Rh3CG226400

exocyst complex component

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
21252661 .. 21256172
3512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG226400.1

Sequence Viewer

Length: 1521 bp
ATGGTATCAGGTTCAATAACAGATAACTCTGACATTTTAGCTCCTCAAGTAACTTTATCTCTTTTGTATTTCAGCAAGCCGGTGGAGCCTGATCGTCTGTTTGACTGTCTTCCCGACTCTCTAAGACCATCAGCAGATCCATCTGGGCAGAATGGTAATGGAAAGTCTGAGCAACAGCAGAGAAGGTTACAACCTGTTATTTACACACCACTAACTCTTATTCCCCCAAGGGTTCTGCCATTGCTGCATGATTTAGCCCAACAAATGGCTCTAGCTGGCCATCAACAACAACTATTTAAGATCTACAGGGACACTCGTGCTTCAGCTTTGGAGCAAAGTTTGAGGAAACTAGGTGTGGAAAGACTTAGTAAAGATGATGTCCAGAAAATGCAGTGGGAGGTTTTAGAGGCTAAGATTGGGAATTGGATACATTATATGCGGATAGCAGTGAAACTGCTGTTTTCTGGGGAAAAGAAAATATGTGATCAAATATTTGAAGGTGCTGAGTCACTCAGGGAACCATGTTTTGCTGAAGTTGCTGCAAACAGTGTTTCTGTGCTTCTTAGTTTCGGGGAGGCTATTGCCAGAAGCAAGAGGTCACCTGAAAAATTATTTGTTCTTTTAGACATGTATGAGATAATGCGAGAACTTCAGTCAGAGATTGAACTTCTTTTTGGAAGTAAACCTTCCATTGAAATGCGGGATGCTGCAGTGAGTTTGACAAAGCGCCTAGCTCAGACAGCCCAGGAAACCTTTGGTGATTTTGAAGAAGCGGTTGAAAAAGATGCCACAAAAACTGCTGTTCTTGATGGAACTGTCCATCCATTAACAAGCTATGTGATAAACTATGTGAAGTTCCTCTTTGATTATCAGTCTACACTGAAGCAACTTTTTCAAGAGTTTGATGAGGCTGAAGCTGATGCCCAATTAACAACTGTAACTACAAGGATTATGACGGCTCTTCAAAATAACCTGGATGGAAAATCTAAGCAGTATAAGGATCCTGCTTTGACTCAATTATTTCTCATGAACAACATTCACTACATAGTGAGATCTGTACGGAGGTCAGAAGCAAAGGACTTGTTGGGGGATGACTGGGTGCAGATACACCGAAGGATTGTGCAGCAGCATGCAAATCAGTATAAGAGGGTTTCTTGGGCAAAGATTCTGCAGTGTCTTACTGTCCAGGGCACAAATTCATCTGGTGGTGCTGCAGCTGAGAGTACACTTTCAAGAGCAACGGTCAAAGAGCGATTCAAGACCTTTAATATCCAATTTGAGGAGCTTCATCAAAGGCAATCACAGTGGACAATTCCTGACAGTGAATTGCGAGAGTCTTTAAGGCTGGCTGTAGCTGAAGTTCTTTTGCCTGCTTACAGATCATTCATCAAACGTTTCGGACCGATGATTGACAATGGGAAAAACCCGGGGAAGTATATCAAGTTCAGTCCAGAGGCTATTGAGTCCATGCTGAATGAATTTTTTGAGAGTAAGACCTGGGGTGATCAAAACCGTAGATAG

Protein Analysis

506

Amino Acids

57.64

Weight (kDa)

6.75

Isoelectric Point (pI)

50.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_C PF03081 141 - 493 2.4e-128 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 265
AccI GTMKAC 1 cut(s) 875
AciI CCGC 3 cut(s) 439, 700, 773
AclI AACGTT 1 cut(s) 1393
AclWI GGATC 3 cut(s) 131, 995, 1008
AcoI YGGCCR 1 cut(s) 277
AcsI RAATTY 2 cut(s) 1195, 1478
AcuI CTGAAG 6 cut(s) 306, 552, 635, 902, 933, 1377
AfaI GTAC 2 cut(s) 1059, 1225
AfiI CCNNNNNNNGG 2 cut(s) 265, 1279
AflIII ACRYGT 1 cut(s) 627
AjnI CCWGG 4 cut(s) 744, 972, 1185, 1496
AjuI GAANNNNNNNTTGG 2 cut(s) 657, 689
AloI GAACNNNNNNTCC 2 cut(s) 805, 837
AluBI AGCT 9 cut(s) 41, 275, 326, 734, 834, 917, 1217, 1285, 1355
AluI AGCT 9 cut(s) 41, 275, 326, 734, 834, 917, 1217, 1285, 1355
AlwI GGATC 3 cut(s) 131, 995, 1008
Ama87I CYCGRG 1 cut(s) 1426
AoxI GGCC 1 cut(s) 277
ApeKI GCWGC 7 cut(s) 244, 539, 707, 1123, 1126, 1211, 1214
ApoI RAATTY 2 cut(s) 1195, 1478
AspLEI GCGC 1 cut(s) 729
AspS9I GGNCC 1 cut(s) 1400
AsuC2I CCSGG 2 cut(s) 1427, 1428
AsuHPI GGTGA 3 cut(s) 591, 770, 1514
AvaI CYCGRG 1 cut(s) 1426
AvaII GGWCC 1 cut(s) 1400
BaeGI GKGCMC 1 cut(s) 1193
BalI TGGCCA 1 cut(s) 279
BamHI GGATCC 1 cut(s) 1000
BauI CACGAG 1 cut(s) 315
BbsI GAAGAC 1 cut(s) 101
BbvI GCAGC 7 cut(s) 231, 526, 694, 1135, 1138, 1198, 1226
BccI CCATC 6 cut(s) 136, 148, 288, 803, 828, 971
BceAI ACGGC 1 cut(s) 972
BciT130I CCWGG 4 cut(s) 746, 974, 1187, 1498
BciVI GTATCC 1 cut(s) 420
BclI TGATCA 2 cut(s) 484, 1504
BcnI CCSGG 2 cut(s) 1427, 1428
BfaI CTAG 3 cut(s) 272, 350, 731
BfmI CTRYAG 5 cut(s) 304, 708, 1169, 1212, 1350
BfoI RGCGCY 1 cut(s) 730
BfuI GTATCC 1 cut(s) 420
BglII AGATCT 2 cut(s) 300, 1052
BisI GCNGC 7 cut(s) 245, 540, 708, 1124, 1127, 1212, 1215
BlsI GCNGC 7 cut(s) 246, 541, 709, 1125, 1128, 1213, 1216
Bme1390I CCNGG 6 cut(s) 746, 974, 1187, 1427, 1428, 1498
Bme18I GGWCC 1 cut(s) 1400
BmeT110I CYCGRG 1 cut(s) 1426
BmgT120I GGNCC 1 cut(s) 1400
BmiI GGNNCC 3 cut(s) 87, 519, 1002
BmrFI CCNGG 6 cut(s) 746, 974, 1187, 1427, 1428, 1498
BmrI ACTGGG 1 cut(s) 1105
BmsI GCATC 3 cut(s) 694, 775, 910
BmuI ACTGGG 1 cut(s) 1105
BpiI GAAGAC 1 cut(s) 101
BpuEI CTTGAG 1 cut(s) 30
BpuMI CCSGG 2 cut(s) 1427, 1428
BsaJI CCNNGG 6 cut(s) 227, 744, 1186, 1426, 1427, 1497
Bsc4I CCNNNNNNNGG 2 cut(s) 265, 1279
Bse118I RCCGGY 1 cut(s) 79
Bse1I ACTGG 1 cut(s) 1100
Bse3DI GCAATG 1 cut(s) 239
BseBI CCWGG 4 cut(s) 746, 974, 1187, 1498
BseDI CCNNGG 6 cut(s) 227, 744, 1186, 1426, 1427, 1497
BseGI GGATG 4 cut(s) 709, 820, 982, 1096
BseLI CCNNNNNNNGG 2 cut(s) 265, 1279
BseMI GCAATG 1 cut(s) 239
BseMII CTCAG 5 cut(s) 159, 495, 526, 749, 1209
BseNI ACTGG 1 cut(s) 1100
BseRI GAGGAG 2 cut(s) 33, 1295
BseSI GKGCMC 1 cut(s) 1193
BseXI GCAGC 7 cut(s) 231, 526, 694, 1135, 1138, 1198, 1226
BsgI GTGCAG 2 cut(s) 1121, 1142
BshFI GGCC 1 cut(s) 279
BsiHKCI CYCGRG 1 cut(s) 1426
BsiSI CCGG 2 cut(s) 80, 1427
BslFI GGGAC 1 cut(s) 323
BslI CCNNNNNNNGG 2 cut(s) 265, 1279
BsmFI GGGAC 1 cut(s) 323
BsnI GGCC 1 cut(s) 279
BsoBI CYCGRG 1 cut(s) 1426
Bsp1286I GDGCHC 1 cut(s) 1193
Bsp143I GATC 8 cut(s) 91, 136, 300, 484, 1000, 1052, 1379, 1504
BspACI CCGC 3 cut(s) 439, 700, 773
BspANI GGCC 1 cut(s) 279
BspCNI CTCAG 5 cut(s) 160, 496, 525, 748, 1210
BspHI TCATGA 1 cut(s) 1026
BspLI GGNNCC 3 cut(s) 87, 519, 1002
BspMAI CTGCAG 3 cut(s) 712, 1173, 1216
BspPI GGATC 3 cut(s) 131, 995, 1008
BspQI GCTCTTC 1 cut(s) 966
BsrDI GCAATG 1 cut(s) 239
BsrFI RCCGGY 1 cut(s) 79
BsrI ACTGG 1 cut(s) 1100
BssAI RCCGGY 1 cut(s) 79
BssECI CCNNGG 6 cut(s) 227, 744, 1186, 1426, 1427, 1497
BssMI GATC 8 cut(s) 91, 136, 300, 484, 1000, 1052, 1379, 1504
BssSI CACGAG 1 cut(s) 315
BssT1I CCWWGG 1 cut(s) 227
Bst2BI CACGAG 1 cut(s) 315
Bst2UI CCWGG 4 cut(s) 746, 974, 1187, 1498
Bst4CI ACNGT 9 cut(s) 107, 548, 817, 937, 1183, 1243, 1305, 1322, 1514
Bst6I CTCTTC 1 cut(s) 966
BstC8I GCNNGC 5 cut(s) 77, 277, 1131, 1347, 1371
BstEII GGTNACC 1 cut(s) 597
BstF5I GGATG 4 cut(s) 709, 820, 982, 1096
BstH2I RGCGCY 1 cut(s) 730
BstHHI GCGC 1 cut(s) 729
BstKTI GATC 8 cut(s) 94, 139, 303, 487, 1003, 1055, 1382, 1507
BstMBI GATC 8 cut(s) 91, 136, 300, 484, 1000, 1052, 1379, 1504
BstMWI GCNNNNNNNGC 4 cut(s) 85, 244, 536, 740
BstNI CCWGG 4 cut(s) 746, 974, 1187, 1498
BstNSI RCATGY 2 cut(s) 631, 1133
BstPI GGTNACC 1 cut(s) 597
BstSCI CCNGG 6 cut(s) 744, 972, 1185, 1425, 1426, 1496
BstSFI CTRYAG 5 cut(s) 304, 708, 1169, 1212, 1350
BstSLI GKGCMC 1 cut(s) 1193
BstV1I GCAGC 7 cut(s) 231, 526, 694, 1135, 1138, 1198, 1226
BstV2I GAAGAC 1 cut(s) 101
BstX2I RGATCY 4 cut(s) 136, 300, 1000, 1052
BstYI RGATCY 4 cut(s) 136, 300, 1000, 1052
BsuI GTATCC 1 cut(s) 420
BsuRI GGCC 1 cut(s) 279
BtsCI GGATG 4 cut(s) 709, 820, 982, 1096
BtsI GCAGTG 4 cut(s) 398, 453, 717, 1178
BtsIMutI CAGTG 8 cut(s) 398, 453, 553, 717, 878, 1178, 1310, 1327
Cac8I GCNNGC 5 cut(s) 77, 277, 1131, 1347, 1371
CciI TCATGA 1 cut(s) 1026
CfoI GCGC 1 cut(s) 729
Cfr10I RCCGGY 1 cut(s) 79
Cfr13I GGNCC 1 cut(s) 1400
Cfr9I CCCGGG 1 cut(s) 1426
CpoI CGGWCCG 1 cut(s) 1400
Csp6I GTAC 2 cut(s) 1058, 1224
CspCI CAANNNNNGTGG 2 cut(s) 1286, 1321
CspI CGGWCCG 1 cut(s) 1400
CviAII CATG 6 cut(s) 248, 522, 628, 1027, 1130, 1468
CviQI GTAC 2 cut(s) 1058, 1224
DpnI GATC 8 cut(s) 93, 138, 302, 486, 1002, 1054, 1381, 1506
DpnII GATC 8 cut(s) 91, 136, 300, 484, 1000, 1052, 1379, 1504
EaeI YGGCCR 1 cut(s) 277
Eam1104I CTCTTC 1 cut(s) 966
EarI CTCTTC 1 cut(s) 966
Eco130I CCWWGG 1 cut(s) 227
Eco47I GGWCC 1 cut(s) 1400
Eco57I CTGAAG 6 cut(s) 306, 552, 635, 902, 933, 1377
Eco88I CYCGRG 1 cut(s) 1426
Eco91I GGTNACC 1 cut(s) 597
EcoO65I GGTNACC 1 cut(s) 597
EcoRII CCWGG 4 cut(s) 744, 972, 1185, 1496
EcoT14I CCWWGG 1 cut(s) 227
ErhI CCWWGG 1 cut(s) 227
FaeI CATG 6 cut(s) 251, 525, 631, 1030, 1133, 1471
FalI AAGNNNNNCTT 4 cut(s) 670, 702, 845, 877
FaqI GGGAC 1 cut(s) 323
FatI CATG 6 cut(s) 247, 521, 627, 1026, 1129, 1467
FauI CCCGC 1 cut(s) 693
FbaI TGATCA 2 cut(s) 484, 1504
FblI GTMKAC 1 cut(s) 875
Fnu4HI GCNGC 7 cut(s) 245, 540, 708, 1124, 1127, 1212, 1215
FokI GGATG 4 cut(s) 716, 807, 989, 1103
Fsp4HI GCNGC 7 cut(s) 245, 540, 708, 1124, 1127, 1212, 1215
FspBI CTAG 3 cut(s) 272, 350, 731
GlaI GCGC 1 cut(s) 728
GluI GCNGC 7 cut(s) 245, 540, 708, 1124, 1127, 1212, 1215
HaeII RGCGCY 1 cut(s) 730
HaeIII GGCC 1 cut(s) 279
HapII CCGG 2 cut(s) 80, 1427
HhaI GCGC 1 cut(s) 729
Hin1II CATG 6 cut(s) 251, 525, 631, 1030, 1133, 1471
Hin6I GCGC 1 cut(s) 727
HinP1I GCGC 1 cut(s) 727
HinfI GANTC 7 cut(s) 116, 506, 1012, 1165, 1254, 1334, 1463
HpaII CCGG 2 cut(s) 80, 1427
HphI GGTGA 3 cut(s) 591, 770, 1514
Hpy166II GTNNAC 4 cut(s) 683, 876, 1226, 1308
Hpy188I TCNGA 6 cut(s) 31, 169, 658, 738, 1069, 1400
Hpy188III TCNNGA 9 cut(s) 113, 382, 806, 896, 1027, 1233, 1258, 1316, 1451
Hpy8I GTNNAC 4 cut(s) 683, 876, 1226, 1308
HpyAV CCTTC 4 cut(s) 177, 491, 696, 1107
HpyCH4III ACNGT 9 cut(s) 107, 548, 817, 937, 1183, 1243, 1305, 1322, 1514
HpyCH4IV ACGT 1 cut(s) 1393
HpyCH4V TGCA 9 cut(s) 247, 391, 542, 710, 1102, 1123, 1133, 1171, 1214
HpyF10VI GCNNNNNNNGC 4 cut(s) 85, 244, 536, 740
HpySE526I ACGT 1 cut(s) 1393
Hsp92II CATG 6 cut(s) 251, 525, 631, 1030, 1133, 1471
HspAI GCGC 1 cut(s) 727
Ksp22I TGATCA 2 cut(s) 484, 1504
Kzo9I GATC 8 cut(s) 91, 136, 300, 484, 1000, 1052, 1379, 1504
LguI GCTCTTC 1 cut(s) 966
LmnI GCTCC 4 cut(s) 46, 85, 331, 1282
Lsp1109I GCAGC 7 cut(s) 231, 526, 694, 1135, 1138, 1198, 1226
LweI GCATC 3 cut(s) 694, 775, 910
MaeI CTAG 3 cut(s) 272, 350, 731
MaeII ACGT 1 cut(s) 1393
MaeIII GTNAC 5 cut(s) 49, 186, 507, 597, 937
MalI GATC 8 cut(s) 93, 138, 302, 486, 1002, 1054, 1381, 1506
MboI GATC 8 cut(s) 91, 136, 300, 484, 1000, 1052, 1379, 1504
MboII GAAGA 3 cut(s) 101, 779, 953
MflI RGATCY 4 cut(s) 136, 300, 1000, 1052
MhlI GDGCHC 1 cut(s) 1193
MlsI TGGCCA 1 cut(s) 279
MluCI AATT 9 cut(s) 421, 608, 926, 1016, 1195, 1274, 1311, 1325, 1478
MluNI TGGCCA 1 cut(s) 279
MlyI GAGTC 5 cut(s) 110, 515, 1006, 1343, 1472
Mox20I TGGCCA 1 cut(s) 279
MscI TGGCCA 1 cut(s) 279
MseI TTAA 5 cut(s) 297, 827, 929, 1266, 1340
MslI CAYNNNNRTG 1 cut(s) 695
Msp20I TGGCCA 1 cut(s) 279
MspA1I CMGCKG 1 cut(s) 1217
MspI CCGG 2 cut(s) 80, 1427
MspR9I CCNGG 6 cut(s) 746, 974, 1187, 1427, 1428, 1498
MvaI CCWGG 4 cut(s) 746, 974, 1187, 1498
MwoI GCNNNNNNNGC 4 cut(s) 85, 244, 536, 740
NciI CCSGG 2 cut(s) 1427, 1428
NdeII GATC 8 cut(s) 91, 136, 300, 484, 1000, 1052, 1379, 1504
NlaIII CATG 6 cut(s) 251, 525, 631, 1030, 1133, 1471
NlaIV GGNNCC 3 cut(s) 87, 519, 1002
NmuCI GTSAC 2 cut(s) 507, 597
NspI RCATGY 2 cut(s) 631, 1133
PaeI GCATGC 1 cut(s) 1133
PagI TCATGA 1 cut(s) 1026
PciI ACATGT 1 cut(s) 627
PciSI GCTCTTC 1 cut(s) 966
PfeI GAWTC 2 cut(s) 1165, 1254
PflMI CCANNNNNTGG 1 cut(s) 265
PkrI GCNGC 7 cut(s) 246, 541, 709, 1125, 1128, 1213, 1216
PleI GAGTC 5 cut(s) 110, 514, 1006, 1342, 1471
PpsI GAGTC 5 cut(s) 110, 514, 1006, 1342, 1471
PscI ACATGT 1 cut(s) 627
Psp1406I AACGTT 1 cut(s) 1393
Psp6I CCWGG 4 cut(s) 744, 972, 1185, 1496
PspEI GGTNACC 1 cut(s) 597
PspGI CCWGG 4 cut(s) 744, 972, 1185, 1496
PspN4I GGNNCC 3 cut(s) 87, 519, 1002
PspPI GGNCC 1 cut(s) 1400
PsrI GAACNNNNNNTAC 4 cut(s) 1344, 1376, 1427, 1459
PstI CTGCAG 3 cut(s) 712, 1173, 1216
PsuI RGATCY 4 cut(s) 136, 300, 1000, 1052
PvuII CAGCTG 1 cut(s) 1217
RsaI GTAC 2 cut(s) 1059, 1225
RsaNI GTAC 2 cut(s) 1058, 1224
RseI CAYNNNNRTG 1 cut(s) 695
Rsr2I CGGWCCG 1 cut(s) 1400
RsrII CGGWCCG 1 cut(s) 1400
SapI GCTCTTC 1 cut(s) 966
SaqAI TTAA 5 cut(s) 297, 827, 929, 1266, 1340
SatI GCNGC 7 cut(s) 245, 540, 708, 1124, 1127, 1212, 1215
Sau3AI GATC 8 cut(s) 91, 136, 300, 484, 1000, 1052, 1379, 1504
Sau96I GGNCC 1 cut(s) 1400
SchI GAGTC 5 cut(s) 110, 515, 1006, 1343, 1472
ScrFI CCNGG 6 cut(s) 746, 974, 1187, 1427, 1428, 1498
SduI GDGCHC 1 cut(s) 1193
SfaNI GCATC 3 cut(s) 694, 775, 910
SfcI CTRYAG 5 cut(s) 304, 708, 1169, 1212, 1350
SinI GGWCC 1 cut(s) 1400
SmaI CCCGGG 1 cut(s) 1428
SmiMI CAYNNNNRTG 1 cut(s) 695
SmlI CTYRAG 1 cut(s) 45
SmoI CTYRAG 1 cut(s) 45
SphI GCATGC 1 cut(s) 1133
Sse9I AATT 9 cut(s) 421, 608, 926, 1016, 1195, 1274, 1311, 1325, 1478
SsiI CCGC 3 cut(s) 439, 700, 773
SspI AATATT 1 cut(s) 492
SspMI CTAG 3 cut(s) 272, 350, 731
StyD4I CCNGG 6 cut(s) 744, 972, 1185, 1425, 1426, 1496
StyI CCWWGG 1 cut(s) 227
TaaI ACNGT 9 cut(s) 107, 548, 817, 937, 1183, 1243, 1305, 1322, 1514
TaiI ACGT 1 cut(s) 1396
TaqII GACCGA 1 cut(s) 1417
TasI AATT 9 cut(s) 421, 608, 926, 1016, 1195, 1274, 1311, 1325, 1478
TatI WGTACW 1 cut(s) 1223
TfiI GAWTC 2 cut(s) 1165, 1254
Tru1I TTAA 5 cut(s) 297, 827, 929, 1266, 1340
Tru9I TTAA 5 cut(s) 297, 827, 929, 1266, 1340
TscAI CASTG 8 cut(s) 398, 453, 553, 717, 885, 1178, 1310, 1327
TseFI GTSAC 2 cut(s) 507, 597
TseI GCWGC 7 cut(s) 244, 539, 707, 1123, 1126, 1211, 1214
Tsp45I GTSAC 2 cut(s) 507, 597
TspDTI ATGAA 5 cut(s) 1043, 1188, 1277, 1375, 1491
TspGWI ACGGA 1 cut(s) 1075
TspMI CCCGGG 1 cut(s) 1426
TspRI CASTG 8 cut(s) 398, 453, 553, 717, 885, 1178, 1310, 1327
Van91I CCANNNNNTGG 1 cut(s) 265
VpaK11BI GGWCC 1 cut(s) 1400
XapI RAATTY 2 cut(s) 1195, 1478
XceI RCATGY 2 cut(s) 631, 1133
XcmI CCANNNNNNNNNTGG 1 cut(s) 752
XmaI CCCGGG 1 cut(s) 1426
XmiI GTMKAC 1 cut(s) 875
XspI CTAG 3 cut(s) 272, 350, 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.