Rorug02G0475900

Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
60707084 .. 60714603
7520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0475900.1

Sequence Viewer

Length: 2565 bp
ATGGAGAAACATTTAGAAGATATTAAAATGGGTCGTTCTGAAGGGGCCTTTAAGATTCCATCGGTCAATATTCCTAGAAAATTAGAGAATACTGCATGGGGAATCCTTCGTACAACTGAGGCATATCATGCATCAAGTGATACTAGCTTGTTTTCCAGCTCATTGCCCGTCCTTCCACATGAAAAGTTGAATTTTGCCGATTCGGAGCATTTGCGTCAGTCTGTTGATGATAGCTTGCCCAATCTAGTTAAAGTTGACCAGGACATTGAGATTAAAAATCCACTTGAGAATGCTGAATCAAATTCGTTCAGAATTACACTTCCTGATGATGAAGACGAGCTGTTAGCTGGCTTAACAGATGATTTTGATCTAAGTCGGCTGCCTAGTCATCTGGAGGAGATGGAAGAGTATGATCTCTTTGGCAGTGGTGGCGGAATGGAATTGGATTTTGAATCGCAAGATAGCCTTGGTATTGGTTTGTCAAAGCTAAGCATATCTGATGGGGTTAGTCCAAATGGTATTGGTCATTATGCTCTTCCAAATGGAGCGGGAACTGTGGCTGGAGAACATCCTTATGGGGAGCATCCTTCAAGGACCTTGTTCGTTAGAAATATCAATAGTAATGTTGAGGATTCCGAATTGAGATCTCTATTTGAGCAATATGGAGATATCAGAACTTTATATACTGCGTGCAAGCATAGGGGATTTGTGATGATATCATACTATGATATCCGATCTGCTCGCACTGCAATGCGTGCATTACAGAACAAGCCCTTGAGACGAAGAAAACTTGACATTCATTTTTCAATTCCCAAGGATAACCCTTCAGAAAAGGATATCAACCAAGGAACTCTTGTGGTTTTCAATTTGGATGCATCAGTGTCAAATGATGACCTTCGACAGATATTTGGGGTTTATGGAGAAGTCAAGGAGATCCGAGAAACACCACACAAGAGACACCATAAATTCATAGAGTTTTATGACGTTAGAGCTGCAGAGGCAGCTTTAAGAGCACTAAATAGGAGCGACATAGCTGGGAAACGCATAAAGCTTGAACCCAGCCGCCCTGGTGGAGCTCGAAGAAACTTGATGCAGCAACTAAGTCAAGAGCTTGACCAAGATGAAACTCGGAGTTTCCGACATCAAGTGGGTTCACCAATGACCAACTCTCCTCCAGGTACCTGGGCACAAATTGGAAGCCCCATTGAACATAATCAGCTTGGTTTTAGTAAGTCCCCAGGTCTGGGAAGCCTGAGTCCTGTAGACAGCAACAATTTACCTGGGTTAGCTTCAATTCTTCCAACTCATGTTCCTAACTCCCCAAAGATTGCACCTATTGGTAAAGACCAAGGAAGGTTGAACCATACAAGTCAGATATTTAGTAACTCCGTTTCAACGCCAGGAGCAGCCTATCAGCATTCTCATTCCTTTCCTGAGCAGAAATTAAGCACTAGTCCAGGTCCCATCTCATATGGTGAGTCAAATTCAAATTCATCAGGTATTGGAACTTTGTCAGGTCCTCAGTTTCTCTGGGGAAGCCCAACTCCTTATTCCGAGCCCAAGTCTTCTGCCTGGCCAACATCATCTGTGGGACATCCGTTTTCATCTGGTGGACAGGGACAGGGTTTTCCATTCACTAGCCGGCAGAGCTCTTTCCTCAGTTCACATAACCATCATGTGGGATCTGCTCCATCTGGTGTTCCTCTGGATAGGCATTTTGGCTACTTCCCCGAATCACCTGAAACATCCTTCATGAATCCAATGTTTGGGGGCATGGGTTTAAGCCGCAACAATAGTAATTACATGATGAACATGGGTGGTCGTGCAACTATGAATGCTGGTGTTGGTCTTCCAGGAAACATTAGTGAAAATGGCTCTCCTAGTTTTAGAATGATGTCAATGCCAAAGCATAGTACTGTGTACCTTGGGAATGGTTCTTACACTGGACCTGCAGCAACCATCAGTGAGCTATTTGCTGATCGTGGTAGGAGTCGGCGGGTTGAGAATAGTGGGAATCAAGTAGATAGCAAAAAGCAGTATCAACTTGATTTAGATAAAATTCTCCGCGGGGAAGACAGTAGGACTACTTTAATGATCAAAAACATCCCCAATAAGTACACTTCTAAAATGCTGCTGGCTGCTATAGATGAAAATCACCGGGGTACATACGATTTCCTGTACTTGCCAATCGACTTTAAGAATAAGTGCAATGTGGGTTATGCCTTCATCAATATGGTGTCTCCTTCCCACATTATAGCCTTTTATGAGGCATTTAATGGCAAGAAGTGGGAGAAGTTTAACAGTGAAAAGGTTGCTTCACTGGCTTATGCACGTATCCAGGGTAAAGCTGCCCTTGTGACTCATTTTCAGAATTCAAGCCTTATGAATGAGGACAAGCGTTGCCGACCTATCCTCTTCCACTCGGAGGGCCAAGAGACTGGTGACGAGGAAACTTTCCTCTCCAGAAATTTGAACATATGCATACGGCAGCCAGATGGCTCTTATTTGGGTGATTCATTGGACAGCCCAAAGGGGAATCTGGATGAGAATCCAGAGAACGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

854

Amino Acids

94.31

Weight (kDa)

6.05

Isoelectric Point (pI)

54.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 200 - 264 1.4e-10 RNA recognition motif
RRM_5 PF13893 282 - 375 7.6e-07 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1 PF00076 285 - 350 1.3e-10 RNA recognition motif
RRM_2 PF04059 694 - 790 6.2e-55 RNA recognition motif 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000059)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06080 AT1G06080 AT2G31360 AT2G31360
fragaria_vesca FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_1g04480 FvH4_3g00350 FvH4_3g28040 FvH4_3g28040 FvH4_3g28040 FvH4_3g28050 FvH4_5g34260 FvH4_6g42131 FvH4_6g42140 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42171 FvH4_6g42311 FvH4_6g42312 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640 FvH4_6g43640
malus_domestica MD00G1098700.v1.1 MD00G1139800.v1.1 MD00G1174400.v1.1 MD02G1133600.v1.1 MD02G1271200.v1.1 MD09G1114000.v1.1 MD09G1114100.v1.1 MD09G1114200.v1.1 MD11G1194300.v1.1 MD15G1438800.v1.1 MD17G1105800.v1.1 MD17G1105900.v1.1
prunus_persica Prupe.3G210300_v2.0.a1 Prupe.3G210300_v2.0.a1 Prupe.3G210400_v2.0.a1 Prupe.3G210500_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.3G210600_v2.0.a1 Prupe.4G228700_v2.0.a1 Prupe.4G228800_v2.0.a1 Prupe.4G228900_v2.0.a1 Prupe.4G229000_v2.0.a1 Prupe.4G229300_v2.0.a1 Prupe.4G229500_v2.0.a1 Prupe.4G229600_v2.0.a1 Prupe.4G259100_v2.0.a1 Prupe.4G259400_v2.0.a1 Prupe.4G259500_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259600_v2.0.a1 Prupe.4G259800_v2.0.a1 Prupe.4G259900_v2.0.a1
pyrus_communis pycom03g12440 pycom09g03830 pycom09g03840 pycom09g03850 pycom11g16300 pycom15g38680 pycom17g09850
rosa_chinensis RchiOBHm_Chr1g0337221 RchiOBHm_Chr1g0343481 RchiOBHm_Chr1g0343491 RchiOBHm_Chr1g0343531 RchiOBHm_Chr1g0343551 RchiOBHm_Chr1g0343711 RchiOBHm_Chr1g0343721 RchiOBHm_Chr1g0343731 RchiOBHm_Chr1g0360301 RchiOBHm_Chr2g0086981 RchiOBHm_Chr2g0142871 RchiOBHm_Chr2g0156531 RchiOBHm_Chr2g0157491 RchiOBHm_Chr2g0157791 RchiOBHm_Chr2g0158051 RchiOBHm_Chr2g0158061 RchiOBHm_Chr2g0158141 RchiOBHm_Chr2g0158151 RchiOBHm_Chr2g0158221 RchiOBHm_Chr2g0158251 RchiOBHm_Chr2g0159451 RchiOBHm_Chr4g0403611 RchiOBHm_Chr4g0412621 RchiOBHm_Chr4g0424961 RchiOBHm_Chr4g0425001 RchiOBHm_Chr4g0425091 RchiOBHm_Chr5g0012311 RchiOBHm_Chr5g0022121 RchiOBHm_Chr5g0050081 RchiOBHm_Chr5g0050721 RchiOBHm_Chr5g0050731 RchiOBHm_Chr5g0050761 RchiOBHm_Chr6g0252581 RchiOBHm_Chr7g0199141 RchiOBHm_Chr7g0216811 RchiOBHm_Chr7g0234331 RchiOBHm_Chr7g0234341 RchiOBHm_Chr7g0234371 RchiOBHm_Chr7g0234431 RchiOBHm_Chr7g0234681 RchiOBHm_Chr7g0234741
rosa_laevigata RLG00000001215 RLG00000001222 RLG00000001223 RLG00000001229 RLG00000003811 RLG00000007410 RLG00000015084 RLG00000017931 RLG00000020899 RLG00000020919 RLG00000020994 RLG00000021020 RLG00000021055 RLG00000021056 RLG00000021057 RLG00000021063 RLG00000021065 RLG00000021066 RLG00000021069 RLG00000021071 RLG00000021156 RLG00000024999 RLG00000025005 RLG00000028964 RLG00000029292 RLG00000032646 RLG00000034725 RLG00000034726 RLG00000034730
rosa_multiflora Rmu_co8371849.1_g000001 Rmu_co8422897.1_g000001 Rmu_sc0000195.1_g000039 Rmu_sc0000333.1_g000003 Rmu_sc0000419.1_g000030 Rmu_sc0000419.1_g000034 Rmu_sc0002016.1_g000040 Rmu_sc0002117.1_g000018 Rmu_sc0002117.1_g000023 Rmu_sc0002160.1_g000002 Rmu_sc0002204.1_g000008 Rmu_sc0002775.1_g000001 Rmu_sc0002775.1_g000013 Rmu_sc0002801.1_g000001 Rmu_sc0002801.1_g000013 Rmu_sc0004434.1_g000003 Rmu_sc0004864.1_g000019 Rmu_sc0006966.1_g000006 Rmu_sc0007763.1_g000002 Rmu_sc0007769.1_g000006 Rmu_sc0007769.1_g000013 Rmu_sc0008904.1_g000001 Rmu_sc0013250.1_g000001 Rmu_sc0013327.1_g000004 Rmu_sc0037251.1_g000001 Rmu_ssc0000217.1_g000013 Rmu_ssc0000420.1_g000014 Rmu_ssc0000420.1_g000016
rosa_roxburghii Rroxscaffold_1G00030000 Rroxscaffold_1G00030030 Rroxscaffold_1G00030060 Rroxscaffold_2G00090560 Rroxscaffold_2G00090580 Rroxscaffold_2G00091590 Rroxscaffold_2G00091630 Rroxscaffold_2G00091670 Rroxscaffold_2G00091700 Rroxscaffold_2G00091950 Rroxscaffold_2G00092160 Rroxscaffold_2G00132010 Rroxscaffold_3G00226740 Rroxscaffold_3G00226760 Rroxscaffold_5G00356990 Rroxscaffold_5G00367150 Rroxscaffold_5G00368290 Rroxscaffold_7G00212540
rosa_rugosa Rorug01G0132700.1 Rorug01G0132800.1 Rorug01G0132900.1 Rorug01G0133000.1 Rorug01G0133100.1 Rorug01G0133200.1 Rorug01G0167200 Rorug01G0471200 Rorug02G0461800 Rorug02G0463400 Rorug02G0463500 Rorug02G0463600 Rorug02G0463700 Rorug02G0463700 Rorug02G0463700 Rorug02G0465500 Rorug02G0465800 Rorug02G0465900.1 Rorug02G0466000 Rorug02G0466100 Rorug02G0466200 Rorug02G0466300 Rorug02G0466600 Rorug02G0475900 Rorug04G0200800 Rorug04G0201000 Rorug04G0201100 Rorug04G0384700 Rorug05G0000500 Rorug05G0257600 Rorug05G0257600 Rorug05G0263300 Rorug05G0263700 Rorug05G0537100 Rorug05G0579200 Rorug05G0579200 Rorug07G0155500 Rorug07G0163100 Rorug07G0283400 Rorug07G0284800 Rorug07G0285400
rosa_samantha Rh1AG184700 Rh1BG152200 Rh1DG184100 Rh2AG024000 Rh2AG525800 Rh2AG529100 Rh2AG531600 Rh2AG531800 Rh2AG532600 Rh2AG532700 Rh2AG542500 Rh2BG024600 Rh2BG540500 Rh2BG543000 Rh2BG546000 Rh2BG546100 Rh2BG546500 Rh2BG555700 Rh2CG024700 Rh2CG510500 Rh2CG513400 Rh2CG515800 Rh2CG515900 Rh2CG516300 Rh2CG516400 Rh2CG525100 Rh2CG525900 Rh2DG549000 Rh2DG551900 Rh2DG554300 Rh2DG554500 Rh2DG555100 Rh2DG564800 Rh2DG565100 Rh4AG174400 Rh4AG258000 Rh4BG263600 Rh4CG274800 Rh4DG170100 Rh4DG259200 Rh4DG259500 Rh5AG094500 Rh5AG159500 Rh5AG330300 Rh5AG335300 Rh5AG335400 Rh5AG335800 Rh5BG090700 Rh5BG159000 Rh5BG341000 Rh5BG344600 Rh5BG344800 Rh5BG345200 Rh5CG173200 Rh5CG372600 Rh5CG372700 Rh5CG373100 Rh5DG090200 Rh5DG159000 Rh5DG353800 Rh5DG357700 Rh5DG357900 Rh5DG358300 Rh6AG053400 Rh7AG176500 Rh7AG301900 Rh7AG439800 Rh7BG294700 Rh7BG412800 Rh7CG185600 Rh7CG320600 Rh7CG460400 Rh7CG460500 Rh7CG460900 Rh7CG461300 Rh7DG179500 Rh7DG303400 Rh7DG429500 Rh7DG429600
rosa_wichuraiana Rw0G019480 Rw1G012510 Rw1G015180 Rw2G001890 Rw2G043550 Rw2G043740 Rw2G043960 Rw2G043970 Rw2G044020 Rw2G044030 Rw2G044080 Rw2G044100 Rw2G044850 Rw2G044910 Rw4G014610 Rw4G022270 Rw4G022280 Rw4G022310 Rw5G008250 Rw5G014230 Rw5G031190 Rw5G031640 Rw5G031650 Rw5G031680 Rw6G004800 Rw7G015520 Rw7G025750 Rw7G036370 Rw7G036390 Rw7G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1957
Acc65I GGTACC 1 cut(s) 1178
AccB1I GGYRCC 1 cut(s) 1178
AccB7I CCANNNNNTGG 2 cut(s) 1678, 1766
AccBSI CCGCTC 1 cut(s) 548
AccI GTMKAC 1 cut(s) 1263
AccII CGCG 1 cut(s) 2067
AciI CCGC 7 cut(s) 432, 548, 1063, 1786, 1996, 2065, 2067
AclWI GGATC 2 cut(s) 928, 1690
AcoI YGGCCR 1 cut(s) 1574
AcsI RAATTY 8 cut(s) 190, 301, 965, 1483, 1489, 2058, 2371, 2467
AcuI CTGAAG 2 cut(s) 60, 810
AfaI GTAC 7 cut(s) 112, 1180, 1915, 1922, 2117, 2164, 2180
AfiI CCNNNNNNNGG 5 cut(s) 1243, 1244, 1678, 1766, 2425
AhlI ACTAGT 1 cut(s) 1451
AjuI GAANNNNNNNTTGG 2 cut(s) 1534, 1566
Alw21I GWGCWC 3 cut(s) 1015, 1078, 1652
Alw26I GTCTC 4 cut(s) 772, 949, 2244, 2429
AlwI GGATC 2 cut(s) 928, 1690
AoxI GGCC 3 cut(s) 45, 1574, 2428
ApoI RAATTY 8 cut(s) 190, 301, 965, 1483, 1489, 2058, 2371, 2467
Asp718I GGTACC 1 cut(s) 1178
AspS9I GGNCC 6 cut(s) 45, 594, 1460, 1517, 1946, 2428
AsuC2I CCSGG 1 cut(s) 2159
AsuHPI GGTGA 6 cut(s) 1146, 1487, 1728, 2147, 2453, 2522
AvaII GGWCC 4 cut(s) 594, 1460, 1517, 1946
BaeGI GKGCMC 1 cut(s) 1189
BalI TGGCCA 1 cut(s) 1576
BanI GGYRCC 1 cut(s) 1178
BanII GRGCYC 3 cut(s) 1078, 1560, 1652
BbsI GAAGAC 4 cut(s) 339, 1557, 1841, 2079
Bbv12I GWGCWC 3 cut(s) 1015, 1078, 1652
BccI CCATC 8 cut(s) 67, 394, 494, 1472, 1680, 1699, 1967, 2489
BceAI ACGGC 1 cut(s) 2501
BciVI GTATCC 1 cut(s) 2345
BclI TGATCA 1 cut(s) 2094
BcnI CCSGG 1 cut(s) 2159
BcoDI GTCTC 4 cut(s) 772, 949, 2244, 2429
BcuI ACTAGT 1 cut(s) 1451
BfaI CTAG 7 cut(s) 75, 144, 245, 384, 1452, 1638, 1881
BfmI CTRYAG 4 cut(s) 993, 1260, 1950, 2142
BfuAI ACCTGC 1 cut(s) 1957
BfuI GTATCC 1 cut(s) 2345
BglII AGATCT 1 cut(s) 644
BlpI GCTNAGC 1 cut(s) 488
BmcAI AGTACT 1 cut(s) 1915
Bme18I GGWCC 4 cut(s) 594, 1460, 1517, 1946
BmgT120I GGNCC 6 cut(s) 45, 594, 1460, 1517, 1946, 2428
BmiI GGNNCC 3 cut(s) 46, 1180, 1462
BmsI GCATC 5 cut(s) 140, 592, 862, 884, 1080
BpiI GAAGAC 4 cut(s) 339, 1557, 1841, 2079
BpmI CTGGAG 4 cut(s) 413, 582, 1158, 2446
Bpu10I CCTNAGC 1 cut(s) 1434
Bpu1102I GCTNAGC 1 cut(s) 488
BpuEI CTTGAG 2 cut(s) 305, 796
BpuMI CCSGG 1 cut(s) 2159
BsaAI YACGTR 1 cut(s) 2333
BsaBI GATNNNNATC 3 cut(s) 366, 2151, 2547
BsaXI ACNNNNNCTCC 2 cut(s) 1153, 1183
Bsc4I CCNNNNNNNGG 5 cut(s) 1243, 1244, 1678, 1766, 2425
Bse118I RCCGGY 1 cut(s) 1641
Bse1I ACTGG 3 cut(s) 1948, 2325, 2443
Bse3DI GCAATG 3 cut(s) 161, 756, 2215
Bse8I GATNNNNATC 3 cut(s) 366, 2151, 2547
BseGI GGATG 7 cut(s) 568, 583, 877, 1594, 1745, 2103, 2548
BseJI GATNNNNATC 3 cut(s) 366, 2151, 2547
BseLI CCNNNNNNNGG 5 cut(s) 1243, 1244, 1678, 1766, 2425
BseMI GCAATG 3 cut(s) 161, 756, 2215
BseMII CTCAG 5 cut(s) 108, 1244, 1425, 1535, 1672
BseNI ACTGG 3 cut(s) 1948, 2325, 2443
BseRI GAGGAG 2 cut(s) 410, 1161
BseSI GKGCMC 1 cut(s) 1189
BseYI CCCAGC 2 cut(s) 1034, 1058
Bsh1236I CGCG 1 cut(s) 2067
BshFI GGCC 3 cut(s) 47, 1576, 2430
BshNI GGYRCC 1 cut(s) 1178
BsiHKAI GWGCWC 3 cut(s) 1015, 1078, 1652
BsiSI CCGG 2 cut(s) 1642, 2158
BslFI GGGAC 4 cut(s) 1219, 1446, 1605, 1632
BslI CCNNNNNNNGG 5 cut(s) 1243, 1244, 1678, 1766, 2425
BsmAI GTCTC 4 cut(s) 772, 949, 2244, 2429
BsmBI CGTCTC 1 cut(s) 772
BsmFI GGGAC 4 cut(s) 1219, 1446, 1605, 1632
BsmI GAATGC 3 cut(s) 295, 1417, 1840
BsnI GGCC 3 cut(s) 47, 1576, 2430
Bsp1286I GDGCHC 5 cut(s) 1015, 1078, 1189, 1560, 1652
Bsp143I GATC 8 cut(s) 367, 412, 644, 734, 933, 1682, 1978, 2094
Bsp1720I GCTNAGC 1 cut(s) 488
BspACI CCGC 7 cut(s) 432, 548, 1063, 1786, 1996, 2065, 2067
BspANI GGCC 3 cut(s) 47, 1576, 2430
BspCNI CTCAG 5 cut(s) 109, 1245, 1426, 1534, 1671
BspFNI CGCG 1 cut(s) 2067
BspHI TCATGA 1 cut(s) 1752
BspLI GGNNCC 3 cut(s) 46, 1180, 1462
BspMAI CTGCAG 2 cut(s) 997, 1954
BspMI ACCTGC 1 cut(s) 1957
BspPI GGATC 2 cut(s) 928, 1690
BspQI GCTCTTC 1 cut(s) 540
BspT107I GGYRCC 1 cut(s) 1178
BsrBI CCGCTC 1 cut(s) 548
BsrDI GCAATG 3 cut(s) 161, 756, 2215
BsrFI RCCGGY 1 cut(s) 1641
BsrI ACTGG 3 cut(s) 1948, 2325, 2443
BssAI RCCGGY 1 cut(s) 1641
BssMI GATC 8 cut(s) 367, 412, 644, 734, 933, 1682, 1978, 2094
BssT1I CCWWGG 5 cut(s) 466, 813, 844, 1348, 1924
Bst4CI ACNGT 4 cut(s) 556, 1918, 2078, 2303
Bst6I CTCTTC 3 cut(s) 399, 540, 2420
BstAPI GCANNNNNTGC 2 cut(s) 128, 755
BstBAI YACGTR 1 cut(s) 2333
BstC8I GCNNGC 8 cut(s) 236, 349, 691, 695, 742, 756, 1643, 2136
BstDEI CTNAG 8 cut(s) 117, 371, 488, 1100, 1253, 1434, 1521, 1658
BstDSI CCRYGG 1 cut(s) 2065
BstF5I GGATG 7 cut(s) 568, 583, 877, 1594, 1745, 2103, 2548
BstFNI CGCG 1 cut(s) 2067
BstKTI GATC 8 cut(s) 370, 415, 647, 737, 936, 1685, 1981, 2097
BstMAI GTCTC 4 cut(s) 772, 949, 2244, 2429
BstMBI GATC 8 cut(s) 367, 412, 644, 734, 933, 1682, 1978, 2094
BstMWI GCNNNNNNNGC 9 cut(s) 128, 429, 746, 755, 998, 1001, 1010, 1647, 2321
BstSFI CTRYAG 4 cut(s) 993, 1260, 1950, 2142
BstSLI GKGCMC 1 cut(s) 1189
BstUI CGCG 1 cut(s) 2067
BstV2I GAAGAC 4 cut(s) 339, 1557, 1841, 2079
BstX2I RGATCY 3 cut(s) 644, 933, 1682
BstXI CCANNNNNNTGG 2 cut(s) 1182, 2438
BstYI RGATCY 3 cut(s) 644, 933, 1682
BsuI GTATCC 1 cut(s) 2345
BsuRI GGCC 3 cut(s) 47, 1576, 2430
BtgI CCRYGG 1 cut(s) 2065
BtsCI GGATG 7 cut(s) 568, 583, 877, 1594, 1745, 2103, 2548
BtsI GCAGTG 2 cut(s) 430, 744
BtsIMutI CAGTG 7 cut(s) 430, 744, 885, 1941, 1969, 2308, 2318
BveI ACCTGC 1 cut(s) 1957
Cac8I GCNNGC 8 cut(s) 236, 349, 691, 695, 742, 756, 1643, 2136
CciI TCATGA 1 cut(s) 1752
Cfr10I RCCGGY 1 cut(s) 1641
Cfr13I GGNCC 6 cut(s) 45, 594, 1460, 1517, 1946, 2428
Cfr42I CCGCGG 1 cut(s) 2068
CseI GACGC 1 cut(s) 203
Csp6I GTAC 7 cut(s) 111, 1179, 1914, 1921, 2116, 2163, 2179
CviAII CATG 9 cut(s) 96, 128, 179, 1307, 1676, 1753, 1774, 1804, 1813
CviQI GTAC 7 cut(s) 111, 1179, 1914, 1921, 2116, 2163, 2179
DdeI CTNAG 8 cut(s) 117, 371, 488, 1100, 1253, 1434, 1521, 1658
DpnI GATC 8 cut(s) 369, 414, 646, 736, 935, 1684, 1980, 2096
DpnII GATC 8 cut(s) 367, 412, 644, 734, 933, 1682, 1978, 2094
EaeI YGGCCR 1 cut(s) 1574
Eam1104I CTCTTC 3 cut(s) 399, 540, 2420
EarI CTCTTC 3 cut(s) 399, 540, 2420
EciI GGCGGA 1 cut(s) 447
Ecl136II GAGCTC 2 cut(s) 1076, 1650
Eco130I CCWWGG 5 cut(s) 466, 813, 844, 1348, 1924
Eco24I GRGCYC 3 cut(s) 1078, 1560, 1652
Eco32I GATATC 4 cut(s) 670, 717, 730, 838
Eco47I GGWCC 4 cut(s) 594, 1460, 1517, 1946
Eco53kI GAGCTC 2 cut(s) 1076, 1650
Eco57I CTGAAG 2 cut(s) 60, 810
EcoICRI GAGCTC 2 cut(s) 1076, 1650
EcoO109I RGGNCCY 4 cut(s) 45, 594, 1460, 1517
EcoRI GAATTC 1 cut(s) 2371
EcoRV GATATC 4 cut(s) 670, 717, 730, 838
EcoT14I CCWWGG 5 cut(s) 466, 813, 844, 1348, 1924
EcoT22I ATGCAT 3 cut(s) 133, 877, 2483
EcoT38I GRGCYC 3 cut(s) 1078, 1560, 1652
ErhI CCWWGG 5 cut(s) 466, 813, 844, 1348, 1924
Esp3I CGTCTC 1 cut(s) 772
FaeI CATG 9 cut(s) 99, 131, 182, 1310, 1679, 1756, 1777, 1807, 1816
FalI AAGNNNNNCTT 6 cut(s) 450, 482, 837, 869, 2337, 2369
FaqI GGGAC 4 cut(s) 1219, 1446, 1605, 1632
FatI CATG 9 cut(s) 95, 127, 178, 1306, 1675, 1752, 1773, 1803, 1812
FauI CCCGC 3 cut(s) 541, 1989, 2060
FauNDI CATATG 2 cut(s) 1471, 2477
FbaI TGATCA 1 cut(s) 2094
FblI GTMKAC 1 cut(s) 1263
FokI GGATG 7 cut(s) 555, 570, 884, 1581, 1732, 2090, 2555
FriOI GRGCYC 3 cut(s) 1078, 1560, 1652
FspBI CTAG 7 cut(s) 75, 144, 245, 384, 1452, 1638, 1881
GsaI CCCAGC 2 cut(s) 1038, 1062
GsuI CTGGAG 4 cut(s) 413, 582, 1158, 2446
HaeIII GGCC 3 cut(s) 47, 1576, 2430
HapII CCGG 2 cut(s) 1642, 2158
HgaI GACGC 1 cut(s) 203
Hin1II CATG 9 cut(s) 99, 131, 182, 1310, 1679, 1756, 1777, 1807, 1816
HincII GTYRAC 1 cut(s) 256
HindII GTYRAC 1 cut(s) 256
HindIII AAGCTT 1 cut(s) 1049
HpaII CCGG 2 cut(s) 1642, 2158
HphI GGTGA 6 cut(s) 1146, 1487, 1728, 2147, 2453, 2522
Hpy166II GTNNAC 7 cut(s) 256, 1154, 1264, 1613, 1664, 1921, 2118
Hpy188III TCNNGA 9 cut(s) 323, 392, 1106, 1433, 1706, 1753, 2463, 2540, 2552
Hpy8I GTNNAC 7 cut(s) 256, 1154, 1264, 1613, 1664, 1921, 2118
HpyCH4III ACNGT 4 cut(s) 556, 1918, 2078, 2303
HpyCH4IV ACGT 2 cut(s) 984, 2332
HpyF10VI GCNNNNNNNGC 9 cut(s) 128, 429, 746, 755, 998, 1001, 1010, 1647, 2321
HpyF3I CTNAG 8 cut(s) 117, 371, 488, 1100, 1253, 1434, 1521, 1658
HpySE526I ACGT 2 cut(s) 984, 2332
Hsp92II CATG 9 cut(s) 99, 131, 182, 1310, 1679, 1756, 1777, 1807, 1816
KpnI GGTACC 1 cut(s) 1182
KroI GCCGGC 1 cut(s) 1641
KroNI GCCGGC 1 cut(s) 1643
Ksp22I TGATCA 1 cut(s) 2094
KspI CCGCGG 1 cut(s) 2068
Kzo9I GATC 8 cut(s) 367, 412, 644, 734, 933, 1682, 1978, 2094
LguI GCTCTTC 1 cut(s) 540
LmnI GCTCC 7 cut(s) 205, 545, 580, 1023, 1073, 1403, 1693
LweI GCATC 5 cut(s) 140, 592, 862, 884, 1080
MaeI CTAG 7 cut(s) 75, 144, 245, 384, 1452, 1638, 1881
MaeII ACGT 2 cut(s) 984, 2332
MaeIII GTNAC 3 cut(s) 1382, 2356, 2441
MalI GATC 8 cut(s) 369, 414, 646, 736, 935, 1684, 1980, 2096
MbiI CCGCTC 1 cut(s) 548
MboI GATC 8 cut(s) 367, 412, 644, 734, 933, 1682, 1978, 2094
MflI RGATCY 3 cut(s) 644, 933, 1682
MhlI GDGCHC 5 cut(s) 1015, 1078, 1189, 1560, 1652
MlsI TGGCCA 1 cut(s) 1576
MluNI TGGCCA 1 cut(s) 1576
MlyI GAGTC 4 cut(s) 1264, 1487, 1999, 2353
MmeI TCCRAC 2 cut(s) 1162, 1325
Mox20I TGGCCA 1 cut(s) 1576
Mph1103I ATGCAT 3 cut(s) 133, 877, 2483
MroNI GCCGGC 1 cut(s) 1641
MscI TGGCCA 1 cut(s) 1576
MslI CAYNNNNRTG 3 cut(s) 573, 749, 2231
Msp20I TGGCCA 1 cut(s) 1576
MspA1I CMGCKG 1 cut(s) 2067
MspI CCGG 2 cut(s) 1642, 2158
Mva1269I GAATGC 3 cut(s) 295, 1417, 1840
MvnI CGCG 1 cut(s) 2067
MwoI GCNNNNNNNGC 9 cut(s) 128, 429, 746, 755, 998, 1001, 1010, 1647, 2321
NaeI GCCGGC 1 cut(s) 1643
NciI CCSGG 1 cut(s) 2159
NdeI CATATG 2 cut(s) 1471, 2477
NdeII GATC 8 cut(s) 367, 412, 644, 734, 933, 1682, 1978, 2094
NgoMIV GCCGGC 1 cut(s) 1641
NlaIII CATG 9 cut(s) 99, 131, 182, 1310, 1679, 1756, 1777, 1807, 1816
NlaIV GGNNCC 3 cut(s) 46, 1180, 1462
NmuCI GTSAC 2 cut(s) 2356, 2441
NsiI ATGCAT 3 cut(s) 133, 877, 2483
PagI TCATGA 1 cut(s) 1752
PciSI GCTCTTC 1 cut(s) 540
PcsI WCGNNNNNNNCGW 1 cut(s) 1135
PctI GAATGC 3 cut(s) 295, 1417, 1840
PdiI GCCGGC 1 cut(s) 1643
PflMI CCANNNNNTGG 2 cut(s) 1678, 1766
PfoI TCCNGGA 1 cut(s) 1852
PleI GAGTC 4 cut(s) 1263, 1486, 1998, 2353
PpsI GAGTC 4 cut(s) 1263, 1486, 1998, 2353
Ppu21I YACGTR 1 cut(s) 2333
PpuMI RGGWCCY 3 cut(s) 594, 1460, 1517
Psp124BI GAGCTC 2 cut(s) 1078, 1652
Psp5II RGGWCCY 3 cut(s) 594, 1460, 1517
PspFI CCCAGC 2 cut(s) 1034, 1058
PspN4I GGNNCC 3 cut(s) 46, 1180, 1462
PspPI GGNCC 6 cut(s) 45, 594, 1460, 1517, 1946, 2428
PspPPI RGGWCCY 3 cut(s) 594, 1460, 1517
PsrI GAACNNNNNNTAC 2 cut(s) 667, 699
PstI CTGCAG 2 cut(s) 997, 1954
PsuI RGATCY 3 cut(s) 644, 933, 1682
RsaI GTAC 7 cut(s) 112, 1180, 1915, 1922, 2117, 2164, 2180
RsaNI GTAC 7 cut(s) 111, 1179, 1914, 1921, 2116, 2163, 2179
RseI CAYNNNNRTG 3 cut(s) 573, 749, 2231
SacI GAGCTC 2 cut(s) 1078, 1652
SacII CCGCGG 1 cut(s) 2068
SapI GCTCTTC 1 cut(s) 540
Sau3AI GATC 8 cut(s) 367, 412, 644, 734, 933, 1682, 1978, 2094
Sau96I GGNCC 6 cut(s) 45, 594, 1460, 1517, 1946, 2428
ScaI AGTACT 1 cut(s) 1915
SchI GAGTC 4 cut(s) 1264, 1487, 1999, 2353
SduI GDGCHC 5 cut(s) 1015, 1078, 1189, 1560, 1652
SfaNI GCATC 5 cut(s) 140, 592, 862, 884, 1080
SfcI CTRYAG 4 cut(s) 993, 1260, 1950, 2142
Sfr303I CCGCGG 1 cut(s) 2068
SgrBI CCGCGG 1 cut(s) 2068
SinI GGWCC 4 cut(s) 594, 1460, 1517, 1946
SmiMI CAYNNNNRTG 3 cut(s) 573, 749, 2231
SmlI CTYRAG 2 cut(s) 284, 775
SmoI CTYRAG 2 cut(s) 284, 775
SpeI ACTAGT 1 cut(s) 1451
SsiI CCGC 7 cut(s) 432, 548, 1063, 1786, 1996, 2065, 2067
SspI AATATT 1 cut(s) 70
SspMI CTAG 7 cut(s) 75, 144, 245, 384, 1452, 1638, 1881
SstI GAGCTC 2 cut(s) 1078, 1652
StyI CCWWGG 5 cut(s) 466, 813, 844, 1348, 1924
TaaI ACNGT 4 cut(s) 556, 1918, 2078, 2303
TaiI ACGT 2 cut(s) 987, 2335
TaqI TCGA 3 cut(s) 898, 1078, 2190
TaqII GACCGA 1 cut(s) 52
TatI WGTACW 3 cut(s) 1913, 2115, 2178
TauI GCSGC 2 cut(s) 1065, 1788
TscAI CASTG 7 cut(s) 430, 751, 885, 1948, 1969, 2308, 2325
TseFI GTSAC 2 cut(s) 2356, 2441
Tsp45I GTSAC 2 cut(s) 2356, 2441
TspGWI ACGGA 2 cut(s) 1378, 1587
TspRI CASTG 7 cut(s) 430, 751, 885, 1948, 1969, 2308, 2325
Van91I CCANNNNNTGG 2 cut(s) 1678, 1766
VpaK11BI GGWCC 4 cut(s) 594, 1460, 1517, 1946
XapI RAATTY 8 cut(s) 190, 301, 965, 1483, 1489, 2058, 2371, 2467
XmiI GTMKAC 1 cut(s) 1263
XspI CTAG 7 cut(s) 75, 144, 245, 384, 1452, 1638, 1881
ZrmI AGTACT 1 cut(s) 1915
Zsp2I ATGCAT 3 cut(s) 133, 877, 2483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.