Rmu_sc0000195.1_g000039

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000195.1
OG0000059
Physical Location & Seq
Reverse (-)
125573 .. 128419
2847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000195.1_g000039.1.cds

Sequence Viewer

Length: 1092 bp
atggccggtcgccggaatccggtcaactttcctcagaatccggtcaccggattccggccaacttcgcctgaatatggtcaccggtcgccgcccgccggacttttaaagaaaaaagaaagagagaacctgcaggcagatcaagctgtactaaaaatgcttgattgggatcgttggctggtgaaatggcgagtacaatttcgggggagggaatggaacttcgtggacatagccactttcactagcctcgtcttcttgcacttcctttctctttttgcgccattttacttcacctggactgcgttttggctggccattgcgctctactttgtctcaggtgtcggtgtaaccctttcgttccataggaatctctcccacagaagctttaagcttcccagatggctcgagtacttctttgcctattgtggggttttatcacttcagaggagtccacttgattgggtgagcgtacacagatcccaccatcaatttacagacacagtgaaagaccctcatagcccagtgagaggattctggtttagtcatgttggttgggcactcgattaccgtggtcgaaatggaagttatgacgcacgactaaagaatgttggagatttgaaaagacaaccatactatatatttctccattatacataccctcttcattatgctgctctcggagttctattgtactttgttggaggaatgccctttttggtttggggaatgggagtaaggacggtgctttttctccatgctacatttggaataaactcaatttgccatacatggggaaaacaagtatgggaaactggtgatttatccagaaacaactggttgattggattgctggcacatggagaaggttggcataataatcaccatgcttttcagcactcagctcgacacggcttggaatggtggcaaattgatgttacttggtatgtcataagatttcttgaacttgtgggtttggcaacagaagtgaagcttccaactgagactcagaagaaacaaagagctttaagcaacaaaatgatccatgaggagaagcagcagcagcttgaaacaaaagtccaaaatggcaagctttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FA_desaturase

Protein Analysis

363

Amino Acids

42.6

Weight (kDa)

9.81

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 135
AciI CCGC 2 cut(s) 89, 93
AclWI GGATC 3 cut(s) 174, 468, 1030
AcoI YGGCCR 3 cut(s) 3, 56, 309
AcuI CTGAAG 1 cut(s) 422
AfaI GTAC 5 cut(s) 147, 192, 407, 468, 689
AfiI CCNNNNNNNGG 9 cut(s) 12, 19, 47, 54, 74, 95, 423, 524, 787
AgeI ACCGGT 1 cut(s) 81
AgsI TTSAA 3 cut(s) 616, 959, 1064
AjnI CCWGG 1 cut(s) 290
AluBI AGCT 8 cut(s) 143, 381, 388, 899, 988, 1019, 1060, 1087
AluI AGCT 8 cut(s) 143, 381, 388, 899, 988, 1019, 1060, 1087
Alw26I GTCTC 2 cut(s) 334, 992
AlwI GGATC 3 cut(s) 174, 468, 1030
Ama87I CYCGRG 1 cut(s) 401
AoxI GGCC 3 cut(s) 3, 56, 309
ApeKI GCWGC 4 cut(s) 668, 1051, 1054, 1057
AsiGI ACCGGT 1 cut(s) 81
AspLEI GCGC 2 cut(s) 277, 319
AsuHPI GGTGA 7 cut(s) 37, 71, 190, 280, 472, 824, 869
AvaI CYCGRG 1 cut(s) 401
BaeGI GKGCMC 1 cut(s) 556
BalI TGGCCA 1 cut(s) 311
BbsI GAAGAC 1 cut(s) 241
BbvI GCAGC 4 cut(s) 655, 1063, 1066, 1069
BccI CCATC 2 cut(s) 390, 489
BceAI ACGGC 1 cut(s) 922
BcgI CGANNNNNNTGC 2 cut(s) 881, 915
BciT130I CCWGG 1 cut(s) 292
BcoDI GTCTC 2 cut(s) 334, 992
BfaI CTAG 1 cut(s) 240
BfmI CTRYAG 1 cut(s) 128
BfuAI ACCTGC 1 cut(s) 135
BisI GCNGC 5 cut(s) 89, 669, 1052, 1055, 1058
BlsI GCNGC 5 cut(s) 90, 670, 1053, 1056, 1059
BmcAI AGTACT 1 cut(s) 407
Bme1390I CCNGG 1 cut(s) 292
BmeT110I CYCGRG 1 cut(s) 401
BmrFI CCNGG 1 cut(s) 292
BmrI ACTGGG 1 cut(s) 512
BmuI ACTGGG 1 cut(s) 512
BpiI GAAGAC 1 cut(s) 241
BsaBI GATNNNNATC 1 cut(s) 165
BsaJI CCNNGG 1 cut(s) 565
BsaWI WCCGGW 4 cut(s) 19, 40, 47, 81
Bsc4I CCNNNNNNNGG 9 cut(s) 12, 19, 47, 54, 74, 95, 423, 524, 787
Bse118I RCCGGY 2 cut(s) 5, 81
Bse1I ACTGG 3 cut(s) 518, 814, 836
Bse3DI GCAATG 1 cut(s) 312
Bse8I GATNNNNATC 1 cut(s) 165
BseBI CCWGG 1 cut(s) 292
BseDI CCNNGG 1 cut(s) 565
BseJI GATNNNNATC 1 cut(s) 165
BseLI CCNNNNNNNGG 9 cut(s) 12, 19, 47, 54, 74, 95, 423, 524, 787
BseMI GCAATG 1 cut(s) 312
BseMII CTCAG 5 cut(s) 47, 345, 909, 987, 1016
BseNI ACTGG 3 cut(s) 518, 814, 836
BseRI GAGGAG 2 cut(s) 457, 1058
BseSI GKGCMC 1 cut(s) 556
BseXI GCAGC 4 cut(s) 655, 1063, 1066, 1069
Bsh1285I CGRYCG 2 cut(s) 10, 86
BshFI GGCC 3 cut(s) 5, 58, 311
BshTI ACCGGT 1 cut(s) 81
BsiEI CGRYCG 2 cut(s) 10, 86
BsiHKCI CYCGRG 1 cut(s) 401
BsiSI CCGG 8 cut(s) 6, 13, 20, 41, 48, 55, 82, 96
BslI CCNNNNNNNGG 9 cut(s) 12, 19, 47, 54, 74, 95, 423, 524, 787
BsmAI GTCTC 2 cut(s) 334, 992
BsmI GAATGC 1 cut(s) 708
BsnI GGCC 3 cut(s) 5, 58, 311
BsoBI CYCGRG 1 cut(s) 401
Bsp1286I GDGCHC 1 cut(s) 556
Bsp143I GATC 4 cut(s) 136, 166, 473, 1035
BspACI CCGC 2 cut(s) 89, 93
BspANI GGCC 3 cut(s) 5, 58, 311
BspCNI CTCAG 5 cut(s) 46, 344, 908, 988, 1015
BspMAI CTGCAG 1 cut(s) 132
BspMI ACCTGC 1 cut(s) 135
BspPI GGATC 3 cut(s) 174, 468, 1030
BsrDI GCAATG 1 cut(s) 312
BsrFI RCCGGY 2 cut(s) 5, 81
BsrI ACTGG 3 cut(s) 518, 814, 836
BssAI RCCGGY 2 cut(s) 5, 81
BssECI CCNNGG 1 cut(s) 565
BssMI GATC 4 cut(s) 136, 166, 473, 1035
Bst2UI CCWGG 1 cut(s) 292
Bst4CI ACNGT 3 cut(s) 499, 566, 739
Bst6I CTCTTC 1 cut(s) 663
BstC8I GCNNGC 5 cut(s) 93, 132, 309, 849, 1085
BstDEI CTNAG 5 cut(s) 33, 331, 895, 996, 1002
BstDSI CCRYGG 1 cut(s) 565
BstEII GGTNACC 2 cut(s) 43, 77
BstHHI GCGC 2 cut(s) 277, 319
BstKTI GATC 4 cut(s) 139, 169, 476, 1038
BstMAI GTCTC 2 cut(s) 334, 992
BstMBI GATC 4 cut(s) 136, 166, 473, 1035
BstMCI CGRYCG 2 cut(s) 10, 86
BstMWI GCNNNNNNNGC 3 cut(s) 64, 140, 1057
BstNI CCWGG 1 cut(s) 292
BstPI GGTNACC 2 cut(s) 43, 77
BstSCI CCNGG 1 cut(s) 290
BstSFI CTRYAG 1 cut(s) 128
BstSLI GKGCMC 1 cut(s) 556
BstV1I GCAGC 4 cut(s) 655, 1063, 1066, 1069
BstV2I GAAGAC 1 cut(s) 241
BstX2I RGATCY 1 cut(s) 473
BstXI CCANNNNNNTGG 1 cut(s) 456
BstYI RGATCY 1 cut(s) 473
BsuRI GGCC 3 cut(s) 5, 58, 311
BtgI CCRYGG 1 cut(s) 565
BtsIMutI CAGTG 2 cut(s) 504, 525
BveI ACCTGC 1 cut(s) 135
Cac8I GCNNGC 5 cut(s) 93, 132, 309, 849, 1085
CfoI GCGC 2 cut(s) 277, 319
Cfr10I RCCGGY 2 cut(s) 5, 81
CseI GACGC 1 cut(s) 596
Csp6I GTAC 5 cut(s) 146, 191, 406, 467, 688
CspAI ACCGGT 1 cut(s) 81
CviAII CATG 6 cut(s) 542, 752, 786, 854, 881, 1040
CviQI GTAC 5 cut(s) 146, 191, 406, 467, 688
DdeI CTNAG 5 cut(s) 33, 331, 895, 996, 1002
DpnI GATC 4 cut(s) 138, 168, 475, 1037
DpnII GATC 4 cut(s) 136, 166, 473, 1035
DraI TTTAAA 1 cut(s) 105
EaeI YGGCCR 3 cut(s) 3, 56, 309
Eam1104I CTCTTC 1 cut(s) 663
EarI CTCTTC 1 cut(s) 663
Eco57I CTGAAG 1 cut(s) 422
Eco88I CYCGRG 1 cut(s) 401
Eco91I GGTNACC 2 cut(s) 43, 77
EcoO65I GGTNACC 2 cut(s) 43, 77
EcoRII CCWGG 1 cut(s) 290
FaeI CATG 6 cut(s) 545, 755, 789, 857, 884, 1043
FalI AAGNNNNNCTT 2 cut(s) 972, 1004
FatI CATG 6 cut(s) 541, 751, 785, 853, 880, 1039
FauI CCCGC 1 cut(s) 100
Fnu4HI GCNGC 5 cut(s) 89, 669, 1052, 1055, 1058
Fsp4HI GCNGC 5 cut(s) 89, 669, 1052, 1055, 1058
FspBI CTAG 1 cut(s) 240
GlaI GCGC 2 cut(s) 276, 318
GluI GCNGC 5 cut(s) 89, 669, 1052, 1055, 1058
HaeIII GGCC 3 cut(s) 5, 58, 311
HapII CCGG 8 cut(s) 6, 13, 20, 41, 48, 55, 82, 96
HgaI GACGC 1 cut(s) 596
HhaI GCGC 2 cut(s) 277, 319
Hin1II CATG 6 cut(s) 545, 755, 789, 857, 884, 1043
Hin6I GCGC 2 cut(s) 275, 317
HinP1I GCGC 2 cut(s) 275, 317
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HindIII AAGCTT 4 cut(s) 379, 386, 986, 1085
HinfI GANTC 7 cut(s) 16, 37, 51, 364, 445, 528, 1000
HpaII CCGG 8 cut(s) 6, 13, 20, 41, 48, 55, 82, 96
HphI GGTGA 7 cut(s) 37, 71, 190, 280, 472, 824, 869
Hpy166II GTNNAC 4 cut(s) 25, 223, 449, 469
Hpy188I TCNGA 4 cut(s) 36, 441, 677, 1005
Hpy188III TCNNGA 2 cut(s) 822, 956
Hpy8I GTNNAC 4 cut(s) 25, 223, 449, 469
HpyAV CCTTC 1 cut(s) 854
HpyCH4III ACNGT 3 cut(s) 499, 566, 739
HpyCH4V TGCA 2 cut(s) 130, 256
HpyF10VI GCNNNNNNNGC 3 cut(s) 64, 140, 1057
HpyF3I CTNAG 5 cut(s) 33, 331, 895, 996, 1002
Hsp92II CATG 6 cut(s) 545, 755, 789, 857, 884, 1043
HspAI GCGC 2 cut(s) 275, 317
Kzo9I GATC 4 cut(s) 136, 166, 473, 1035
Lsp1109I GCAGC 4 cut(s) 655, 1063, 1066, 1069
MaeI CTAG 1 cut(s) 240
MaeIII GTNAC 4 cut(s) 43, 77, 343, 931
MalI GATC 4 cut(s) 138, 168, 475, 1037
MboI GATC 4 cut(s) 136, 166, 473, 1035
MboII GAAGA 3 cut(s) 241, 650, 1018
MflI RGATCY 1 cut(s) 473
MhlI GDGCHC 1 cut(s) 556
MlsI TGGCCA 1 cut(s) 311
MluCI AATT 4 cut(s) 194, 485, 774, 924
MluNI TGGCCA 1 cut(s) 311
MlyI GAGTC 2 cut(s) 454, 994
MmeI TCCRAC 3 cut(s) 586, 676, 1016
MnlI CCTC 9 cut(s) 42, 198, 254, 435, 518, 519, 666, 692, 1036
Mox20I TGGCCA 1 cut(s) 311
MscI TGGCCA 1 cut(s) 311
MseI TTAA 3 cut(s) 104, 384, 1022
Msp20I TGGCCA 1 cut(s) 311
MspI CCGG 8 cut(s) 6, 13, 20, 41, 48, 55, 82, 96
MspR9I CCNGG 1 cut(s) 292
Mva1269I GAATGC 1 cut(s) 708
MvaI CCWGG 1 cut(s) 292
MwoI GCNNNNNNNGC 3 cut(s) 64, 140, 1057
NdeII GATC 4 cut(s) 136, 166, 473, 1035
NlaIII CATG 6 cut(s) 545, 755, 789, 857, 884, 1043
NmuCI GTSAC 2 cut(s) 43, 77
PaeR7I CTCGAG 1 cut(s) 401
PctI GAATGC 1 cut(s) 708
PfeI GAWTC 5 cut(s) 16, 37, 51, 364, 528
PinAI ACCGGT 1 cut(s) 81
PkrI GCNGC 5 cut(s) 90, 670, 1053, 1056, 1059
PleI GAGTC 2 cut(s) 453, 994
PpsI GAGTC 2 cut(s) 453, 994
Psp6I CCWGG 1 cut(s) 290
PspEI GGTNACC 2 cut(s) 43, 77
PspGI CCWGG 1 cut(s) 290
PspXI VCTCGAGB 1 cut(s) 401
PstI CTGCAG 1 cut(s) 132
PsuI RGATCY 1 cut(s) 473
RsaI GTAC 5 cut(s) 147, 192, 407, 468, 689
RsaNI GTAC 5 cut(s) 146, 191, 406, 467, 688
SaqAI TTAA 3 cut(s) 104, 384, 1022
SatI GCNGC 5 cut(s) 89, 669, 1052, 1055, 1058
Sau3AI GATC 4 cut(s) 136, 166, 473, 1035
SbfI CCTGCAGG 1 cut(s) 132
ScaI AGTACT 1 cut(s) 407
SchI GAGTC 2 cut(s) 454, 994
ScrFI CCNGG 1 cut(s) 292
SdaI CCTGCAGG 1 cut(s) 132
SduI GDGCHC 1 cut(s) 556
SfcI CTRYAG 1 cut(s) 128
Sfr274I CTCGAG 1 cut(s) 401
SlaI CTCGAG 1 cut(s) 401
SmlI CTYRAG 1 cut(s) 401
SmoI CTYRAG 1 cut(s) 401
Sse8387I CCTGCAGG 1 cut(s) 132
Sse9I AATT 4 cut(s) 194, 485, 774, 924
SsiI CCGC 2 cut(s) 89, 93
SspMI CTAG 1 cut(s) 240
StyD4I CCNGG 1 cut(s) 290
TaaI ACNGT 3 cut(s) 499, 566, 739
TaqI TCGA 4 cut(s) 402, 558, 571, 901
TasI AATT 4 cut(s) 194, 485, 774, 924
TatI WGTACW 4 cut(s) 145, 190, 405, 687
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 5 cut(s) 16, 37, 51, 364, 528
Tru1I TTAA 3 cut(s) 104, 384, 1022
Tru9I TTAA 3 cut(s) 104, 384, 1022
TscAI CASTG 2 cut(s) 504, 525
TseFI GTSAC 2 cut(s) 43, 77
TseI GCWGC 4 cut(s) 668, 1051, 1054, 1057
Tsp45I GTSAC 2 cut(s) 43, 77
TspDTI ATGAA 1 cut(s) 650
TspRI CASTG 2 cut(s) 504, 525
XcmI CCANNNNNNNNNTGG 1 cut(s) 758
XhoI CTCGAG 1 cut(s) 401
XspI CTAG 1 cut(s) 240
ZrmI AGTACT 1 cut(s) 407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.