Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0019309

Physical Location & Seq

Genomic Coordinates Reverse (-)

15262568 .. 15274492

Gene Structure 11925 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG088500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGAGTCATTCAACGGGCTCGCCGAACCACATAAACTATGATGTGGAAGCCGGAAGCAACCGTTCCGGCGACGACGAGCAGTCGTCGAATGTTTTTGATATTACCAGAACTAAGCATGCTTCCGTCGAGCGTCTCCGCCGTTGGAGGCAAGCGGCACTTGTGCTAAATGCTTCTCGTCGATTCCGGTATACCTTAGACTTGAAAAAGGAGGAAGAAAAAAAGCAGACGTTAAGGAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATTTCTTTTCAAGGAATCCGTAACACAGGAAAATGGAATTGTGCCACCAAAACCAAGTTCTGCTGGTGAATTTGCAATTGGACAAGAAGAACTAGCTTCAATTTCAAGGGATCATAATTTTACTACTCTGCAGCAATATGGGGGGGTCAAAGGCCTCGGAGAATTATTGAAAACAAGTTTAGAAAAGGGAATTCCTGGAAGTGATGATGATTTACTAAAACGAAAAACTGCATATGGATCCAACACATATCCCCGGAAAAAACCAAGGAGTTTCTGGAGATTTCTCTGGGAAGCTTGCCGAGATCTTACTCTTATCATTTTGATGGTAGCTGCTGTGGCTTCTTTAGCGCTGGGTATAAAAACAGAGGGTATAAAGGAGGGATGGTATGATGGGGGCAGCATTGCTTTTGCAGTTCTCCTGGTCATTGTCGTGACAGCCATTAGTGACTACAAACAATCTCTGCAGTTCCAGAATCTAAATGAGGAAAAGAGAAATATACAAATTGAGGTTATCAGAGGTGGTAGACGTGTTGAGGTTTCAATTTATGATCTTGTTGTAGGTGATGTTATACCCCTTAACATTGGTGATCAGGTTCCTGCTGATGGGGTTTTAATCATTGGTCATTCACTTTCAATTGATGAGTCTAGCATGACTGGCGAGTCCAAGATTGTTCGCAAGGACTTCAAAGAACCATTTCTAATGTCCGGCTGCAAAGTAGCAGATGGAAATGGTATAATGCTGGTGCGCTTGAATGGGGTTGCTACCTTCATTGGTGTTGTGGGACTCACAGTAGCTCTCCTCGTCTTATGTGTCCTTTTGGTCAGATACTTTACTGGCCATACAACAAATGCAGATGGAACTCCTCAGTTTGTTGCCGGAAAGACAAAATTTGGGAAAGCCATAGATGGAGCCATCAAAATTGTCACTATTGCAGTCACCATTGTAGTGGTTGCTGTTCCTGAAGGCCTCCCCTTAGCTGTTACCTTAACACTTGCGTACTCAATGAGAAAAATGATGGCAGATAAGGCCTTGATGACTGTGGTCAAGTCATGTGCATGTTTGAAGAAAGTCAATGACTCTGATGGCAAGCCAGACTTGTCGCCAAAGATATCTTCTTTGATTATTGAAGGCGTAGCTCAGAATACAACTGGCAATGTTTATGTGCCTGAGACTGGTGGTGATGTAGAGGTTACTGGATCACCAACGGAGAAGGCAATTCTGCAGTGGGCACTCAAGCTTGGGATGATTTTTGAAGCCACCAGGTCTCAATCTACAATTCTTCATGTGTTCCCATTCAACTCCGAGAAAAAACGAGGCGGTGTAGCAGTTAAATTGCCAAACAATGAAGTTCATATACACTGGAAAGGGGCTGCTGAAATAATCTTGGCCTCATGCACAAGATACATTGACGACAATGATCAGGTGGCAGCAATGGACGACGACAAGCTTATGTTTTTCAGGAAATCTATTGAGGATATGGCTGTTGGTAGTTTGCGTTGTGTTGCTATAGCATATTTACCATATGAATTGGAAAATGTTCCAACTGGTGAACAACAATTAGCTGATTGGGCCATGCCTGCAGATGACCTTGTTTTACTTGCTATTGTTGGTATAAAGGATCCTTGTCGACCAGGAGTCGGAGATGCAGTGAGACTATGCCAAAAGGCTGGTGTTAAGGTACGCATGGTTACTGGGGACAATGTTCAGACTGCAAAGGCAATAGCATTGGAATGTGGCATACTGCGTTCTGATTCAGATCTTAGTGAGCCAACTCTAATTGAAGGGAAAGTCTTCCGTGAGCTTTCTGATAGGCAGAGAGAAGAGGTTGCTGAGAAAATCTCGCTTCTGTGGGTGAATCTTATAATGGATACTCTTGGAGCACTAGCATTGGCTACTGAGCCTCCTACGAATCATCTGATGGACAGACCCCCTGTTGGTCGAAGGGAACCGCTGATAACTAATATAATGTGGAGGAACTTATTGATTCAGGCTATCTACCAAATTACTGTCCTTCTTATCCTTAATTTCCGAGGGAAAAGTATTCTCAATCTGGAACATGATTCTACTGACCATGCAGACAAAGTGAAGAATACACTGATATTCAATACATTTGTCCTTTGTCAAATTCTCATTGTCGAGTTTCTGGGGAAGTTTACTACAACAGTCCGGCTTAACTGGAAGCATTGGTTGATTTCTGTTGTCATCGCTTTTATCAGTTGGCCTCTTGCTGTTGTTGGGAAGTTTATTCCGGTACCCGAAACTCCTTTCCACAGATATTTCACTAGGAGTCCTCTCTTTAAGTTTATAAAACGAATATTCTGTCGGCGAAGAGAGAGAACAGAGGTCAGTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

874

Amino Acids

96.76

Weight (kDa)

8.81

Isoelectric Point (pI)

39.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CaATP_NAI	PF12515	30 - 72	1.8e-17	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	136 - 204	3.7e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	258 - 350	1.4e-17	P-type ATPase actuator domain
Cation_ATPase	PF13246	464 - 634	1.9e-29	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	703 - 801	2.8e-23	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0019309)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G072200_v2.0.a1
rosa_samantha	Rh4AG085600 Rh4AG090800 Rh4BG088000 Rh4BG088500 Rh4DG083100 Rh4DG083700 Rh5AG265200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2132, 2576
AasI	GACNNNNNNGTC	1 cut(s)	928
Acc65I	GGTACC	1 cut(s)	2521
AccB1I	GGYRCC	1 cut(s)	2521
AccI	GTMKAC	3 cut(s)	188, 793, 1897
AciI	CCGC	4 cut(s)	136, 152, 1587, 2219
AclWI	GGATC	6 cut(s)	387, 501, 514, 1474, 1883, 1896
AcoI	YGGCCR	1 cut(s)	1105
AcsI	RAATTY	4 cut(s)	338, 459, 1157, 2394
AcuI	CTGAAG	1 cut(s)	1251
AfaI	GTAC	3 cut(s)	1268, 1950, 2523
AfeI	AGCGCT	1 cut(s)	618
AfiI	CCNNNNNNNGG	4 cut(s)	872, 1442, 1907, 2204
AflIII	ACRYGT	1 cut(s)	796
AhdI	GACNNNNNGTC	2 cut(s)	79, 1904
AjiI	CACGTC	1 cut(s)	797
AjnI	CCWGG	4 cut(s)	463, 687, 1529, 1900
AjuI	GAANNNNNNNTTGG	6 cut(s)	310, 330, 342, 362, 1366, 1398
Alw21I	GWGCWC	2 cut(s)	247, 2152
Alw26I	GTCTC	4 cut(s)	137, 1433, 1539, 1915
AlwI	GGATC	6 cut(s)	387, 501, 514, 1474, 1883, 1896
Aor51HI	AGCGCT	1 cut(s)	618
AoxI	GGCC	7 cut(s)	421, 1105, 1234, 1296, 1656, 1839, 2489
ApeKI	GCWGC	7 cut(s)	266, 400, 599, 666, 978, 1640, 1697
ApoI	RAATTY	4 cut(s)	338, 459, 1157, 2394
ArsI	GACNNNNNNTTYG	2 cut(s)	2575, 2607
Asp700I	GAANNNNTTC	3 cut(s)	963, 1806, 2060
Asp718I	GGTACC	1 cut(s)	2521
AspLEI	GCGC	2 cut(s)	619, 1017
AspS9I	GGNCC	1 cut(s)	1839
AsuC2I	CCSGG	1 cut(s)	523
AsuHPI	GGTGA	8 cut(s)	347, 842, 866, 1198, 1460, 1461, 1829, 2134
BaeGI	GKGCMC	1 cut(s)	1501
BalI	TGGCCA	1 cut(s)	1107
BamHI	GGATCC	2 cut(s)	506, 1888
BanI	GGYRCC	1 cut(s)	2521
BanII	GRGCYC	1 cut(s)	20
BarI	GAAGNNNNNNTAC	2 cut(s)	1608, 1640
BbsI	GAAGAC	1 cut(s)	2053
Bbv12I	GWGCWC	2 cut(s)	247, 2152
BbvI	GCAGC	7 cut(s)	253, 412, 586, 678, 965, 1627, 1709
BceAI	ACGGC	1 cut(s)	123
BciT130I	CCWGG	4 cut(s)	465, 689, 1531, 1902
BciVI	GTATCC	1 cut(s)	2131
BclI	TGATCA	2 cut(s)	856, 1687
BcnI	CCSGG	1 cut(s)	523
BcoDI	GTCTC	4 cut(s)	137, 1433, 1539, 1915
BfaI	CTAG	4 cut(s)	362, 915, 2153, 2553
BfmI	CTRYAG	5 cut(s)	398, 731, 1490, 1776, 1848
BfoI	RGCGCY	1 cut(s)	620
BfuI	GTATCC	1 cut(s)	2131
BglII	AGATCT	2 cut(s)	571, 2026
BisI	GCNGC	8 cut(s)	153, 267, 401, 600, 667, 979, 1641, 1698
BlsI	GCNGC	8 cut(s)	154, 268, 402, 601, 668, 980, 1642, 1699
Bme1390I	CCNGG	5 cut(s)	465, 523, 689, 1531, 1902
BmeRI	GACNNNNNGTC	2 cut(s)	79, 1904
BmgBI	CACGTC	1 cut(s)	797
BmgT120I	GGNCC	1 cut(s)	1839
BmiI	GGNNCC	6 cut(s)	508, 864, 1180, 1890, 2217, 2523
BmrFI	CCNGG	5 cut(s)	465, 523, 689, 1531, 1902
BmrI	ACTGGG	1 cut(s)	1971
BmsI	GCATC	1 cut(s)	1903
BmuI	ACTGGG	1 cut(s)	1971
BoxI	GACNNNNGTC	1 cut(s)	1310
BpiI	GAAGAC	1 cut(s)	2053
BplI	GAGNNNNNCTC	2 cut(s)	2093, 2125
BpmI	CTGGAG	1 cut(s)	565
Bpu10I	CCTNAGC	1 cut(s)	1243
BpuEI	CTTGAG	1 cut(s)	1487
BpuMI	CCSGG	1 cut(s)	523
BsaBI	GATNNNNATC	1 cut(s)	2025
BsaI	GGTCTC	1 cut(s)	1539
BsaJI	CCNNGG	4 cut(s)	424, 521, 533, 2299
BsaWI	WCCGGW	2 cut(s)	183, 2518
BsaXI	ACNNNNNCTCC	6 cut(s)	638, 668, 1902, 1932, 2155, 2185
Bsc4I	CCNNNNNNNGG	4 cut(s)	872, 1442, 1907, 2204
Bse1I	ACTGG	9 cut(s)	928, 1108, 1423, 1447, 1468, 1634, 1819, 1966, 2450
Bse3DI	GCAATG	3 cut(s)	669, 1429, 1707
Bse8I	GATNNNNATC	1 cut(s)	2025
BseBI	CCWGG	4 cut(s)	465, 689, 1531, 1902
BseDI	CCNNGG	4 cut(s)	424, 521, 533, 2299
BseGI	GGATG	2 cut(s)	656, 1518
BseJI	GATNNNNATC	1 cut(s)	2025
BseLI	CCNNNNNNNGG	4 cut(s)	872, 1442, 1907, 2204
BseMI	GCAATG	3 cut(s)	669, 1429, 1707
BseMII	CTCAG	5 cut(s)	1148, 1421, 1428, 2091, 2157
BseNI	ACTGG	9 cut(s)	928, 1108, 1423, 1447, 1468, 1634, 1819, 1966, 2450
BseRI	GAGGAG	2 cut(s)	1058, 1122
BseSI	GKGCMC	1 cut(s)	1501
BseXI	GCAGC	7 cut(s)	253, 412, 586, 678, 965, 1627, 1709
BseYI	CCCAGC	1 cut(s)	619
BshFI	GGCC	7 cut(s)	423, 1107, 1236, 1298, 1658, 1841, 2491
BshNI	GGYRCC	1 cut(s)	2521
BsiHKAI	GWGCWC	2 cut(s)	247, 2152
BsiSI	CCGG	8 cut(s)	51, 66, 184, 523, 975, 1146, 2437, 2519
BslFI	GGGAC	2 cut(s)	1065, 1979
BslI	CCNNNNNNNGG	4 cut(s)	872, 1442, 1907, 2204
BsmAI	GTCTC	4 cut(s)	137, 1433, 1539, 1915
BsmBI	CGTCTC	1 cut(s)	137
BsmFI	GGGAC	2 cut(s)	1065, 1979
BsnI	GGCC	7 cut(s)	423, 1107, 1236, 1298, 1658, 1841, 2491
Bso31I	GGTCTC	1 cut(s)	1539
Bsp1286I	GDGCHC	4 cut(s)	20, 247, 1501, 2152
Bsp143I	GATC	9 cut(s)	379, 506, 571, 817, 856, 1466, 1687, 1888, 2026
BspACI	CCGC	4 cut(s)	136, 152, 1587, 2219
BspANI	GGCC	7 cut(s)	423, 1107, 1236, 1298, 1658, 1841, 2491
BspCNI	CTCAG	5 cut(s)	1147, 1420, 1429, 2092, 2158
BspLI	GGNNCC	6 cut(s)	508, 864, 1180, 1890, 2217, 2523
BspMAI	CTGCAG	4 cut(s)	402, 735, 1494, 1852
BspPI	GGATC	6 cut(s)	387, 501, 514, 1474, 1883, 1896
BspT107I	GGYRCC	1 cut(s)	2521
BspTNI	GGTCTC	1 cut(s)	1539
BsrDI	GCAATG	3 cut(s)	669, 1429, 1707
BsrI	ACTGG	9 cut(s)	928, 1108, 1423, 1447, 1468, 1634, 1819, 1966, 2450
BssECI	CCNNGG	4 cut(s)	424, 521, 533, 2299
BssMI	GATC	9 cut(s)	379, 506, 571, 817, 856, 1466, 1687, 1888, 2026
BssNAI	GTATAC	1 cut(s)	189
BssT1I	CCWWGG	1 cut(s)	533
Bst1107I	GTATAC	1 cut(s)	189
Bst2UI	CCWGG	4 cut(s)	465, 689, 1531, 1902
Bst4CI	ACNGT	5 cut(s)	62, 1060, 1309, 2278, 2434
Bst6I	CTCTTC	2 cut(s)	2085, 2593
BstC8I	GCNNGC	6 cut(s)	20, 117, 150, 565, 1358, 1848
BstDEI	CTNAG	9 cut(s)	111, 193, 1134, 1243, 1407, 1437, 2030, 2100, 2166
BstF5I	GGATG	2 cut(s)	656, 1518
BstH2I	RGCGCY	1 cut(s)	620
BstHHI	GCGC	2 cut(s)	619, 1017
BstKTI	GATC	9 cut(s)	382, 509, 574, 820, 859, 1469, 1690, 1891, 2029
BstMAI	GTCTC	4 cut(s)	137, 1433, 1539, 1915
BstMBI	GATC	9 cut(s)	379, 506, 571, 817, 856, 1466, 1687, 1888, 2026
BstMWI	GCNNNNNNNGC	7 cut(s)	263, 605, 614, 924, 1295, 1838, 1847
BstNI	CCWGG	4 cut(s)	465, 689, 1531, 1902
BstNSI	RCATGY	3 cut(s)	119, 251, 1329
BstPAI	GACNNNNGTC	1 cut(s)	1310
BstSCI	CCNGG	5 cut(s)	463, 521, 687, 1529, 1900
BstSFI	CTRYAG	5 cut(s)	398, 731, 1490, 1776, 1848
BstSLI	GKGCMC	1 cut(s)	1501
BstV1I	GCAGC	7 cut(s)	253, 412, 586, 678, 965, 1627, 1709
BstV2I	GAAGAC	1 cut(s)	2053
BstX2I	RGATCY	4 cut(s)	506, 571, 1888, 2026
BstXI	CCANNNNNNTGG	2 cut(s)	1216, 1937
BstYI	RGATCY	4 cut(s)	506, 571, 1888, 2026
BstZ17I	GTATAC	1 cut(s)	189
BsuI	GTATCC	1 cut(s)	2131
BsuRI	GGCC	7 cut(s)	423, 1107, 1236, 1298, 1658, 1841, 2491
BtgZI	GCGATG	1 cut(s)	2458
BtrI	CACGTC	1 cut(s)	797
BtsCI	GGATG	2 cut(s)	656, 1518
BtsI	GCAGTG	2 cut(s)	1499, 1923
BtsIMutI	CAGTG	4 cut(s)	1499, 1627, 1923, 2363
Cac8I	GCNNGC	6 cut(s)	20, 117, 150, 565, 1358, 1848
CfoI	GCGC	2 cut(s)	619, 1017
Cfr13I	GGNCC	1 cut(s)	1839
CseI	GACGC	1 cut(s)	119
CsiI	ACCWGGT	1 cut(s)	1529
Csp6I	GTAC	3 cut(s)	1267, 1949, 2522
CviQI	GTAC	3 cut(s)	1267, 1949, 2522
DdeI	CTNAG	9 cut(s)	111, 193, 1134, 1243, 1407, 1437, 2030, 2100, 2166
DpnI	GATC	9 cut(s)	381, 508, 573, 819, 858, 1468, 1689, 1890, 2028
DpnII	GATC	9 cut(s)	379, 506, 571, 817, 856, 1466, 1687, 1888, 2026
DrdI	GACNNNNNNGTC	1 cut(s)	928
DriI	GACNNNNNGTC	2 cut(s)	79, 1904
DseDI	GACNNNNNNGTC	1 cut(s)	928
EaeI	YGGCCR	1 cut(s)	1105
Eam1104I	CTCTTC	2 cut(s)	2085, 2593
Eam1105I	GACNNNNNGTC	2 cut(s)	79, 1904
EarI	CTCTTC	2 cut(s)	2085, 2593
EciI	GGCGGA	1 cut(s)	125
Eco130I	CCWWGG	1 cut(s)	533
Eco147I	AGGCCT	3 cut(s)	423, 1236, 1298
Eco24I	GRGCYC	1 cut(s)	20
Eco31I	GGTCTC	1 cut(s)	1539
Eco32I	GATATC	1 cut(s)	1380
Eco47III	AGCGCT	1 cut(s)	618
Eco57I	CTGAAG	1 cut(s)	1251
EcoRI	GAATTC	1 cut(s)	459
EcoRII	CCWGG	4 cut(s)	463, 687, 1529, 1900
EcoRV	GATATC	1 cut(s)	1380
EcoT14I	CCWWGG	1 cut(s)	533
EcoT38I	GRGCYC	1 cut(s)	20
ErhI	CCWWGG	1 cut(s)	533
Esp3I	CGTCTC	1 cut(s)	137
FalI	AAGNNNNNCTT	4 cut(s)	141, 173, 1349, 1381
FaqI	GGGAC	2 cut(s)	1065, 1979
FauNDI	CATATG	2 cut(s)	502, 1792
FbaI	TGATCA	2 cut(s)	856, 1687
FblI	GTMKAC	3 cut(s)	188, 793, 1897
Fnu4HI	GCNGC	8 cut(s)	153, 267, 401, 600, 667, 979, 1641, 1698
FokI	GGATG	2 cut(s)	663, 1525
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	8 cut(s)	153, 267, 401, 600, 667, 979, 1641, 1698
FspBI	CTAG	4 cut(s)	362, 915, 2153, 2553
GlaI	GCGC	2 cut(s)	618, 1016
GluI	GCNGC	8 cut(s)	153, 267, 401, 600, 667, 979, 1641, 1698
GsaI	CCCAGC	1 cut(s)	623
GsuI	CTGGAG	1 cut(s)	565
HaeII	RGCGCY	1 cut(s)	620
HaeIII	GGCC	7 cut(s)	423, 1107, 1236, 1298, 1658, 1841, 2491
HapII	CCGG	8 cut(s)	51, 66, 184, 523, 975, 1146, 2437, 2519
HgaI	GACGC	1 cut(s)	119
HhaI	GCGC	2 cut(s)	619, 1017
Hin6I	GCGC	2 cut(s)	617, 1015
HinP1I	GCGC	2 cut(s)	617, 1015
HincII	GTYRAC	1 cut(s)	1898
HindII	GTYRAC	1 cut(s)	1898
HindIII	AAGCTT	3 cut(s)	561, 1505, 1715
HpaII	CCGG	8 cut(s)	51, 66, 184, 523, 975, 1146, 2437, 2519
HphI	GGTGA	8 cut(s)	347, 842, 866, 1198, 1460, 1461, 1829, 2134
Hpy166II	GTNNAC	5 cut(s)	189, 794, 1820, 1898, 2424
Hpy188III	TCNNGA	6 cut(s)	544, 700, 739, 1229, 1729, 2321
Hpy8I	GTNNAC	5 cut(s)	189, 794, 1820, 1898, 2424
Hpy99I	CGWCG	6 cut(s)	74, 77, 88, 128, 180, 1712
HpyAV	CCTTC	7 cut(s)	1045, 1226, 1391, 1474, 2045, 2205, 2291
HpyCH4III	ACNGT	5 cut(s)	62, 1060, 1309, 2278, 2434
HpyCH4IV	ACGT	2 cut(s)	227, 796
HpyF10VI	GCNNNNNNNGC	7 cut(s)	263, 605, 614, 924, 1295, 1838, 1847
HpyF3I	CTNAG	9 cut(s)	111, 193, 1134, 1243, 1407, 1437, 2030, 2100, 2166
HpySE526I	ACGT	2 cut(s)	227, 796
HspAI	GCGC	2 cut(s)	617, 1015
KpnI	GGTACC	1 cut(s)	2525
Ksp22I	TGATCA	2 cut(s)	856, 1687
Kzo9I	GATC	9 cut(s)	379, 506, 571, 817, 856, 1466, 1687, 1888, 2026
LmnI	GCTCC	2 cut(s)	1178, 2147
Lsp1109I	GCAGC	7 cut(s)	253, 412, 586, 678, 965, 1627, 1709
LweI	GCATC	1 cut(s)	1903
MabI	ACCWGGT	1 cut(s)	1529
MaeI	CTAG	4 cut(s)	362, 915, 2153, 2553
MaeII	ACGT	2 cut(s)	227, 796
MaeIII	GTNAC	8 cut(s)	289, 700, 713, 1192, 1204, 1249, 1459, 1957
MalI	GATC	9 cut(s)	381, 508, 573, 819, 858, 1468, 1689, 1890, 2028
MboI	GATC	9 cut(s)	379, 506, 571, 817, 856, 1466, 1687, 1888, 2026
MfeI	CAATTG	2 cut(s)	345, 903
MflI	RGATCY	4 cut(s)	506, 571, 1888, 2026
MhlI	GDGCHC	4 cut(s)	20, 247, 1501, 2152
MlsI	TGGCCA	1 cut(s)	1107
MluNI	TGGCCA	1 cut(s)	1107
MlyI	GAGTC	7 cut(s)	13, 920, 938, 1047, 1340, 1914, 2566
MmeI	TCCRAC	4 cut(s)	122, 534, 1835, 1888
Mox20I	TGGCCA	1 cut(s)	1107
MroXI	GAANNNNTTC	3 cut(s)	963, 1806, 2060
MscI	TGGCCA	1 cut(s)	1107
MseI	TTAA	9 cut(s)	230, 846, 881, 1256, 1599, 1944, 2292, 2442, 2568
MslI	CAYNNNNRTG	5 cut(s)	590, 698, 1214, 1324, 1999
Msp20I	TGGCCA	1 cut(s)	1107
MspA1I	CMGCKG	1 cut(s)	2221
MspI	CCGG	8 cut(s)	51, 66, 184, 523, 975, 1146, 2437, 2519
MspR9I	CCNGG	5 cut(s)	465, 523, 689, 1531, 1902
MunI	CAATTG	2 cut(s)	345, 903
MvaI	CCWGG	4 cut(s)	465, 689, 1531, 1902
MwoI	GCNNNNNNNGC	7 cut(s)	263, 605, 614, 924, 1295, 1838, 1847
NciI	CCSGG	1 cut(s)	523
NdeI	CATATG	2 cut(s)	502, 1792
NdeII	GATC	9 cut(s)	379, 506, 571, 817, 856, 1466, 1687, 1888, 2026
NlaIV	GGNNCC	6 cut(s)	508, 864, 1180, 1890, 2217, 2523
NmeAIII	GCCGAG	1 cut(s)	593
NmuCI	GTSAC	4 cut(s)	700, 713, 1192, 1204
NspI	RCATGY	3 cut(s)	119, 251, 1329
PaeI	GCATGC	1 cut(s)	119
PceI	AGGCCT	3 cut(s)	423, 1236, 1298
PcsI	WCGNNNNNNNCGW	1 cut(s)	20
PdmI	GAANNNNTTC	3 cut(s)	963, 1806, 2060
PfeI	GAWTC	8 cut(s)	180, 284, 742, 2021, 2125, 2179, 2254, 2330
PfoI	TCCNGGA	1 cut(s)	463
PkrI	GCNGC	8 cut(s)	154, 268, 402, 601, 668, 980, 1642, 1699
PleI	GAGTC	7 cut(s)	12, 919, 937, 1047, 1340, 1913, 2565
PpsI	GAGTC	7 cut(s)	12, 919, 937, 1047, 1340, 1913, 2565
PshAI	GACNNNNGTC	1 cut(s)	1310
PsiI	TTATAA	2 cut(s)	2132, 2576
Psp6I	CCWGG	4 cut(s)	463, 687, 1529, 1900
PspFI	CCCAGC	1 cut(s)	619
PspGI	CCWGG	4 cut(s)	463, 687, 1529, 1900
PspN4I	GGNNCC	6 cut(s)	508, 864, 1180, 1890, 2217, 2523
PspPI	GGNCC	1 cut(s)	1839
PstI	CTGCAG	4 cut(s)	402, 735, 1494, 1852
PsuI	RGATCY	4 cut(s)	506, 571, 1888, 2026
RsaI	GTAC	3 cut(s)	1268, 1950, 2523
RsaNI	GTAC	3 cut(s)	1267, 1949, 2522
RseI	CAYNNNNRTG	5 cut(s)	590, 698, 1214, 1324, 1999
SalI	GTCGAC	1 cut(s)	1896
SaqAI	TTAA	9 cut(s)	230, 846, 881, 1256, 1599, 1944, 2292, 2442, 2568
SatI	GCNGC	8 cut(s)	153, 267, 401, 600, 667, 979, 1641, 1698
Sau3AI	GATC	9 cut(s)	379, 506, 571, 817, 856, 1466, 1687, 1888, 2026
Sau96I	GGNCC	1 cut(s)	1839
SchI	GAGTC	7 cut(s)	13, 920, 938, 1047, 1340, 1914, 2566
ScrFI	CCNGG	5 cut(s)	465, 523, 689, 1531, 1902
SduI	GDGCHC	4 cut(s)	20, 247, 1501, 2152
SexAI	ACCWGGT	1 cut(s)	1529
SfaNI	GCATC	1 cut(s)	1903
SfcI	CTRYAG	5 cut(s)	398, 731, 1490, 1776, 1848
SmiMI	CAYNNNNRTG	5 cut(s)	590, 698, 1214, 1324, 1999
SmlI	CTYRAG	1 cut(s)	1502
SmoI	CTYRAG	1 cut(s)	1502
SphI	GCATGC	1 cut(s)	119
SseBI	AGGCCT	3 cut(s)	423, 1236, 1298
SsiI	CCGC	4 cut(s)	136, 152, 1587, 2219
SspI	AATATT	1 cut(s)	2586
SspMI	CTAG	4 cut(s)	362, 915, 2153, 2553
StuI	AGGCCT	3 cut(s)	423, 1236, 1298
StyD4I	CCNGG	5 cut(s)	463, 521, 687, 1529, 1900
StyI	CCWWGG	1 cut(s)	533
TaaI	ACNGT	5 cut(s)	62, 1060, 1309, 2278, 2434
TaiI	ACGT	2 cut(s)	230, 799
TaqI	TCGA	6 cut(s)	86, 126, 178, 1897, 2209, 2406
TauI	GCSGC	1 cut(s)	155
TfiI	GAWTC	8 cut(s)	180, 284, 742, 2021, 2125, 2179, 2254, 2330
Tru1I	TTAA	9 cut(s)	230, 846, 881, 1256, 1599, 1944, 2292, 2442, 2568
Tru9I	TTAA	9 cut(s)	230, 846, 881, 1256, 1599, 1944, 2292, 2442, 2568
TscAI	CASTG	4 cut(s)	1499, 1634, 1923, 2370
TseFI	GTSAC	4 cut(s)	700, 713, 1192, 1204
TseI	GCWGC	7 cut(s)	266, 400, 599, 666, 978, 1640, 1697
Tsp45I	GTSAC	4 cut(s)	700, 713, 1192, 1204
TspDTI	ATGAA	5 cut(s)	1027, 1541, 1610, 1629, 1809
TspGWI	ACGGA	4 cut(s)	112, 277, 1490, 2054
TspRI	CASTG	4 cut(s)	1499, 1634, 1923, 2370
XapI	RAATTY	4 cut(s)	338, 459, 1157, 2394
XceI	RCATGY	3 cut(s)	119, 251, 1329
XcmI	CCANNNNNNNNNTGG	1 cut(s)	540
XmiI	GTMKAC	3 cut(s)	188, 793, 1897
XmnI	GAANNNNTTC	3 cut(s)	963, 1806, 2060
XspI	CTAG	4 cut(s)	362, 915, 2153, 2553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.