Rh3BG290800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
29114412 .. 29122742
8331 bp
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UTR
Exon/CDS
Intron
Rh3BG290800.1

Sequence Viewer

Length: 195 bp
ATGATTCAGGCTTGGAATTGCAGACGAAGCAAACCTTCTCTTACTATTTCTCGCTCTGCTAAAAAATCCAATTGGAAAGAAGATGACTTTGCCGAGATGAGAGTGTCTTTCTTGAACAGATTGGAATATCTGACGAAGAGCACCGAGCTCTTACTTCTCTCTGATTTTGCAAATCCTTCTCGGGAACACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

64

Amino Acids

7.58

Weight (kDa)

9.43

Isoelectric Point (pI)

44.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020057)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AflIII ACRYGT 1 cut(s) 189
AgsI TTSAA 1 cut(s) 115
AluBI AGCT 1 cut(s) 148
AluI AGCT 1 cut(s) 148
Alw21I GWGCWC 2 cut(s) 143, 150
Ama87I CYCGRG 1 cut(s) 180
AvaI CYCGRG 1 cut(s) 180
BanII GRGCYC 1 cut(s) 150
Bbv12I GWGCWC 2 cut(s) 143, 150
BmeT110I CYCGRG 1 cut(s) 180
BsiHKAI GWGCWC 2 cut(s) 143, 150
BsiHKCI CYCGRG 1 cut(s) 180
BsoBI CYCGRG 1 cut(s) 180
Bsp1286I GDGCHC 2 cut(s) 143, 150
BspQI GCTCTTC 1 cut(s) 131
Bst6I CTCTTC 1 cut(s) 131
BstMWI GCNNNNNNNGC 1 cut(s) 27
BstNSI RCATGY 1 cut(s) 193
CviAII CATG 1 cut(s) 190
CviJI RGCY 2 cut(s) 11, 148
CviKI_1 RGCY 2 cut(s) 11, 148
Eam1104I CTCTTC 1 cut(s) 131
EarI CTCTTC 1 cut(s) 131
Ecl136II GAGCTC 1 cut(s) 148
Eco24I GRGCYC 1 cut(s) 150
Eco53kI GAGCTC 1 cut(s) 148
Eco88I CYCGRG 1 cut(s) 180
EcoICRI GAGCTC 1 cut(s) 148
EcoT38I GRGCYC 1 cut(s) 150
FaeI CATG 1 cut(s) 193
FaiI YATR 1 cut(s) 191
FalI AAGNNNNNCTT 2 cut(s) 19, 51
FatI CATG 1 cut(s) 189
FriOI GRGCYC 1 cut(s) 150
FspEI CC 9 cut(s) 48, 58, 82, 106, 107, 157, 166, 167, 189
Hin1II CATG 1 cut(s) 193
HinfI GANTC 1 cut(s) 4
Hpy188I TCNGA 2 cut(s) 132, 163
Hpy188III TCNNGA 2 cut(s) 112, 182
HpyAV CCTTC 2 cut(s) 45, 186
HpyCH4V TGCA 2 cut(s) 21, 170
HpyF10VI GCNNNNNNNGC 1 cut(s) 27
Hsp92II CATG 1 cut(s) 193
LguI GCTCTTC 1 cut(s) 131
MboII GAAGA 2 cut(s) 92, 148
MfeI CAATTG 1 cut(s) 70
MhlI GDGCHC 2 cut(s) 143, 150
MluCI AATT 2 cut(s) 16, 70
MunI CAATTG 1 cut(s) 70
MwoI GCNNNNNNNGC 1 cut(s) 27
NlaIII CATG 1 cut(s) 193
NmeAIII GCCGAG 1 cut(s) 118
NspI RCATGY 1 cut(s) 193
PciI ACATGT 1 cut(s) 189
PciSI GCTCTTC 1 cut(s) 131
PfeI GAWTC 1 cut(s) 4
PscI ACATGT 1 cut(s) 189
Psp124BI GAGCTC 1 cut(s) 150
SacI GAGCTC 1 cut(s) 150
SapI GCTCTTC 1 cut(s) 131
SduI GDGCHC 2 cut(s) 143, 150
SetI ASST 2 cut(s) 37, 150
SgeI CNNG 6 cut(s) 20, 24, 63, 106, 124, 157
Sse9I AATT 2 cut(s) 16, 70
SstI GAGCTC 1 cut(s) 150
TasI AATT 2 cut(s) 16, 70
TfiI GAWTC 1 cut(s) 4
XceI RCATGY 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.