Rh4AG131200

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0013529
Physical Location & Seq
Reverse (-)
28453338 .. 28460204
6867 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG131200.1

Sequence Viewer

Length: 1419 bp
ATGCCGGACCTCGCGAATCTCTCTATCTCGGATTCTCCGACCGTCACTCACTGCCCTAACATCAAATCCCACTCGGCCACAACAGAGAGCTCGGTCAAAACCCTAGCGTTTGACCGCGACTGCGACCAGAGGACGATGGGGTTCGCGACTCTGCACAACGCCAACGGTGCTGGAAGTTCCAATTGCAAGAGTTTGGAGGACCATGTCAGGCATTGGGTCACCCACAGAATGGAATCGGGGATTCCCGAGACCCGCAGCTCATTGCCTTTCCTTTGCGGTGCGAAGACATTGGCCGAGTGCCTTGTTTGCCATAATTTTGTATGCCCTGGGGAGGAGATCTTATGCTCTGTTCGTGGCTGTCAAGGACTCTATCACCGGGAATGTGTGAAGGAAAGGCCTGGGATCTCTAATAAGAAAAAGTTCACGTGTCCGCAACATGTATGCTTCATTTGCAGACAGAGGTTACATTGGCGGTGTGTACGTTGCACTATAGCATCGCATGATAAATGCGCACCATGGCCGGATAAAGTGATGCATTTGATAGACCGGCCAGGGAGAGCTGTTTGTTGGAGGCATCCAGCAGATTGGTGGCAGGATAGGAAGCATGCAGTTTCAGCAAGCAATATAGAGGAGGTATTCTTTCGCTTGCCTCTGCCTTACACTACTGAGGAGTTCAAGATTGACCCAACTTGGAAACACACGGAGAACAATATAGAGCCTCCTCCATATACGCACATCAGGCGTAATATTTACCTAGTCAAGAAGAAGCGAGATGATGTTGATGATGATATTGGATGCAGAGGTTGCACTTCTGTATGCTCTCTGGATTGTGTTTGCAGGGTTCAATGCATAAGCTGTTCAAAGGCTTGCCATTGTTCTGAAAATTGTACAAACCGTCCATTTCTGAAGGAGAAGAAGATCAGAATCGTCAAGACCGCACACTGTGGTTGGGGAGCAGAGGCAGCTGAGTCGGTTAAGAAAGGGGATTTCATAATCGAGTATATTGGGGAAGTTATTAATGATGCGTTGTGCGAACAAAGGCTTTGGGACATGAAATACAAAGAAGTGAAGAATTTCTATATGTGTGAAATTCGAAAAGACTTCACAATCGACGCTACTTTTAAAGGAAATCCATCACGATTTCTAAATCACAGCTGTGATCCGAACTGCATCCTTGAAAAGTGGCAAGTTGAGGGGGAAACACGTGTTGGTGTGTTTGCTGCAAGATCAATAGAAGTCAGAGAGCCATTAACATATGATTATAGATTTGTGCAATTTGGACCTGAGGTGAAGTGCTGTTGCGGTGCATCAAATTGTCAAGGCTATCTTGGCATCAAGAAAAAGATTTGTAAGGTGGATCTTTTCTGGGGGAAGAAACGCAAGAGAACACCAACTGCTTGCATAGCTATCCTTAGGTGA

Protein Analysis

472

Amino Acids

53.99

Weight (kDa)

8.66

Isoelectric Point (pI)

48.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_NSD PF22908 99 - 146 8.1e-06 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger
SET PF00856 316 - 421 9.6e-23 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013529)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G30860
fragaria_vesca FvH4_4g08820 FvH4_4g08820
malus_domestica MD16G1258900.v1.1
prunus_persica Prupe.1G101500_v2.0.a1 Prupe.1G101500_v2.0.a1 Prupe.1G101500_v2.0.a1
pyrus_communis pycom16g22640
rosa_chinensis RchiOBHm_Chr4g0405361
rosa_laevigata RLG00000008848
rosa_multiflora Rmu_sc0000161.1_g000080
rosa_roxburghii Rroxscaffold_5G00349790
rosa_rugosa Rorug04G0057700
rosa_samantha Rh4AG131200 Rh4BG125800 Rh4CG138100 Rh4DG125200
rosa_wichuraiana Rw4G010630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 511
AccB7I CCANNNNNTGG 1 cut(s) 229
AccII CGCG 3 cut(s) 14, 117, 146
AciI CCGC 7 cut(s) 115, 253, 276, 431, 472, 936, 1302
AclWI GGATC 3 cut(s) 410, 1154, 1365
AcoI YGGCCR 4 cut(s) 75, 291, 518, 548
AcsI RAATTY 2 cut(s) 1072, 1089
AcuI CTGAAG 1 cut(s) 926
AcvI CACGTG 2 cut(s) 426, 1205
AdeI CACNNNGTG 1 cut(s) 944
AfaI GTAC 2 cut(s) 480, 889
AfiI CCNNNNNNNGG 2 cut(s) 229, 331
AflIII ACRYGT 4 cut(s) 425, 436, 1202, 1204
AgsI TTSAA 4 cut(s) 676, 845, 861, 1178
AjnI CCWGG 3 cut(s) 325, 397, 550
AjuI GAANNNNNNNTTGG 2 cut(s) 1191, 1223
AleI CACNNNNGTG 1 cut(s) 1155
AluBI AGCT 7 cut(s) 90, 258, 560, 855, 965, 1155, 1406
AluI AGCT 7 cut(s) 90, 258, 560, 855, 965, 1155, 1406
Alw21I GWGCWC 1 cut(s) 92
Alw26I GTCTC 1 cut(s) 242
AlwI GGATC 3 cut(s) 410, 1154, 1365
Ama87I CYCGRG 1 cut(s) 245
AoxI GGCC 5 cut(s) 75, 291, 395, 518, 548
ApeKI GCWGC 3 cut(s) 255, 962, 1220
ApoI RAATTY 2 cut(s) 1072, 1089
AseI ATTAAT 1 cut(s) 1017
Asp700I GAANNNNTTC 2 cut(s) 419, 1073
AspLEI GCGC 1 cut(s) 512
AspS9I GGNCC 3 cut(s) 7, 199, 1280
AsuC2I CCSGG 1 cut(s) 377
AsuHPI GGTGA 3 cut(s) 211, 365, 1300
AsuII TTCGAA 1 cut(s) 1093
AvaI CYCGRG 1 cut(s) 245
AvaII GGWCC 3 cut(s) 7, 199, 1280
AxyI CCTNAGG 2 cut(s) 1284, 1412
BanII GRGCYC 1 cut(s) 92
BbrPI CACGTG 2 cut(s) 426, 1205
BbsI GAAGAC 1 cut(s) 290
Bbv12I GWGCWC 1 cut(s) 92
BbvI GCAGC 3 cut(s) 267, 974, 1207
BccI CCATC 2 cut(s) 130, 1141
BcgI CGANNNNNNTGC 2 cut(s) 951, 985
BciT130I CCWGG 3 cut(s) 327, 399, 552
BcnI CCSGG 1 cut(s) 377
BcoDI GTCTC 1 cut(s) 242
BfaI CTAG 2 cut(s) 104, 755
BfmI CTRYAG 1 cut(s) 489
BglII AGATCT 1 cut(s) 336
BisI GCNGC 3 cut(s) 256, 963, 1221
BlsI GCNGC 3 cut(s) 257, 964, 1222
Bme1390I CCNGG 4 cut(s) 327, 377, 399, 552
Bme18I GGWCC 3 cut(s) 7, 199, 1280
BmeT110I CYCGRG 1 cut(s) 245
BmgT120I GGNCC 3 cut(s) 7, 199, 1280
BmrFI CCNGG 4 cut(s) 327, 377, 399, 552
BmsI GCATC 8 cut(s) 503, 522, 583, 785, 1012, 1179, 1316, 1341
BpiI GAAGAC 1 cut(s) 290
Bpu14I TTCGAA 1 cut(s) 1093
BpuMI CCSGG 1 cut(s) 377
BsaAI YACGTR 2 cut(s) 426, 1205
BsaBI GATNNNNATC 1 cut(s) 923
BsaI GGTCTC 1 cut(s) 242
BsaJI CCNNGG 5 cut(s) 325, 326, 398, 515, 551
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 331
Bse118I RCCGGY 1 cut(s) 546
Bse21I CCTNAGG 2 cut(s) 1284, 1412
Bse3DI GCAATG 1 cut(s) 260
Bse8I GATNNNNATC 1 cut(s) 923
BseBI CCWGG 3 cut(s) 327, 399, 552
BseDI CCNNGG 5 cut(s) 325, 326, 398, 515, 551
BseGI GGATG 3 cut(s) 574, 800, 1170
BseJI GATNNNNATC 1 cut(s) 923
BseLI CCNNNNNNNGG 2 cut(s) 229, 331
BseMI GCAATG 1 cut(s) 260
BseMII CTCAG 3 cut(s) 657, 957, 1275
BseRI GAGGAG 4 cut(s) 347, 644, 683, 711
BseXI GCAGC 3 cut(s) 267, 974, 1207
BsgI GTGCAG 1 cut(s) 137
Bsh1236I CGCG 3 cut(s) 14, 117, 146
Bsh1285I CGRYCG 1 cut(s) 42
BshFI GGCC 5 cut(s) 77, 293, 397, 520, 550
BsiEI CGRYCG 1 cut(s) 42
BsiHKAI GWGCWC 1 cut(s) 92
BsiHKCI CYCGRG 1 cut(s) 245
BsiSI CCGG 4 cut(s) 5, 376, 521, 547
BslFI GGGAC 1 cut(s) 1061
BslI CCNNNNNNNGG 2 cut(s) 229, 331
BsmAI GTCTC 1 cut(s) 242
BsmFI GGGAC 1 cut(s) 1061
BsnI GGCC 5 cut(s) 77, 293, 397, 520, 550
Bso31I GGTCTC 1 cut(s) 242
BsoBI CYCGRG 1 cut(s) 245
Bsp119I TTCGAA 1 cut(s) 1093
Bsp1286I GDGCHC 1 cut(s) 92
Bsp1407I TGTACA 1 cut(s) 887
Bsp143I GATC 6 cut(s) 336, 402, 918, 1159, 1226, 1357
Bsp19I CCATGG 1 cut(s) 515
Bsp68I TCGCGA 2 cut(s) 14, 146
BspACI CCGC 7 cut(s) 115, 253, 276, 431, 472, 936, 1302
BspANI GGCC 5 cut(s) 77, 293, 397, 520, 550
BspCNI CTCAG 3 cut(s) 658, 958, 1276
BspFNI CGCG 3 cut(s) 14, 117, 146
BspPI GGATC 3 cut(s) 410, 1154, 1365
BspT104I TTCGAA 1 cut(s) 1093
BspTNI GGTCTC 1 cut(s) 242
BsrDI GCAATG 1 cut(s) 260
BsrFI RCCGGY 1 cut(s) 546
BsrGI TGTACA 1 cut(s) 887
BssAI RCCGGY 1 cut(s) 546
BssECI CCNNGG 5 cut(s) 325, 326, 398, 515, 551
BssMI GATC 6 cut(s) 336, 402, 918, 1159, 1226, 1357
BssT1I CCWWGG 1 cut(s) 515
Bst2UI CCWGG 3 cut(s) 327, 399, 552
Bst4CI ACNGT 4 cut(s) 43, 167, 896, 944
BstAPI GCANNNNNTGC 1 cut(s) 804
BstAUI TGTACA 1 cut(s) 887
BstBAI YACGTR 2 cut(s) 426, 1205
BstBI TTCGAA 1 cut(s) 1093
BstC8I GCNNGC 5 cut(s) 606, 619, 647, 868, 1399
BstDEI CTNAG 4 cut(s) 666, 966, 1284, 1412
BstDSI CCRYGG 1 cut(s) 515
BstEII GGTNACC 1 cut(s) 217
BstF5I GGATG 3 cut(s) 574, 800, 1170
BstFNI CGCG 3 cut(s) 14, 117, 146
BstHHI GCGC 1 cut(s) 512
BstKTI GATC 6 cut(s) 339, 405, 921, 1162, 1229, 1360
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 6 cut(s) 336, 402, 918, 1159, 1226, 1357
BstMCI CGRYCG 1 cut(s) 42
BstMWI GCNNNNNNNGC 9 cut(s) 167, 306, 450, 614, 739, 804, 962, 1329, 1403
BstNI CCWGG 3 cut(s) 327, 399, 552
BstNSI RCATGY 2 cut(s) 440, 608
BstPI GGTNACC 1 cut(s) 217
BstSCI CCNGG 4 cut(s) 325, 375, 397, 550
BstSFI CTRYAG 1 cut(s) 489
BstUI CGCG 3 cut(s) 14, 117, 146
BstV1I GCAGC 3 cut(s) 267, 974, 1207
BstV2I GAAGAC 1 cut(s) 290
BstX2I RGATCY 3 cut(s) 336, 402, 1357
BstXI CCANNNNNNTGG 1 cut(s) 585
BstYI RGATCY 3 cut(s) 336, 402, 1357
Bsu36I CCTNAGG 2 cut(s) 1284, 1412
BsuRI GGCC 5 cut(s) 77, 293, 397, 520, 550
BtgI CCRYGG 1 cut(s) 515
BtgZI GCGATG 1 cut(s) 480
BtsCI GGATG 3 cut(s) 574, 800, 1170
BtsI GCAGTG 1 cut(s) 49
BtsIMutI CAGTG 2 cut(s) 49, 940
BtuMI TCGCGA 2 cut(s) 14, 146
Cac8I GCNNGC 5 cut(s) 606, 619, 647, 868, 1399
CfoI GCGC 1 cut(s) 512
Cfr10I RCCGGY 1 cut(s) 546
Cfr13I GGNCC 3 cut(s) 7, 199, 1280
CseI GACGC 1 cut(s) 1121
Csp6I GTAC 2 cut(s) 479, 888
CviAII CATG 6 cut(s) 203, 437, 500, 516, 605, 1051
CviQI GTAC 2 cut(s) 479, 888
DdeI CTNAG 4 cut(s) 666, 966, 1284, 1412
DpnI GATC 6 cut(s) 338, 404, 920, 1161, 1228, 1359
DpnII GATC 6 cut(s) 336, 402, 918, 1159, 1226, 1357
DraI TTTAAA 1 cut(s) 1123
DraIII CACNNNGTG 1 cut(s) 944
EaeI YGGCCR 4 cut(s) 75, 291, 518, 548
Ecl136II GAGCTC 1 cut(s) 90
Eco130I CCWWGG 1 cut(s) 515
Eco147I AGGCCT 1 cut(s) 397
Eco24I GRGCYC 1 cut(s) 92
Eco31I GGTCTC 1 cut(s) 242
Eco47I GGWCC 3 cut(s) 7, 199, 1280
Eco53kI GAGCTC 1 cut(s) 90
Eco57I CTGAAG 1 cut(s) 926
Eco72I CACGTG 2 cut(s) 426, 1205
Eco81I CCTNAGG 2 cut(s) 1284, 1412
Eco88I CYCGRG 1 cut(s) 245
Eco91I GGTNACC 1 cut(s) 217
EcoICRI GAGCTC 1 cut(s) 90
EcoO65I GGTNACC 1 cut(s) 217
EcoRII CCWGG 3 cut(s) 325, 397, 550
EcoT14I CCWWGG 1 cut(s) 515
EcoT22I ATGCAT 2 cut(s) 537, 851
EcoT38I GRGCYC 1 cut(s) 92
ErhI CCWWGG 1 cut(s) 515
FaeI CATG 6 cut(s) 206, 440, 503, 519, 608, 1054
FalI AAGNNNNNCTT 2 cut(s) 1311, 1343
FaqI GGGAC 1 cut(s) 1061
FatI CATG 6 cut(s) 202, 436, 499, 515, 604, 1050
FauI CCCGC 1 cut(s) 260
FauNDI CATATG 1 cut(s) 1255
Fnu4HI GCNGC 3 cut(s) 256, 963, 1221
FokI GGATG 3 cut(s) 561, 807, 1157
FriOI GRGCYC 1 cut(s) 92
Fsp4HI GCNGC 3 cut(s) 256, 963, 1221
FspAI RTGCGCAY 1 cut(s) 511
FspBI CTAG 2 cut(s) 104, 755
FspI TGCGCA 1 cut(s) 511
GlaI GCGC 1 cut(s) 511
GluI GCNGC 3 cut(s) 256, 963, 1221
HaeIII GGCC 5 cut(s) 77, 293, 397, 520, 550
HapII CCGG 4 cut(s) 5, 376, 521, 547
HgaI GACGC 1 cut(s) 1121
HhaI GCGC 1 cut(s) 512
Hin1II CATG 6 cut(s) 206, 440, 503, 519, 608, 1054
Hin6I GCGC 1 cut(s) 510
HinP1I GCGC 1 cut(s) 510
HinfI GANTC 8 cut(s) 16, 32, 148, 233, 241, 366, 924, 968
HpaII CCGG 4 cut(s) 5, 376, 521, 547
HphI GGTGA 3 cut(s) 211, 365, 1300
Hpy166II GTNNAC 2 cut(s) 423, 479
Hpy188I TCNGA 7 cut(s) 31, 39, 880, 906, 923, 1164, 1241
Hpy188III TCNNGA 9 cut(s) 13, 145, 245, 676, 760, 824, 931, 1137, 1336
Hpy8I GTNNAC 2 cut(s) 423, 479
Hpy99I CGWCG 1 cut(s) 1115
HpyAV CCTTC 2 cut(s) 382, 901
HpyCH4III ACNGT 4 cut(s) 43, 167, 896, 944
HpyCH4IV ACGT 3 cut(s) 425, 481, 1204
HpyF10VI GCNNNNNNNGC 9 cut(s) 167, 306, 450, 614, 739, 804, 962, 1329, 1403
HpyF3I CTNAG 4 cut(s) 666, 966, 1284, 1412
HpySE526I ACGT 3 cut(s) 425, 481, 1204
Hsp92II CATG 6 cut(s) 206, 440, 503, 519, 608, 1054
HspAI GCGC 1 cut(s) 510
Kzo9I GATC 6 cut(s) 336, 402, 918, 1159, 1226, 1357
LmnI GCTCC 1 cut(s) 953
Lsp1109I GCAGC 3 cut(s) 267, 974, 1207
LweI GCATC 8 cut(s) 503, 522, 583, 785, 1012, 1179, 1316, 1341
MaeI CTAG 2 cut(s) 104, 755
MaeII ACGT 3 cut(s) 425, 481, 1204
MaeIII GTNAC 3 cut(s) 43, 217, 462
MalI GATC 6 cut(s) 338, 404, 920, 1161, 1228, 1359
MboI GATC 6 cut(s) 336, 402, 918, 1159, 1226, 1357
MboII GAAGA 6 cut(s) 295, 775, 925, 928, 1081, 1384
MfeI CAATTG 1 cut(s) 181
MflI RGATCY 3 cut(s) 336, 402, 1357
MhlI GDGCHC 1 cut(s) 92
MluCI AATT 7 cut(s) 181, 313, 883, 1072, 1089, 1274, 1312
MlyI GAGTC 3 cut(s) 142, 360, 977
MmeI TCCRAC 2 cut(s) 62, 548
Mph1103I ATGCAT 2 cut(s) 537, 851
MroXI GAANNNNTTC 2 cut(s) 419, 1073
MseI TTAA 4 cut(s) 975, 1017, 1122, 1250
MslI CAYNNNNRTG 1 cut(s) 1155
MspA1I CMGCKG 2 cut(s) 965, 1155
MspI CCGG 4 cut(s) 5, 376, 521, 547
MspR9I CCNGG 4 cut(s) 327, 377, 399, 552
MunI CAATTG 1 cut(s) 181
MvaI CCWGG 3 cut(s) 327, 399, 552
MvnI CGCG 3 cut(s) 14, 117, 146
MwoI GCNNNNNNNGC 9 cut(s) 167, 306, 450, 614, 739, 804, 962, 1329, 1403
NciI CCSGG 1 cut(s) 377
NcoI CCATGG 1 cut(s) 515
NdeI CATATG 1 cut(s) 1255
NdeII GATC 6 cut(s) 336, 402, 918, 1159, 1226, 1357
NlaIII CATG 6 cut(s) 206, 440, 503, 519, 608, 1054
NmeAIII GCCGAG 2 cut(s) 53, 319
NmuCI GTSAC 2 cut(s) 43, 217
NruI TCGCGA 2 cut(s) 14, 146
NsbI TGCGCA 1 cut(s) 511
NsiI ATGCAT 2 cut(s) 537, 851
NspI RCATGY 2 cut(s) 440, 608
NspV TTCGAA 1 cut(s) 1093
OliI CACNNNNGTG 1 cut(s) 1155
PaeI GCATGC 1 cut(s) 608
PasI CCCWGGG 1 cut(s) 326
PceI AGGCCT 1 cut(s) 397
PciI ACATGT 1 cut(s) 436
PcsI WCGNNNNNNNCGW 1 cut(s) 35
PdmI GAANNNNTTC 2 cut(s) 419, 1073
PfeI GAWTC 5 cut(s) 16, 32, 233, 241, 924
PflFI GACNNNGTC 1 cut(s) 203
PflMI CCANNNNNTGG 1 cut(s) 229
PkrI GCNGC 3 cut(s) 257, 964, 1222
PleI GAGTC 3 cut(s) 142, 360, 976
PmaCI CACGTG 2 cut(s) 426, 1205
PmlI CACGTG 2 cut(s) 426, 1205
PpsI GAGTC 3 cut(s) 142, 360, 976
Ppu21I YACGTR 2 cut(s) 426, 1205
PscI ACATGT 1 cut(s) 436
PshBI ATTAAT 1 cut(s) 1017
Psp124BI GAGCTC 1 cut(s) 92
Psp6I CCWGG 3 cut(s) 325, 397, 550
PspCI CACGTG 2 cut(s) 426, 1205
PspEI GGTNACC 1 cut(s) 217
PspGI CCWGG 3 cut(s) 325, 397, 550
PspPI GGNCC 3 cut(s) 7, 199, 1280
PsuI RGATCY 3 cut(s) 336, 402, 1357
PsyI GACNNNGTC 1 cut(s) 203
PvuII CAGCTG 2 cut(s) 965, 1155
RruI TCGCGA 2 cut(s) 14, 146
RsaI GTAC 2 cut(s) 480, 889
RsaNI GTAC 2 cut(s) 479, 888
RseI CAYNNNNRTG 1 cut(s) 1155
SacI GAGCTC 1 cut(s) 92
SaqAI TTAA 4 cut(s) 975, 1017, 1122, 1250
SatI GCNGC 3 cut(s) 256, 963, 1221
Sau3AI GATC 6 cut(s) 336, 402, 918, 1159, 1226, 1357
Sau96I GGNCC 3 cut(s) 7, 199, 1280
SchI GAGTC 3 cut(s) 142, 360, 977
ScrFI CCNGG 4 cut(s) 327, 377, 399, 552
SduI GDGCHC 1 cut(s) 92
SfaNI GCATC 8 cut(s) 503, 522, 583, 785, 1012, 1179, 1316, 1341
SfcI CTRYAG 1 cut(s) 489
SfuI TTCGAA 1 cut(s) 1093
SinI GGWCC 3 cut(s) 7, 199, 1280
SmiMI CAYNNNNRTG 1 cut(s) 1155
SphI GCATGC 1 cut(s) 608
Sse9I AATT 7 cut(s) 181, 313, 883, 1072, 1089, 1274, 1312
SseBI AGGCCT 1 cut(s) 397
SsiI CCGC 7 cut(s) 115, 253, 276, 431, 472, 936, 1302
SspI AATATT 1 cut(s) 748
SspMI CTAG 2 cut(s) 104, 755
SstI GAGCTC 1 cut(s) 92
StuI AGGCCT 1 cut(s) 397
StyD4I CCNGG 4 cut(s) 325, 375, 397, 550
StyI CCWWGG 1 cut(s) 515
TaaI ACNGT 4 cut(s) 43, 167, 896, 944
TaiI ACGT 3 cut(s) 428, 484, 1207
TaqI TCGA 3 cut(s) 996, 1093, 1110
TaqII GACCGA 1 cut(s) 82
TasI AATT 7 cut(s) 181, 313, 883, 1072, 1089, 1274, 1312
TatI WGTACW 1 cut(s) 887
TfiI GAWTC 5 cut(s) 16, 32, 233, 241, 924
Tru1I TTAA 4 cut(s) 975, 1017, 1122, 1250
Tru9I TTAA 4 cut(s) 975, 1017, 1122, 1250
TscAI CASTG 2 cut(s) 56, 947
TseFI GTSAC 2 cut(s) 43, 217
TseI GCWGC 3 cut(s) 255, 962, 1220
Tsp45I GTSAC 2 cut(s) 43, 217
TspDTI ATGAA 3 cut(s) 436, 979, 1067
TspGWI ACGGA 1 cut(s) 716
TspRI CASTG 2 cut(s) 56, 947
Tth111I GACNNNGTC 1 cut(s) 203
Van91I CCANNNNNTGG 1 cut(s) 229
VpaK11BI GGWCC 3 cut(s) 7, 199, 1280
VspI ATTAAT 1 cut(s) 1017
XapI RAATTY 2 cut(s) 1072, 1089
XceI RCATGY 2 cut(s) 440, 608
XcmI CCANNNNNNNNNTGG 1 cut(s) 585
XmnI GAANNNNTTC 2 cut(s) 419, 1073
XspI CTAG 2 cut(s) 104, 755
Zsp2I ATGCAT 2 cut(s) 537, 851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.