Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0007758

Physical Location & Seq

Genomic Coordinates Forward (+)

40157536 .. 40161940

Gene Structure 4405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG235600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGCGACCATATCCTCCTCCTGCTTCTGCCCTTACGCTATGGCTCGCCCCACCAGAGTCCGAGCCCCTCGCACCCCTTCTTCCAAGAAGCCGATACCGCCCAACCCTAACCCTAATCACAAGCAGCTCAGGCACCGGAACGGCGCCAAGGAGCTGGCCTCCGTCGGAGTTGAGGCCACCACCTACACTCGCCTGCCGCCCAAAGACGACTTCTCTCTCCCTTCCTTGCTGGAGTTCTCCTCCGAAGTGAAGCTCTCCGAGTCGAGCGTTGCGGTGGAGAAGAAGAAGAAGAAGAAGGAGAAGGAGATTGCTGATTTGAGCGACGAGGAGGAGGAGGAGGAGGAAGATGATGGCGGTGACGGTAAATTTGAGGTCTTTGAGGGGAGTTACGATTCTGAATTGGAGGATGAAGAAATTGAAGGGGTTGAGTATGAGTATGAGGAAATTGAGAGGGAAAGCGATGGCAAAGTGGTGAATTTGGATGGTGGTGAGGGTGAATCGGAGGAGGAGGAAGTGAAGGAGAAGGGAGTACCGGCGGTGATGAGGTGTTTTGACCGGGCGAAGATCTATGTGAAGTCAGGGGACGGCGGAAACGGCGTCGTGGCGATGCGGCGGGAGAAGTTCGTGCCTTTGGGGGGACCGTCCGGAGGGGACGGAGGGCGAGGTGGAAATGTGTATATAGAGGTGGATGGGTCGATGAATTCACTGCTGCCGTTTCGAAACAGCGTGCATTTTCGGGCTGGGAGAGGGGACCATGGGAGGGGGCAGTCGCAGAATGGGGCCAAGGGGGAGGATGTGGTGGTCAAGGTGGCGCCGGGGACGGTGATTAGGGAGGCAGGCAAGGAGGAGGTGCTGTTGGAGCTGTTGCATCCGGGGCAGCGTGGTTTGTTGCTGCCTGGAGGGAGAGGTGGGAGAGGGAATGCTTCGTTTAAGTCCGGGGCTAATAAGGTGCCCAGGATTGCTGAGAATGGTGCCGAGGGTCCGGAAATGTGGTTGGACCTGGAGCTAAAGCTAGTTGCAGATGTTGGAATTGTGGGAGCCCCAAATGCAGGGAAAAGCACACTGTTGAGTGTTATAAGTGCTGCTCAGCCAACAATAGCAAATTACCCCTTCACTACTTTACTTCCAAATCTGGGTGTTGTTTCTTTTGACTATGACTCGACGATGGTTGTAGCAGATCTACCGGGTTTACTTGAAGGGGCACACCGGGGTTTCGGATTGGGCCATGAGTTTCTGCGCCACACTGAGAGGTGTTCTGTCTTGGTACATGTTGTTGATGGCTCAGGCCAGCAGCCAGAATTTGAGTATGATGCAGTTCGTCTGGAATTGGAATTGTTTAGTCCTGAAATTGCTGAAAAGCCTTATATAGTCGCTTTTAACAAAATGGACCTTCCAGATGCAAAAGAACAGTGGCCATCATTCAAGGAAAACTTACAAGCTCGCGGGATTCAAGTTTTTTGCATGAGTGCAGTGAAAGGAGAGGGTACTCATGAGGTTATCAGCACTGCTTATCAGCTTCTACGAAGGAGCAAAGTGACCGAGGAGGAATTCAGAGATCCCGTGGATTTAAATCATGTAGCCGATATGGTGCATAAGCAGCAAACCGCCTCTATTAATGAGTTTGAGATCTCTTACGACAGCGGTACCAATACCTGGCATGTTGTGGGATCTGGATTACAACGGTTTGTTCAGATGACAAATTGGCGATATATGGATTCTGAGAGAAGATTCCAACATGTTTTGGATGCTTGTGGTGTAAACAAGAATCTTAAGAAACGTGGTGTCAAAGAAGGTGACACCGTGCTTATTGGAGATATGGAAATGGTGTGGCATGATTCTGTTTCTGGTCCATCAAATTTAAAGAAAGGATCTGCAGAAACAACCAAGTGGGCTCAGTTTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009528 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009657 GO:0009658 GO:0009668 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010027 GO:0010154 GO:0010467 GO:0016020 GO:0016043 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019866 GO:0022414 GO:0022613 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042170 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061024 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1967 GTP1_OBG MMR_HSR1

Protein Analysis

634

Amino Acids

69.62

Weight (kDa)

5.18

Isoelectric Point (pI)

44.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP1_OBG	PF01018	185 - 338	2.9e-53	GTP1/OBG
MMR_HSR1	PF01926	341 - 461	1.7e-23	50S ribosome-binding GTPase
FeoB_N	PF02421	342 - 501	4.3e-12	Ferrous iron transport protein B
DUF1967	PF09269	541 - 610	1.5e-21	Domain of unknown function (DUF1967)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007758)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18570
fragaria_vesca	FvH4_4g17620 FvH4_4g17620 FvH4_4g17620
malus_domestica	MD16G1172900.v1.1
prunus_persica	Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1
pyrus_communis	pycom16g14500
rosa_chinensis	RchiOBHm_Chr4g0421541
rosa_laevigata	RLG00000007669
rosa_multiflora	Rmu_sc0022469.1_g000001
rosa_roxburghii	Rroxscaffold_5G00363790
rosa_rugosa	Rorug04G0172500 Rorug04G0172600
rosa_samantha	Rh4AG232900 Rh4BG235600 Rh4CG247300
rosa_wichuraiana	Rw4G020110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1076
Acc65I	GGTACC	1 cut(s)	1643
AccB1I	GGYRCC	6 cut(s)	132, 143, 811, 949, 971, 1643
AccB7I	CCANNNNNTGG	1 cut(s)	1653
AccII	CGCG	1 cut(s)	1443
AccIII	TCCGGA	2 cut(s)	644, 982
AclWI	GGATC	3 cut(s)	1550, 1675, 1876
AcoI	YGGCCR	1 cut(s)	1412
AcsI	RAATTY	6 cut(s)	365, 475, 700, 1298, 1547, 1855
AcyI	GRCGYC	3 cut(s)	144, 597, 812
AfaI	GTAC	4 cut(s)	531, 1266, 1486, 1645
AfiI	CCNNNNNNNGG	6 cut(s)	635, 647, 760, 1049, 1133, 1653
AflII	CTTAAG	1 cut(s)	1769
AflIII	ACRYGT	2 cut(s)	1267, 1735
AgsI	TTSAA	4 cut(s)	419, 1196, 1423, 1451
AjnI	CCWGG	4 cut(s)	895, 953, 999, 1652
AjuI	GAANNNNNNNTTGG	2 cut(s)	194, 226
AluBI	AGCT	8 cut(s)	127, 154, 253, 862, 1006, 1012, 1439, 1516
AluI	AGCT	8 cut(s)	127, 154, 253, 862, 1006, 1012, 1439, 1516
AlwI	GGATC	3 cut(s)	1550, 1675, 1876
Aor13HI	TCCGGA	2 cut(s)	644, 982
AoxI	GGCC	6 cut(s)	156, 174, 780, 1222, 1285, 1412
ApeKI	GCWGC	7 cut(s)	124, 709, 877, 892, 1082, 1291, 1597
ApoI	RAATTY	6 cut(s)	365, 475, 700, 1298, 1547, 1855
ArsI	GACNNNNNNTTYG	2 cut(s)	350, 382
AseI	ATTAAT	1 cut(s)	1614
Asp718I	GGTACC	1 cut(s)	1643
AspLEI	GCGC	3 cut(s)	146, 814, 1239
AspS9I	GGNCC	8 cut(s)	638, 751, 780, 980, 997, 1222, 1387, 1847
AsuC2I	CCSGG	6 cut(s)	557, 816, 873, 937, 1185, 1208
AsuHPI	GGTGA	7 cut(s)	368, 484, 500, 506, 550, 835, 1805
AsuII	TTCGAA	1 cut(s)	718
AvaII	GGWCC	6 cut(s)	638, 751, 980, 997, 1387, 1847
BaeGI	GKGCMC	2 cut(s)	954, 1204
BaeI	ACNNNNGTAYC	2 cut(s)	1627, 1660
BalI	TGGCCA	1 cut(s)	1414
BanI	GGYRCC	6 cut(s)	132, 143, 811, 949, 971, 1643
BanII	GRGCYC	3 cut(s)	67, 1042, 1894
BbvI	GCAGC	7 cut(s)	136, 696, 879, 889, 1069, 1303, 1609
BccI	CCATC	8 cut(s)	344, 455, 476, 683, 1159, 1271, 1423, 1858
BceAI	ACGGC	4 cut(s)	157, 601, 610, 697
BciT130I	CCWGG	4 cut(s)	897, 955, 1001, 1654
BcnI	CCSGG	6 cut(s)	557, 816, 873, 937, 1185, 1208
BfaI	CTAG	1 cut(s)	1013
BfmI	CTRYAG	1 cut(s)	1872
BfoI	RGCGCY	2 cut(s)	147, 815
BfrI	CTTAAG	1 cut(s)	1769
BglII	AGATCT	3 cut(s)	564, 1177, 1626
BisI	GCNGC	9 cut(s)	125, 197, 611, 710, 878, 893, 1083, 1292, 1598
BlpI	GCTNAGC	1 cut(s)	1086
BlsI	GCNGC	9 cut(s)	126, 198, 612, 711, 879, 894, 1084, 1293, 1599
Bme18I	GGWCC	6 cut(s)	638, 751, 980, 997, 1387, 1847
BmgT120I	GGNCC	8 cut(s)	638, 751, 780, 980, 997, 1222, 1387, 1847
BmsI	GCATC	5 cut(s)	597, 877, 1300, 1387, 1735
BplI	GAGNNNNNCTC	4 cut(s)	143, 175, 224, 256
BpmI	CTGGAG	3 cut(s)	251, 918, 1022
Bpu10I	CCTNAGC	2 cut(s)	128, 1282
Bpu1102I	GCTNAGC	1 cut(s)	1086
Bpu14I	TTCGAA	1 cut(s)	718
BpuMI	CCSGG	6 cut(s)	557, 816, 873, 937, 1185, 1208
BsaBI	GATNNNNATC	1 cut(s)	1569
BsaHI	GRCGYC	3 cut(s)	144, 597, 812
BsaWI	WCCGGW	3 cut(s)	135, 644, 982
BsaXI	ACNNNNNCTCC	2 cut(s)	839, 869
Bsc4I	CCNNNNNNNGG	6 cut(s)	635, 647, 760, 1049, 1133, 1653
Bse118I	RCCGGY	1 cut(s)	532
Bse8I	GATNNNNATC	1 cut(s)	1569
BseAI	TCCGGA	2 cut(s)	644, 982
BseBI	CCWGG	4 cut(s)	897, 955, 1001, 1654
BseGI	GGATG	6 cut(s)	412, 487, 694, 799, 868, 1750
BseJI	GATNNNNATC	1 cut(s)	1569
BseLI	CCNNNNNNNGG	6 cut(s)	635, 647, 760, 1049, 1133, 1653
BseMII	CTCAG	6 cut(s)	142, 954, 1100, 1236, 1296, 1710
BseSI	GKGCMC	2 cut(s)	954, 1204
BseXI	GCAGC	7 cut(s)	136, 696, 879, 889, 1069, 1303, 1609
BseYI	CCCAGC	1 cut(s)	740
BsgI	GTGCAG	1 cut(s)	1488
Bsh1236I	CGCG	1 cut(s)	1443
BshFI	GGCC	6 cut(s)	158, 176, 782, 1224, 1287, 1414
BshNI	GGYRCC	6 cut(s)	132, 143, 811, 949, 971, 1643
BslFI	GGGAC	5 cut(s)	596, 651, 665, 764, 832
BslI	CCNNNNNNNGG	6 cut(s)	635, 647, 760, 1049, 1133, 1653
BsmFI	GGGAC	5 cut(s)	596, 651, 665, 764, 832
BsmI	GAATGC	1 cut(s)	925
BsnI	GGCC	6 cut(s)	158, 176, 782, 1224, 1287, 1414
Bsp119I	TTCGAA	1 cut(s)	718
Bsp1286I	GDGCHC	5 cut(s)	67, 954, 1042, 1204, 1894
Bsp13I	TCCGGA	2 cut(s)	644, 982
Bsp143I	GATC	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
Bsp1720I	GCTNAGC	1 cut(s)	1086
Bsp19I	CCATGG	1 cut(s)	754
BspANI	GGCC	6 cut(s)	158, 176, 782, 1224, 1287, 1414
BspCNI	CTCAG	6 cut(s)	141, 955, 1099, 1237, 1295, 1711
BspEI	TCCGGA	2 cut(s)	644, 982
BspFNI	CGCG	1 cut(s)	1443
BspHI	TCATGA	1 cut(s)	1489
BspMAI	CTGCAG	1 cut(s)	1876
BspPI	GGATC	3 cut(s)	1550, 1675, 1876
BspT104I	TTCGAA	1 cut(s)	718
BspT107I	GGYRCC	6 cut(s)	132, 143, 811, 949, 971, 1643
BspTI	CTTAAG	1 cut(s)	1769
BsrFI	RCCGGY	1 cut(s)	532
BssAI	RCCGGY	1 cut(s)	532
BssMI	GATC	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
BssNI	GRCGYC	3 cut(s)	144, 597, 812
BssT1I	CCWWGG	3 cut(s)	147, 754, 783
Bst2UI	CCWGG	4 cut(s)	897, 955, 1001, 1654
Bst4CI	ACNGT	7 cut(s)	362, 642, 823, 1065, 1410, 1683, 1801
BstACI	GRCGYC	3 cut(s)	144, 597, 812
BstAFI	CTTAAG	1 cut(s)	1769
BstBI	TTCGAA	1 cut(s)	718
BstC8I	GCNNGC	7 cut(s)	46, 156, 194, 728, 838, 1289, 1441
BstDEI	CTNAG	7 cut(s)	128, 963, 1086, 1245, 1282, 1719, 1893
BstDSI	CCRYGG	2 cut(s)	754, 1560
BstF5I	GGATG	6 cut(s)	412, 487, 694, 799, 868, 1750
BstFNI	CGCG	1 cut(s)	1443
BstH2I	RGCGCY	2 cut(s)	147, 815
BstHHI	GCGC	3 cut(s)	146, 814, 1239
BstKTI	GATC	6 cut(s)	567, 1180, 1558, 1629, 1670, 1871
BstMBI	GATC	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
BstMWI	GCNNNNNNNGC	7 cut(s)	97, 130, 594, 859, 874, 1046, 1597
BstNI	CCWGG	4 cut(s)	897, 955, 1001, 1654
BstNSI	RCATGY	3 cut(s)	1271, 1661, 1739
BstSFI	CTRYAG	1 cut(s)	1872
BstSLI	GKGCMC	2 cut(s)	954, 1204
BstUI	CGCG	1 cut(s)	1443
BstV1I	GCAGC	7 cut(s)	136, 696, 879, 889, 1069, 1303, 1609
BstX2I	RGATCY	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
BstXI	CCANNNNNNTGG	1 cut(s)	154
BstYI	RGATCY	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
BsuRI	GGCC	6 cut(s)	158, 176, 782, 1224, 1287, 1414
BtgI	CCRYGG	2 cut(s)	754, 1560
BtgZI	GCGATG	2 cut(s)	474, 620
BtsCI	GGATG	6 cut(s)	412, 487, 694, 799, 868, 1750
BtsI	GCAGTG	3 cut(s)	704, 1476, 1503
BtsIMutI	CAGTG	6 cut(s)	704, 1061, 1242, 1415, 1476, 1503
Cac8I	GCNNGC	7 cut(s)	46, 156, 194, 728, 838, 1289, 1441
CciI	TCATGA	1 cut(s)	1489
CfoI	GCGC	3 cut(s)	146, 814, 1239
Cfr10I	RCCGGY	1 cut(s)	532
Cfr13I	GGNCC	8 cut(s)	638, 751, 780, 980, 997, 1222, 1387, 1847
CseI	GACGC	1 cut(s)	586
Csp6I	GTAC	4 cut(s)	530, 1265, 1485, 1644
CviAII	CATG	9 cut(s)	755, 1226, 1268, 1462, 1490, 1574, 1658, 1736, 1832
CviQI	GTAC	4 cut(s)	530, 1265, 1485, 1644
DdeI	CTNAG	7 cut(s)	128, 963, 1086, 1245, 1282, 1719, 1893
DinI	GGCGCC	2 cut(s)	145, 813
DpnI	GATC	6 cut(s)	566, 1179, 1557, 1628, 1669, 1870
DpnII	GATC	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
DraI	TTTAAA	2 cut(s)	1569, 1860
EaeI	YGGCCR	1 cut(s)	1412
EciI	GGCGGA	1 cut(s)	603
Eco130I	CCWWGG	3 cut(s)	147, 754, 783
Eco24I	GRGCYC	3 cut(s)	67, 1042, 1894
Eco47I	GGWCC	6 cut(s)	638, 751, 980, 997, 1387, 1847
EcoRI	GAATTC	2 cut(s)	700, 1547
EcoRII	CCWGG	4 cut(s)	895, 953, 999, 1652
EcoT14I	CCWWGG	3 cut(s)	147, 754, 783
EcoT38I	GRGCYC	3 cut(s)	67, 1042, 1894
EgeI	GGCGCC	2 cut(s)	145, 813
EheI	GGCGCC	2 cut(s)	145, 813
ErhI	CCWWGG	3 cut(s)	147, 754, 783
FaeI	CATG	9 cut(s)	758, 1229, 1271, 1465, 1493, 1577, 1661, 1739, 1835
FalI	AAGNNNNNCTT	2 cut(s)	1415, 1447
FaqI	GGGAC	5 cut(s)	596, 651, 665, 764, 832
FatI	CATG	9 cut(s)	754, 1225, 1267, 1461, 1489, 1573, 1657, 1735, 1831
FauI	CCCGC	2 cut(s)	606, 1436
Fnu4HI	GCNGC	9 cut(s)	125, 197, 611, 710, 878, 893, 1083, 1292, 1598
FokI	GGATG	6 cut(s)	419, 494, 701, 806, 855, 1757
FriOI	GRGCYC	3 cut(s)	67, 1042, 1894
Fsp4HI	GCNGC	9 cut(s)	125, 197, 611, 710, 878, 893, 1083, 1292, 1598
FspBI	CTAG	1 cut(s)	1013
GlaI	GCGC	3 cut(s)	145, 813, 1238
GluI	GCNGC	9 cut(s)	125, 197, 611, 710, 878, 893, 1083, 1292, 1598
GsaI	CCCAGC	1 cut(s)	744
GsuI	CTGGAG	3 cut(s)	251, 918, 1022
HaeII	RGCGCY	2 cut(s)	147, 815
HaeIII	GGCC	6 cut(s)	158, 176, 782, 1224, 1287, 1414
HgaI	GACGC	1 cut(s)	586
HhaI	GCGC	3 cut(s)	146, 814, 1239
Hin1I	GRCGYC	3 cut(s)	144, 597, 812
Hin1II	CATG	9 cut(s)	758, 1229, 1271, 1465, 1493, 1577, 1661, 1739, 1835
Hin6I	GCGC	3 cut(s)	144, 812, 1237
HinP1I	GCGC	3 cut(s)	144, 812, 1237
HphI	GGTGA	7 cut(s)	368, 484, 500, 506, 550, 835, 1805
Hpy166II	GTNNAC	2 cut(s)	1190, 1759
Hpy188III	TCNNGA	7 cut(s)	645, 983, 1322, 1343, 1394, 1490, 1671
Hpy8I	GTNNAC	2 cut(s)	1190, 1759
Hpy99I	CGWCG	4 cut(s)	167, 326, 602, 1165
HpyCH4III	ACNGT	7 cut(s)	362, 642, 823, 1065, 1410, 1683, 1801
HpyCH4IV	ACGT	1 cut(s)	1777
HpyF10VI	GCNNNNNNNGC	7 cut(s)	97, 130, 594, 859, 874, 1046, 1597
HpyF3I	CTNAG	7 cut(s)	128, 963, 1086, 1245, 1282, 1719, 1893
HpySE526I	ACGT	1 cut(s)	1777
Hsp92I	GRCGYC	3 cut(s)	144, 597, 812
Hsp92II	CATG	9 cut(s)	758, 1229, 1271, 1465, 1493, 1577, 1661, 1739, 1835
HspAI	GCGC	3 cut(s)	144, 812, 1237
KasI	GGCGCC	2 cut(s)	143, 811
Kpn2I	TCCGGA	2 cut(s)	644, 982
KpnI	GGTACC	1 cut(s)	1647
Kzo9I	GATC	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
LmnI	GCTCC	5 cut(s)	151, 859, 1003, 1037, 1527
Lsp1109I	GCAGC	7 cut(s)	136, 696, 879, 889, 1069, 1303, 1609
LweI	GCATC	5 cut(s)	597, 877, 1300, 1387, 1735
MaeI	CTAG	1 cut(s)	1013
MaeII	ACGT	1 cut(s)	1777
MaeIII	GTNAC	4 cut(s)	356, 386, 1534, 1793
MalI	GATC	6 cut(s)	566, 1179, 1557, 1628, 1669, 1870
MboI	GATC	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
MflI	RGATCY	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
MhlI	GDGCHC	5 cut(s)	67, 954, 1042, 1204, 1894
MlsI	TGGCCA	1 cut(s)	1414
MluNI	TGGCCA	1 cut(s)	1414
Mly113I	GGCGCC	2 cut(s)	144, 812
MlyI	GAGTC	3 cut(s)	66, 269, 1151
MmeI	TCCRAC	5 cut(s)	145, 837, 975, 1006, 1756
Mox20I	TGGCCA	1 cut(s)	1414
MroI	TCCGGA	2 cut(s)	644, 982
MscI	TGGCCA	1 cut(s)	1414
MseI	TTAA	7 cut(s)	930, 1377, 1568, 1614, 1770, 1859, 1899
Msp20I	TGGCCA	1 cut(s)	1414
MspA1I	CMGCKG	1 cut(s)	1641
MspCI	CTTAAG	1 cut(s)	1769
Mva1269I	GAATGC	1 cut(s)	925
MvaI	CCWGG	4 cut(s)	897, 955, 1001, 1654
MvnI	CGCG	1 cut(s)	1443
MwoI	GCNNNNNNNGC	7 cut(s)	97, 130, 594, 859, 874, 1046, 1597
NarI	GGCGCC	2 cut(s)	144, 812
NciI	CCSGG	6 cut(s)	557, 816, 873, 937, 1185, 1208
NcoI	CCATGG	1 cut(s)	754
NdeII	GATC	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
NlaIII	CATG	9 cut(s)	758, 1229, 1271, 1465, 1493, 1577, 1661, 1739, 1835
NmeAIII	GCCGAG	1 cut(s)	1000
NmuCI	GTSAC	3 cut(s)	356, 1534, 1793
NspI	RCATGY	3 cut(s)	1271, 1661, 1739
NspV	TTCGAA	1 cut(s)	718
PagI	TCATGA	1 cut(s)	1489
PciI	ACATGT	2 cut(s)	1267, 1735
PctI	GAATGC	1 cut(s)	925
PfeI	GAWTC	7 cut(s)	392, 497, 1447, 1715, 1728, 1765, 1835
PflMI	CCANNNNNTGG	1 cut(s)	1653
PkrI	GCNGC	9 cut(s)	126, 198, 612, 711, 879, 894, 1084, 1293, 1599
PleI	GAGTC	3 cut(s)	65, 268, 1151
PluTI	GGCGCC	2 cut(s)	147, 815
PpsI	GAGTC	3 cut(s)	65, 268, 1151
PscI	ACATGT	2 cut(s)	1267, 1735
PshBI	ATTAAT	1 cut(s)	1614
PsiI	TTATAA	1 cut(s)	1076
Psp6I	CCWGG	4 cut(s)	895, 953, 999, 1652
PspFI	CCCAGC	1 cut(s)	740
PspGI	CCWGG	4 cut(s)	895, 953, 999, 1652
PspPI	GGNCC	8 cut(s)	638, 751, 780, 980, 997, 1222, 1387, 1847
PstI	CTGCAG	1 cut(s)	1876
PsuI	RGATCY	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
RsaI	GTAC	4 cut(s)	531, 1266, 1486, 1645
RsaNI	GTAC	4 cut(s)	530, 1265, 1485, 1644
SaqAI	TTAA	7 cut(s)	930, 1377, 1568, 1614, 1770, 1859, 1899
SatI	GCNGC	9 cut(s)	125, 197, 611, 710, 878, 893, 1083, 1292, 1598
Sau3AI	GATC	6 cut(s)	564, 1177, 1555, 1626, 1667, 1868
Sau96I	GGNCC	8 cut(s)	638, 751, 780, 980, 997, 1222, 1387, 1847
SchI	GAGTC	3 cut(s)	66, 269, 1151
SduI	GDGCHC	5 cut(s)	67, 954, 1042, 1204, 1894
SfaNI	GCATC	5 cut(s)	597, 877, 1300, 1387, 1735
SfcI	CTRYAG	1 cut(s)	1872
SfoI	GGCGCC	2 cut(s)	145, 813
SfuI	TTCGAA	1 cut(s)	718
SinI	GGWCC	6 cut(s)	638, 751, 980, 997, 1387, 1847
SmiI	ATTTAAAT	1 cut(s)	1569
SmlI	CTYRAG	1 cut(s)	1769
SmoI	CTYRAG	1 cut(s)	1769
SspDI	GGCGCC	2 cut(s)	143, 811
SspMI	CTAG	1 cut(s)	1013
StyI	CCWWGG	3 cut(s)	147, 754, 783
SwaI	ATTTAAAT	1 cut(s)	1569
TaaI	ACNGT	7 cut(s)	362, 642, 823, 1065, 1410, 1683, 1801
TaiI	ACGT	1 cut(s)	1780
TaqI	TCGA	4 cut(s)	263, 695, 718, 1160
TaqII	GACCGA	1 cut(s)	1553
TauI	GCSGC	2 cut(s)	199, 613
TfiI	GAWTC	7 cut(s)	392, 497, 1447, 1715, 1728, 1765, 1835
Tru1I	TTAA	7 cut(s)	930, 1377, 1568, 1614, 1770, 1859, 1899
Tru9I	TTAA	7 cut(s)	930, 1377, 1568, 1614, 1770, 1859, 1899
TscAI	CASTG	6 cut(s)	711, 1068, 1249, 1415, 1476, 1510
TseFI	GTSAC	3 cut(s)	356, 1534, 1793
TseI	GCWGC	7 cut(s)	124, 709, 877, 892, 1082, 1291, 1597
Tsp45I	GTSAC	3 cut(s)	356, 1534, 1793
TspDTI	ATGAA	2 cut(s)	423, 713
TspGWI	ACGGA	2 cut(s)	151, 669
TspRI	CASTG	6 cut(s)	711, 1068, 1249, 1415, 1476, 1510
Van91I	CCANNNNNTGG	1 cut(s)	1653
Vha464I	CTTAAG	1 cut(s)	1769
VpaK11BI	GGWCC	6 cut(s)	638, 751, 980, 997, 1387, 1847
VspI	ATTAAT	1 cut(s)	1614
XapI	RAATTY	6 cut(s)	365, 475, 700, 1298, 1547, 1855
XceI	RCATGY	3 cut(s)	1271, 1661, 1739
XspI	CTAG	1 cut(s)	1013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.