Rh3DG171300

BTB POZ domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
15043922 .. 15047255
3334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG171300.1

Sequence Viewer

Length: 1452 bp
ATGTTTATGGCAGATTCTGATCTCCAGTATATCTCCGAATTCTTAGTCTCCTTACAATACCTCAACCTTAGAGGGTGTATTTCATTAACTGATGTCGGCATAGCAAGTCTTCTTCTCAAATGTCCCAAGCTACATTCAGTTTTAGTTTGCGATACTTCTTTTGGGATAAATTCGGTACTAGCTCTTTGTTCTAGCCCTTCAGATTATATTGCTGGCCAACATATAGAAAATAAGCATTTGGATCCCCTGGCATTTAATCTTCAGGCACTTCATATGGGTGGCTGCAAGTGTGTTGAAGAAGAATCTATTCTAAAGATTATGTCTCAAGTGCAAAAGCTGAAGACTCTCTGCTTGCGCGATACCAACCTAGATGATAGTGCTCTATGTAGGTTTGGAGGTTCATCCTTGGAGATGCTTGACGTTTCTAGTACTAGGGTTTCGCAAGCTGCTTTAGCTCATCTTGTTGGTAGAAATCCAGGTTTGAAGTGTTTGAAACTGAGAGGCTGTAGAAATTTGTCTCAACAAGAATGTGACACTCAAAATGGAGAATTTTCTTCAGCCTATTCCTGCAGAGAACTACATAATACAATTGGAAGAACTCTTATGTTGGAAGAAATAGCACTTGGATGGGGATTTTCTTATTTCTCTTTGGAAGCACTGAAACCTGCAATCTCATCACTGAGGAAAATAACAGTGGGCTTAGGTGGATCATTAGGTGAAGACACACTGGGAAGACTACCAAATATTTGTCCTATGCTTGAGTCTATTGTTCTTTACTTTCAGGTGTTATCTGATAGCATCATTATGAAAATTATGGCAAACCTGAAGAACTTGCTAGTATTGGCTTTGTGTTACTGTCTTGGTGATATTTCTATTGTAAGCTTCAAGTTTTGTATCCCAAACCTGAGGAAGTTGAAGCTTGAGCGGGTGACCCCTTGGATGACGAACAATGATTTGGTTATTCTTACTAAAAGCTGTGTGAATCTAATTGAGCTTTCATTGCTAGGGTGCACACTTCTCAATTCAGAGTCTCAACAAATAATCTCACATGGATGGCCAGGCTTGGTTTCTATTCATCTCGAGGAATGTGGAGAAATGACAACTAAAGGGGTTTCTTTTCTTCTTGACTGTAAAGCTCTTGAAGATCTCGTGCTGCGTCATAATGGTCCTGGGATAAAGAGAAGCTTTATTTCCGATGCTGCTTCAAAGTTGCCACTGCTTAGGAAGGTATCATTAGATTTGTGTGATGCAAGTGAAGGTGAATTTGATATTCCTGATTATGCTGACAGATATTTTCTAAGTACTGTGAAGATCGCTAGATGTAAGTCTCAGAGGTACGGTCTGGAGGTTCAGTTTGTCGAGGCTCATAGGAGGCCTGTGCACAAAGAAACACTTGTGCTGGTGTGGAACAGCAAAACTATCATTAGAACAGTGGTAAAGGAAAGACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

483

Amino Acids

53.58

Weight (kDa)

7.09

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 673
AccBSI CCGCTC 1 cut(s) 925
AccII CGCG 1 cut(s) 357
AciI CCGC 1 cut(s) 925
AclWI GGATC 3 cut(s) 236, 249, 715
AcoI YGGCCR 2 cut(s) 214, 1055
AcsI RAATTY 5 cut(s) 38, 169, 511, 548, 1262
AcuI CTGAAG 5 cut(s) 183, 245, 359, 540, 845
AfaI GTAC 4 cut(s) 177, 430, 1303, 1337
AgsI TTSAA 7 cut(s) 296, 484, 493, 886, 916, 1142, 1206
AjnI CCWGG 4 cut(s) 246, 475, 1057, 1168
AjuI GAANNNNNNNTTGG 4 cut(s) 606, 638, 938, 970
Alw21I GWGCWC 3 cut(s) 382, 1013, 1383
Alw26I GTCTC 5 cut(s) 52, 327, 522, 1035, 1332
Alw44I GTGCAC 2 cut(s) 1009, 1379
AlwI GGATC 3 cut(s) 236, 249, 715
AlwNI CAGNNNCTG 1 cut(s) 17
Ama87I CYCGRG 1 cut(s) 1079
AoxI GGCC 3 cut(s) 214, 1055, 1373
ApaLI GTGCAC 2 cut(s) 1009, 1379
ApeKI GCWGC 4 cut(s) 282, 446, 1153, 1199
ApoI RAATTY 5 cut(s) 38, 169, 511, 548, 1262
ArsI GACNNNNNNTTYG 2 cut(s) 30, 62
Asp700I GAANNNNTTC 1 cut(s) 306
AspLEI GCGC 1 cut(s) 357
AspS9I GGNCC 1 cut(s) 1166
AsuHPI GGTGA 4 cut(s) 728, 875, 940, 1271
AvaI CYCGRG 1 cut(s) 1079
AvaII GGWCC 1 cut(s) 1166
AxyI CCTNAGG 1 cut(s) 905
BaeGI GKGCMC 2 cut(s) 1013, 1383
BalI TGGCCA 2 cut(s) 216, 1057
BamHI GGATCC 1 cut(s) 241
BauI CACGAG 1 cut(s) 1148
BbsI GAAGAC 4 cut(s) 101, 347, 726, 739
Bbv12I GWGCWC 3 cut(s) 382, 1013, 1383
BbvI GCAGC 4 cut(s) 269, 433, 1140, 1186
BccI CCATC 2 cut(s) 621, 1047
BciT130I CCWGG 4 cut(s) 248, 477, 1059, 1170
BciVI GTATCC 1 cut(s) 905
BcoDI GTCTC 5 cut(s) 52, 327, 522, 1035, 1332
BfaI CTAG 8 cut(s) 179, 192, 368, 426, 432, 836, 1004, 1317
BfmI CTRYAG 2 cut(s) 505, 568
BfuAI ACCTGC 1 cut(s) 673
BfuI GTATCC 1 cut(s) 905
BglII AGATCT 1 cut(s) 1144
BisI GCNGC 4 cut(s) 283, 447, 1154, 1200
BlsI GCNGC 4 cut(s) 284, 448, 1155, 1201
BmcAI AGTACT 2 cut(s) 430, 1303
Bme1390I CCNGG 4 cut(s) 248, 477, 1059, 1170
Bme18I GGWCC 1 cut(s) 1166
BmeT110I CYCGRG 1 cut(s) 1079
BmgT120I GGNCC 1 cut(s) 1166
BmiI GGNNCC 1 cut(s) 243
BmrFI CCNGG 4 cut(s) 248, 477, 1059, 1170
BmrI ACTGGG 1 cut(s) 737
BmsI GCATC 4 cut(s) 402, 807, 1186, 1237
BmuI ACTGGG 1 cut(s) 737
BpiI GAAGAC 4 cut(s) 101, 347, 726, 739
BpmI CTGGAG 2 cut(s) 8, 1364
Bpu10I CCTNAGC 2 cut(s) 700, 1220
BpuEI CTTGAG 3 cut(s) 309, 779, 941
BsaBI GATNNNNATC 1 cut(s) 18
BsaJI CCNNGG 4 cut(s) 246, 405, 935, 1169
BsaXI ACNNNNNCTCC 2 cut(s) 1337, 1367
Bse1I ACTGG 2 cut(s) 25, 732
Bse21I CCTNAGG 1 cut(s) 905
Bse3DI GCAATG 1 cut(s) 998
Bse8I GATNNNNATC 1 cut(s) 18
BseBI CCWGG 4 cut(s) 248, 477, 1059, 1170
BseDI CCNNGG 4 cut(s) 246, 405, 935, 1169
BseGI GGATG 4 cut(s) 401, 632, 945, 1058
BseJI GATNNNNATC 1 cut(s) 18
BseMI GCAATG 1 cut(s) 998
BseMII CTCAG 4 cut(s) 488, 671, 896, 1343
BseNI ACTGG 2 cut(s) 25, 732
BseSI GKGCMC 2 cut(s) 1013, 1383
BseXI GCAGC 4 cut(s) 269, 433, 1140, 1186
Bsh1236I CGCG 1 cut(s) 357
BshFI GGCC 3 cut(s) 216, 1057, 1375
BsiHKAI GWGCWC 3 cut(s) 382, 1013, 1383
BsiHKCI CYCGRG 1 cut(s) 1079
BslFI GGGAC 1 cut(s) 108
BsmAI GTCTC 5 cut(s) 52, 327, 522, 1035, 1332
BsmFI GGGAC 1 cut(s) 108
BsnI GGCC 3 cut(s) 216, 1057, 1375
BsoBI CYCGRG 1 cut(s) 1079
Bsp1286I GDGCHC 3 cut(s) 382, 1013, 1383
Bsp143I GATC 5 cut(s) 19, 241, 707, 1144, 1311
BspACI CCGC 1 cut(s) 925
BspANI GGCC 3 cut(s) 216, 1057, 1375
BspCNI CTCAG 4 cut(s) 489, 672, 897, 1342
BspFNI CGCG 1 cut(s) 357
BspLI GGNNCC 1 cut(s) 243
BspMAI CTGCAG 1 cut(s) 572
BspMI ACCTGC 1 cut(s) 673
BspPI GGATC 3 cut(s) 236, 249, 715
BsrBI CCGCTC 1 cut(s) 925
BsrDI GCAATG 1 cut(s) 998
BsrI ACTGG 2 cut(s) 25, 732
BssECI CCNNGG 4 cut(s) 246, 405, 935, 1169
BssMI GATC 5 cut(s) 19, 241, 707, 1144, 1311
BssSI CACGAG 1 cut(s) 1148
BssT1I CCWWGG 2 cut(s) 405, 935
Bst2BI CACGAG 1 cut(s) 1148
Bst2UI CCWGG 4 cut(s) 248, 477, 1059, 1170
Bst4CI ACNGT 6 cut(s) 694, 857, 1130, 1306, 1340, 1432
BstC8I GCNNGC 3 cut(s) 214, 353, 444
BstDEI CTNAG 9 cut(s) 43, 68, 497, 680, 700, 905, 1220, 1298, 1329
BstEII GGTNACC 1 cut(s) 928
BstF5I GGATG 4 cut(s) 401, 632, 945, 1058
BstFNI CGCG 1 cut(s) 357
BstHHI GCGC 1 cut(s) 357
BstKTI GATC 5 cut(s) 22, 244, 710, 1147, 1314
BstMAI GTCTC 5 cut(s) 52, 327, 522, 1035, 1332
BstMBI GATC 5 cut(s) 19, 241, 707, 1144, 1311
BstMWI GCNNNNNNNGC 2 cut(s) 452, 1000
BstNI CCWGG 4 cut(s) 248, 477, 1059, 1170
BstPI GGTNACC 1 cut(s) 928
BstSCI CCNGG 4 cut(s) 246, 475, 1057, 1168
BstSFI CTRYAG 2 cut(s) 505, 568
BstSLI GKGCMC 2 cut(s) 1013, 1383
BstUI CGCG 1 cut(s) 357
BstV1I GCAGC 4 cut(s) 269, 433, 1140, 1186
BstV2I GAAGAC 4 cut(s) 101, 347, 726, 739
BstX2I RGATCY 2 cut(s) 241, 1144
BstYI RGATCY 2 cut(s) 241, 1144
Bsu36I CCTNAGG 1 cut(s) 905
BsuI GTATCC 1 cut(s) 905
BsuRI GGCC 3 cut(s) 216, 1057, 1375
BtsCI GGATG 4 cut(s) 401, 632, 945, 1058
BtsI GCAGTG 1 cut(s) 1214
BtsIMutI CAGTG 6 cut(s) 656, 677, 699, 725, 1214, 1437
BveI ACCTGC 1 cut(s) 673
Cac8I GCNNGC 3 cut(s) 214, 353, 444
CaiI CAGNNNCTG 1 cut(s) 17
CfoI GCGC 1 cut(s) 357
Cfr13I GGNCC 1 cut(s) 1166
CseI GACGC 1 cut(s) 1145
Csp6I GTAC 4 cut(s) 176, 429, 1302, 1336
CviAII CATG 1 cut(s) 1049
CviQI GTAC 4 cut(s) 176, 429, 1302, 1336
DdeI CTNAG 9 cut(s) 43, 68, 497, 680, 700, 905, 1220, 1298, 1329
DpnI GATC 5 cut(s) 21, 243, 709, 1146, 1313
DpnII GATC 5 cut(s) 19, 241, 707, 1144, 1311
EaeI YGGCCR 2 cut(s) 214, 1055
Eco130I CCWWGG 2 cut(s) 405, 935
Eco147I AGGCCT 1 cut(s) 1375
Eco47I GGWCC 1 cut(s) 1166
Eco57I CTGAAG 5 cut(s) 183, 245, 359, 540, 845
Eco81I CCTNAGG 1 cut(s) 905
Eco88I CYCGRG 1 cut(s) 1079
Eco91I GGTNACC 1 cut(s) 928
EcoO65I GGTNACC 1 cut(s) 928
EcoRI GAATTC 1 cut(s) 38
EcoRII CCWGG 4 cut(s) 246, 475, 1057, 1168
EcoT14I CCWWGG 2 cut(s) 405, 935
ErhI CCWWGG 2 cut(s) 405, 935
FaeI CATG 1 cut(s) 1052
FalI AAGNNNNNCTT 4 cut(s) 1169, 1201, 1377, 1409
FaqI GGGAC 1 cut(s) 108
FatI CATG 1 cut(s) 1048
FauI CCCGC 1 cut(s) 918
FauNDI CATATG 1 cut(s) 273
Fnu4HI GCNGC 4 cut(s) 283, 447, 1154, 1200
FokI GGATG 4 cut(s) 388, 639, 952, 1065
Fsp4HI GCNGC 4 cut(s) 283, 447, 1154, 1200
FspBI CTAG 8 cut(s) 179, 192, 368, 426, 432, 836, 1004, 1317
GlaI GCGC 1 cut(s) 356
GluI GCNGC 4 cut(s) 283, 447, 1154, 1200
GsuI CTGGAG 2 cut(s) 8, 1364
HaeIII GGCC 3 cut(s) 216, 1057, 1375
HgaI GACGC 1 cut(s) 1145
HhaI GCGC 1 cut(s) 357
Hin1II CATG 1 cut(s) 1052
Hin6I GCGC 1 cut(s) 355
HinP1I GCGC 1 cut(s) 355
HindIII AAGCTT 3 cut(s) 880, 917, 1183
HinfI GANTC 7 cut(s) 14, 302, 343, 761, 982, 1028, 1446
HphI GGTGA 4 cut(s) 728, 875, 940, 1271
Hpy166II GTNNAC 2 cut(s) 1011, 1381
Hpy188I TCNGA 7 cut(s) 19, 37, 202, 793, 1027, 1195, 1332
Hpy188III TCNNGA 5 cut(s) 1079, 1124, 1139, 1274, 1343
Hpy8I GTNNAC 2 cut(s) 1011, 1381
HpyAV CCTTC 3 cut(s) 207, 1219, 1250
HpyCH4III ACNGT 6 cut(s) 694, 857, 1130, 1306, 1340, 1432
HpyCH4IV ACGT 1 cut(s) 420
HpyCH4V TGCA 7 cut(s) 285, 331, 570, 668, 1011, 1250, 1381
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 1000
HpyF3I CTNAG 9 cut(s) 43, 68, 497, 680, 700, 905, 1220, 1298, 1329
HpySE526I ACGT 1 cut(s) 420
Hsp92II CATG 1 cut(s) 1052
HspAI GCGC 1 cut(s) 355
Kzo9I GATC 5 cut(s) 19, 241, 707, 1144, 1311
Lsp1109I GCAGC 4 cut(s) 269, 433, 1140, 1186
LweI GCATC 4 cut(s) 402, 807, 1186, 1237
MaeI CTAG 8 cut(s) 179, 192, 368, 426, 432, 836, 1004, 1317
MaeII ACGT 1 cut(s) 420
MaeIII GTNAC 3 cut(s) 530, 851, 928
MalI GATC 5 cut(s) 21, 243, 709, 1146, 1313
MbiI CCGCTC 1 cut(s) 925
MboI GATC 5 cut(s) 19, 241, 707, 1144, 1311
MfeI CAATTG 1 cut(s) 588
MflI RGATCY 2 cut(s) 241, 1144
MhlI GDGCHC 3 cut(s) 382, 1013, 1383
MlsI TGGCCA 2 cut(s) 216, 1057
MluCI AATT 9 cut(s) 38, 169, 511, 548, 588, 810, 987, 1021, 1262
MluNI TGGCCA 2 cut(s) 216, 1057
MlyI GAGTC 4 cut(s) 337, 770, 1037, 1440
MmeI TCCRAC 1 cut(s) 588
Mox20I TGGCCA 2 cut(s) 216, 1057
MroXI GAANNNNTTC 1 cut(s) 306
MscI TGGCCA 2 cut(s) 216, 1057
MseI TTAA 2 cut(s) 86, 255
MslI CAYNNNNRTG 4 cut(s) 276, 625, 803, 1051
Msp20I TGGCCA 2 cut(s) 216, 1057
MspR9I CCNGG 4 cut(s) 248, 477, 1059, 1170
MunI CAATTG 1 cut(s) 588
MvaI CCWGG 4 cut(s) 248, 477, 1059, 1170
MvnI CGCG 1 cut(s) 357
MwoI GCNNNNNNNGC 2 cut(s) 452, 1000
NdeI CATATG 1 cut(s) 273
NdeII GATC 5 cut(s) 19, 241, 707, 1144, 1311
NlaIII CATG 1 cut(s) 1052
NlaIV GGNNCC 1 cut(s) 243
NmuCI GTSAC 2 cut(s) 530, 928
PaeR7I CTCGAG 1 cut(s) 1079
PceI AGGCCT 1 cut(s) 1375
PdmI GAANNNNTTC 1 cut(s) 306
PfeI GAWTC 3 cut(s) 14, 302, 982
PkrI GCNGC 4 cut(s) 284, 448, 1155, 1201
PleI GAGTC 4 cut(s) 337, 769, 1036, 1440
PpsI GAGTC 4 cut(s) 337, 769, 1036, 1440
Psp6I CCWGG 4 cut(s) 246, 475, 1057, 1168
PspEI GGTNACC 1 cut(s) 928
PspGI CCWGG 4 cut(s) 246, 475, 1057, 1168
PspN4I GGNNCC 1 cut(s) 243
PspPI GGNCC 1 cut(s) 1166
PstI CTGCAG 1 cut(s) 572
PstNI CAGNNNCTG 1 cut(s) 17
PsuI RGATCY 2 cut(s) 241, 1144
RsaI GTAC 4 cut(s) 177, 430, 1303, 1337
RsaNI GTAC 4 cut(s) 176, 429, 1302, 1336
RseI CAYNNNNRTG 4 cut(s) 276, 625, 803, 1051
SaqAI TTAA 2 cut(s) 86, 255
SatI GCNGC 4 cut(s) 283, 447, 1154, 1200
Sau3AI GATC 5 cut(s) 19, 241, 707, 1144, 1311
Sau96I GGNCC 1 cut(s) 1166
ScaI AGTACT 2 cut(s) 430, 1303
SchI GAGTC 4 cut(s) 337, 770, 1037, 1440
ScrFI CCNGG 4 cut(s) 248, 477, 1059, 1170
SduI GDGCHC 3 cut(s) 382, 1013, 1383
SfaNI GCATC 4 cut(s) 402, 807, 1186, 1237
SfcI CTRYAG 2 cut(s) 505, 568
Sfr274I CTCGAG 1 cut(s) 1079
SinI GGWCC 1 cut(s) 1166
SlaI CTCGAG 1 cut(s) 1079
SmiMI CAYNNNNRTG 4 cut(s) 276, 625, 803, 1051
SmlI CTYRAG 4 cut(s) 324, 758, 920, 1079
SmoI CTYRAG 4 cut(s) 324, 758, 920, 1079
Sse9I AATT 9 cut(s) 38, 169, 511, 548, 588, 810, 987, 1021, 1262
SseBI AGGCCT 1 cut(s) 1375
SsiI CCGC 1 cut(s) 925
SspI AATATT 1 cut(s) 745
SspMI CTAG 8 cut(s) 179, 192, 368, 426, 432, 836, 1004, 1317
StuI AGGCCT 1 cut(s) 1375
StyD4I CCNGG 4 cut(s) 246, 475, 1057, 1168
StyI CCWWGG 2 cut(s) 405, 935
TaaI ACNGT 6 cut(s) 694, 857, 1130, 1306, 1340, 1432
TaiI ACGT 1 cut(s) 423
TaqI TCGA 2 cut(s) 1080, 1359
TasI AATT 9 cut(s) 38, 169, 511, 548, 588, 810, 987, 1021, 1262
TatI WGTACW 2 cut(s) 428, 1301
TfiI GAWTC 3 cut(s) 14, 302, 982
Tru1I TTAA 2 cut(s) 86, 255
Tru9I TTAA 2 cut(s) 86, 255
TscAI CASTG 6 cut(s) 663, 684, 699, 732, 1221, 1437
TseFI GTSAC 2 cut(s) 530, 928
TseI GCWGC 4 cut(s) 282, 446, 1153, 1199
Tsp45I GTSAC 2 cut(s) 530, 928
TspDTI ATGAA 6 cut(s) 72, 260, 390, 821, 987, 1064
TspRI CASTG 6 cut(s) 663, 684, 699, 732, 1221, 1437
VneI GTGCAC 2 cut(s) 1009, 1379
VpaK11BI GGWCC 1 cut(s) 1166
XapI RAATTY 5 cut(s) 38, 169, 511, 548, 1262
XhoI CTCGAG 1 cut(s) 1079
XmnI GAANNNNTTC 1 cut(s) 306
XspI CTAG 8 cut(s) 179, 192, 368, 426, 432, 836, 1004, 1317
ZrmI AGTACT 2 cut(s) 430, 1303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.