Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000593.1_g000002 Rmu_sc0007790.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00123800 Rroxscaffold_2G00123890 |
| rosa_samantha | Rh3DG236800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 128 |
| AccI | GTMKAC | 1 cut(s) | 138 |
| AciI | CCGC | 1 cut(s) | 92 |
| AgsI | TTSAA | 1 cut(s) | 212 |
| AluBI | AGCT | 2 cut(s) | 146, 208 |
| AluI | AGCT | 2 cut(s) | 146, 208 |
| AsuC2I | CCSGG | 1 cut(s) | 126 |
| BanI | GGYRCC | 1 cut(s) | 128 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 192, 224 |
| BccI | CCATC | 1 cut(s) | 59 |
| BcnI | CCSGG | 1 cut(s) | 126 |
| BfaI | CTAG | 1 cut(s) | 164 |
| Bme1390I | CCNGG | 1 cut(s) | 126 |
| BmiI | GGNNCC | 1 cut(s) | 130 |
| BmrFI | CCNGG | 1 cut(s) | 126 |
| BpuMI | CCSGG | 1 cut(s) | 126 |
| BsaAI | YACGTR | 1 cut(s) | 221 |
| BsaJI | CCNNGG | 1 cut(s) | 30 |
| BseDI | CCNNGG | 1 cut(s) | 30 |
| BseMII | CTCAG | 1 cut(s) | 147 |
| BshNI | GGYRCC | 1 cut(s) | 128 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| Bsp143I | GATC | 1 cut(s) | 58 |
| BspACI | CCGC | 1 cut(s) | 92 |
| BspCNI | CTCAG | 1 cut(s) | 146 |
| BspLI | GGNNCC | 1 cut(s) | 130 |
| BspQI | GCTCTTC | 1 cut(s) | 195 |
| BspT107I | GGYRCC | 1 cut(s) | 128 |
| BssECI | CCNNGG | 1 cut(s) | 30 |
| BssMI | GATC | 1 cut(s) | 58 |
| BssNAI | GTATAC | 1 cut(s) | 139 |
| BssT1I | CCWWGG | 1 cut(s) | 30 |
| Bst1107I | GTATAC | 1 cut(s) | 139 |
| Bst6I | CTCTTC | 1 cut(s) | 195 |
| BstBAI | YACGTR | 1 cut(s) | 221 |
| BstC8I | GCNNGC | 1 cut(s) | 160 |
| BstDEI | CTNAG | 2 cut(s) | 133, 152 |
| BstKTI | GATC | 1 cut(s) | 61 |
| BstMBI | GATC | 1 cut(s) | 58 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 121 |
| BstSCI | CCNGG | 1 cut(s) | 124 |
| BstZ17I | GTATAC | 1 cut(s) | 139 |
| Cac8I | GCNNGC | 1 cut(s) | 160 |
| CviAII | CATG | 2 cut(s) | 112, 170 |
| CviJI | RGCY | 5 cut(s) | 74, 98, 124, 146, 208 |
| CviKI_1 | RGCY | 5 cut(s) | 74, 98, 124, 146, 208 |
| DdeI | CTNAG | 2 cut(s) | 133, 152 |
| DpnI | GATC | 1 cut(s) | 60 |
| DpnII | GATC | 1 cut(s) | 58 |
| Eam1104I | CTCTTC | 1 cut(s) | 195 |
| EarI | CTCTTC | 1 cut(s) | 195 |
| Eco130I | CCWWGG | 1 cut(s) | 30 |
| EcoT14I | CCWWGG | 1 cut(s) | 30 |
| ErhI | CCWWGG | 1 cut(s) | 30 |
| FaeI | CATG | 2 cut(s) | 115, 173 |
| FaiI | YATR | 4 cut(s) | 45, 113, 139, 171 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 135, 167 |
| FatI | CATG | 2 cut(s) | 111, 169 |
| FblI | GTMKAC | 1 cut(s) | 138 |
| FspBI | CTAG | 1 cut(s) | 164 |
| HapII | CCGG | 1 cut(s) | 125 |
| Hin1II | CATG | 2 cut(s) | 115, 173 |
| HindIII | AAGCTT | 1 cut(s) | 206 |
| HpaII | CCGG | 1 cut(s) | 125 |
| Hpy166II | GTNNAC | 1 cut(s) | 139 |
| Hpy8I | GTNNAC | 1 cut(s) | 139 |
| HpyAV | CCTTC | 2 cut(s) | 92, 109 |
| HpyCH4IV | ACGT | 1 cut(s) | 220 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 121 |
| HpyF3I | CTNAG | 2 cut(s) | 133, 152 |
| HpySE526I | ACGT | 1 cut(s) | 220 |
| Hsp92II | CATG | 2 cut(s) | 115, 173 |
| Kzo9I | GATC | 1 cut(s) | 58 |
| LguI | GCTCTTC | 1 cut(s) | 195 |
| LmnI | GCTCC | 1 cut(s) | 37 |
| LpnPI | CCDG | 3 cut(s) | 33, 60, 138 |
| MaeI | CTAG | 1 cut(s) | 164 |
| MaeII | ACGT | 1 cut(s) | 220 |
| MaeIII | GTNAC | 1 cut(s) | 199 |
| MalI | GATC | 1 cut(s) | 60 |
| MboI | GATC | 1 cut(s) | 58 |
| MboII | GAAGA | 1 cut(s) | 182 |
| MnlI | CCTC | 1 cut(s) | 142 |
| MspI | CCGG | 1 cut(s) | 125 |
| MspR9I | CCNGG | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 121 |
| NciI | CCSGG | 1 cut(s) | 126 |
| NdeII | GATC | 1 cut(s) | 58 |
| NlaIII | CATG | 2 cut(s) | 115, 173 |
| NlaIV | GGNNCC | 1 cut(s) | 130 |
| PciSI | GCTCTTC | 1 cut(s) | 195 |
| Ppu21I | YACGTR | 1 cut(s) | 221 |
| PspN4I | GGNNCC | 1 cut(s) | 130 |
| SapI | GCTCTTC | 1 cut(s) | 195 |
| Sau3AI | GATC | 1 cut(s) | 58 |
| ScrFI | CCNGG | 1 cut(s) | 126 |
| SetI | ASST | 5 cut(s) | 36, 84, 148, 210, 223 |
| SsiI | CCGC | 1 cut(s) | 92 |
| SspMI | CTAG | 1 cut(s) | 164 |
| StyD4I | CCNGG | 1 cut(s) | 124 |
| StyI | CCWWGG | 1 cut(s) | 30 |
| TaiI | ACGT | 1 cut(s) | 223 |
| TspDTI | ATGAA | 1 cut(s) | 158 |
| XmiI | GTMKAC | 1 cut(s) | 138 |
| XspI | CTAG | 1 cut(s) | 164 |