Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0473261 RchiOBHm_Chr3g0473321 |
| rosa_laevigata | RLG00000024008 |
| rosa_multiflora | Rmu_sc0000908.1_g000015 |
| rosa_roxburghii | Rroxscaffold_6G00408160 |
| rosa_samantha | Rh3BG210600 Rh3BG210900 Rh3DG207800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 84 |
| AfaI | GTAC | 1 cut(s) | 338 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 84 |
| AflIII | ACRYGT | 1 cut(s) | 66 |
| AgsI | TTSAA | 1 cut(s) | 204 |
| AluBI | AGCT | 2 cut(s) | 152, 214 |
| AluI | AGCT | 2 cut(s) | 152, 214 |
| Alw26I | GTCTC | 1 cut(s) | 93 |
| ApeKI | GCWGC | 1 cut(s) | 12 |
| AsuC2I | CCSGG | 1 cut(s) | 30 |
| AsuHPI | GGTGA | 1 cut(s) | 212 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 201, 233 |
| BbsI | GAAGAC | 1 cut(s) | 122 |
| BbvI | GCAGC | 1 cut(s) | 24 |
| BccI | CCATC | 3 cut(s) | 2, 231, 398 |
| BclI | TGATCA | 1 cut(s) | 136 |
| BcnI | CCSGG | 1 cut(s) | 30 |
| BcoDI | GTCTC | 1 cut(s) | 93 |
| BfmI | CTRYAG | 1 cut(s) | 270 |
| BglII | AGATCT | 1 cut(s) | 172 |
| BisI | GCNGC | 1 cut(s) | 13 |
| BlsI | GCNGC | 1 cut(s) | 14 |
| Bme1390I | CCNGG | 1 cut(s) | 30 |
| BmiI | GGNNCC | 2 cut(s) | 76, 389 |
| BmrFI | CCNGG | 1 cut(s) | 30 |
| BpiI | GAAGAC | 1 cut(s) | 122 |
| BpuMI | CCSGG | 1 cut(s) | 30 |
| BsaI | GGTCTC | 1 cut(s) | 93 |
| BsaJI | CCNNGG | 1 cut(s) | 345 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 84 |
| Bse1I | ACTGG | 2 cut(s) | 261, 434 |
| BseDI | CCNNGG | 1 cut(s) | 345 |
| BseGI | GGATG | 2 cut(s) | 13, 91 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 84 |
| BseMII | CTCAG | 1 cut(s) | 110 |
| BseNI | ACTGG | 2 cut(s) | 261, 434 |
| BseXI | GCAGC | 1 cut(s) | 24 |
| BsiSI | CCGG | 1 cut(s) | 30 |
| BslFI | GGGAC | 1 cut(s) | 389 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 84 |
| BsmAI | GTCTC | 1 cut(s) | 93 |
| BsmFI | GGGAC | 1 cut(s) | 389 |
| Bso31I | GGTCTC | 1 cut(s) | 93 |
| Bsp143I | GATC | 4 cut(s) | 136, 141, 172, 363 |
| BspCNI | CTCAG | 1 cut(s) | 109 |
| BspLI | GGNNCC | 2 cut(s) | 76, 389 |
| BspMAI | CTGCAG | 1 cut(s) | 274 |
| BspTNI | GGTCTC | 1 cut(s) | 93 |
| BsrI | ACTGG | 2 cut(s) | 261, 434 |
| BssECI | CCNNGG | 1 cut(s) | 345 |
| BssMI | GATC | 4 cut(s) | 136, 141, 172, 363 |
| BssT1I | CCWWGG | 1 cut(s) | 345 |
| BstC8I | GCNNGC | 1 cut(s) | 270 |
| BstDEI | CTNAG | 1 cut(s) | 96 |
| BstF5I | GGATG | 2 cut(s) | 13, 91 |
| BstKTI | GATC | 4 cut(s) | 139, 144, 175, 366 |
| BstMAI | GTCTC | 1 cut(s) | 93 |
| BstMBI | GATC | 4 cut(s) | 136, 141, 172, 363 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 318 |
| BstSCI | CCNGG | 1 cut(s) | 28 |
| BstSFI | CTRYAG | 1 cut(s) | 270 |
| BstV1I | GCAGC | 1 cut(s) | 24 |
| BstV2I | GAAGAC | 1 cut(s) | 122 |
| BstX2I | RGATCY | 1 cut(s) | 172 |
| BstYI | RGATCY | 1 cut(s) | 172 |
| BtsCI | GGATG | 2 cut(s) | 13, 91 |
| BtsIMutI | CAGTG | 1 cut(s) | 254 |
| Cac8I | GCNNGC | 1 cut(s) | 270 |
| Csp6I | GTAC | 1 cut(s) | 337 |
| CviAII | CATG | 3 cut(s) | 16, 185, 417 |
| CviJI | RGCY | 4 cut(s) | 77, 152, 214, 280 |
| CviKI_1 | RGCY | 4 cut(s) | 77, 152, 214, 280 |
| CviQI | GTAC | 1 cut(s) | 337 |
| DdeI | CTNAG | 1 cut(s) | 96 |
| DpnI | GATC | 4 cut(s) | 138, 143, 174, 365 |
| DpnII | GATC | 4 cut(s) | 136, 141, 172, 363 |
| Eco130I | CCWWGG | 1 cut(s) | 345 |
| Eco31I | GGTCTC | 1 cut(s) | 93 |
| EcoT14I | CCWWGG | 1 cut(s) | 345 |
| ErhI | CCWWGG | 1 cut(s) | 345 |
| FaeI | CATG | 3 cut(s) | 19, 188, 420 |
| FaqI | GGGAC | 1 cut(s) | 389 |
| FatI | CATG | 3 cut(s) | 15, 184, 416 |
| FbaI | TGATCA | 1 cut(s) | 136 |
| Fnu4HI | GCNGC | 1 cut(s) | 13 |
| FokI | GGATG | 2 cut(s) | 20, 78 |
| Fsp4HI | GCNGC | 1 cut(s) | 13 |
| GluI | GCNGC | 1 cut(s) | 13 |
| HapII | CCGG | 1 cut(s) | 30 |
| Hin1II | CATG | 3 cut(s) | 19, 188, 420 |
| HincII | GTYRAC | 1 cut(s) | 46 |
| HindII | GTYRAC | 1 cut(s) | 46 |
| HpaII | CCGG | 1 cut(s) | 30 |
| HphI | GGTGA | 1 cut(s) | 212 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 2 cut(s) | 99, 141 |
| Hpy188III | TCNNGA | 2 cut(s) | 134, 145 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyCH4IV | ACGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 4 cut(s) | 248, 254, 272, 329 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 318 |
| HpyF3I | CTNAG | 1 cut(s) | 96 |
| HpySE526I | ACGT | 1 cut(s) | 68 |
| Hsp92II | CATG | 3 cut(s) | 19, 188, 420 |
| Ksp22I | TGATCA | 1 cut(s) | 136 |
| Kzo9I | GATC | 4 cut(s) | 136, 141, 172, 363 |
| LmnI | GCTCC | 1 cut(s) | 74 |
| LpnPI | CCDG | 6 cut(s) | 43, 138, 242, 258, 282, 415 |
| Lsp1109I | GCAGC | 1 cut(s) | 24 |
| MaeII | ACGT | 1 cut(s) | 68 |
| MalI | GATC | 4 cut(s) | 138, 143, 174, 365 |
| MboI | GATC | 4 cut(s) | 136, 141, 172, 363 |
| MboII | GAAGA | 6 cut(s) | 31, 112, 122, 209, 304, 369 |
| MflI | RGATCY | 1 cut(s) | 172 |
| MluCI | AATT | 2 cut(s) | 23, 199 |
| MmeI | TCCRAC | 1 cut(s) | 334 |
| MnlI | CCTC | 2 cut(s) | 105, 228 |
| MslI | CAYNNNNRTG | 1 cut(s) | 228 |
| MspI | CCGG | 1 cut(s) | 30 |
| MspR9I | CCNGG | 1 cut(s) | 30 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 318 |
| NciI | CCSGG | 1 cut(s) | 30 |
| NdeII | GATC | 4 cut(s) | 136, 141, 172, 363 |
| NlaIII | CATG | 3 cut(s) | 19, 188, 420 |
| NlaIV | GGNNCC | 2 cut(s) | 76, 389 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 84 |
| PkrI | GCNGC | 1 cut(s) | 14 |
| PspN4I | GGNNCC | 2 cut(s) | 76, 389 |
| PstI | CTGCAG | 1 cut(s) | 274 |
| PsuI | RGATCY | 1 cut(s) | 172 |
| RsaI | GTAC | 1 cut(s) | 338 |
| RsaNI | GTAC | 1 cut(s) | 337 |
| RseI | CAYNNNNRTG | 1 cut(s) | 228 |
| SatI | GCNGC | 1 cut(s) | 13 |
| Sau3AI | GATC | 4 cut(s) | 136, 141, 172, 363 |
| SbfI | CCTGCAGG | 1 cut(s) | 274 |
| ScrFI | CCNGG | 1 cut(s) | 30 |
| SdaI | CCTGCAGG | 1 cut(s) | 274 |
| SetI | ASST | 4 cut(s) | 71, 154, 210, 216 |
| SfcI | CTRYAG | 1 cut(s) | 270 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 228 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 274 |
| Sse9I | AATT | 2 cut(s) | 23, 199 |
| StyD4I | CCNGG | 1 cut(s) | 28 |
| StyI | CCWWGG | 1 cut(s) | 345 |
| TaiI | ACGT | 1 cut(s) | 71 |
| TasI | AATT | 2 cut(s) | 23, 199 |
| TatI | WGTACW | 1 cut(s) | 336 |
| TscAI | CASTG | 1 cut(s) | 261 |
| TseI | GCWGC | 1 cut(s) | 12 |
| TspDTI | ATGAA | 2 cut(s) | 32, 405 |
| TspRI | CASTG | 1 cut(s) | 261 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 84 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 401 |