s) 3119
BamHI GGATCC 1 cut(s) 1216
BanI GGYRCC 2 cut(s) 1631, 1764
BanII GRGCYC 2 cut(s) 1207, 2781
BarI GAAGNNNNNNTAC 2 cut(s) 909, 941
BbsI GAAGAC 4 cut(s) 559, 714, 958, 1731
Bbv12I GWGCWC 4 cut(s) 619, 1207, 2781, 3280
BbvCI CCTCAGC 1 cut(s) 2996
BceAI ACGGC 1 cut(s) 2532
BcgI CGANNNNNNTGC 4 cut(s) 98, 132, 1189, 1223
BciT130I CCWGG 3 cut(s) 1657, 1895, 3260
BclI TGATCA 2 cut(s) 1294, 3399
BcnI CCSGG 3 cut(s) 261, 262, 911
BcoDI GTCTC 2 cut(s) 2227, 2983
BcuI ACTAGT 3 cut(s) 1247, 2266, 2872
BfaI CTAG 9 cut(s) 693, 848, 1248, 2120, 2267, 2564, 2873, 3221, 3317
BfmI CTRYAG 2 cut(s) 2523, 3108
BfoI RGCGCY 1 cut(s) 1768
BfrI CTTAAG 2 cut(s) 818, 2828
BmcAI AGTACT 1 cut(s) 1576
Bme1390I CCNGG 6 cut(s) 261, 262, 911, 1657, 1895, 3260
Bme18I GGWCC 3 cut(s) 1462, 2176, 2444
BmeRI GACNNNNNGTC 2 cut(s) 2164, 3289
BmeT110I CYCGRG 2 cut(s) 260, 3225
BmgT120I GGNCC 5 cut(s) 289, 1462, 2176, 2444, 2670
BmiI GGNNCC 6 cut(s) 1002, 1218, 1633, 1766, 2671, 3027
BmrFI CCNGG 6 cut(s) 261, 262, 911, 1657, 1895, 3260
BmsI GCATC 7 cut(s) 100, 222, 1249, 1310, 1802, 2593, 2842
BmtI GCTAGC 1 cut(s) 2123
BpiI GAAGAC 4 cut(s) 559, 714, 958, 1731
BplI GAGNNNNNCTC 6 cut(s) 912, 944, 1194, 1226, 2317, 2349
BpmI CTGGAG 2 cut(s) 1877, 2765
Bpu10I CCTNAGC 3 cut(s) 1211, 2814, 2996
Bpu14I TTCGAA 2 cut(s) 2064, 3083
BpuEI CTTGAG 2 cut(s) 1125, 3007
BpuMI CCSGG 3 cut(s) 261, 262, 911
BsaHI GRCGYC 1 cut(s) 1765
BsaJI CCNNGG 9 cut(s) 222, 260, 1526, 1644, 1655, 1665, 2436, 3012, 3509
BsaWI WCCGGW 2 cut(s) 1498, 2725
BsaXI ACNNNNNCTCC 4 cut(s) 549, 579, 1732, 1762
Bsc4I CCNNNNNNNGG 8 cut(s) 917, 1645, 1709, 1793, 2910, 2942, 3259, 3265
Bse118I RCCGGY 2 cut(s) 575, 3360
Bse1I ACTGG 7 cut(s) 1465, 1615, 2543, 2562, 2673, 2748, 3499
Bse3DI GCAATG 4 cut(s) 411, 2168, 3351, 3390
BseAI TCCGGA 2 cut(s) 1498, 2725
BseBI CCWGG 3 cut(s) 1657, 1895, 3260
BseDI CCNNGG 9 cut(s) 222, 260, 1526, 1644, 1655, 1665, 2436, 3012, 3509
BseGI GGATG 7 cut(s) 940, 1072, 1264, 1817, 1980, 3150, 3268
BseLI CCNNNNNNNGG 8 cut(s) 917, 1645, 1709, 1793, 2910, 2942, 3259, 3265
BseMI GCAATG 4 cut(s) 411, 2168, 3351, 3390
BseMII CTCAG 8 cut(s) 593, 1225, 2706, 2805, 2828, 2857, 2987, 3084
BseNI ACTGG 7 cut(s) 1465, 1615, 2543, 2562, 2673, 2748, 3499
BseRI GAGGAG 7 cut(s) 94, 756, 1552, 1740, 2770, 3195, 3245
BseSI GKGCMC 5 cut(s) 619, 1567, 1673, 3004, 3280
BseYI CCCAGC 1 cut(s) 1382
BsgI GTGCAG 3 cut(s) 1530, 2121, 2279
BshFI GGCC 9 cut(s) 221, 291, 600, 2597, 2672, 3119, 3201, 3269, 3383
BshNI GGYRCC 2 cut(s) 1631, 1764
BsiHKAI GWGCWC 4 cut(s) 619, 1207, 2781, 3280
BsiHKCI CYCGRG 2 cut(s) 260, 3225
BsiSI CCGG 8 cut(s) 261, 327, 576, 827, 911, 1499, 2726, 3361
BslFI GGGAC 6 cut(s) 538, 1663, 1809, 1900, 2754, 2847
BslI CCNNNNNNNGG 8 cut(s) 917, 1645, 1709, 1793, 2910, 2942, 3259, 3265
BsmAI GTCTC 2 cut(s) 2227, 2983
BsmFI GGGAC 6 cut(s) 538, 1663, 1809, 1900, 2754, 2847
BsmI GAATGC 1 cut(s) 1786
BsnI GGCC 9 cut(s) 221, 291, 600, 2597, 2672, 3119, 3201, 3269, 3383
BsoBI CYCGRG 2 cut(s) 260, 3225
Bsp119I TTCGAA 2 cut(s) 2064, 3083
Bsp1286I GDGCHC 7 cut(s) 619, 1207, 1567, 1673, 2781, 3004, 3280
Bsp13I TCCGGA 2 cut(s) 1498, 2725
Bsp19I CCATGG 2 cut(s) 1644, 1665
BspACI CCGC 2 cut(s) 2519, 3419
BspANI GGCC 9 cut(s) 221, 291, 600, 2597, 2672, 3119, 3201, 3269, 3383
BspCNI CTCAG 8 cut(s) 594, 1224, 2707, 2806, 2829, 2856, 2988, 3085
BspEI TCCGGA 2 cut(s) 1498, 2725
BspHI TCATGA 1 cut(s) 3127
BspLI GGNNCC 6 cut(s) 1002, 1218, 1633, 1766, 2671, 3027
BspMAI CTGCAG 1 cut(s) 3112
BspOI GCTAGC 1 cut(s) 2123
BspPI GGATC 7 cut(s) 969, 1211, 1224, 1694, 2717, 2927, 2953
BspT104I TTCGAA 2 cut(s) 2064, 3083
BspT107I GGYRCC 2 cut(s) 1631, 1764
BspTI CTTAAG 2 cut(s) 818, 2828
BsrDI GCAATG 4 cut(s) 411, 2168, 3351, 3390
BsrFI RCCGGY 2 cut(s) 575, 3360
BsrI ACTGG 7 cut(s) 1465, 1615, 2543, 2562, 2673, 2748, 3499
BssAI RCCGGY 2 cut(s) 575, 3360
BssECI CCNNGG 9 cut(s) 222, 260, 1526, 1644, 1655, 1665, 2436, 3012, 3509
BssNI GRCGYC 1 cut(s) 1765
BssT1I CCWWGG 6 cut(s) 222, 1644, 1665, 2436, 3012, 3509
Bst2UI CCWGG 3 cut(s) 1657, 1895, 3260
Bst6I CTCTTC 2 cut(s) 2300, 2404
BstACI GRCGYC 1 cut(s) 1765
BstAFI CTTAAG 2 cut(s) 818, 2828
BstAPI GCANNNNNTGC 4 cut(s) 653, 1250, 1259, 2693
BstBI TTCGAA 2 cut(s) 2064, 3083
BstC8I GCNNGC 4 cut(s) 1769, 2121, 2488, 2857
BstDEI CTNAG 9 cut(s) 602, 1211, 2448, 2715, 2814, 2837, 2843, 2996, 3093
BstDSI CCRYGG 2 cut(s) 1644, 1665
BstENI CCTNNNNNAGG 1 cut(s) 3263
BstF5I GGATG 7 cut(s) 940, 1072, 1264, 1817, 1980, 3150, 3268
BstH2I RGCGCY 1 cut(s) 1768
BstHHI GCGC 2 cut(s) 1767, 3459
BstMAI GTCTC 2 cut(s) 2227, 2983
BstNI CCWGG 3 cut(s) 1657, 1895, 3260
BstNSI RCATGY 6 cut(s) 169, 566, 737, 944, 3008, 3345
BstSCI CCNGG 6 cut(s) 259, 260, 909, 1655, 1893, 3258
BstSFI CTRYAG 2 cut(s) 2523, 3108
BstSLI GKGCMC 5 cut(s) 619, 1567, 1673, 3004, 3280
BstV2I GAAGAC 4 cut(s) 559, 714, 958, 1731
BstX2I RGATCY 2 cut(s) 974, 1216
BstXI CCANNNNNNTGG 3 cut(s) 65, 1169, 1627
BstYI RGATCY 2 cut(s) 974, 1216
BsuRI GGCC 9 cut(s) 221, 291, 600, 2597, 2672, 3119, 3201, 3269, 3383
BtgI CCRYGG 2 cut(s) 1644, 1665
BtgZI GCGATG 1 cut(s) 245
BtsCI GGATG 7 cut(s) 940, 1072, 1264, 1817, 1980, 3150, 3268
BtsI GCAGTG 3 cut(s) 126, 2262, 2616
BtsIMutI CAGTG 6 cut(s) 126, 1609, 2124, 2262, 2616, 2680
Cac8I GCNNGC 4 cut(s) 1769, 2121, 2488, 2857
CaiI CAGNNNCTG 1 cut(s) 2639
CciI TCATGA 1 cut(s) 3127
CfoI GCGC 2 cut(s) 1767, 3459
Cfr10I RCCGGY 2 cut(s) 575, 3360
Cfr13I GGNCC 5 cut(s) 289, 1462, 2176, 2444, 2670
Cfr9I CCCGGG 1 cut(s) 260
Csp6I GTAC 4 cut(s) 1575, 1608, 1632, 1841
CspCI CAANNNNNGTGG 2 cut(s) 2890, 2925
CviQI GTAC 4 cut(s) 1575, 1608, 1632, 1841
DdeI CTNAG 9 cut(s) 602, 1211, 2448, 2715, 2814, 2837, 2843, 2996, 3093
DinI GGCGCC 1 cut(s) 1766
DrdI GACNNNNNNGTC 3 cut(s) 797, 1112, 1657
DriI GACNNNNNGTC 2 cut(s) 2164, 3289
DseDI GACNNNNNNGTC 3 cut(s) 797, 1112, 1657
EaeI YGGCCR 1 cut(s) 3117
Eam1104I CTCTTC 2 cut(s) 2300, 2404
Eam1105I GACNNNNNGTC 2 cut(s) 2164, 3289
EarI CTCTTC 2 cut(s) 2300, 2404
Ecl136II GAGCTC 2 cut(s) 1205, 2779
Eco130I CCWWGG 6 cut(s) 222, 1644, 1665, 2436, 3012, 3509
Eco147I AGGCCT 2 cut(s) 600, 2597
Eco24I GRGCYC 2 cut(s) 1207, 2781
Eco47I GGWCC 3 cut(s) 1462, 2176, 2444
Eco53kI GAGCTC 2 cut(s) 1205, 2779
Eco57I CTGAAG 8 cut(s) 339, 404, 726, 754, 1585, 1793, 2148, 3257
Eco88I CYCGRG 2 cut(s) 260, 3225
EcoICRI GAGCTC 2 cut(s) 1205, 2779
EcoNI CCTNNNNNAGG 1 cut(s) 3263
EcoRI GAATTC 2 cut(s) 666, 3079
EcoRII CCWGG 3 cut(s) 1655, 1893, 3258
EcoT14I CCWWGG 6 cut(s) 222, 1644, 1665, 2436, 3012, 3509
EcoT38I GRGCYC 2 cut(s) 1207, 2781
EgeI GGCGCC 1 cut(s) 1766
EheI GGCGCC 1 cut(s) 1766
ErhI CCWWGG 6 cut(s) 222, 1644, 1665, 2436, 3012, 3509
FalI AAGNNNNNCTT 4 cut(s) 1791, 1823, 2635, 2667
FaqI GGGAC 6 cut(s) 538, 1663, 1809, 1900, 2754, 2847
FauNDI CATATG 1 cut(s) 376
FbaI TGATCA 2 cut(s) 1294, 3399
FblI GTMKAC 3 cut(s) 875, 1661, 1884
FokI GGATG 7 cut(s) 947, 1079, 1271, 1824, 1967, 3157, 3275
FriOI GRGCYC 2 cut(s) 1207, 2781
FspBI CTAG 9 cut(s) 693, 848, 1248, 2120, 2267, 2564, 2873, 3221, 3317
GlaI GCGC 2 cut(s) 1766, 3458
GsaI CCCAGC 1 cut(s) 1386
GsuI CTGGAG 2 cut(s) 1877, 2765
HaeII RGCGCY 1 cut(s) 1768
HaeIII GGCC 9 cut(s) 221, 291, 600, 2597, 2672, 3119, 3201, 3269, 3383
HapII CCGG 8 cut(s) 261, 327, 576, 827, 911, 1499, 2726, 3361
HhaI GCGC 2 cut(s) 1767, 3459
Hin1I GRCGYC 1 cut(s) 1765
Hin6I GCGC 2 cut(s) 1765, 3457
HinP1I GCGC 2 cut(s) 1765, 3457
HincII GTYRAC 5 cut(s) 171, 876, 1344, 2019, 3334
HindII GTYRAC 5 cut(s) 171, 876, 1344, 2019, 3334
HindIII AAGCTT 1 cut(s) 2051
HpaI GTTAAC 1 cut(s) 3334
HpaII CCGG 8 cut(s) 261, 327, 576, 827, 911, 1499, 2726, 3361
HphI GGTGA 7 cut(s) 1457, 1963, 2168, 2327, 2773, 3350, 3495
Hpy99I CGWCG 1 cut(s) 500
HpyCH4IV ACGT 2 cut(s) 495, 2060
HpyF3I CTNAG 9 cut(s) 602, 1211, 2448, 2715, 2814, 2837, 2843, 2996, 3093
HpySE526I ACGT 2 cut(s) 495, 2060
Hsp92I GRCGYC 1 cut(s) 1765
HspAI GCGC 2 cut(s) 1765, 3457
KasI GGCGCC 1 cut(s) 1764
Kpn2I TCCGGA 2 cut(s) 1498, 2725
KpnI GGTACC 1 cut(s) 1635
Ksp22I TGATCA 2 cut(s) 1294, 3399
KspAI GTTAAC 1 cut(s) 3334
LmnI GCTCC 6 cut(s) 262, 1055, 1501, 2277, 2504, 3025
LweI GCATC 7 cut(s) 100, 222, 1249, 1310, 1802, 2593, 2842
MaeI CTAG 9 cut(s) 693, 848, 1248, 2120, 2267, 2564, 2873, 3221, 3317
MaeII ACGT 2 cut(s) 495, 2060
MaeIII GTNAC 7 cut(s) 427, 535, 729, 773, 1119, 2156, 2368
MfeI CAATTG 2 cut(s) 1290, 2351
MflI RGATCY 2 cut(s) 974, 1216
MhlI GDGCHC 7 cut(s) 619, 1207, 1567, 1673, 2781, 3004, 3280
MlsI TGGCCA 1 cut(s) 3119
MluNI TGGCCA 1 cut(s) 3119
Mly113I GGCGCC 1 cut(s) 1765
MlyI GAGTC 1 cut(s) 1935
MmeI TCCRAC 3 cut(s) 1186, 2008, 2828
Mox20I TGGCCA 1 cut(s) 3119
MroI TCCGGA 2 cut(s) 1498, 2725
MroXI GAANNNNTTC 1 cut(s) 1005
MscI TGGCCA 1 cut(s) 3119
MslI CAYNNNNRTG 4 cut(s) 208, 1625, 1789, 3395
Msp20I TGGCCA 1 cut(s) 3119
MspCI CTTAAG 2 cut(s) 818, 2828
MspI CCGG 8 cut(s) 261, 327, 576, 827, 911, 1499, 2726, 3361
MspR9I CCNGG 6 cut(s) 261, 262, 911, 1657, 1895, 3260
MunI CAATTG 2 cut(s) 1290, 2351
Mva1269I GAATGC 1 cut(s) 1786
MvaI CCWGG 3 cut(s) 1657, 1895, 3260
NarI GGCGCC 1 cut(s) 1765
NciI CCSGG 3 cut(s) 261, 262, 911
NcoI CCATGG 2 cut(s) 1644, 1665
NdeI CATATG 1 cut(s) 376
NheI GCTAGC 1 cut(s) 2119
NlaIV GGNNCC 6 cut(s) 1002, 1218, 1633, 1766, 2671, 3027
NmeAIII GCCGAG 1 cut(s) 1507
NmuCI GTSAC 2 cut(s) 729, 2156
NspI RCATGY 6 cut(s) 169, 566, 737, 944, 3008, 3345
NspV TTCGAA 2 cut(s) 2064, 3083
OliI CACNNNNGTG 1 cut(s) 1789
PagI TCATGA 1 cut(s) 3127
PceI AGGCCT 2 cut(s) 600, 2597
PciI ACATGT 4 cut(s) 165, 733, 3004, 3341
PctI GAATGC 1 cut(s) 1786
PdmI GAANNNNTTC 1 cut(s) 1005
PfoI TCCNGGA 2 cut(s) 1893, 3258
PleI GAGTC 1 cut(s) 1934
PluTI GGCGCC 1 cut(s) 1768
PpsI GAGTC 1 cut(s) 1934
PscI ACATGT 4 cut(s) 165, 733, 3004, 3341
PshBI ATTAAT 1 cut(s) 1851
PsiI TTATAA 2 cut(s) 3137, 3159
Psp124BI GAGCTC 2 cut(s) 1207, 2781
Psp6I CCWGG 3 cut(s) 1655, 1893, 3258
PspFI CCCAGC 1 cut(s) 1382
PspGI CCWGG 3 cut(s) 1655, 1893, 3258
PspN4I GGNNCC 6 cut(s) 1002, 1218, 1633, 1766, 2671, 3027
PspPI GGNCC 5 cut(s) 289, 1462, 2176, 2444, 2670
PsrI GAACNNNNNNTAC 2 cut(s) 2124, 2156
PstI CTGCAG 1 cut(s) 3112
PstNI CAGNNNCTG 1 cut(s) 2639
PsuI RGATCY 2 cut(s) 974, 1216
RsaI GTAC 4 cut(s) 1576, 1609, 1633, 1842
RsaNI GTAC 4 cut(s) 1575, 1608, 1632, 1841
RseI CAYNNNNRTG 4 cut(s) 208, 1625, 1789, 3395
SacI GAGCTC 2 cut(s) 1207, 2781
SalI GTCGAC 1 cut(s) 874
Sau96I GGNCC 5 cut(s) 289, 1462, 2176, 2444, 2670
ScaI AGTACT 1 cut(s) 1576
SchI GAGTC 1 cut(s) 1935
ScrFI CCNGG 6 cut(s) 261, 262, 911, 1657, 1895, 3260
SduI GDGCHC 7 cut(s) 619, 1207, 1567, 1673, 2781, 3004, 3280
SfaNI GCATC 7 cut(s) 100, 222, 1249, 1310, 1802, 2593, 2842
SfcI CTRYAG 2 cut(s) 2523, 3108
SfoI GGCGCC 1 cut(s) 1766
SfuI TTCGAA 2 cut(s) 2064, 3083
SinI GGWCC 3 cut(s) 1462, 2176, 2444
SmaI CCCGGG 1 cut(s) 262
SmiMI CAYNNNNRTG 4 cut(s) 208, 1625, 1789, 3395
SmlI CTYRAG 4 cut(s) 818, 1140, 2828, 2986
SmoI CTYRAG 4 cut(s) 818, 1140, 2828, 2986
SpeI ACTAGT 3 cut(s) 1247, 2266, 2872
SseBI AGGCCT 2 cut(s) 600, 2597
SsiI CCGC 2 cut(s) 2519, 3419
SspDI GGCGCC 1 cut(s) 1764
SspMI CTAG 9 cut(s) 693, 848, 1248, 2120, 2267, 2564, 2873, 3221, 3317
SstI GAGCTC 2 cut(s) 1207, 2781
StuI AGGCCT 2 cut(s) 600, 2597
StyD4I CCNGG 6 cut(s) 259, 260, 909, 1655, 1893, 3258
StyI CCWWGG 6 cut(s) 222, 1644, 1665, 2436, 3012, 3509
TaiI ACGT 2 cut(s) 498, 2063
TaqI TCGA 6 cut(s) 875, 894, 2064, 2143, 2775, 3083
TatI WGTACW 2 cut(s) 1574, 1840
TauI GCSGC 1 cut(s) 2522
TscAI CASTG 6 cut(s) 126, 1609, 2131, 2262, 2623, 2680
TseFI GTSAC 2 cut(s) 729, 2156
Tsp45I GTSAC 2 cut(s) 729, 2156
TspGWI ACGGA 1 cut(s) 3041
TspMI CCCGGG 1 cut(s) 260
TspRI CASTG 6 cut(s) 126, 1609, 2131, 2262, 2623, 2680
Vha464I CTTAAG 2 cut(s) 818, 2828
VneI GTGCAC 2 cut(s) 615, 3276
VpaK11BI GGWCC 3 cut(s) 1462, 2176, 2444
VspI ATTAAT 1 cut(s) 1851
XagI CCTNNNNNAGG 1 cut(s) 3263
XapI RAATTY 4 cut(s) 625, 666, 3079, 3131
XceI RCATGY 6 cut(s) 169, 566, 737, 944, 3008, 3345
XcmI CCANNNNNNNNNTGG 2 cut(s) 1169, 1663
XmaI CCCGGG 1 cut(s) 260
XmiI GTMKAC 3 cut(s) 875, 1661, 1884
XmnI GAANNNNTTC 1 cut(s) 1005
XspI CTAG 9 cut(s) 693, 848, 1248, 2120, 2267, 2564, 2873, 3221, 3317
ZrmI AGTACT 1 cut(s) 1576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.