Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0007758

Physical Location & Seq

Genomic Coordinates Reverse (-)

43797116 .. 43802249

Gene Structure 5134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G020110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGCGACCATATCCTCCTCCTGCTTCTGCCCTTACGCTATGGCTCGCCCCACCAGAGTTCGAGCCCCTCGCACCCCTTCTTCAAAGAAGCCGATACCGCCCAACCCGAACCCTAATCACAAGCAGCTCAGGCACCGGAACGGCGCCAAGGAGCTGGCCTCCGTCGGAGTTGAGGCCACCACCTACACTCGCCTGCCGCCCAAAGACGACTTCTCTCTCCCTTCCTTGCTGGAGTTCTCCTCCGAAGTGAAGCTCTCCGAGTCCAGCGTTGCGGTGGAGAAGGAGAAGAAGGAGAAGGAGGTTGCTGATTTGAGCGACGAGGAGGATGAAGAAATTGAGGTCTTTGAGGGGAGTTACGATTCTGAATTGGAGGATGAAGAAATTGAAGGGGTTGAGTATGAGTATGAGGAAATTGAAAGGGAAAGCGATGGCAAAGTGGTGAATTTGGATGGTGGTGAGGGTGAATCGGAGGAGGAGGAAGTGAAGGAGAAGGGAGTACCGGCGGTGATGAGGTGTTTTGACCGGGCGAAGATCTACGTCAAGTCAGGGGACGGCGGAAACGGCGTCGTGGCGATGCGGCGGGAGAAGTTCGTGCCTTTGGGGGGCCCGTCCGGAGGGGACGGAGGGCGAGGTGGAAATGTGTATATAGAGGTGGATGGGTCGATGAATTCGCTGCTGCCGTTTCGAAACAGCGTGCATTTTCGGGCTGGGAGAGGGGACCATGGGAGGGGGCAGTCGCAGAATGGGGCCAAGGGGGAGGATGTGGTGGTCAAGGTGGCGCCGGGGACGGTCATTAGGGAGGCAGGCAAGGAGGAGGTGCTGTTGGAGCTGTTGCATCCGGGGCAGCGTGGTTTGTTGCTGCCTGGAGGCAGAGGTGGGAGAGGGAATGCTTCGTTTAAGTCCGGGGCTAATAAGGTGCCCAGGATTGCTGAGAATGGTGCCGAGGGTCCCGAAATGTGGTTGGACCTGGAGCTAAAGCTAGTTGCAGATGTTGGAATTGTGGGAGCCCCAAATGCAGGGAAAAGCACACTGTTGAGTGTTATAAGTGCTGCTCAGCCAACAATAGCAAATTACCCCTTCACTACTTTACTTCCAAATCTGGGTGTTGTTTCTTTTGACTATGACTCGACGATGGTTGTAGCAGATCTACCGGGTTTACTTGAAGGTGCACACCGGGGTTTCGGATTGGGCCATGAGTTTCTGCGCCACACTGAGAGGTGTTCTGTCTTGGTACATGTTGTTGATGGCTCAGGCCAGCAGCCAGAATTTGAGTATGATGCAGTTCGTCTGGAATTGGAATTGTTTAGTCCTGAAATTGCTGAAAAGCCTTATATAGTCGCTTTTAACAAAATGGACCTTCCAGATGCAAAAGAACAGTGGCCATCATTCAAGAAAAACTTACAAGCTCGCGGGATTCAAGTTTTTTGCATGAGTGCAGTGAAAGGAGAGGGTACTCATGAGGTTATCAGCACTGCTTATCAGCTTCTACGAAGGAGCAAAGTGACCGAGGAGGAATTCAGAGAAGATCCCGTGGATTTAAATCATGTAGCCGATATGGTGCATAAGCAGCAAACCGCCTCTATTAATGAGTTTGAGATCTCTTACGACAGCGGTACCAATACCTGGCATGTTGTGGGATCTGGATTACAACGGTTTGTTCAGATGACAAATTGGCGATATATGGATTCTGAGAGAAGATTCCAACATGTTTTGGATGCTTGTGGTGTAAACAAGAATCTTAAGAAACGCGGTGTCAAAGAAGGTGACACCGTGCTTATTGGAGATATGGAAATGGTGTGGCATGATTCTGTTTCTGGTCCATCAAATTTAAAGAAAGGATATGCAGAAACAACCAAGTGGGCTCAGTTTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009528 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009657 GO:0009658 GO:0009668 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010027 GO:0010154 GO:0010467 GO:0016020 GO:0016043 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019866 GO:0022414 GO:0022613 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042170 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061024 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1967 GTP1_OBG MMR_HSR1

Protein Analysis

624

Amino Acids

68.6

Weight (kDa)

5.2

Isoelectric Point (pI)

43.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP1_OBG	PF01018	174 - 327	2.8e-53	GTP1/OBG
MMR_HSR1	PF01926	330 - 450	1.6e-23	50S ribosome-binding GTPase
FeoB_N	PF02421	331 - 490	3e-12	Ferrous iron transport protein B
DUF1967	PF09269	531 - 600	1.5e-21	Domain of unknown function (DUF1967)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007758)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18570
fragaria_vesca	FvH4_4g17620 FvH4_4g17620 FvH4_4g17620
malus_domestica	MD16G1172900.v1.1
prunus_persica	Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1 Prupe.1G139700_v2.0.a1
pyrus_communis	pycom16g14500
rosa_chinensis	RchiOBHm_Chr4g0421541
rosa_laevigata	RLG00000007669
rosa_multiflora	Rmu_sc0022469.1_g000001
rosa_roxburghii	Rroxscaffold_5G00363790
rosa_rugosa	Rorug04G0172500 Rorug04G0172600
rosa_samantha	Rh4AG232900 Rh4BG235600 Rh4CG247300
rosa_wichuraiana	Rw4G020110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1043
Acc65I	GGTACC	1 cut(s)	1613
AccB1I	GGYRCC	6 cut(s)	132, 143, 778, 916, 938, 1613
AccB7I	CCANNNNNTGG	1 cut(s)	1623
AccII	CGCG	2 cut(s)	1410, 1749
AccIII	TCCGGA	1 cut(s)	611
AclWI	GGATC	2 cut(s)	1520, 1645
AcoI	YGGCCR	1 cut(s)	1379
AcsI	RAATTY	5 cut(s)	442, 667, 1265, 1514, 1825
AcyI	GRCGYC	3 cut(s)	144, 564, 779
AfaI	GTAC	4 cut(s)	498, 1233, 1453, 1615
AfiI	CCNNNNNNNGG	7 cut(s)	602, 614, 727, 957, 1016, 1100, 1623
AflII	CTTAAG	1 cut(s)	1739
AflIII	ACRYGT	2 cut(s)	1234, 1705
AgsI	TTSAA	6 cut(s)	84, 386, 416, 1163, 1390, 1418
AjnI	CCWGG	4 cut(s)	862, 920, 966, 1622
AjuI	GAANNNNNNNTTGG	2 cut(s)	194, 226
AluBI	AGCT	8 cut(s)	127, 154, 253, 829, 973, 979, 1406, 1483
AluI	AGCT	8 cut(s)	127, 154, 253, 829, 973, 979, 1406, 1483
Alw21I	GWGCWC	1 cut(s)	1171
Alw44I	GTGCAC	1 cut(s)	1167
AlwI	GGATC	2 cut(s)	1520, 1645
Aor13HI	TCCGGA	1 cut(s)	611
AoxI	GGCC	7 cut(s)	156, 174, 604, 747, 1189, 1252, 1379
ApaI	GGGCCC	1 cut(s)	608
ApaLI	GTGCAC	1 cut(s)	1167
ApeKI	GCWGC	8 cut(s)	124, 673, 676, 844, 859, 1049, 1258, 1567
ApoI	RAATTY	5 cut(s)	442, 667, 1265, 1514, 1825
AseI	ATTAAT	1 cut(s)	1584
Asp718I	GGTACC	1 cut(s)	1613
AspLEI	GCGC	3 cut(s)	146, 781, 1206
AspS9I	GGNCC	9 cut(s)	604, 605, 718, 747, 947, 964, 1189, 1354, 1817
AsuC2I	CCSGG	6 cut(s)	524, 783, 840, 904, 1152, 1175
AsuHPI	GGTGA	5 cut(s)	451, 467, 473, 517, 1775
AsuII	TTCGAA	1 cut(s)	685
AvaII	GGWCC	5 cut(s)	718, 947, 964, 1354, 1817
BaeGI	GKGCMC	3 cut(s)	608, 921, 1171
BaeI	ACNNNNGTAYC	2 cut(s)	1597, 1630
BalI	TGGCCA	1 cut(s)	1381
BanI	GGYRCC	6 cut(s)	132, 143, 778, 916, 938, 1613
BanII	GRGCYC	4 cut(s)	67, 608, 1009, 1864
Bbv12I	GWGCWC	1 cut(s)	1171
BbvI	GCAGC	8 cut(s)	136, 660, 663, 846, 856, 1036, 1270, 1579
BccI	CCATC	7 cut(s)	422, 443, 650, 1126, 1238, 1390, 1828
BceAI	ACGGC	4 cut(s)	157, 568, 577, 664
BciT130I	CCWGG	4 cut(s)	864, 922, 968, 1624
BcnI	CCSGG	6 cut(s)	524, 783, 840, 904, 1152, 1175
BfaI	CTAG	1 cut(s)	980
BfoI	RGCGCY	2 cut(s)	147, 782
BfrI	CTTAAG	1 cut(s)	1739
BglII	AGATCT	3 cut(s)	531, 1144, 1596
BlpI	GCTNAGC	1 cut(s)	1053
Bme18I	GGWCC	5 cut(s)	718, 947, 964, 1354, 1817
BmgT120I	GGNCC	9 cut(s)	604, 605, 718, 747, 947, 964, 1189, 1354, 1817
BmsI	GCATC	5 cut(s)	564, 844, 1267, 1354, 1705
BplI	GAGNNNNNCTC	4 cut(s)	143, 175, 224, 256
BpmI	CTGGAG	3 cut(s)	251, 885, 989
Bpu10I	CCTNAGC	2 cut(s)	128, 1249
Bpu1102I	GCTNAGC	1 cut(s)	1053
Bpu14I	TTCGAA	1 cut(s)	685
BpuMI	CCSGG	6 cut(s)	524, 783, 840, 904, 1152, 1175
BsaBI	GATNNNNATC	1 cut(s)	1539
BsaHI	GRCGYC	3 cut(s)	144, 564, 779
BsaWI	WCCGGW	2 cut(s)	135, 611
BsaXI	ACNNNNNCTCC	2 cut(s)	806, 836
Bsc4I	CCNNNNNNNGG	7 cut(s)	602, 614, 727, 957, 1016, 1100, 1623
Bse118I	RCCGGY	1 cut(s)	499
Bse8I	GATNNNNATC	1 cut(s)	1539
BseAI	TCCGGA	1 cut(s)	611
BseBI	CCWGG	4 cut(s)	864, 922, 968, 1624
BseGI	GGATG	7 cut(s)	331, 379, 454, 661, 766, 835, 1720
BseJI	GATNNNNATC	1 cut(s)	1539
BseLI	CCNNNNNNNGG	7 cut(s)	602, 614, 727, 957, 1016, 1100, 1623
BseMII	CTCAG	6 cut(s)	142, 921, 1067, 1203, 1263, 1680
BseRI	GAGGAG	7 cut(s)	7, 229, 335, 485, 488, 827, 1523
BseSI	GKGCMC	3 cut(s)	608, 921, 1171
BseXI	GCAGC	8 cut(s)	136, 660, 663, 846, 856, 1036, 1270, 1579
BseYI	CCCAGC	1 cut(s)	707
BsgI	GTGCAG	1 cut(s)	1455
Bsh1236I	CGCG	2 cut(s)	1410, 1749
BshFI	GGCC	7 cut(s)	158, 176, 606, 749, 1191, 1254, 1381
BshNI	GGYRCC	6 cut(s)	132, 143, 778, 916, 938, 1613
BsiHKAI	GWGCWC	1 cut(s)	1171
BsiSI	CCGG	9 cut(s)	136, 500, 523, 612, 782, 839, 903, 1151, 1174
BslFI	GGGAC	5 cut(s)	563, 632, 731, 799, 933
BslI	CCNNNNNNNGG	7 cut(s)	602, 614, 727, 957, 1016, 1100, 1623
BsmFI	GGGAC	5 cut(s)	563, 632, 731, 799, 933
BsmI	GAATGC	1 cut(s)	892
BsnI	GGCC	7 cut(s)	158, 176, 606, 749, 1191, 1254, 1381
Bsp119I	TTCGAA	1 cut(s)	685
Bsp120I	GGGCCC	1 cut(s)	604
Bsp1286I	GDGCHC	6 cut(s)	67, 608, 921, 1009, 1171, 1864
Bsp13I	TCCGGA	1 cut(s)	611
Bsp143I	GATC	5 cut(s)	531, 1144, 1525, 1596, 1637
Bsp1720I	GCTNAGC	1 cut(s)	1053
Bsp19I	CCATGG	1 cut(s)	721
BspANI	GGCC	7 cut(s)	158, 176, 606, 749, 1191, 1254, 1381
BspCNI	CTCAG	6 cut(s)	141, 922, 1066, 1204, 1262, 1681
BspEI	TCCGGA	1 cut(s)	611
BspFNI	CGCG	2 cut(s)	1410, 1749
BspHI	TCATGA	1 cut(s)	1456
BspPI	GGATC	2 cut(s)	1520, 1645
BspT104I	TTCGAA	1 cut(s)	685
BspT107I	GGYRCC	6 cut(s)	132, 143, 778, 916, 938, 1613
BspTI	CTTAAG	1 cut(s)	1739
BsrFI	RCCGGY	1 cut(s)	499
BssAI	RCCGGY	1 cut(s)	499
BssMI	GATC	5 cut(s)	531, 1144, 1525, 1596, 1637
BssNI	GRCGYC	3 cut(s)	144, 564, 779
BssT1I	CCWWGG	3 cut(s)	147, 721, 750
Bst2UI	CCWGG	4 cut(s)	864, 922, 968, 1624
Bst4CI	ACNGT	5 cut(s)	790, 1032, 1377, 1653, 1771
BstACI	GRCGYC	3 cut(s)	144, 564, 779
BstAFI	CTTAAG	1 cut(s)	1739
BstBI	TTCGAA	1 cut(s)	685
BstC8I	GCNNGC	7 cut(s)	46, 156, 194, 695, 805, 1256, 1408
BstDEI	CTNAG	7 cut(s)	128, 930, 1053, 1212, 1249, 1689, 1863
BstDSI	CCRYGG	2 cut(s)	721, 1530
BstF5I	GGATG	7 cut(s)	331, 379, 454, 661, 766, 835, 1720
BstFNI	CGCG	2 cut(s)	1410, 1749
BstH2I	RGCGCY	2 cut(s)	147, 782
BstHHI	GCGC	3 cut(s)	146, 781, 1206
BstKTI	GATC	5 cut(s)	534, 1147, 1528, 1599, 1640
BstMBI	GATC	5 cut(s)	531, 1144, 1525, 1596, 1637
BstMWI	GCNNNNNNNGC	7 cut(s)	97, 130, 561, 826, 841, 1013, 1567
BstNI	CCWGG	4 cut(s)	864, 922, 968, 1624
BstNSI	RCATGY	3 cut(s)	1238, 1631, 1709
BstSLI	GKGCMC	3 cut(s)	608, 921, 1171
BstUI	CGCG	2 cut(s)	1410, 1749
BstV1I	GCAGC	8 cut(s)	136, 660, 663, 846, 856, 1036, 1270, 1579
BstX2I	RGATCY	5 cut(s)	531, 1144, 1525, 1596, 1637
BstXI	CCANNNNNNTGG	1 cut(s)	154
BstYI	RGATCY	5 cut(s)	531, 1144, 1525, 1596, 1637
BsuRI	GGCC	7 cut(s)	158, 176, 606, 749, 1191, 1254, 1381
BtgI	CCRYGG	2 cut(s)	721, 1530
BtgZI	GCGATG	2 cut(s)	441, 587
BtsCI	GGATG	7 cut(s)	331, 379, 454, 661, 766, 835, 1720
BtsI	GCAGTG	2 cut(s)	1443, 1470
BtsIMutI	CAGTG	5 cut(s)	1028, 1209, 1382, 1443, 1470
Cac8I	GCNNGC	7 cut(s)	46, 156, 194, 695, 805, 1256, 1408
CciI	TCATGA	1 cut(s)	1456
CfoI	GCGC	3 cut(s)	146, 781, 1206
Cfr10I	RCCGGY	1 cut(s)	499
Cfr13I	GGNCC	9 cut(s)	604, 605, 718, 747, 947, 964, 1189, 1354, 1817
CseI	GACGC	1 cut(s)	553
Csp6I	GTAC	4 cut(s)	497, 1232, 1452, 1614
CviAII	CATG	9 cut(s)	722, 1193, 1235, 1429, 1457, 1544, 1628, 1706, 1802
CviQI	GTAC	4 cut(s)	497, 1232, 1452, 1614
DdeI	CTNAG	7 cut(s)	128, 930, 1053, 1212, 1249, 1689, 1863
DinI	GGCGCC	2 cut(s)	145, 780
DpnI	GATC	5 cut(s)	533, 1146, 1527, 1598, 1639
DpnII	GATC	5 cut(s)	531, 1144, 1525, 1596, 1637
DraI	TTTAAA	2 cut(s)	1539, 1830
EaeI	YGGCCR	1 cut(s)	1379
EciI	GGCGGA	1 cut(s)	570
Eco130I	CCWWGG	3 cut(s)	147, 721, 750
Eco24I	GRGCYC	4 cut(s)	67, 608, 1009, 1864
Eco47I	GGWCC	5 cut(s)	718, 947, 964, 1354, 1817
EcoO109I	RGGNCCY	2 cut(s)	604, 947
EcoRI	GAATTC	2 cut(s)	667, 1514
EcoRII	CCWGG	4 cut(s)	862, 920, 966, 1622
EcoT14I	CCWWGG	3 cut(s)	147, 721, 750
EcoT38I	GRGCYC	4 cut(s)	67, 608, 1009, 1864
EgeI	GGCGCC	2 cut(s)	145, 780
EheI	GGCGCC	2 cut(s)	145, 780
ErhI	CCWWGG	3 cut(s)	147, 721, 750
FaeI	CATG	9 cut(s)	725, 1196, 1238, 1432, 1460, 1547, 1631, 1709, 1805
FalI	AAGNNNNNCTT	2 cut(s)	1382, 1414
FaqI	GGGAC	5 cut(s)	563, 632, 731, 799, 933
FatI	CATG	9 cut(s)	721, 1192, 1234, 1428, 1456, 1543, 1627, 1705, 1801
FauI	CCCGC	2 cut(s)	573, 1403
FokI	GGATG	7 cut(s)	338, 386, 461, 668, 773, 822, 1727
FriOI	GRGCYC	4 cut(s)	67, 608, 1009, 1864
FspBI	CTAG	1 cut(s)	980
GlaI	GCGC	3 cut(s)	145, 780, 1205
GsaI	CCCAGC	1 cut(s)	711
GsuI	CTGGAG	3 cut(s)	251, 885, 989
HaeII	RGCGCY	2 cut(s)	147, 782
HaeIII	GGCC	7 cut(s)	158, 176, 606, 749, 1191, 1254, 1381
HapII	CCGG	9 cut(s)	136, 500, 523, 612, 782, 839, 903, 1151, 1174
HgaI	GACGC	1 cut(s)	553
HhaI	GCGC	3 cut(s)	146, 781, 1206
Hin1I	GRCGYC	3 cut(s)	144, 564, 779
Hin1II	CATG	9 cut(s)	725, 1196, 1238, 1432, 1460, 1547, 1631, 1709, 1805
Hin6I	GCGC	3 cut(s)	144, 779, 1204
HinP1I	GCGC	3 cut(s)	144, 779, 1204
HinfI	GANTC	9 cut(s)	260, 359, 464, 1124, 1414, 1685, 1698, 1735, 1805
HpaII	CCGG	9 cut(s)	136, 500, 523, 612, 782, 839, 903, 1151, 1174
HphI	GGTGA	5 cut(s)	451, 467, 473, 517, 1775
Hpy166II	GTNNAC	3 cut(s)	1157, 1169, 1729
Hpy188I	TCNGA	9 cut(s)	167, 244, 259, 364, 469, 1184, 1520, 1662, 1690
Hpy188III	TCNNGA	8 cut(s)	612, 950, 1289, 1310, 1361, 1390, 1457, 1641
Hpy8I	GTNNAC	3 cut(s)	1157, 1169, 1729
Hpy99I	CGWCG	4 cut(s)	167, 320, 569, 1132
HpyCH4III	ACNGT	5 cut(s)	790, 1032, 1377, 1653, 1771
HpyCH4IV	ACGT	1 cut(s)	537
HpyF10VI	GCNNNNNNNGC	7 cut(s)	97, 130, 561, 826, 841, 1013, 1567
HpyF3I	CTNAG	7 cut(s)	128, 930, 1053, 1212, 1249, 1689, 1863
HpySE526I	ACGT	1 cut(s)	537
Hsp92I	GRCGYC	3 cut(s)	144, 564, 779
Hsp92II	CATG	9 cut(s)	725, 1196, 1238, 1432, 1460, 1547, 1631, 1709, 1805
HspAI	GCGC	3 cut(s)	144, 779, 1204
KasI	GGCGCC	2 cut(s)	143, 778
KflI	GGGWCCC	1 cut(s)	947
Kpn2I	TCCGGA	1 cut(s)	611
KpnI	GGTACC	1 cut(s)	1617
Kzo9I	GATC	5 cut(s)	531, 1144, 1525, 1596, 1637
LmnI	GCTCC	5 cut(s)	151, 826, 970, 1004, 1494
Lsp1109I	GCAGC	8 cut(s)	136, 660, 663, 846, 856, 1036, 1270, 1579
LweI	GCATC	5 cut(s)	564, 844, 1267, 1354, 1705
MaeI	CTAG	1 cut(s)	980
MaeII	ACGT	1 cut(s)	537
MaeIII	GTNAC	3 cut(s)	353, 1501, 1763
MalI	GATC	5 cut(s)	533, 1146, 1527, 1598, 1639
MboI	GATC	5 cut(s)	531, 1144, 1525, 1596, 1637
MboII	GAAGA	7 cut(s)	72, 298, 341, 389, 541, 1535, 1707
MflI	RGATCY	5 cut(s)	531, 1144, 1525, 1596, 1637
MhlI	GDGCHC	6 cut(s)	67, 608, 921, 1009, 1171, 1864
MlsI	TGGCCA	1 cut(s)	1381
MluNI	TGGCCA	1 cut(s)	1381
Mly113I	GGCGCC	2 cut(s)	144, 779
MlyI	GAGTC	2 cut(s)	269, 1118
MmeI	TCCRAC	5 cut(s)	145, 804, 942, 973, 1726
Mox20I	TGGCCA	1 cut(s)	1381
MroI	TCCGGA	1 cut(s)	611
MscI	TGGCCA	1 cut(s)	1381
MseI	TTAA	7 cut(s)	897, 1344, 1538, 1584, 1740, 1829, 1869
Msp20I	TGGCCA	1 cut(s)	1381
MspA1I	CMGCKG	1 cut(s)	1611
MspCI	CTTAAG	1 cut(s)	1739
MspI	CCGG	9 cut(s)	136, 500, 523, 612, 782, 839, 903, 1151, 1174
Mva1269I	GAATGC	1 cut(s)	892
MvaI	CCWGG	4 cut(s)	864, 922, 968, 1624
MvnI	CGCG	2 cut(s)	1410, 1749
MwoI	GCNNNNNNNGC	7 cut(s)	97, 130, 561, 826, 841, 1013, 1567
NarI	GGCGCC	2 cut(s)	144, 779
NciI	CCSGG	6 cut(s)	524, 783, 840, 904, 1152, 1175
NcoI	CCATGG	1 cut(s)	721
NdeII	GATC	5 cut(s)	531, 1144, 1525, 1596, 1637
NlaIII	CATG	9 cut(s)	725, 1196, 1238, 1432, 1460, 1547, 1631, 1709, 1805
NmeAIII	GCCGAG	1 cut(s)	967
NmuCI	GTSAC	2 cut(s)	1501, 1763
NspI	RCATGY	3 cut(s)	1238, 1631, 1709
NspV	TTCGAA	1 cut(s)	685
PagI	TCATGA	1 cut(s)	1456
PciI	ACATGT	2 cut(s)	1234, 1705
PcsI	WCGNNNNNNNCGW	1 cut(s)	677
PctI	GAATGC	1 cut(s)	892
PfeI	GAWTC	7 cut(s)	359, 464, 1414, 1685, 1698, 1735, 1805
PflMI	CCANNNNNTGG	1 cut(s)	1623
PleI	GAGTC	2 cut(s)	268, 1118
PluTI	GGCGCC	2 cut(s)	147, 782
PpsI	GAGTC	2 cut(s)	268, 1118
PpuMI	RGGWCCY	1 cut(s)	947
PscI	ACATGT	2 cut(s)	1234, 1705
PshBI	ATTAAT	1 cut(s)	1584
PsiI	TTATAA	1 cut(s)	1043
Psp5II	RGGWCCY	1 cut(s)	947
Psp6I	CCWGG	4 cut(s)	862, 920, 966, 1622
PspFI	CCCAGC	1 cut(s)	707
PspGI	CCWGG	4 cut(s)	862, 920, 966, 1622
PspOMI	GGGCCC	1 cut(s)	604
PspPI	GGNCC	9 cut(s)	604, 605, 718, 747, 947, 964, 1189, 1354, 1817
PspPPI	RGGWCCY	1 cut(s)	947
PsuI	RGATCY	5 cut(s)	531, 1144, 1525, 1596, 1637
RsaI	GTAC	4 cut(s)	498, 1233, 1453, 1615
RsaNI	GTAC	4 cut(s)	497, 1232, 1452, 1614
SaqAI	TTAA	7 cut(s)	897, 1344, 1538, 1584, 1740, 1829, 1869
Sau3AI	GATC	5 cut(s)	531, 1144, 1525, 1596, 1637
Sau96I	GGNCC	9 cut(s)	604, 605, 718, 747, 947, 964, 1189, 1354, 1817
SchI	GAGTC	2 cut(s)	269, 1118
SduI	GDGCHC	6 cut(s)	67, 608, 921, 1009, 1171, 1864
SfaNI	GCATC	5 cut(s)	564, 844, 1267, 1354, 1705
SfoI	GGCGCC	2 cut(s)	145, 780
SfuI	TTCGAA	1 cut(s)	685
SinI	GGWCC	5 cut(s)	718, 947, 964, 1354, 1817
SmiI	ATTTAAAT	1 cut(s)	1539
SmlI	CTYRAG	1 cut(s)	1739
SmoI	CTYRAG	1 cut(s)	1739
SspDI	GGCGCC	2 cut(s)	143, 778
SspMI	CTAG	1 cut(s)	980
StyI	CCWWGG	3 cut(s)	147, 721, 750
SwaI	ATTTAAAT	1 cut(s)	1539
TaaI	ACNGT	5 cut(s)	790, 1032, 1377, 1653, 1771
TaiI	ACGT	1 cut(s)	540
TaqI	TCGA	4 cut(s)	61, 662, 685, 1127
TaqII	GACCGA	1 cut(s)	1520
TauI	GCSGC	2 cut(s)	199, 580
TfiI	GAWTC	7 cut(s)	359, 464, 1414, 1685, 1698, 1735, 1805
Tru1I	TTAA	7 cut(s)	897, 1344, 1538, 1584, 1740, 1829, 1869
Tru9I	TTAA	7 cut(s)	897, 1344, 1538, 1584, 1740, 1829, 1869
TscAI	CASTG	5 cut(s)	1035, 1216, 1382, 1443, 1477
TseFI	GTSAC	2 cut(s)	1501, 1763
TseI	GCWGC	8 cut(s)	124, 673, 676, 844, 859, 1049, 1258, 1567
Tsp45I	GTSAC	2 cut(s)	1501, 1763
TspDTI	ATGAA	3 cut(s)	342, 390, 680
TspGWI	ACGGA	2 cut(s)	151, 636
TspRI	CASTG	5 cut(s)	1035, 1216, 1382, 1443, 1477
Van91I	CCANNNNNTGG	1 cut(s)	1623
Vha464I	CTTAAG	1 cut(s)	1739
VneI	GTGCAC	1 cut(s)	1167
VpaK11BI	GGWCC	5 cut(s)	718, 947, 964, 1354, 1817
VspI	ATTAAT	1 cut(s)	1584
XapI	RAATTY	5 cut(s)	442, 667, 1265, 1514, 1825
XceI	RCATGY	3 cut(s)	1238, 1631, 1709
XcmI	CCANNNNNNNNNTGG	1 cut(s)	271
XspI	CTAG	1 cut(s)	980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.