RRP12-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G23540 |
| fragaria_vesca | FvH4_6g24030 FvH4_6g24030 FvH4_6g24030 FvH4_6g24030 |
| malus_domestica | MD12G1075000.v1.1 |
| prunus_persica | Prupe.7G058600_v2.0.a1 |
| pyrus_communis | pycom12g06460 pycom14g06290 |
| rosa_chinensis | RchiOBHm_Chr3g0482611 |
| rosa_laevigata | RLG00000023336 |
| rosa_multiflora | Rmu_co8265035.1_g000001 Rmu_sc0015494.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00399070 |
| rosa_rugosa | Rorug03G0197600 |
| rosa_samantha | Rh3AG248700 Rh3BG284200 Rh3CG281700 Rh3DG277900 |
| rosa_wichuraiana | Rw3G022460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1166 |
| AarI | CACCTGC | 1 cut(s) | 1475 |
| Acc36I | ACCTGC | 2 cut(s) | 1019, 1475 |
| AccB1I | GGYRCC | 3 cut(s) | 97, 289, 1486 |
| AccBSI | CCGCTC | 2 cut(s) | 2346, 2682 |
| AccII | CGCG | 2 cut(s) | 646, 775 |
| AclWI | GGATC | 3 cut(s) | 1001, 2571, 3175 |
| AcoI | YGGCCR | 3 cut(s) | 312, 1572, 2025 |
| AcsI | RAATTY | 3 cut(s) | 1684, 2084, 2310 |
| AcuI | CTGAAG | 5 cut(s) | 636, 1053, 1361, 1742, 1910 |
| AcyI | GRCGYC | 4 cut(s) | 24, 98, 153, 2851 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 232, 1028, 1847, 3368 |
| AflII | CTTAAG | 1 cut(s) | 2051 |
| AflIII | ACRYGT | 2 cut(s) | 216, 1099 |
| AhdI | GACNNNNNGTC | 4 cut(s) | 157, 217, 220, 506 |
| AhlI | ACTAGT | 1 cut(s) | 2827 |
| AjnI | CCWGG | 4 cut(s) | 273, 2211, 2894, 3430 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2021, 2053 |
| Alw21I | GWGCWC | 3 cut(s) | 15, 282, 2136 |
| Alw26I | GTCTC | 8 cut(s) | 856, 860, 2255, 2583, 2606, 2905, 2911, 3421 |
| AlwI | GGATC | 3 cut(s) | 1001, 2571, 3175 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 923, 1961, 2693 |
| Ama87I | CYCGRG | 1 cut(s) | 2908 |
| AoxI | GGCC | 7 cut(s) | 30, 312, 367, 1018, 1572, 1929, 2025 |
| ApeKI | GCWGC | 8 cut(s) | 103, 251, 256, 466, 935, 1058, 1814, 2773 |
| ApoI | RAATTY | 3 cut(s) | 1684, 2084, 2310 |
| AseI | ATTAAT | 1 cut(s) | 2630 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2036 |
| AspLEI | GCGC | 4 cut(s) | 100, 141, 256, 331 |
| AsuC2I | CCSGG | 1 cut(s) | 2388 |
| AsuHPI | GGTGA | 9 cut(s) | 163, 335, 989, 1456, 1469, 2054, 2402, 2658, 3208 |
| AsuNHI | GCTAGC | 1 cut(s) | 1346 |
| AvaI | CYCGRG | 1 cut(s) | 2908 |
| AxyI | CCTNAGG | 1 cut(s) | 504 |
| BalI | TGGCCA | 2 cut(s) | 1574, 2027 |
| BanI | GGYRCC | 3 cut(s) | 97, 289, 1486 |
| BanII | GRGCYC | 1 cut(s) | 2212 |
| BauI | CACGAG | 1 cut(s) | 1626 |
| Bbv12I | GWGCWC | 3 cut(s) | 15, 282, 2136 |
| BbvCI | CCTCAGC | 1 cut(s) | 1701 |
| BbvI | GCAGC | 8 cut(s) | 115, 238, 243, 453, 947, 1070, 1801, 2760 |
| BceAI | ACGGC | 3 cut(s) | 22, 230, 3024 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2770, 2804 |
| BciT130I | CCWGG | 4 cut(s) | 275, 2213, 2896, 3432 |
| BciVI | GTATCC | 1 cut(s) | 2642 |
| BcnI | CCSGG | 1 cut(s) | 2388 |
| BcoDI | GTCTC | 8 cut(s) | 856, 860, 2255, 2583, 2606, 2905, 2911, 3421 |
| BcuI | ACTAGT | 1 cut(s) | 2827 |
| BfmI | CTRYAG | 8 cut(s) | 467, 870, 933, 957, 1056, 1395, 1613, 2883 |
| BfoI | RGCGCY | 2 cut(s) | 101, 332 |
| BfrI | CTTAAG | 1 cut(s) | 2051 |
| BfuAI | ACCTGC | 2 cut(s) | 1019, 1475 |
| BfuI | GTATCC | 1 cut(s) | 2642 |
| BglII | AGATCT | 2 cut(s) | 1105, 2218 |
| BmcAI | AGTACT | 5 cut(s) | 819, 2049, 2146, 2826, 3226 |
| Bme1390I | CCNGG | 5 cut(s) | 275, 2213, 2388, 2896, 3432 |
| BmeRI | GACNNNNNGTC | 4 cut(s) | 157, 217, 220, 506 |
| BmeT110I | CYCGRG | 1 cut(s) | 2908 |
| BmiI | GGNNCC | 9 cut(s) | 99, 237, 291, 771, 1413, 1488, 2209, 2900, 3147 |
| BmrFI | CCNGG | 5 cut(s) | 275, 2213, 2388, 2896, 3432 |
| BmsI | GCATC | 9 cut(s) | 312, 327, 832, 1252, 1526, 1810, 1975, 1985, 2672 |
| BmtI | GCTAGC | 1 cut(s) | 1350 |
| BpmI | CTGGAG | 3 cut(s) | 539, 2966, 3050 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1701, 2745 |
| BpuEI | CTTGAG | 4 cut(s) | 464, 554, 1259, 2605 |
| BpuMI | CCSGG | 1 cut(s) | 2388 |
| BsaHI | GRCGYC | 4 cut(s) | 24, 98, 153, 2851 |
| BsaI | GGTCTC | 2 cut(s) | 2255, 3421 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 68, 98, 2939, 2969 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 232, 1028, 1847, 3368 |
| Bse118I | RCCGGY | 2 cut(s) | 369, 383 |
| Bse1I | ACTGG | 5 cut(s) | 556, 979, 2265, 2658, 2949 |
| Bse21I | CCTNAGG | 1 cut(s) | 504 |
| Bse3DI | GCAATG | 2 cut(s) | 141, 473 |
| BseBI | CCWGG | 4 cut(s) | 275, 2213, 2896, 3432 |
| BseGI | GGATG | 6 cut(s) | 144, 1258, 1663, 1990, 3123, 3415 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 232, 1028, 1847, 3368 |
| BseMI | GCAATG | 2 cut(s) | 141, 473 |
| BseNI | ACTGG | 5 cut(s) | 556, 979, 2265, 2658, 2949 |
| BseRI | GAGGAG | 6 cut(s) | 107, 377, 878, 1220, 2285, 2555 |
| BseXI | GCAGC | 8 cut(s) | 115, 238, 243, 453, 947, 1070, 1801, 2760 |
| Bsh1236I | CGCG | 2 cut(s) | 646, 775 |
| BshFI | GGCC | 7 cut(s) | 32, 314, 369, 1020, 1574, 1931, 2027 |
| BshNI | GGYRCC | 3 cut(s) | 97, 289, 1486 |
| BsiHKAI | GWGCWC | 3 cut(s) | 15, 282, 2136 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2908 |
| BsiSI | CCGG | 3 cut(s) | 370, 384, 2387 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 232, 1028, 1847, 3368 |
| BsmAI | GTCTC | 8 cut(s) | 856, 860, 2255, 2583, 2606, 2905, 2911, 3421 |
| BsnI | GGCC | 7 cut(s) | 32, 314, 369, 1020, 1574, 1931, 2027 |
| Bso31I | GGTCTC | 2 cut(s) | 2255, 3421 |
| BsoBI | CYCGRG | 1 cut(s) | 2908 |
| Bsp1286I | GDGCHC | 4 cut(s) | 15, 282, 2136, 2212 |
| Bsp143I | GATC | 9 cut(s) | 993, 1105, 1184, 2218, 2227, 2362, 2502, 2576, 3167 |
| BspANI | GGCC | 7 cut(s) | 32, 314, 369, 1020, 1574, 1931, 2027 |
| BspFNI | CGCG | 2 cut(s) | 646, 775 |
| BspHI | TCATGA | 2 cut(s) | 996, 2067 |
| BspLI | GGNNCC | 9 cut(s) | 99, 237, 291, 771, 1413, 1488, 2209, 2900, 3147 |
| BspMAI | CTGCAG | 5 cut(s) | 471, 937, 1060, 1399, 2887 |
| BspMI | ACCTGC | 2 cut(s) | 1019, 1475 |
| BspOI | GCTAGC | 1 cut(s) | 1350 |
| BspPI | GGATC | 3 cut(s) | 1001, 2571, 3175 |
| BspQI | GCTCTTC | 2 cut(s) | 3, 2124 |
| BspT107I | GGYRCC | 3 cut(s) | 97, 289, 1486 |
| BspTI | CTTAAG | 1 cut(s) | 2051 |
| BspTNI | GGTCTC | 2 cut(s) | 2255, 3421 |
| BsrBI | CCGCTC | 2 cut(s) | 2346, 2682 |
| BsrDI | GCAATG | 2 cut(s) | 141, 473 |
| BsrFI | RCCGGY | 2 cut(s) | 369, 383 |
| BsrI | ACTGG | 5 cut(s) | 556, 979, 2265, 2658, 2949 |
| BssAI | RCCGGY | 2 cut(s) | 369, 383 |
| BssMI | GATC | 9 cut(s) | 993, 1105, 1184, 2218, 2227, 2362, 2502, 2576, 3167 |
| BssNI | GRCGYC | 4 cut(s) | 24, 98, 153, 2851 |
| BssSI | CACGAG | 1 cut(s) | 1626 |
| BssT1I | CCWWGG | 2 cut(s) | 315, 3060 |
| Bst2BI | CACGAG | 1 cut(s) | 1626 |
| Bst2UI | CCWGG | 4 cut(s) | 275, 2213, 2896, 3432 |
| Bst4CI | ACNGT | 9 cut(s) | 530, 709, 925, 1342, 1750, 1908, 2938, 3353, 3450 |
| Bst6I | CTCTTC | 3 cut(s) | 3, 2124, 2526 |
| BstACI | GRCGYC | 4 cut(s) | 24, 98, 153, 2851 |
| BstAFI | CTTAAG | 1 cut(s) | 2051 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 475, 1403 |
| BstC8I | GCNNGC | 5 cut(s) | 371, 583, 1348, 1576, 1767 |
| BstDSI | CCRYGG | 2 cut(s) | 231, 773 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1026 |
| BstF5I | GGATG | 6 cut(s) | 144, 1258, 1663, 1990, 3123, 3415 |
| BstFNI | CGCG | 2 cut(s) | 646, 775 |
| BstH2I | RGCGCY | 2 cut(s) | 101, 332 |
| BstHHI | GCGC | 4 cut(s) | 100, 141, 256, 331 |
| BstKTI | GATC | 9 cut(s) | 996, 1108, 1187, 2221, 2230, 2365, 2505, 2579, 3170 |
| BstMAI | GTCTC | 8 cut(s) | 856, 860, 2255, 2583, 2606, 2905, 2911, 3421 |
| BstMBI | GATC | 9 cut(s) | 993, 1105, 1184, 2218, 2227, 2362, 2502, 2576, 3167 |
| BstNI | CCWGG | 4 cut(s) | 275, 2213, 2896, 3432 |
| BstNSI | RCATGY | 5 cut(s) | 220, 688, 800, 1103, 1758 |
| BstSCI | CCNGG | 5 cut(s) | 273, 2211, 2386, 2894, 3430 |
| BstSFI | CTRYAG | 8 cut(s) | 467, 870, 933, 957, 1056, 1395, 1613, 2883 |
| BstUI | CGCG | 2 cut(s) | 646, 775 |
| BstV1I | GCAGC | 8 cut(s) | 115, 238, 243, 453, 947, 1070, 1801, 2760 |
| BstX2I | RGATCY | 3 cut(s) | 1105, 2218, 2576 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 460, 3118 |
| BstYI | RGATCY | 3 cut(s) | 1105, 2218, 2576 |
| Bsu36I | CCTNAGG | 1 cut(s) | 504 |
| BsuI | GTATCC | 1 cut(s) | 2642 |
| BsuRI | GGCC | 7 cut(s) | 32, 314, 369, 1020, 1574, 1931, 2027 |
| BtgI | CCRYGG | 2 cut(s) | 231, 773 |
| BtgZI | GCGATG | 2 cut(s) | 2136, 2182 |
| BtsCI | GGATG | 6 cut(s) | 144, 1258, 1663, 1990, 3123, 3415 |
| BtsI | GCAGTG | 2 cut(s) | 2694, 2880 |
| BtsIMutI | CAGTG | 6 cut(s) | 571, 1913, 2272, 2665, 2694, 2880 |
| BveI | ACCTGC | 2 cut(s) | 1019, 1475 |
| Cac8I | GCNNGC | 5 cut(s) | 371, 583, 1348, 1576, 1767 |
| CaiI | CAGNNNCTG | 3 cut(s) | 923, 1961, 2693 |
| CciI | TCATGA | 2 cut(s) | 996, 2067 |
| CfoI | GCGC | 4 cut(s) | 100, 141, 256, 331 |
| Cfr10I | RCCGGY | 2 cut(s) | 369, 383 |
| Cfr42I | CCGCGG | 1 cut(s) | 776 |
| CseI | GACGC | 3 cut(s) | 32, 161, 2840 |
| DinI | GGCGCC | 1 cut(s) | 99 |
| DpnI | GATC | 9 cut(s) | 995, 1107, 1186, 2220, 2229, 2364, 2504, 2578, 3169 |
| DpnII | GATC | 9 cut(s) | 993, 1105, 1184, 2218, 2227, 2362, 2502, 2576, 3167 |
| DraI | TTTAAA | 2 cut(s) | 1980, 3307 |
| DriI | GACNNNNNGTC | 4 cut(s) | 157, 217, 220, 506 |
| EaeI | YGGCCR | 3 cut(s) | 312, 1572, 2025 |
| Eam1104I | CTCTTC | 3 cut(s) | 3, 2124, 2526 |
| Eam1105I | GACNNNNNGTC | 4 cut(s) | 157, 217, 220, 506 |
| EarI | CTCTTC | 3 cut(s) | 3, 2124, 2526 |
| EciI | GGCGGA | 1 cut(s) | 193 |
| Eco130I | CCWWGG | 2 cut(s) | 315, 3060 |
| Eco24I | GRGCYC | 1 cut(s) | 2212 |
| Eco31I | GGTCTC | 2 cut(s) | 2255, 3421 |
| Eco32I | GATATC | 1 cut(s) | 2395 |
| Eco57I | CTGAAG | 5 cut(s) | 636, 1053, 1361, 1742, 1910 |
| Eco81I | CCTNAGG | 1 cut(s) | 504 |
| Eco88I | CYCGRG | 1 cut(s) | 2908 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1026 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1412, 1930, 3146 |
| EcoRI | GAATTC | 1 cut(s) | 2310 |
| EcoRII | CCWGG | 4 cut(s) | 273, 2211, 2894, 3430 |
| EcoRV | GATATC | 1 cut(s) | 2395 |
| EcoT14I | CCWWGG | 2 cut(s) | 315, 3060 |
| EcoT22I | ATGCAT | 2 cut(s) | 1180, 1743 |
| EcoT38I | GRGCYC | 1 cut(s) | 2212 |
| EgeI | GGCGCC | 1 cut(s) | 99 |
| EheI | GGCGCC | 1 cut(s) | 99 |
| ErhI | CCWWGG | 2 cut(s) | 315, 3060 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 516, 548 |
| FauI | CCCGC | 6 cut(s) | 183, 291, 313, 1343, 2351, 2968 |
| FauNDI | CATATG | 1 cut(s) | 889 |
| FokI | GGATG | 6 cut(s) | 131, 1265, 1650, 1997, 3130, 3422 |
| FriOI | GRGCYC | 1 cut(s) | 2212 |
| GlaI | GCGC | 4 cut(s) | 99, 140, 255, 330 |
| GsuI | CTGGAG | 3 cut(s) | 539, 2966, 3050 |
| HaeII | RGCGCY | 2 cut(s) | 101, 332 |
| HaeIII | GGCC | 7 cut(s) | 32, 314, 369, 1020, 1574, 1931, 2027 |
| HapII | CCGG | 3 cut(s) | 370, 384, 2387 |
| HgaI | GACGC | 3 cut(s) | 32, 161, 2840 |
| HhaI | GCGC | 4 cut(s) | 100, 141, 256, 331 |
| Hin1I | GRCGYC | 4 cut(s) | 24, 98, 153, 2851 |
| Hin6I | GCGC | 4 cut(s) | 98, 139, 254, 329 |
| HinP1I | GCGC | 4 cut(s) | 98, 139, 254, 329 |
| HincII | GTYRAC | 2 cut(s) | 1369, 1798 |
| HindII | GTYRAC | 2 cut(s) | 1369, 1798 |
| HindIII | AAGCTT | 1 cut(s) | 701 |
| HpaI | GTTAAC | 1 cut(s) | 1798 |
| HpaII | CCGG | 3 cut(s) | 370, 384, 2387 |
| HphI | GGTGA | 9 cut(s) | 163, 335, 989, 1456, 1469, 2054, 2402, 2658, 3208 |
| Hpy166II | GTNNAC | 3 cut(s) | 1369, 1474, 1798 |
| Hpy8I | GTNNAC | 3 cut(s) | 1369, 1474, 1798 |
| Hpy99I | CGWCG | 4 cut(s) | 26, 155, 215, 313 |
| HpyAV | CCTTC | 5 cut(s) | 1145, 1717, 2198, 2766, 3193 |
| HpyCH4III | ACNGT | 9 cut(s) | 530, 709, 925, 1342, 1750, 1908, 2938, 3353, 3450 |
| HpyCH4IV | ACGT | 2 cut(s) | 2513, 3265 |
| HpySE526I | ACGT | 2 cut(s) | 2513, 3265 |
| Hsp92I | GRCGYC | 4 cut(s) | 24, 98, 153, 2851 |
| HspAI | GCGC | 4 cut(s) | 98, 139, 254, 329 |
| KasI | GGCGCC | 1 cut(s) | 97 |
| KroI | GCCGGC | 1 cut(s) | 369 |
| KroNI | GCCGGC | 1 cut(s) | 371 |
| KspAI | GTTAAC | 1 cut(s) | 1798 |
| KspI | CCGCGG | 1 cut(s) | 776 |
| Kzo9I | GATC | 9 cut(s) | 993, 1105, 1184, 2218, 2227, 2362, 2502, 2576, 3167 |
| LguI | GCTCTTC | 2 cut(s) | 3, 2124 |
| LmnI | GCTCC | 7 cut(s) | 146, 285, 300, 346, 1514, 2207, 2684 |
| Lsp1109I | GCAGC | 8 cut(s) | 115, 238, 243, 453, 947, 1070, 1801, 2760 |
| LweI | GCATC | 9 cut(s) | 312, 327, 832, 1252, 1526, 1810, 1975, 1985, 2672 |
| MaeII | ACGT | 2 cut(s) | 2513, 3265 |
| MaeIII | GTNAC | 9 cut(s) | 549, 1457, 1711, 2367, 2509, 2878, 2932, 2989, 3412 |
| MalI | GATC | 9 cut(s) | 995, 1107, 1186, 2220, 2229, 2364, 2504, 2578, 3169 |
| MbiI | CCGCTC | 2 cut(s) | 2346, 2682 |
| MboI | GATC | 9 cut(s) | 993, 1105, 1184, 2218, 2227, 2362, 2502, 2576, 3167 |
| MflI | RGATCY | 3 cut(s) | 1105, 2218, 2576 |
| MhlI | GDGCHC | 4 cut(s) | 15, 282, 2136, 2212 |
| MlsI | TGGCCA | 2 cut(s) | 1574, 2027 |
| MluNI | TGGCCA | 2 cut(s) | 1574, 2027 |
| Mly113I | GGCGCC | 1 cut(s) | 98 |
| MlyI | GAGTC | 7 cut(s) | 167, 1724, 1934, 2110, 2419, 2453, 2585 |
| MmeI | TCCRAC | 2 cut(s) | 1492, 1691 |
| Mox20I | TGGCCA | 2 cut(s) | 1574, 2027 |
| Mph1103I | ATGCAT | 2 cut(s) | 1180, 1743 |
| MroNI | GCCGGC | 1 cut(s) | 369 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2036 |
| MscI | TGGCCA | 2 cut(s) | 1574, 2027 |
| MslI | CAYNNNNRTG | 5 cut(s) | 975, 1626, 2167, 2642, 3210 |
| Msp20I | TGGCCA | 2 cut(s) | 1574, 2027 |
| MspA1I | CMGCKG | 2 cut(s) | 286, 775 |
| MspCI | CTTAAG | 1 cut(s) | 2051 |
| MspI | CCGG | 3 cut(s) | 370, 384, 2387 |
| MspR9I | CCNGG | 5 cut(s) | 275, 2213, 2388, 2896, 3432 |
| MvaI | CCWGG | 4 cut(s) | 275, 2213, 2896, 3432 |
| MvnI | CGCG | 2 cut(s) | 646, 775 |
| NaeI | GCCGGC | 1 cut(s) | 371 |
| NarI | GGCGCC | 1 cut(s) | 98 |
| NciI | CCSGG | 1 cut(s) | 2388 |
| NdeI | CATATG | 1 cut(s) | 889 |
| NdeII | GATC | 9 cut(s) | 993, 1105, 1184, 2218, 2227, 2362, 2502, 2576, 3167 |
| NgoMIV | GCCGGC | 1 cut(s) | 369 |
| NheI | GCTAGC | 1 cut(s) | 1346 |
| NlaIV | GGNNCC | 9 cut(s) | 99, 237, 291, 771, 1413, 1488, 2209, 2900, 3147 |
| NmeAIII | GCCGAG | 4 cut(s) | 52, 58, 74, 181 |
| NmuCI | GTSAC | 6 cut(s) | 549, 1457, 2509, 2878, 2932, 3412 |
| NsiI | ATGCAT | 2 cut(s) | 1180, 1743 |
| NspI | RCATGY | 5 cut(s) | 220, 688, 800, 1103, 1758 |
| PacI | TTAATTAA | 1 cut(s) | 2634 |
| PaeR7I | CTCGAG | 1 cut(s) | 2908 |
| PagI | TCATGA | 2 cut(s) | 996, 2067 |
| PaqCI | CACCTGC | 1 cut(s) | 1475 |
| PciI | ACATGT | 2 cut(s) | 216, 1099 |
| PciSI | GCTCTTC | 2 cut(s) | 3, 2124 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 30 |
| PdiI | GCCGGC | 1 cut(s) | 371 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2036 |
| PfeI | GAWTC | 7 cut(s) | 449, 980, 1000, 2015, 2440, 2522, 3101 |
| PleI | GAGTC | 7 cut(s) | 166, 1724, 1934, 2109, 2418, 2453, 2585 |
| PluTI | GGCGCC | 1 cut(s) | 101 |
| PpsI | GAGTC | 7 cut(s) | 166, 1724, 1934, 2109, 2418, 2453, 2585 |
| PpuMI | RGGWCCY | 2 cut(s) | 1412, 3146 |
| PscI | ACATGT | 2 cut(s) | 216, 1099 |
| PshBI | ATTAAT | 1 cut(s) | 2630 |
| PsiI | TTATAA | 1 cut(s) | 1166 |
| Psp5II | RGGWCCY | 2 cut(s) | 1412, 3146 |
| Psp6I | CCWGG | 4 cut(s) | 273, 2211, 2894, 3430 |
| PspGI | CCWGG | 4 cut(s) | 273, 2211, 2894, 3430 |
| PspN4I | GGNNCC | 9 cut(s) | 99, 237, 291, 771, 1413, 1488, 2209, 2900, 3147 |
| PspPPI | RGGWCCY | 2 cut(s) | 1412, 3146 |
| PstI | CTGCAG | 5 cut(s) | 471, 937, 1060, 1399, 2887 |
| PstNI | CAGNNNCTG | 3 cut(s) | 923, 1961, 2693 |
| PsuI | RGATCY | 3 cut(s) | 1105, 2218, 2576 |
| RseI | CAYNNNNRTG | 5 cut(s) | 975, 1626, 2167, 2642, 3210 |
| SacII | CCGCGG | 1 cut(s) | 776 |
| SapI | GCTCTTC | 2 cut(s) | 3, 2124 |
| Sau3AI | GATC | 9 cut(s) | 993, 1105, 1184, 2218, 2227, 2362, 2502, 2576, 3167 |
| ScaI | AGTACT | 5 cut(s) | 819, 2049, 2146, 2826, 3226 |
| SchI | GAGTC | 7 cut(s) | 167, 1724, 1934, 2110, 2419, 2453, 2585 |
| ScrFI | CCNGG | 5 cut(s) | 275, 2213, 2388, 2896, 3432 |
| SduI | GDGCHC | 4 cut(s) | 15, 282, 2136, 2212 |
| SfaNI | GCATC | 9 cut(s) | 312, 327, 832, 1252, 1526, 1810, 1975, 1985, 2672 |
| SfcI | CTRYAG | 8 cut(s) | 467, 870, 933, 957, 1056, 1395, 1613, 2883 |
| SfoI | GGCGCC | 1 cut(s) | 99 |
| Sfr274I | CTCGAG | 1 cut(s) | 2908 |
| Sfr303I | CCGCGG | 1 cut(s) | 776 |
| SgrBI | CCGCGG | 1 cut(s) | 776 |
| SlaI | CTCGAG | 1 cut(s) | 2908 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 975, 1626, 2167, 2642, 3210 |
| SmlI | CTYRAG | 6 cut(s) | 479, 533, 1274, 2051, 2584, 2908 |
| SmoI | CTYRAG | 6 cut(s) | 479, 533, 1274, 2051, 2584, 2908 |
| SpeI | ACTAGT | 1 cut(s) | 2827 |
| SspDI | GGCGCC | 1 cut(s) | 97 |
| SspI | AATATT | 1 cut(s) | 953 |
| StyD4I | CCNGG | 5 cut(s) | 273, 2211, 2386, 2894, 3430 |
| StyI | CCWWGG | 2 cut(s) | 315, 3060 |
| TaaI | ACNGT | 9 cut(s) | 530, 709, 925, 1342, 1750, 1908, 2938, 3353, 3450 |
| TaiI | ACGT | 2 cut(s) | 2516, 3268 |
| TaqI | TCGA | 8 cut(s) | 150, 210, 335, 983, 2140, 2413, 2790, 2909 |
| TaqII | GACCGA | 1 cut(s) | 875 |
| TatI | WGTACW | 5 cut(s) | 817, 2047, 2144, 2824, 3224 |
| TauI | GCSGC | 5 cut(s) | 103, 131, 134, 194, 295 |
| TfiI | GAWTC | 7 cut(s) | 449, 980, 1000, 2015, 2440, 2522, 3101 |
| TscAI | CASTG | 6 cut(s) | 571, 1913, 2272, 2665, 2694, 2887 |
| TseFI | GTSAC | 6 cut(s) | 549, 1457, 2509, 2878, 2932, 3412 |
| TseI | GCWGC | 8 cut(s) | 103, 251, 256, 466, 935, 1058, 1814, 2773 |
| Tsp45I | GTSAC | 6 cut(s) | 549, 1457, 2509, 2878, 2932, 3412 |
| TspGWI | ACGGA | 3 cut(s) | 248, 478, 2628 |
| TspRI | CASTG | 6 cut(s) | 571, 1913, 2272, 2665, 2694, 2887 |
| Vha464I | CTTAAG | 1 cut(s) | 2051 |
| VspI | ATTAAT | 1 cut(s) | 2630 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1026 |
| XapI | RAATTY | 3 cut(s) | 1684, 2084, 2310 |
| XbaI | TCTAGA | 2 cut(s) | 670, 2314 |
| XceI | RCATGY | 5 cut(s) | 220, 688, 800, 1103, 1758 |
| XhoI | CTCGAG | 1 cut(s) | 2908 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2036 |
| ZrmI | AGTACT | 5 cut(s) | 819, 2049, 2146, 2826, 3226 |
| Zsp2I | ATGCAT | 2 cut(s) | 1180, 1743 |