Rmu_co8283913.1_g000001

aldo-keto reductase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8283913.1
Physical Location & Seq
Reverse (-)
1 .. 837
837 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8283913.1_g000001.1.cds

Sequence Viewer

Length: 424 bp
atggaggaactaaagaagttggtgaaggaggggaagataaagtacatcggattatccgaagccagcccagaaacaataaagagggcacatgcagttcatcccattacagctgtacaaatggagtggtctctttggactcgcgacattgaggaagaaatcgtcccactttgcagggaacttggaatcgggatagtgccatatagccctcttggtcaaggatttttcggtggcagggcagttgtggaagctatacctgcaaagagtcatttggactggcttcctcgctttcaaggggagaacttggagaaaaacaaagacctttatgctgaaacacagaggttggctgaaaagcatggatgttcccctgcacaactcgcgctttcttgggttcttactcaaggcgaagatgttgtacctatccctg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

141

Amino Acids

15.77

Weight (kDa)

5.59

Isoelectric Point (pI)

38.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000149)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01350 FvH4_4g01550 FvH4_4g01550 FvH4_4g01550 FvH4_6g03001 FvH4_6g03010 FvH4_6g03030 FvH4_6g03050 FvH4_6g03050 FvH4_6g03050 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03051 FvH4_6g03052 FvH4_6g03070 FvH4_6g03070 FvH4_6g03110
malus_domestica MD04G1223200.v1.1 MD08G1240600.v1.1 MD12G1239000.v1.1 MD12G1239100.v1.1 MD12G1239200.v1.1 MD12G1239300.v1.1 MD12G1239400.v1.1 MD12G1239600.v1.1 MD12G1239800.v1.1 MD12G1240000.v1.1 MD12G1240300.v1.1 MD12G1240400.v1.1 MD13G1200700.v1.1
prunus_persica Prupe.1G021900_v2.0.a1 Prupe.1G022000_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G141300_v2.0.a1 Prupe.6G341900_v2.0.a1 Prupe.6G342100_v2.0.a1 Prupe.6G342200_v2.0.a1 Prupe.6G342300_v2.0.a1
pyrus_communis pycom04g19710 pycom12g21970 pycom12g21980 pycom12g21990 pycom12g22000 pycom12g22020 pycom13g17420 pycom16g16880
rosa_chinensis RchiOBHm_Chr3g0450451 RchiOBHm_Chr3g0451211 RchiOBHm_Chr3g0451221 RchiOBHm_Chr3g0451251 RchiOBHm_Chr3g0451261 RchiOBHm_Chr3g0451281 RchiOBHm_Chr3g0451321 RchiOBHm_Chr3g0451331 RchiOBHm_Chr3g0451341 RchiOBHm_Chr3g0454931 RchiOBHm_Chr4g0387811 RchiOBHm_Chr4g0387821 RchiOBHm_Chr4g0388101
rosa_laevigata RLG00000010080 RLG00000010092 RLG00000010093 RLG00000025402 RLG00000025666 RLG00000025667 RLG00000025668 RLG00000025669 RLG00000025672 RLG00000025673 RLG00000025674 RLG00000025675 RLG00000025676 RLG00000025678 RLG00000025679 RLG00000025729
rosa_multiflora Rmu_co8283913.1_g000001 Rmu_co8296899.1_g000001 Rmu_sc0000330.1_g000014 Rmu_sc0001792.1_g000004 Rmu_sc0002169.1_g000002 Rmu_sc0002180.1_g000028 Rmu_sc0002509.1_g000009 Rmu_sc0002575.1_g000011 Rmu_sc0002575.1_g000013 Rmu_sc0002575.1_g000015 Rmu_sc0002575.1_g000019 Rmu_sc0002575.1_g000021 Rmu_sc0002575.1_g000022 Rmu_sc0012229.1_g000010 Rmu_sc0012229.1_g000014 Rmu_sc0012229.1_g000017 Rmu_sc0012229.1_g000018 Rmu_sc0013958.1_g000001 Rmu_sc0030279.1_g000001 Rmu_sc0031850.1_g000002
rosa_roxburghii Rroxscaffold_163G00450840 Rroxscaffold_163G00450860 Rroxscaffold_163G00450870 Rroxscaffold_164G00436570 Rroxscaffold_5G00334430 Rroxscaffold_5G00334440 Rroxscaffold_5G00334650 Rroxscaffold_6G00428150 Rroxscaffold_6G00428660 Rroxscaffold_6G00428680 Rroxscaffold_6G00428710 Rroxscaffold_6G00428720 Rroxscaffold_6G00428730 Rroxscaffold_6G00428740 Rroxscaffold_6G00428750 Rroxscaffold_6G00428760
rosa_rugosa Rorug02G0535300 Rorug02G0627900 Rorug02G0632500 Rorug02G0632600 Rorug02G0633000 Rorug02G0633100 Rorug03G0003000 Rorug03G0313700 Rorug03G0314800 Rorug05G0229300 Rorug07G0155500
rosa_samantha Rh3AG028500 Rh3AG035300 Rh3AG035400 Rh3AG035500 Rh3AG035600 Rh3AG035700 Rh3AG035800 Rh3AG035900 Rh3AG062900 Rh3BG029000 Rh3BG035500 Rh3BG035600 Rh3BG035800 Rh3BG035900 Rh3BG036000 Rh3BG036100 Rh3BG036200 Rh3BG036300 Rh3BG036400 Rh3BG036500 Rh3BG036600 Rh3BG064800 Rh3CG027800 Rh3CG034200 Rh3CG034400 Rh3CG034500 Rh3CG034600 Rh3CG034700 Rh3CG034800 Rh3CG034900 Rh3CG063700 Rh3DG035100 Rh3DG035200 Rh3DG035400 Rh3DG035500 Rh3DG035600 Rh3DG035700 Rh3DG035800 Rh3DG035900 Rh3DG036000 Rh3DG036100 Rh3DG064800 Rh4AG018700 Rh4BG013600 Rh4BG013700 Rh4BG014900 Rh4CG021200 Rh4DG015600
rosa_wichuraiana Rw0G001850 Rw3G002200 Rw3G002580 Rw3G002590 Rw3G002610 Rw3G002620 Rw3G002630 Rw3G002640 Rw3G002650 Rw3G002660 Rw3G004920 Rw3G016120 Rw4G001220 Rw4G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 262
AccII CGCG 2 cut(s) 141, 377
AfaI GTAC 3 cut(s) 44, 114, 414
AgsI TTSAA 1 cut(s) 290
AluBI AGCT 2 cut(s) 110, 248
AluI AGCT 2 cut(s) 110, 248
Alw26I GTCTC 1 cut(s) 132
AspLEI GCGC 1 cut(s) 379
AsuHPI GGTGA 1 cut(s) 34
BaeGI GKGCMC 1 cut(s) 88
BarI GAAGNNNNNNTAC 3 cut(s) 26, 58, 396
BcoDI GTCTC 1 cut(s) 132
BfuAI ACCTGC 1 cut(s) 262
BpuEI CTTGAG 1 cut(s) 381
BsaI GGTCTC 1 cut(s) 132
Bse1I ACTGG 1 cut(s) 278
BseGI GGATG 2 cut(s) 97, 362
BseNI ACTGG 1 cut(s) 278
BseSI GKGCMC 1 cut(s) 88
BsgI GTGCAG 1 cut(s) 351
Bsh1236I CGCG 2 cut(s) 141, 377
BslFI GGGAC 1 cut(s) 146
BsmAI GTCTC 1 cut(s) 132
BsmFI GGGAC 1 cut(s) 146
Bso31I GGTCTC 1 cut(s) 132
Bsp1286I GDGCHC 1 cut(s) 88
Bsp1407I TGTACA 1 cut(s) 112
Bsp68I TCGCGA 1 cut(s) 141
BspFNI CGCG 2 cut(s) 141, 377
BspMI ACCTGC 1 cut(s) 262
BspTNI GGTCTC 1 cut(s) 132
BsrGI TGTACA 1 cut(s) 112
BsrI ACTGG 1 cut(s) 278
BstAUI TGTACA 1 cut(s) 112
BstC8I GCNNGC 1 cut(s) 64
BstF5I GGATG 2 cut(s) 97, 362
BstFNI CGCG 2 cut(s) 141, 377
BstHHI GCGC 1 cut(s) 379
BstMAI GTCTC 1 cut(s) 132
BstMWI GCNNNNNNNGC 2 cut(s) 254, 374
BstNSI RCATGY 1 cut(s) 92
BstSLI GKGCMC 1 cut(s) 88
BstUI CGCG 2 cut(s) 141, 377
BtsCI GGATG 2 cut(s) 97, 362
BtuMI TCGCGA 1 cut(s) 141
BveI ACCTGC 1 cut(s) 262
Cac8I GCNNGC 1 cut(s) 64
CfoI GCGC 1 cut(s) 379
Csp6I GTAC 3 cut(s) 43, 113, 413
CspCI CAANNNNNGTGG 2 cut(s) 104, 139
CviAII CATG 2 cut(s) 89, 353
CviJI RGCY 7 cut(s) 62, 66, 110, 204, 248, 277, 344
CviKI_1 RGCY 7 cut(s) 62, 66, 110, 204, 248, 277, 344
CviQI GTAC 3 cut(s) 43, 113, 413
Eco31I GGTCTC 1 cut(s) 132
FaeI CATG 2 cut(s) 92, 356
FaiI YATR 6 cut(s) 90, 199, 201, 251, 324, 354
FaqI GGGAC 1 cut(s) 146
FatI CATG 2 cut(s) 88, 352
FokI GGATG 2 cut(s) 84, 369
GlaI GCGC 1 cut(s) 378
HhaI GCGC 1 cut(s) 379
Hin1II CATG 2 cut(s) 92, 356
Hin6I GCGC 1 cut(s) 377
HinP1I GCGC 1 cut(s) 377
HinfI GANTC 3 cut(s) 136, 183, 262
HphI GGTGA 1 cut(s) 34
Hpy188I TCNGA 2 cut(s) 50, 58
Hpy188III TCNNGA 2 cut(s) 140, 187
HpyAV CCTTC 1 cut(s) 19
HpyCH4V TGCA 4 cut(s) 92, 171, 257, 368
HpyF10VI GCNNNNNNNGC 2 cut(s) 254, 374
Hsp92II CATG 2 cut(s) 92, 356
HspAI GCGC 1 cut(s) 377
LpnPI CCDG 7 cut(s) 76, 81, 157, 217, 259, 267, 378
MboII GAAGA 3 cut(s) 46, 164, 416
MhlI GDGCHC 1 cut(s) 88
MlyI GAGTC 2 cut(s) 130, 271
MnlI CCTC 6 cut(s) 22, 75, 142, 216, 291, 330
MspA1I CMGCKG 1 cut(s) 110
MvnI CGCG 2 cut(s) 141, 377
MwoI GCNNNNNNNGC 2 cut(s) 254, 374
NlaIII CATG 2 cut(s) 92, 356
NruI TCGCGA 1 cut(s) 141
NspI RCATGY 1 cut(s) 92
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PfeI GAWTC 1 cut(s) 183
PleI GAGTC 2 cut(s) 130, 270
PpsI GAGTC 2 cut(s) 130, 270
PvuII CAGCTG 1 cut(s) 110
RruI TCGCGA 1 cut(s) 141
RsaI GTAC 3 cut(s) 44, 114, 414
RsaNI GTAC 3 cut(s) 43, 113, 413
SchI GAGTC 2 cut(s) 130, 271
SduI GDGCHC 1 cut(s) 88
SetI ASST 6 cut(s) 112, 250, 256, 321, 341, 418
SmlI CTYRAG 1 cut(s) 396
SmoI CTYRAG 1 cut(s) 396
TatI WGTACW 2 cut(s) 42, 112
TfiI GAWTC 1 cut(s) 183
TspDTI ATGAA 1 cut(s) 86
XceI RCATGY 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.