IQ-DOMAIN 14-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G59690 AT3G59690 |
| fragaria_vesca | FvH4_4g10360 FvH4_4g10360 FvH4_4g10360 FvH4_4g10360 FvH4_4g10360 FvH4_4g10360 |
| malus_domestica | MD04G1049400.v1.1 MD13G1257200.v1.1 |
| prunus_persica | Prupe.1G207600_v2.0.a1 Prupe.1G207600_v2.0.a1 |
| pyrus_communis | pycom04g04360 pycom13g26240 |
| rosa_chinensis | RchiOBHm_Chr4g0405911 |
| rosa_laevigata | RLG00000008817 |
| rosa_multiflora | Rmu_sc0001200.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00350570 |
| rosa_rugosa | Rorug04G0063300 Rorug04G0063400.1 Rorug04G0063500 Rorug04G0063600 |
| rosa_samantha | Rh4AG134200 Rh4BG129500 Rh4CG142100 Rh4DG128700 |
| rosa_wichuraiana | Rw4G010940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1193 |
| AatII | GACGTC | 1 cut(s) | 643 |
| Acc36I | ACCTGC | 1 cut(s) | 1193 |
| AccB1I | GGYRCC | 1 cut(s) | 337 |
| AciI | CCGC | 5 cut(s) | 50, 257, 583, 938, 1133 |
| AclWI | GGATC | 4 cut(s) | 374, 607, 620, 1216 |
| AcsI | RAATTY | 1 cut(s) | 180 |
| AcuI | CTGAAG | 2 cut(s) | 246, 1287 |
| AcyI | GRCGYC | 2 cut(s) | 338, 640 |
| AfaI | GTAC | 2 cut(s) | 1153, 1187 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 895, 1202, 1224 |
| AflIII | ACRYGT | 1 cut(s) | 208 |
| AgsI | TTSAA | 8 cut(s) | 197, 512, 590, 650, 674, 959, 996, 1420 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 533 |
| AjiI | CACGTC | 1 cut(s) | 1004 |
| AjnI | CCWGG | 1 cut(s) | 702 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 918, 950 |
| Alw21I | GWGCWC | 3 cut(s) | 325, 355, 490 |
| Alw26I | GTCTC | 2 cut(s) | 123, 1497 |
| AlwI | GGATC | 4 cut(s) | 374, 607, 620, 1216 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1495 |
| AoxI | GGCC | 1 cut(s) | 1559 |
| ApeKI | GCWGC | 3 cut(s) | 68, 449, 1260 |
| ApoI | RAATTY | 1 cut(s) | 180 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1205, 1237 |
| AspA2I | CCTAGG | 1 cut(s) | 362 |
| AspLEI | GCGC | 1 cut(s) | 340 |
| AspS9I | GGNCC | 2 cut(s) | 693, 1433 |
| AsuHPI | GGTGA | 4 cut(s) | 39, 246, 368, 827 |
| AvaII | GGWCC | 2 cut(s) | 693, 1433 |
| AvrII | CCTAGG | 1 cut(s) | 362 |
| BamHI | GGATCC | 1 cut(s) | 612 |
| BanI | GGYRCC | 1 cut(s) | 337 |
| BanII | GRGCYC | 6 cut(s) | 295, 310, 325, 355, 490, 1025 |
| Bbv12I | GWGCWC | 3 cut(s) | 325, 355, 490 |
| BbvI | GCAGC | 3 cut(s) | 80, 461, 1247 |
| BccI | CCATC | 2 cut(s) | 364, 709 |
| BceAI | ACGGC | 2 cut(s) | 1314, 1546 |
| BciT130I | CCWGG | 1 cut(s) | 704 |
| BcoDI | GTCTC | 2 cut(s) | 123, 1497 |
| BfaI | CTAG | 5 cut(s) | 363, 500, 878, 1320, 1326 |
| BfmI | CTRYAG | 4 cut(s) | 394, 454, 1503, 1542 |
| BfoI | RGCGCY | 1 cut(s) | 341 |
| BfuAI | ACCTGC | 1 cut(s) | 1193 |
| BisI | GCNGC | 3 cut(s) | 69, 450, 1261 |
| BlnI | CCTAGG | 1 cut(s) | 362 |
| BlsI | GCNGC | 3 cut(s) | 70, 451, 1262 |
| BmcAI | AGTACT | 1 cut(s) | 1153 |
| Bme1390I | CCNGG | 1 cut(s) | 704 |
| Bme18I | GGWCC | 2 cut(s) | 693, 1433 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 533 |
| BmgBI | CACGTC | 1 cut(s) | 1004 |
| BmgT120I | GGNCC | 2 cut(s) | 693, 1433 |
| BmiI | GGNNCC | 8 cut(s) | 294, 309, 339, 405, 419, 614, 1278, 1293 |
| BmrFI | CCNGG | 1 cut(s) | 704 |
| BmrI | ACTGGG | 1 cut(s) | 742 |
| BmsI | GCATC | 2 cut(s) | 716, 765 |
| BmuI | ACTGGG | 1 cut(s) | 742 |
| BpuEI | CTTGAG | 2 cut(s) | 718, 1386 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1065 |
| BsaHI | GRCGYC | 2 cut(s) | 338, 640 |
| BsaJI | CCNNGG | 8 cut(s) | 57, 287, 302, 332, 362, 905, 1337, 1527 |
| BsaWI | WCCGGW | 1 cut(s) | 400 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 918, 948 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 895, 1202, 1224 |
| Bse1I | ACTGG | 3 cut(s) | 737, 923, 1489 |
| Bse3DI | GCAATG | 2 cut(s) | 822, 975 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1065 |
| BseBI | CCWGG | 1 cut(s) | 704 |
| BseDI | CCNNGG | 8 cut(s) | 57, 287, 302, 332, 362, 905, 1337, 1527 |
| BseGI | GGATG | 4 cut(s) | 742, 780, 1045, 1246 |
| BseJI | GATNNNNATC | 1 cut(s) | 1065 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 895, 1202, 1224 |
| BseMI | GCAATG | 2 cut(s) | 822, 975 |
| BseMII | CTCAG | 2 cut(s) | 608, 702 |
| BseNI | ACTGG | 3 cut(s) | 737, 923, 1489 |
| BseXI | GCAGC | 3 cut(s) | 80, 461, 1247 |
| BshFI | GGCC | 1 cut(s) | 1561 |
| BshNI | GGYRCC | 1 cut(s) | 337 |
| BsiHKAI | GWGCWC | 3 cut(s) | 325, 355, 490 |
| BsiSI | CCGG | 1 cut(s) | 401 |
| BslFI | GGGAC | 2 cut(s) | 540, 1369 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 895, 1202, 1224 |
| BsmAI | GTCTC | 2 cut(s) | 123, 1497 |
| BsmFI | GGGAC | 2 cut(s) | 540, 1369 |
| BsmI | GAATGC | 1 cut(s) | 559 |
| BsnI | GGCC | 1 cut(s) | 1561 |
| Bsp1286I | GDGCHC | 6 cut(s) | 295, 310, 325, 355, 490, 1025 |
| Bsp143I | GATC | 5 cut(s) | 366, 387, 612, 890, 1208 |
| Bsp19I | CCATGG | 1 cut(s) | 905 |
| BspACI | CCGC | 5 cut(s) | 50, 257, 583, 938, 1133 |
| BspANI | GGCC | 1 cut(s) | 1561 |
| BspCNI | CTCAG | 2 cut(s) | 607, 703 |
| BspLI | GGNNCC | 8 cut(s) | 294, 309, 339, 405, 419, 614, 1278, 1293 |
| BspMAI | CTGCAG | 1 cut(s) | 1546 |
| BspMI | ACCTGC | 1 cut(s) | 1193 |
| BspPI | GGATC | 4 cut(s) | 374, 607, 620, 1216 |
| BspT107I | GGYRCC | 1 cut(s) | 337 |
| BsrDI | GCAATG | 2 cut(s) | 822, 975 |
| BsrI | ACTGG | 3 cut(s) | 737, 923, 1489 |
| BssECI | CCNNGG | 8 cut(s) | 57, 287, 302, 332, 362, 905, 1337, 1527 |
| BssMI | GATC | 5 cut(s) | 366, 387, 612, 890, 1208 |
| BssNI | GRCGYC | 2 cut(s) | 338, 640 |
| BssT1I | CCWWGG | 7 cut(s) | 57, 287, 302, 332, 362, 905, 1337 |
| Bst2UI | CCWGG | 1 cut(s) | 704 |
| Bst4CI | ACNGT | 1 cut(s) | 1531 |
| BstACI | GRCGYC | 2 cut(s) | 338, 640 |
| BstC8I | GCNNGC | 2 cut(s) | 746, 1542 |
| BstDEI | CTNAG | 4 cut(s) | 413, 577, 594, 711 |
| BstDSI | CCRYGG | 2 cut(s) | 905, 1527 |
| BstF5I | GGATG | 4 cut(s) | 742, 780, 1045, 1246 |
| BstH2I | RGCGCY | 1 cut(s) | 341 |
| BstHHI | GCGC | 1 cut(s) | 340 |
| BstKTI | GATC | 5 cut(s) | 369, 390, 615, 893, 1211 |
| BstMAI | GTCTC | 2 cut(s) | 123, 1497 |
| BstMBI | GATC | 5 cut(s) | 366, 387, 612, 890, 1208 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 265, 1257, 1298 |
| BstNI | CCWGG | 1 cut(s) | 704 |
| BstNSI | RCATGY | 2 cut(s) | 212, 571 |
| BstSCI | CCNGG | 1 cut(s) | 702 |
| BstSFI | CTRYAG | 4 cut(s) | 394, 454, 1503, 1542 |
| BstV1I | GCAGC | 3 cut(s) | 80, 461, 1247 |
| BstX2I | RGATCY | 2 cut(s) | 612, 1208 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 79, 912 |
| BstYI | RGATCY | 2 cut(s) | 612, 1208 |
| BsuRI | GGCC | 1 cut(s) | 1561 |
| BtgI | CCRYGG | 2 cut(s) | 905, 1527 |
| BtrI | CACGTC | 1 cut(s) | 1004 |
| BtsCI | GGATG | 4 cut(s) | 742, 780, 1045, 1246 |
| BtsIMutI | CAGTG | 1 cut(s) | 270 |
| BveI | ACCTGC | 1 cut(s) | 1193 |
| Cac8I | GCNNGC | 2 cut(s) | 746, 1542 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1495 |
| CfoI | GCGC | 1 cut(s) | 340 |
| Cfr13I | GGNCC | 2 cut(s) | 693, 1433 |
| CseI | GACGC | 1 cut(s) | 530 |
| Csp6I | GTAC | 2 cut(s) | 1152, 1186 |
| CviAII | CATG | 7 cut(s) | 209, 425, 559, 568, 906, 1099, 1288 |
| CviQI | GTAC | 2 cut(s) | 1152, 1186 |
| DdeI | CTNAG | 4 cut(s) | 413, 577, 594, 711 |
| DinI | GGCGCC | 1 cut(s) | 339 |
| DpnI | GATC | 5 cut(s) | 368, 389, 614, 892, 1210 |
| DpnII | GATC | 5 cut(s) | 366, 387, 612, 890, 1208 |
| DriI | GACNNNNNGTC | 1 cut(s) | 533 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 533 |
| Ecl136II | GAGCTC | 3 cut(s) | 323, 353, 488 |
| Eco130I | CCWWGG | 7 cut(s) | 57, 287, 302, 332, 362, 905, 1337 |
| Eco24I | GRGCYC | 6 cut(s) | 295, 310, 325, 355, 490, 1025 |
| Eco32I | GATATC | 1 cut(s) | 886 |
| Eco47I | GGWCC | 2 cut(s) | 693, 1433 |
| Eco53kI | GAGCTC | 3 cut(s) | 323, 353, 488 |
| Eco57I | CTGAAG | 2 cut(s) | 246, 1287 |
| EcoICRI | GAGCTC | 3 cut(s) | 323, 353, 488 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1433 |
| EcoRII | CCWGG | 1 cut(s) | 702 |
| EcoRV | GATATC | 1 cut(s) | 886 |
| EcoT14I | CCWWGG | 7 cut(s) | 57, 287, 302, 332, 362, 905, 1337 |
| EcoT22I | ATGCAT | 1 cut(s) | 829 |
| EcoT38I | GRGCYC | 6 cut(s) | 295, 310, 325, 355, 490, 1025 |
| EgeI | GGCGCC | 1 cut(s) | 339 |
| EheI | GGCGCC | 1 cut(s) | 339 |
| ErhI | CCWWGG | 7 cut(s) | 57, 287, 302, 332, 362, 905, 1337 |
| FaeI | CATG | 7 cut(s) | 212, 428, 562, 571, 909, 1102, 1291 |
| FaqI | GGGAC | 2 cut(s) | 540, 1369 |
| FatI | CATG | 7 cut(s) | 208, 424, 558, 567, 905, 1098, 1287 |
| FauI | CCCGC | 3 cut(s) | 576, 945, 1140 |
| FauNDI | CATATG | 1 cut(s) | 1057 |
| Fnu4HI | GCNGC | 3 cut(s) | 69, 450, 1261 |
| FokI | GGATG | 4 cut(s) | 749, 787, 1032, 1253 |
| FriOI | GRGCYC | 6 cut(s) | 295, 310, 325, 355, 490, 1025 |
| Fsp4HI | GCNGC | 3 cut(s) | 69, 450, 1261 |
| FspBI | CTAG | 5 cut(s) | 363, 500, 878, 1320, 1326 |
| GlaI | GCGC | 1 cut(s) | 339 |
| GluI | GCNGC | 3 cut(s) | 69, 450, 1261 |
| HaeII | RGCGCY | 1 cut(s) | 341 |
| HaeIII | GGCC | 1 cut(s) | 1561 |
| HapII | CCGG | 1 cut(s) | 401 |
| HgaI | GACGC | 1 cut(s) | 530 |
| HhaI | GCGC | 1 cut(s) | 340 |
| Hin1I | GRCGYC | 2 cut(s) | 338, 640 |
| Hin1II | CATG | 7 cut(s) | 212, 428, 562, 571, 909, 1102, 1291 |
| Hin6I | GCGC | 1 cut(s) | 338 |
| HinP1I | GCGC | 1 cut(s) | 338 |
| HincII | GTYRAC | 1 cut(s) | 932 |
| HindII | GTYRAC | 1 cut(s) | 932 |
| HindIII | AAGCTT | 1 cut(s) | 478 |
| HinfI | GANTC | 7 cut(s) | 598, 1214, 1357, 1370, 1399, 1457, 1523 |
| HpaII | CCGG | 1 cut(s) | 401 |
| HphI | GGTGA | 4 cut(s) | 39, 246, 368, 827 |
| Hpy166II | GTNNAC | 2 cut(s) | 932, 1188 |
| Hpy188I | TCNGA | 6 cut(s) | 158, 597, 712, 890, 1213, 1296 |
| Hpy188III | TCNNGA | 4 cut(s) | 616, 996, 1007, 1070 |
| Hpy8I | GTNNAC | 2 cut(s) | 932, 1188 |
| Hpy99I | CGWCG | 1 cut(s) | 1300 |
| HpyCH4III | ACNGT | 1 cut(s) | 1531 |
| HpyCH4IV | ACGT | 3 cut(s) | 640, 928, 1003 |
| HpyCH4V | TGCA | 8 cut(s) | 95, 571, 778, 827, 968, 1055, 1498, 1544 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 265, 1257, 1298 |
| HpyF3I | CTNAG | 4 cut(s) | 413, 577, 594, 711 |
| HpySE526I | ACGT | 3 cut(s) | 640, 928, 1003 |
| Hsp92I | GRCGYC | 2 cut(s) | 338, 640 |
| Hsp92II | CATG | 7 cut(s) | 212, 428, 562, 571, 909, 1102, 1291 |
| HspAI | GCGC | 1 cut(s) | 338 |
| KasI | GGCGCC | 1 cut(s) | 337 |
| Kzo9I | GATC | 5 cut(s) | 366, 387, 612, 890, 1208 |
| LmnI | GCTCC | 6 cut(s) | 202, 298, 313, 328, 358, 1297 |
| Lsp1109I | GCAGC | 3 cut(s) | 80, 461, 1247 |
| LweI | GCATC | 2 cut(s) | 716, 765 |
| MaeI | CTAG | 5 cut(s) | 363, 500, 878, 1320, 1326 |
| MaeII | ACGT | 3 cut(s) | 640, 928, 1003 |
| MaeIII | GTNAC | 1 cut(s) | 603 |
| MalI | GATC | 5 cut(s) | 368, 389, 614, 892, 1210 |
| MboI | GATC | 5 cut(s) | 366, 387, 612, 890, 1208 |
| MboII | GAAGA | 3 cut(s) | 97, 118, 1438 |
| MflI | RGATCY | 2 cut(s) | 612, 1208 |
| MhlI | GDGCHC | 6 cut(s) | 295, 310, 325, 355, 490, 1025 |
| MluCI | AATT | 2 cut(s) | 136, 180 |
| Mly113I | GGCGCC | 1 cut(s) | 338 |
| MlyI | GAGTC | 3 cut(s) | 1208, 1351, 1393 |
| MmeI | TCCRAC | 2 cut(s) | 1319, 1531 |
| Mph1103I | ATGCAT | 1 cut(s) | 829 |
| MseI | TTAA | 2 cut(s) | 1143, 1566 |
| MslI | CAYNNNNRTG | 1 cut(s) | 910 |
| MspA1I | CMGCKG | 1 cut(s) | 841 |
| MspI | CCGG | 1 cut(s) | 401 |
| MspR9I | CCNGG | 1 cut(s) | 704 |
| Mva1269I | GAATGC | 1 cut(s) | 559 |
| MvaI | CCWGG | 1 cut(s) | 704 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 265, 1257, 1298 |
| NarI | GGCGCC | 1 cut(s) | 338 |
| NcoI | CCATGG | 1 cut(s) | 905 |
| NdeI | CATATG | 1 cut(s) | 1057 |
| NdeII | GATC | 5 cut(s) | 366, 387, 612, 890, 1208 |
| NlaIII | CATG | 7 cut(s) | 212, 428, 562, 571, 909, 1102, 1291 |
| NlaIV | GGNNCC | 8 cut(s) | 294, 309, 339, 405, 419, 614, 1278, 1293 |
| NmuCI | GTSAC | 1 cut(s) | 603 |
| NsiI | ATGCAT | 1 cut(s) | 829 |
| NspI | RCATGY | 2 cut(s) | 212, 571 |
| PaqCI | CACCTGC | 1 cut(s) | 1193 |
| PciI | ACATGT | 1 cut(s) | 208 |
| PctI | GAATGC | 1 cut(s) | 559 |
| PfeI | GAWTC | 4 cut(s) | 598, 1370, 1457, 1523 |
| PflFI | GACNNNGTC | 1 cut(s) | 1002 |
| PkrI | GCNGC | 3 cut(s) | 70, 451, 1262 |
| PleI | GAGTC | 3 cut(s) | 1208, 1351, 1393 |
| PluTI | GGCGCC | 1 cut(s) | 341 |
| PpsI | GAGTC | 3 cut(s) | 1208, 1351, 1393 |
| PpuMI | RGGWCCY | 1 cut(s) | 1433 |
| PscI | ACATGT | 1 cut(s) | 208 |
| Psp124BI | GAGCTC | 3 cut(s) | 325, 355, 490 |
| Psp5II | RGGWCCY | 1 cut(s) | 1433 |
| Psp6I | CCWGG | 1 cut(s) | 702 |
| PspGI | CCWGG | 1 cut(s) | 702 |
| PspN4I | GGNNCC | 8 cut(s) | 294, 309, 339, 405, 419, 614, 1278, 1293 |
| PspPI | GGNCC | 2 cut(s) | 693, 1433 |
| PspPPI | RGGWCCY | 1 cut(s) | 1433 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1120, 1152 |
| PstI | CTGCAG | 1 cut(s) | 1546 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1495 |
| PsuI | RGATCY | 2 cut(s) | 612, 1208 |
| PsyI | GACNNNGTC | 1 cut(s) | 1002 |
| PvuII | CAGCTG | 1 cut(s) | 841 |
| RsaI | GTAC | 2 cut(s) | 1153, 1187 |
| RsaNI | GTAC | 2 cut(s) | 1152, 1186 |
| RseI | CAYNNNNRTG | 1 cut(s) | 910 |
| SacI | GAGCTC | 3 cut(s) | 325, 355, 490 |
| SaqAI | TTAA | 2 cut(s) | 1143, 1566 |
| SatI | GCNGC | 3 cut(s) | 69, 450, 1261 |
| Sau3AI | GATC | 5 cut(s) | 366, 387, 612, 890, 1208 |
| Sau96I | GGNCC | 2 cut(s) | 693, 1433 |
| SbfI | CCTGCAGG | 1 cut(s) | 1546 |
| ScaI | AGTACT | 1 cut(s) | 1153 |
| SchI | GAGTC | 3 cut(s) | 1208, 1351, 1393 |
| ScrFI | CCNGG | 1 cut(s) | 704 |
| SdaI | CCTGCAGG | 1 cut(s) | 1546 |
| SduI | GDGCHC | 6 cut(s) | 295, 310, 325, 355, 490, 1025 |
| SfaNI | GCATC | 2 cut(s) | 716, 765 |
| SfcI | CTRYAG | 4 cut(s) | 394, 454, 1503, 1542 |
| SfoI | GGCGCC | 1 cut(s) | 339 |
| SinI | GGWCC | 2 cut(s) | 693, 1433 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 910 |
| SmlI | CTYRAG | 2 cut(s) | 697, 1401 |
| SmoI | CTYRAG | 2 cut(s) | 697, 1401 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1546 |
| Sse9I | AATT | 2 cut(s) | 136, 180 |
| SsiI | CCGC | 5 cut(s) | 50, 257, 583, 938, 1133 |
| SspDI | GGCGCC | 1 cut(s) | 337 |
| SspMI | CTAG | 5 cut(s) | 363, 500, 878, 1320, 1326 |
| SstI | GAGCTC | 3 cut(s) | 325, 355, 490 |
| StyD4I | CCNGG | 1 cut(s) | 702 |
| StyI | CCWWGG | 7 cut(s) | 57, 287, 302, 332, 362, 905, 1337 |
| TaaI | ACNGT | 1 cut(s) | 1531 |
| TaiI | ACGT | 3 cut(s) | 643, 931, 1006 |
| TasI | AATT | 2 cut(s) | 136, 180 |
| TatI | WGTACW | 2 cut(s) | 1151, 1185 |
| TfiI | GAWTC | 4 cut(s) | 598, 1370, 1457, 1523 |
| Tru1I | TTAA | 2 cut(s) | 1143, 1566 |
| Tru9I | TTAA | 2 cut(s) | 1143, 1566 |
| TscAI | CASTG | 1 cut(s) | 270 |
| TseFI | GTSAC | 1 cut(s) | 603 |
| TseI | GCWGC | 3 cut(s) | 68, 449, 1260 |
| Tsp45I | GTSAC | 1 cut(s) | 603 |
| TspDTI | ATGAA | 6 cut(s) | 129, 133, 362, 575, 986, 1115 |
| TspGWI | ACGGA | 2 cut(s) | 622, 1257 |
| TspRI | CASTG | 1 cut(s) | 270 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1002 |
| VpaK11BI | GGWCC | 2 cut(s) | 693, 1433 |
| XapI | RAATTY | 1 cut(s) | 180 |
| XceI | RCATGY | 2 cut(s) | 212, 571 |
| XmaJI | CCTAGG | 1 cut(s) | 362 |
| XspI | CTAG | 5 cut(s) | 363, 500, 878, 1320, 1326 |
| ZraI | GACGTC | 1 cut(s) | 641 |
| ZrmI | AGTACT | 1 cut(s) | 1153 |
| Zsp2I | ATGCAT | 1 cut(s) | 829 |