mRNA-capping
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002183.1_g000023 Rmu_sc0019909.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00026600 Rroxscaffold_6G00406910 |
| rosa_samantha | Rh1CG017600 Rh1CG090300 Rh3BG167000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 18, 58 |
| AciI | CCGC | 2 cut(s) | 18, 58 |
| AcoI | YGGCCR | 1 cut(s) | 44 |
| AoxI | GGCC | 1 cut(s) | 44 |
| AspS9I | GGNCC | 1 cut(s) | 304 |
| AvaII | GGWCC | 1 cut(s) | 304 |
| BccI | CCATC | 1 cut(s) | 199 |
| BfaI | CTAG | 3 cut(s) | 254, 288, 313 |
| Bme18I | GGWCC | 1 cut(s) | 304 |
| BmgT120I | GGNCC | 1 cut(s) | 304 |
| BmsI | GCATC | 2 cut(s) | 57, 271 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 291 |
| BpuEI | CTTGAG | 1 cut(s) | 92 |
| BsaJI | CCNNGG | 2 cut(s) | 92, 307 |
| BseDI | CCNNGG | 2 cut(s) | 92, 307 |
| BseGI | GGATG | 2 cut(s) | 18, 193 |
| BseMII | CTCAG | 1 cut(s) | 188 |
| BshFI | GGCC | 1 cut(s) | 46 |
| BsnI | GGCC | 1 cut(s) | 46 |
| BspACI | CCGC | 2 cut(s) | 18, 58 |
| BspANI | GGCC | 1 cut(s) | 46 |
| BspCNI | CTCAG | 1 cut(s) | 187 |
| BsrBI | CCGCTC | 2 cut(s) | 18, 58 |
| BssECI | CCNNGG | 2 cut(s) | 92, 307 |
| BstDEI | CTNAG | 1 cut(s) | 174 |
| BstF5I | GGATG | 2 cut(s) | 18, 193 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 272, 281 |
| BsuRI | GGCC | 1 cut(s) | 46 |
| BtsCI | GGATG | 2 cut(s) | 18, 193 |
| BtsI | GCAGTG | 1 cut(s) | 207 |
| BtsIMutI | CAGTG | 1 cut(s) | 207 |
| Cfr13I | GGNCC | 1 cut(s) | 304 |
| CviAII | CATG | 3 cut(s) | 193, 214, 238 |
| CviJI | RGCY | 5 cut(s) | 46, 91, 218, 275, 312 |
| CviKI_1 | RGCY | 5 cut(s) | 46, 91, 218, 275, 312 |
| DdeI | CTNAG | 1 cut(s) | 174 |
| EaeI | YGGCCR | 1 cut(s) | 44 |
| Eco47I | GGWCC | 1 cut(s) | 304 |
| FaeI | CATG | 3 cut(s) | 196, 217, 241 |
| FatI | CATG | 3 cut(s) | 192, 213, 237 |
| FokI | GGATG | 2 cut(s) | 25, 200 |
| FspBI | CTAG | 3 cut(s) | 254, 288, 313 |
| HaeIII | GGCC | 1 cut(s) | 46 |
| Hin1II | CATG | 3 cut(s) | 196, 217, 241 |
| HinfI | GANTC | 1 cut(s) | 132 |
| Hpy166II | GTNNAC | 1 cut(s) | 304 |
| Hpy188I | TCNGA | 2 cut(s) | 96, 131 |
| Hpy8I | GTNNAC | 1 cut(s) | 304 |
| HpyAV | CCTTC | 2 cut(s) | 178, 236 |
| HpyCH4V | TGCA | 1 cut(s) | 213 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 272, 281 |
| HpyF3I | CTNAG | 1 cut(s) | 174 |
| Hsp92II | CATG | 3 cut(s) | 196, 217, 241 |
| LpnPI | CCDG | 1 cut(s) | 180 |
| LweI | GCATC | 2 cut(s) | 57, 271 |
| MaeI | CTAG | 3 cut(s) | 254, 288, 313 |
| MaeIII | GTNAC | 2 cut(s) | 98, 169 |
| MbiI | CCGCTC | 2 cut(s) | 18, 58 |
| MboII | GAAGA | 1 cut(s) | 76 |
| MluCI | AATT | 1 cut(s) | 261 |
| MmeI | TCCRAC | 1 cut(s) | 277 |
| MnlI | CCTC | 3 cut(s) | 21, 73, 102 |
| MseI | TTAA | 3 cut(s) | 23, 138, 260 |
| MslI | CAYNNNNRTG | 1 cut(s) | 218 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 272, 281 |
| NlaIII | CATG | 3 cut(s) | 196, 217, 241 |
| NmeAIII | GCCGAG | 1 cut(s) | 288 |
| NmuCI | GTSAC | 1 cut(s) | 169 |
| PfeI | GAWTC | 1 cut(s) | 132 |
| PspPI | GGNCC | 1 cut(s) | 304 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 110, 142 |
| RseI | CAYNNNNRTG | 1 cut(s) | 218 |
| SaqAI | TTAA | 3 cut(s) | 23, 138, 260 |
| Sau96I | GGNCC | 1 cut(s) | 304 |
| SetI | ASST | 3 cut(s) | 84, 169, 309 |
| SfaNI | GCATC | 2 cut(s) | 57, 271 |
| SinI | GGWCC | 1 cut(s) | 304 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 218 |
| SmlI | CTYRAG | 1 cut(s) | 71 |
| SmoI | CTYRAG | 1 cut(s) | 71 |
| Sse9I | AATT | 1 cut(s) | 261 |
| SsiI | CCGC | 2 cut(s) | 18, 58 |
| SspI | AATATT | 1 cut(s) | 40 |
| SspMI | CTAG | 3 cut(s) | 254, 288, 313 |
| TasI | AATT | 1 cut(s) | 261 |
| TfiI | GAWTC | 1 cut(s) | 132 |
| Tru1I | TTAA | 3 cut(s) | 23, 138, 260 |
| Tru9I | TTAA | 3 cut(s) | 23, 138, 260 |
| TscAI | CASTG | 1 cut(s) | 207 |
| TseFI | GTSAC | 1 cut(s) | 169 |
| Tsp45I | GTSAC | 1 cut(s) | 169 |
| TspDTI | ATGAA | 1 cut(s) | 124 |
| TspRI | CASTG | 1 cut(s) | 207 |
| VpaK11BI | GGWCC | 1 cut(s) | 304 |
| XspI | CTAG | 3 cut(s) | 254, 288, 313 |