Rh7CG420800

SPRY domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
54340660 .. 54354026
13367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG420800.1

Sequence Viewer

Length: 468 bp
ATGGGAAGTAATGGACAACCCCCAAACCAATTACATGGAAGAAAACGAGGAAGAAGACGAACAATCAAAACCACCGCCGTCACCGCCGTCGCAACCACCAAGCTCGTTGATCCTATGACAATTAAGGAGCCCGCAAATGACGACGAGCCCAATATGGAGGCCATTAATCCAGCAGCCATCAACCTGCATAACGGCAACAAAACCGAGACCGAAGCCTCTGAAGATCTCTTCCGGTCCATCAAATCCCTAGCACCGATTTTGAGACCCCCAGAACCCAGAGTGTACCATACCCAGATTCAGGCTTGGAATTGCAGACGAAGCAAATCTTCTCTTACTATTTCTCGCTCTGCTCAAAGTCGTTTTGATCTGAGAAGTTCCTGTTGTATTTCTTTCGTGGGTCTTCACTCATTTGTTGCCAAAAGGAAGTGTTGTTTTAGCGGAGCACACCTCGTTCTCTGCAAACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0002376 GO:0002520 GO:0002682 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008284 GO:0008757 GO:0009058 GO:0009059 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018023 GO:0018024 GO:0018130 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0022607 GO:0030097 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0034708 GO:0034968 GO:0035097 GO:0036211 GO:0042054 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043627 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045595 GO:0045637 GO:0045652 GO:0046483 GO:0048188 GO:0048316 GO:0048366 GO:0048367 GO:0048513 GO:0048518 GO:0048522 GO:0048534 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0051568 GO:0051716 GO:0060255 GO:0060776 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0080182 GO:0090304 GO:0097159 GO:0097659 GO:0099402 GO:0140096 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1903506 GO:1903706 GO:1904837 GO:1905392 GO:1990234 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

155

Amino Acids

17.2

Weight (kDa)

9.99

Isoelectric Point (pI)

61.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020057)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 192
AciI CCGC 4 cut(s) 75, 84, 132, 438
AclWI GGATC 1 cut(s) 104
AcuI CTGAAG 1 cut(s) 240
AfaI GTAC 1 cut(s) 284
AfiI CCNNNNNNNGG 1 cut(s) 298
AluBI AGCT 1 cut(s) 103
AluI AGCT 1 cut(s) 103
Alw21I GWGCWC 1 cut(s) 445
Alw26I GTCTC 2 cut(s) 200, 256
AlwI GGATC 1 cut(s) 104
AoxI GGCC 1 cut(s) 159
ApeKI GCWGC 1 cut(s) 173
AseI ATTAAT 1 cut(s) 165
AspS9I GGNCC 1 cut(s) 234
AsuHPI GGTGA 1 cut(s) 73
AvaII GGWCC 1 cut(s) 234
BanII GRGCYC 2 cut(s) 132, 150
BbsI GAAGAC 2 cut(s) 61, 392
Bbv12I GWGCWC 1 cut(s) 445
BbvI GCAGC 1 cut(s) 185
BccI CCATC 2 cut(s) 185, 245
BceAI ACGGC 3 cut(s) 62, 71, 208
BcoDI GTCTC 2 cut(s) 200, 256
BfaI CTAG 1 cut(s) 248
BfuAI ACCTGC 1 cut(s) 192
BglII AGATCT 1 cut(s) 223
BisI GCNGC 1 cut(s) 174
BlsI GCNGC 1 cut(s) 175
Bme18I GGWCC 1 cut(s) 234
BmgT120I GGNCC 1 cut(s) 234
BmiI GGNNCC 1 cut(s) 129
BpiI GAAGAC 2 cut(s) 61, 392
BplI GAGNNNNNCTC 2 cut(s) 432, 464
BsaI GGTCTC 2 cut(s) 200, 256
BsaWI WCCGGW 1 cut(s) 231
Bsc4I CCNNNNNNNGG 1 cut(s) 298
BseLI CCNNNNNNNGG 1 cut(s) 298
BseMII CTCAG 1 cut(s) 359
BseXI GCAGC 1 cut(s) 185
BshFI GGCC 1 cut(s) 161
BsiHKAI GWGCWC 1 cut(s) 445
BsiSI CCGG 1 cut(s) 232
BslI CCNNNNNNNGG 1 cut(s) 298
BsmAI GTCTC 2 cut(s) 200, 256
BsnI GGCC 1 cut(s) 161
Bso31I GGTCTC 2 cut(s) 200, 256
Bsp1286I GDGCHC 3 cut(s) 132, 150, 445
Bsp143I GATC 3 cut(s) 109, 223, 364
BspACI CCGC 4 cut(s) 75, 84, 132, 438
BspANI GGCC 1 cut(s) 161
BspCNI CTCAG 1 cut(s) 360
BspLI GGNNCC 1 cut(s) 129
BspMI ACCTGC 1 cut(s) 192
BspPI GGATC 1 cut(s) 104
BspTNI GGTCTC 2 cut(s) 200, 256
BssMI GATC 3 cut(s) 109, 223, 364
Bst6I CTCTTC 1 cut(s) 233
BstC8I GCNNGC 1 cut(s) 132
BstDEI CTNAG 1 cut(s) 368
BstKTI GATC 3 cut(s) 112, 226, 367
BstMAI GTCTC 2 cut(s) 200, 256
BstMBI GATC 3 cut(s) 109, 223, 364
BstMWI GCNNNNNNNGC 2 cut(s) 83, 318
BstV1I GCAGC 1 cut(s) 185
BstV2I GAAGAC 2 cut(s) 61, 392
BstX2I RGATCY 1 cut(s) 223
BstXI CCANNNNNNTGG 1 cut(s) 35
BstYI RGATCY 1 cut(s) 223
BsuRI GGCC 1 cut(s) 161
BveI ACCTGC 1 cut(s) 192
Cac8I GCNNGC 1 cut(s) 132
Cfr13I GGNCC 1 cut(s) 234
Csp6I GTAC 1 cut(s) 283
CviAII CATG 1 cut(s) 35
CviJI RGCY 7 cut(s) 103, 130, 148, 161, 176, 215, 302
CviKI_1 RGCY 7 cut(s) 103, 130, 148, 161, 176, 215, 302
CviQI GTAC 1 cut(s) 283
DdeI CTNAG 1 cut(s) 368
DpnI GATC 3 cut(s) 111, 225, 366
DpnII GATC 3 cut(s) 109, 223, 364
Eam1104I CTCTTC 1 cut(s) 233
EarI CTCTTC 1 cut(s) 233
Eco24I GRGCYC 2 cut(s) 132, 150
Eco31I GGTCTC 2 cut(s) 200, 256
Eco47I GGWCC 1 cut(s) 234
Eco57I CTGAAG 1 cut(s) 240
EcoT38I GRGCYC 2 cut(s) 132, 150
FaeI CATG 1 cut(s) 38
FaiI YATR 5 cut(s) 36, 116, 155, 189, 288
FalI AAGNNNNNCTT 2 cut(s) 310, 342
FatI CATG 1 cut(s) 34
FauI CCCGC 1 cut(s) 139
Fnu4HI GCNGC 1 cut(s) 174
FriOI GRGCYC 2 cut(s) 132, 150
Fsp4HI GCNGC 1 cut(s) 174
FspBI CTAG 1 cut(s) 248
GluI GCNGC 1 cut(s) 174
HaeIII GGCC 1 cut(s) 161
HapII CCGG 1 cut(s) 232
Hin1II CATG 1 cut(s) 38
HinfI GANTC 1 cut(s) 295
HpaII CCGG 1 cut(s) 232
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 1 cut(s) 283
Hpy188I TCNGA 2 cut(s) 220, 369
Hpy8I GTNNAC 1 cut(s) 283
Hpy99I CGWCG 2 cut(s) 92, 146
HpyCH4V TGCA 3 cut(s) 187, 312, 459
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 318
HpyF3I CTNAG 1 cut(s) 368
Hsp92II CATG 1 cut(s) 38
Kzo9I GATC 3 cut(s) 109, 223, 364
LmnI GCTCC 2 cut(s) 127, 440
LpnPI CCDG 8 cut(s) 183, 197, 245, 282, 284, 289, 305, 391
Lsp1109I GCAGC 1 cut(s) 185
MaeI CTAG 1 cut(s) 248
MaeIII GTNAC 1 cut(s) 79
MalI GATC 3 cut(s) 111, 225, 366
MboI GATC 3 cut(s) 109, 223, 364
MboII GAAGA 7 cut(s) 51, 63, 66, 220, 233, 318, 392
MflI RGATCY 1 cut(s) 223
MhlI GDGCHC 3 cut(s) 132, 150, 445
MluCI AATT 3 cut(s) 29, 120, 307
MnlI CCTC 4 cut(s) 41, 151, 226, 458
MseI TTAA 2 cut(s) 123, 165
MspI CCGG 1 cut(s) 232
MwoI GCNNNNNNNGC 2 cut(s) 83, 318
NdeII GATC 3 cut(s) 109, 223, 364
NlaIII CATG 1 cut(s) 38
NlaIV GGNNCC 1 cut(s) 129
NmuCI GTSAC 1 cut(s) 79
PfeI GAWTC 1 cut(s) 295
PkrI GCNGC 1 cut(s) 175
PshBI ATTAAT 1 cut(s) 165
PspN4I GGNNCC 1 cut(s) 129
PspPI GGNCC 1 cut(s) 234
PsuI RGATCY 1 cut(s) 223
RsaI GTAC 1 cut(s) 284
RsaNI GTAC 1 cut(s) 283
SaqAI TTAA 2 cut(s) 123, 165
SatI GCNGC 1 cut(s) 174
Sau3AI GATC 3 cut(s) 109, 223, 364
Sau96I GGNCC 1 cut(s) 234
SduI GDGCHC 3 cut(s) 132, 150, 445
SetI ASST 3 cut(s) 105, 186, 450
SinI GGWCC 1 cut(s) 234
Sse9I AATT 3 cut(s) 29, 120, 307
SsiI CCGC 4 cut(s) 75, 84, 132, 438
SspMI CTAG 1 cut(s) 248
TaqII GACCGA 1 cut(s) 224
TasI AATT 3 cut(s) 29, 120, 307
TfiI GAWTC 1 cut(s) 295
Tru1I TTAA 2 cut(s) 123, 165
Tru9I TTAA 2 cut(s) 123, 165
TseFI GTSAC 1 cut(s) 79
TseI GCWGC 1 cut(s) 173
Tsp45I GTSAC 1 cut(s) 79
VpaK11BI GGWCC 1 cut(s) 234
VspI ATTAAT 1 cut(s) 165
XspI CTAG 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.