Rroxscaffold_1G00030060

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
39373250 .. 39385867
12618 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00030060.1

Sequence Viewer

Length: 855 bp
ATGACTCCCTTTGTACAACTTTGGGGGAGACCATGGAATTTGCTAGACATACTCACAGCGGCTACTTTTCTAGGTCTCCATAGCCTCTGTTTGTTTGCTCCGTTTCATTTTACATGGGCTGCCTTTTGGGTGGCCGCCGCACTCTACATTCTCACCGGTTTGGGAATCACTCTGGGTTTCCATAGACACCTTGCGCACAAGAGTTTACGGCTTCCCAAATGGCTCGAGTACTTGTTTGCCTATTTTGGGGTTCTAGCACTTCAGGGAAGTCCGATAGAATGGGTGAGCACACACCGATACCATCACCAGTTTACAGACACAGAGAAAGATCCTCACAGCCCCTTGAAGGGTTTCTGGTTTAGTCATATGGGTTGGATCCTTGATAGCACTTCTCGGTTTCGAAAATATGGAGGACTGAAGAACGTTGAGGATATGAAAAAGCAGTGGTTCTACAGATTTCTTCATCGTACATACCTTGTACACATATTTGTTCTTGGAGCTTTGCTCTATGCCCTAGGTGGACTACCCTTCTTTATCTGGGGAATGGGAGTGAGGATGGTATATGTTTTCCACACCACTTTGCTAGTAAACTCGGCCGGTCACATCTGGGGAAAACAAGTATGGAACACCGGCGACCTATCAAAAAACAATTGGTTGTTGGGATGGATCGCACTTGGAGAAGGGTGGCACAACAACCATCATGCATTTGAATACTCAGCTCGACAAGGTCTGGAATGGTGGCAAGTCGACTTGACTTGGTATGTAATCAGAGCTCTTCAAGCAATTGGGTTGGCAACTGACGTCAAAGTTCCCACTGAATCTCAGATGGGTCGCAAAGCCCTCAAGAAATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

284

Amino Acids

33.1

Weight (kDa)

9.66

Isoelectric Point (pI)

33.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_desaturase PF00487 38 - 258 1.6e-20 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 804
Acc16I TGCGCA 1 cut(s) 195
AccI GTMKAC 1 cut(s) 747
AciI CCGC 3 cut(s) 59, 135, 138
AclI AACGTT 1 cut(s) 423
AclWI GGATC 4 cut(s) 323, 370, 383, 674
AcoI YGGCCR 2 cut(s) 132, 594
AcsI RAATTY 1 cut(s) 37
AcuI CTGAAG 2 cut(s) 245, 437
AcyI GRCGYC 1 cut(s) 801
AfaI GTAC 4 cut(s) 15, 230, 469, 480
AfiI CCNNNNNNNGG 3 cut(s) 246, 346, 347
AgeI ACCGGT 1 cut(s) 155
AgsI TTSAA 3 cut(s) 346, 710, 779
AluBI AGCT 3 cut(s) 500, 719, 773
AluI AGCT 3 cut(s) 500, 719, 773
Alw21I GWGCWC 2 cut(s) 290, 775
Alw26I GTCTC 2 cut(s) 22, 80
AlwI GGATC 4 cut(s) 323, 370, 383, 674
Ama87I CYCGRG 1 cut(s) 224
AoxI GGCC 2 cut(s) 132, 594
ApeKI GCWGC 1 cut(s) 119
ApoI RAATTY 1 cut(s) 37
AsiGI ACCGGT 1 cut(s) 155
Asp700I GAANNNNTTC 1 cut(s) 350
AspA2I CCTAGG 1 cut(s) 514
AspLEI GCGC 1 cut(s) 196
AsuHPI GGTGA 3 cut(s) 145, 295, 296
AsuII TTCGAA 1 cut(s) 400
AvaI CYCGRG 1 cut(s) 224
AvrII CCTAGG 1 cut(s) 514
BamHI GGATCC 1 cut(s) 375
BanII GRGCYC 1 cut(s) 775
Bbv12I GWGCWC 2 cut(s) 290, 775
BbvI GCAGC 1 cut(s) 106
BccI CCATC 5 cut(s) 309, 550, 657, 705, 820
BceAI ACGGC 1 cut(s) 224
BcoDI GTCTC 2 cut(s) 22, 80
BfaI CTAG 5 cut(s) 44, 71, 254, 515, 584
BfmI CTRYAG 1 cut(s) 451
BisI GCNGC 4 cut(s) 60, 120, 135, 138
BlnI CCTAGG 1 cut(s) 514
BlsI GCNGC 4 cut(s) 61, 121, 136, 139
BmcAI AGTACT 1 cut(s) 230
BmeT110I CYCGRG 1 cut(s) 224
BmiI GGNNCC 1 cut(s) 377
BplI GAGNNNNNCTC 2 cut(s) 489, 521
Bpu14I TTCGAA 1 cut(s) 400
BpuEI CTTGAG 1 cut(s) 827
BsaHI GRCGYC 1 cut(s) 801
BsaI GGTCTC 2 cut(s) 22, 80
BsaJI CCNNGG 2 cut(s) 32, 514
BsaWI WCCGGW 1 cut(s) 155
Bsc4I CCNNNNNNNGG 3 cut(s) 246, 346, 347
Bse118I RCCGGY 3 cut(s) 155, 596, 629
Bse1I ACTGG 1 cut(s) 307
BseDI CCNNGG 2 cut(s) 32, 514
BseGI GGATG 2 cut(s) 561, 668
BseLI CCNNNNNNNGG 3 cut(s) 246, 346, 347
BseMII CTCAG 2 cut(s) 729, 836
BseNI ACTGG 1 cut(s) 307
BseX3I CGGCCG 1 cut(s) 594
BseXI GCAGC 1 cut(s) 106
Bsh1285I CGRYCG 1 cut(s) 597
BshFI GGCC 2 cut(s) 134, 596
BshTI ACCGGT 1 cut(s) 155
BsiEI CGRYCG 1 cut(s) 597
BsiHKAI GWGCWC 2 cut(s) 290, 775
BsiHKCI CYCGRG 1 cut(s) 224
BsiSI CCGG 3 cut(s) 156, 597, 630
BslI CCNNNNNNNGG 3 cut(s) 246, 346, 347
BsmAI GTCTC 2 cut(s) 22, 80
BsnI GGCC 2 cut(s) 134, 596
Bso31I GGTCTC 2 cut(s) 22, 80
BsoBI CYCGRG 1 cut(s) 224
Bsp119I TTCGAA 1 cut(s) 400
Bsp1286I GDGCHC 2 cut(s) 290, 775
Bsp1407I TGTACA 2 cut(s) 13, 478
Bsp143I GATC 3 cut(s) 328, 375, 666
Bsp19I CCATGG 1 cut(s) 32
BspACI CCGC 3 cut(s) 59, 135, 138
BspANI GGCC 2 cut(s) 134, 596
BspCNI CTCAG 2 cut(s) 728, 835
BspLI GGNNCC 1 cut(s) 377
BspPI GGATC 4 cut(s) 323, 370, 383, 674
BspQI GCTCTTC 1 cut(s) 780
BspT104I TTCGAA 1 cut(s) 400
BspTNI GGTCTC 2 cut(s) 22, 80
BsrFI RCCGGY 3 cut(s) 155, 596, 629
BsrGI TGTACA 2 cut(s) 13, 478
BsrI ACTGG 1 cut(s) 307
BssAI RCCGGY 3 cut(s) 155, 596, 629
BssECI CCNNGG 2 cut(s) 32, 514
BssMI GATC 3 cut(s) 328, 375, 666
BssNI GRCGYC 1 cut(s) 801
BssT1I CCWWGG 2 cut(s) 32, 514
Bst6I CTCTTC 1 cut(s) 780
BstACI GRCGYC 1 cut(s) 801
BstAUI TGTACA 2 cut(s) 13, 478
BstBI TTCGAA 1 cut(s) 400
BstDEI CTNAG 2 cut(s) 715, 822
BstDSI CCRYGG 1 cut(s) 32
BstF5I GGATG 2 cut(s) 561, 668
BstHHI GCGC 1 cut(s) 196
BstKTI GATC 3 cut(s) 331, 378, 669
BstMAI GTCTC 2 cut(s) 22, 80
BstMBI GATC 3 cut(s) 328, 375, 666
BstMCI CGRYCG 1 cut(s) 597
BstMWI GCNNNNNNNGC 1 cut(s) 779
BstSFI CTRYAG 1 cut(s) 451
BstV1I GCAGC 1 cut(s) 106
BstX2I RGATCY 2 cut(s) 328, 375
BstYI RGATCY 2 cut(s) 328, 375
BstZI CGGCCG 1 cut(s) 594
BsuRI GGCC 2 cut(s) 134, 596
BtgI CCRYGG 1 cut(s) 32
BtsCI GGATG 2 cut(s) 561, 668
BtsI GCAGTG 1 cut(s) 449
BtsIMutI CAGTG 2 cut(s) 449, 813
CfoI GCGC 1 cut(s) 196
Cfr10I RCCGGY 3 cut(s) 155, 596, 629
Csp6I GTAC 4 cut(s) 14, 229, 468, 479
CspAI ACCGGT 1 cut(s) 155
CviAII CATG 3 cut(s) 33, 114, 701
CviQI GTAC 4 cut(s) 14, 229, 468, 479
DdeI CTNAG 2 cut(s) 715, 822
DpnI GATC 3 cut(s) 330, 377, 668
DpnII GATC 3 cut(s) 328, 375, 666
EaeI YGGCCR 2 cut(s) 132, 594
EagI CGGCCG 1 cut(s) 594
Eam1104I CTCTTC 1 cut(s) 780
EarI CTCTTC 1 cut(s) 780
Ecl136II GAGCTC 1 cut(s) 773
EclXI CGGCCG 1 cut(s) 594
Eco130I CCWWGG 2 cut(s) 32, 514
Eco24I GRGCYC 1 cut(s) 775
Eco31I GGTCTC 2 cut(s) 22, 80
Eco52I CGGCCG 1 cut(s) 594
Eco53kI GAGCTC 1 cut(s) 773
Eco57I CTGAAG 2 cut(s) 245, 437
Eco88I CYCGRG 1 cut(s) 224
EcoICRI GAGCTC 1 cut(s) 773
EcoT14I CCWWGG 2 cut(s) 32, 514
EcoT22I ATGCAT 1 cut(s) 706
EcoT38I GRGCYC 1 cut(s) 775
ErhI CCWWGG 2 cut(s) 32, 514
FaeI CATG 3 cut(s) 36, 117, 704
FatI CATG 3 cut(s) 32, 113, 700
FauNDI CATATG 1 cut(s) 366
FblI GTMKAC 1 cut(s) 747
Fnu4HI GCNGC 4 cut(s) 60, 120, 135, 138
FokI GGATG 2 cut(s) 568, 675
FriOI GRGCYC 1 cut(s) 775
Fsp4HI GCNGC 4 cut(s) 60, 120, 135, 138
FspBI CTAG 5 cut(s) 44, 71, 254, 515, 584
FspI TGCGCA 1 cut(s) 195
GlaI GCGC 1 cut(s) 195
GluI GCNGC 4 cut(s) 60, 120, 135, 138
HaeIII GGCC 2 cut(s) 134, 596
HapII CCGG 3 cut(s) 156, 597, 630
HhaI GCGC 1 cut(s) 196
Hin1I GRCGYC 1 cut(s) 801
Hin1II CATG 3 cut(s) 36, 117, 704
Hin6I GCGC 1 cut(s) 194
HinP1I GCGC 1 cut(s) 194
HincII GTYRAC 1 cut(s) 748
HindII GTYRAC 1 cut(s) 748
HinfI GANTC 3 cut(s) 4, 165, 818
HpaII CCGG 3 cut(s) 156, 597, 630
HphI GGTGA 3 cut(s) 145, 295, 296
Hpy166II GTNNAC 6 cut(s) 206, 312, 481, 521, 589, 748
Hpy188I TCNGA 3 cut(s) 273, 770, 825
Hpy188III TCNNGA 2 cut(s) 731, 844
Hpy8I GTNNAC 6 cut(s) 206, 312, 481, 521, 589, 748
HpyAV CCTTC 3 cut(s) 340, 538, 674
HpyCH4IV ACGT 2 cut(s) 423, 801
HpyCH4V TGCA 1 cut(s) 704
HpyF10VI GCNNNNNNNGC 1 cut(s) 779
HpyF3I CTNAG 2 cut(s) 715, 822
HpySE526I ACGT 2 cut(s) 423, 801
Hsp92I GRCGYC 1 cut(s) 801
Hsp92II CATG 3 cut(s) 36, 117, 704
HspAI GCGC 1 cut(s) 194
Kzo9I GATC 3 cut(s) 328, 375, 666
LguI GCTCTTC 1 cut(s) 780
LmnI GCTCC 2 cut(s) 103, 497
Lsp1109I GCAGC 1 cut(s) 106
MaeI CTAG 5 cut(s) 44, 71, 254, 515, 584
MaeII ACGT 2 cut(s) 423, 801
MaeIII GTNAC 1 cut(s) 599
MalI GATC 3 cut(s) 330, 377, 668
MboI GATC 3 cut(s) 328, 375, 666
MboII GAAGA 3 cut(s) 430, 452, 767
MfeI CAATTG 2 cut(s) 649, 783
MflI RGATCY 2 cut(s) 328, 375
MhlI GDGCHC 2 cut(s) 290, 775
MluCI AATT 3 cut(s) 37, 649, 783
MmeI TCCRAC 1 cut(s) 353
MnlI CCTC 6 cut(s) 95, 342, 404, 421, 546, 851
Mph1103I ATGCAT 1 cut(s) 706
MroXI GAANNNNTTC 1 cut(s) 350
MspA1I CMGCKG 1 cut(s) 59
MspI CCGG 3 cut(s) 156, 597, 630
MunI CAATTG 2 cut(s) 649, 783
MwoI GCNNNNNNNGC 1 cut(s) 779
NcoI CCATGG 1 cut(s) 32
NdeI CATATG 1 cut(s) 366
NdeII GATC 3 cut(s) 328, 375, 666
NlaIII CATG 3 cut(s) 36, 117, 704
NlaIV GGNNCC 1 cut(s) 377
NmeAIII GCCGAG 1 cut(s) 572
NmuCI GTSAC 1 cut(s) 599
NsbI TGCGCA 1 cut(s) 195
NsiI ATGCAT 1 cut(s) 706
NspV TTCGAA 1 cut(s) 400
PaeR7I CTCGAG 1 cut(s) 224
PciSI GCTCTTC 1 cut(s) 780
PdmI GAANNNNTTC 1 cut(s) 350
PfeI GAWTC 2 cut(s) 165, 818
PflFI GACNNNGTC 1 cut(s) 726
PinAI ACCGGT 1 cut(s) 155
PkrI GCNGC 4 cut(s) 61, 121, 136, 139
Psp124BI GAGCTC 1 cut(s) 775
Psp1406I AACGTT 1 cut(s) 423
PspN4I GGNNCC 1 cut(s) 377
PspXI VCTCGAGB 1 cut(s) 224
PsuI RGATCY 2 cut(s) 328, 375
PsyI GACNNNGTC 1 cut(s) 726
RsaI GTAC 4 cut(s) 15, 230, 469, 480
RsaNI GTAC 4 cut(s) 14, 229, 468, 479
SacI GAGCTC 1 cut(s) 775
SalI GTCGAC 1 cut(s) 746
SapI GCTCTTC 1 cut(s) 780
SatI GCNGC 4 cut(s) 60, 120, 135, 138
Sau3AI GATC 3 cut(s) 328, 375, 666
ScaI AGTACT 1 cut(s) 230
SduI GDGCHC 2 cut(s) 290, 775
SfcI CTRYAG 1 cut(s) 451
Sfr274I CTCGAG 1 cut(s) 224
SfuI TTCGAA 1 cut(s) 400
SgrAI CRCCGGYG 1 cut(s) 629
SlaI CTCGAG 1 cut(s) 224
SmlI CTYRAG 2 cut(s) 224, 842
SmoI CTYRAG 2 cut(s) 224, 842
Sse9I AATT 3 cut(s) 37, 649, 783
SsiI CCGC 3 cut(s) 59, 135, 138
SspI AATATT 1 cut(s) 851
SspMI CTAG 5 cut(s) 44, 71, 254, 515, 584
SstI GAGCTC 1 cut(s) 775
StyI CCWWGG 2 cut(s) 32, 514
TaiI ACGT 2 cut(s) 426, 804
TaqI TCGA 4 cut(s) 225, 400, 721, 747
TasI AATT 3 cut(s) 37, 649, 783
TatI WGTACW 3 cut(s) 13, 228, 478
TauI GCSGC 3 cut(s) 62, 137, 140
TfiI GAWTC 2 cut(s) 165, 818
TscAI CASTG 2 cut(s) 449, 820
TseFI GTSAC 1 cut(s) 599
TseI GCWGC 1 cut(s) 119
Tsp45I GTSAC 1 cut(s) 599
TspDTI ATGAA 3 cut(s) 95, 449, 452
TspGWI ACGGA 1 cut(s) 90
TspRI CASTG 2 cut(s) 449, 820
Tth111I GACNNNGTC 1 cut(s) 726
XapI RAATTY 1 cut(s) 37
XhoI CTCGAG 1 cut(s) 224
XmaJI CCTAGG 1 cut(s) 514
XmiI GTMKAC 1 cut(s) 747
XmnI GAANNNNTTC 1 cut(s) 350
XspI CTAG 5 cut(s) 44, 71, 254, 515, 584
ZraI GACGTC 1 cut(s) 802
ZrmI AGTACT 1 cut(s) 230
Zsp2I ATGCAT 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.